CsaV3_1G033480 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G033480
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	protein DEFECTIVE IN MERISTEM SILENCING 3
Location	chr1 : 20556258 .. 20559881 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGCCTTGGATTTTACAACACACAACACATACCGAGAGATTACTCAACAAACCCACCTCAGGTTCTTCTCTCTCTTTTTCATTCAACCTTAATCTTTTGTTGTAGGAAAGAAGAAAAACTTTGATGATTTGCAGTATTTTACAACTTAAAAGTTAAACCAAACCTGGAAAGAGTTTTTTTTGCGGGGTTTTGCAACCAAGACAAAGAATCTTCTTGAAGAAGAAGAAACAGAACTTTGCTTTCTCTCAACACTCTCTTCTTATTTTCAGATATGTATTCTTTTATGATGAAACTGGATGAGTTTGACAATGATAAAGTACCTAAAGATGAAATGCAAGATGTTGCGCTCTCTCATGAAGATCAAATTAATCTTCATTCCAAGGTACTTTAACATGTTCGTTAGATTATGAGTTTAATGAGAGGAGTTAATAAAGTTGTTTGTGTTCATTTTGTTCTATGTAGAAACTTCAAGATGATTTGCAAACAATGGGGATGAAAATACAGGTGCATGAAGACAACATAAGGTTTCTGAAGACTTTGAAAGACAAATTAGTTGATTCCATCATTGATCTACAGGGTATTTTGTTTTTTTCTCCTTCTTGAACAAGTAGATCTTCAAGACATTTTTATGTCATTTCCATTACTTAGATAAGTTTCTATTGCAGTTATATTAGATAAGCATCATGCTTCTAATACACCTAAGATTGAGAACAAGGATGGTTCCGATACTCAAAGTGAAGATAAGGCATCATATCAGAAAGAGATATTACAACAGGAAAATACTGCTGCTAGCATCTTGTGCCACTCAAAAACTAATCCAAAGATGCTGGCTTCTGATCCTACATTGAGTGATGATGTGCTTGGTGTTGTTGCTGAGCTAGGACATGTGGAGGACAAAAACCTTAGCAGGTCTCTTTTGCTTCTCATCTTTTAAGTAATCATCTAGTCTCATGTTAATTTTCACTGACATGCATTGTTTTGAAACCGACAGACAAAGAAATTAGAAAACGTAAAGAGTAGAGAAATTAACTTAGAGATTTTACCTGGTACATTAATAGTATGTTCGAGGCGGGACCAATAAAAACTTCATGCATAATTTTTTTTTCTTTGAAAGTGAAGGTTGATGACAATGCCATTAGCCTTGGGGGTGGGATCATCTACTGTCCTTGAATGTAGAGGCAAACATTAGATTTGAACATACTAGGTAATTCATTTTAGGGTATGTTATCGTTTTAGTTTATGGTTTTTGTTTGAAAGGGTATTGGAAGTATTCATTACTTGTCTCGTCGTCTTGGTAAAATCTCTCAAATTGTCCATCATTACTAGAAATTACAATTTTGGCACGTGCTTTTGGATGTGGTAGTGAGACAATGAGCTCTAATATTCAGTACTTAGTATACCATGTCCAAGTAAATTATTAACAACCGCGTTACACGAGACTTAACCAAACTATAGGGGCCAAATTTAAAAACTTTGCACGAACCACCTGTTCTGCAGTTGTATAACCTTCATTTTGTTACTAACATTTTGCCACTATCATCTAGTAAGGTCACAAGTTGAATTTGAGCTTAAAGATAGGTGTTTCATAACACAAGGATGTGGTTTGTTCTTAGCAATAGATTTGTAGATATAGACCGTTTAACAAGAGATGGATATTGGGTATTTTAGTGTTATTTAGGAGAATAACTCATATTTGAAGATAGTTAACAAAGAATGTGACCATTCTATACTTTGATCTATATGTTCTTTCTTTTTTGGTTTCTGGTTTGGATTGCAGCCTTTTATCAGAGTACCTAGGAACAGAGACCATGTTGGCTATTGTCTGCAAGACTTACAATGGAGTCAAATCTCTGGAAAAGTATGACACGGAAGGATGCATAAATGAAACATCCGGGCTTCATGGATTTGGCACTTCACTCGGGAAAACTTTAGAGGGACGATTCAATGTCATCTCTCTCGAAACGTTAAGGTATTCATTTCTTTCTTTCTGACATGGGGCGGTTATTTGGACATTCTAGCACATAAATATTGTGGAACTCTTCTCTTACTGAGAACTCAACACACTCTTTTGGTTTCTTTTGCCTGTGCAGATCATATTCTGGTGAATTTGTGGCCAATGATCCGCAAAGAAGGCTTCATATTCCAAAGCCAAGATTGCCTAATGGAGACTGTCCAGCCGGTTTTCTTGGTTATGCTGTTAATATGATTGACATAGACAGAACACACTTGTTTTTTCTCACAGCTAGTGGATATGGTCTTAGAGAGACTCTATTTTATTCTCTATTTTTCTGCCTGCAAATCTATAAAACTAGGACAGAAATGTTGCAAGCTGTTCCCTTTATAACCGACGGAGCGCTTTCTTTGGATGGCGGGATTATCAAGAGGAGTGGATTGTTTTGTCTTGGCAATAGGTACGAAGCACATCTTGACAATCTCAATGATTAGTCAGTTATGGATTCAAATCTCTACCTGGGGGGACGTGGTCCTTGTCCAAGCACTTGGGTTTCTCTGTTTATGGTATATTTACTTTTATGCCTGCTAAACATGTTAGGGGCGACACGAAGGTGACCTTTTCCAAGACCTCAATAGATTTAAGCCTACCTGACCAGTACATGGAATCTGAAAGACAAATGAAAGAAATGAAATGGAAAGAGGAAAAAATGCTTGAAGATATGAGGAGAGAACAGGTGCTGCTAGATACCTTGAAGCTCAACTTCGAAAAAAAGAAGGCAGAGTTTGTGCAGTTTCTAGCAGAAGCTGCTGCTCGGGTAAGCACCAATCCAACTAACAAACATGACATAAACTATGAAAAATGGCCTTTGCATTTAACATTAATTTGCAACATCCTAGCTTCGGTCTTTTGATTTTGTTTGGCATCATTTACTTTCCTTTTTGCTTCCTTGTACCGAAATCTTGTTCATGTGACATGGCCATCATTAAACTGTTGAATGAGTTGGTCCAGAATGAACTGTGTTCTAAACAAACCGTCACTAGTCTTTGTCATGAATGTGCTATTGTCTCTTTTGAACTTGTATGAGTATTTTACAAGGTCTGTTAGTTCAATATGGCCATTGTCATGTATTCTTCAGTTTTCTAACTTGTATATTGTTCATTAAACTAAGTAATTTCTTACACACTGGCAGCCACAAACTCCAGTCGGGGAGACTAGTCGATAGATGATTCCAGACAGAGAATCAACCAACCATCGAAGGGATGGCTAATTGGCTACATGTTTTGGAAGTTTCAGGGTTGATGCTCGTTGTTGTCGATCACGTTTCACACACGATGGAATTGTTTTGTTGTATGATATGCATCAGTGTTGGATAGGTGATGGCTTATTCTGGGGGGGTTTGAAGGAAATAGGAATATTTTGCAATACCAAGTTTGTGTTGTGTATGACGCTTCCTCTGACAGCTCTATGATGGTTGCCATTTCTTTCATCCTCTTTCTCTCTTGCTTTGCTTACCTTCCTGTTTTATGGGCCATTTATCTGTTGACAAAATGGTGGATGTATTCTGCATGTTTACTTCGACCCTGGATTCAAAGTTGGATTCTCAGCCAAGCTCGAGAGTATATGCCTTAACCGTTGTTTTACAATTGCAATCCGGTAATGTCTAGGCGTC

mRNA sequence

ATGTATTCTTTTATGATGAAACTGGATGAGTTTGACAATGATAAAGTACCTAAAGATGAAATGCAAGATGTTGCGCTCTCTCATGAAGATCAAATTAATCTTCATTCCAAGAAACTTCAAGATGATTTGCAAACAATGGGGATGAAAATACAGGTGCATGAAGACAACATAAGGTTTCTGAAGACTTTGAAAGACAAATTAGTTGATTCCATCATTGATCTACAGGTTATATTAGATAAGCATCATGCTTCTAATACACCTAAGATTGAGAACAAGGATGGTTCCGATACTCAAAGTGAAGATAAGGCATCATATCAGAAAGAGATATTACAACAGGAAAATACTGCTGCTAGCATCTTGTGCCACTCAAAAACTAATCCAAAGATGCTGGCTTCTGATCCTACATTGAGTGATGATGTGCTTGGTGTTGTTGCTGAGCTAGGACATGTGGAGGACAAAAACCTTAGCAGCCTTTTATCAGAGTACCTAGGAACAGAGACCATGTTGGCTATTGTCTGCAAGACTTACAATGGAGTCAAATCTCTGGAAAAGTATGACACGGAAGGATGCATAAATGAAACATCCGGGCTTCATGGATTTGGCACTTCACTCGGGAAAACTTTAGAGGGACGATTCAATGTCATCTCTCTCGAAACGTTAAGATCATATTCTGGTGAATTTGTGGCCAATGATCCGCAAAGAAGGCTTCATATTCCAAAGCCAAGATTGCCTAATGGAGACTGTCCAGCCGGTTTTCTTGGTTATGCTGTTAATATGATTGACATAGACAGAACACACTTGTTTTTTCTCACAGCTAGTGGATATGGTCTTAGAGAGACTCTATTTTATTCTCTATTTTTCTGCCTGCAAATCTATAAAACTAGGACAGAAATGTTGCAAGCTGTTCCCTTTATAACCGACGGAGCGCTTTCTTTGGATGGCGGGATTATCAAGAGGAGTGGATTGTTTTGTCTTGGCAATAGGGGCGACACGAAGGTGACCTTTTCCAAGACCTCAATAGATTTAAGCCTACCTGACCAGTACATGGAATCTGAAAGACAAATGAAAGAAATGAAATGGAAAGAGGAAAAAATGCTTGAAGATATGAGGAGAGAACAGGTGCTGCTAGATACCTTGAAGCTCAACTTCGAAAAAAAGAAGGCAGAGTTTGTGCAGTTTCTAGCAGAAGCTGCTGCTCGGCCACAAACTCCAGTCGGGGAGACTAGTCGATAG

Coding sequence (CDS)

ATGTATTCTTTTATGATGAAACTGGATGAGTTTGACAATGATAAAGTACCTAAAGATGAAATGCAAGATGTTGCGCTCTCTCATGAAGATCAAATTAATCTTCATTCCAAGAAACTTCAAGATGATTTGCAAACAATGGGGATGAAAATACAGGTGCATGAAGACAACATAAGGTTTCTGAAGACTTTGAAAGACAAATTAGTTGATTCCATCATTGATCTACAGGTTATATTAGATAAGCATCATGCTTCTAATACACCTAAGATTGAGAACAAGGATGGTTCCGATACTCAAAGTGAAGATAAGGCATCATATCAGAAAGAGATATTACAACAGGAAAATACTGCTGCTAGCATCTTGTGCCACTCAAAAACTAATCCAAAGATGCTGGCTTCTGATCCTACATTGAGTGATGATGTGCTTGGTGTTGTTGCTGAGCTAGGACATGTGGAGGACAAAAACCTTAGCAGCCTTTTATCAGAGTACCTAGGAACAGAGACCATGTTGGCTATTGTCTGCAAGACTTACAATGGAGTCAAATCTCTGGAAAAGTATGACACGGAAGGATGCATAAATGAAACATCCGGGCTTCATGGATTTGGCACTTCACTCGGGAAAACTTTAGAGGGACGATTCAATGTCATCTCTCTCGAAACGTTAAGATCATATTCTGGTGAATTTGTGGCCAATGATCCGCAAAGAAGGCTTCATATTCCAAAGCCAAGATTGCCTAATGGAGACTGTCCAGCCGGTTTTCTTGGTTATGCTGTTAATATGATTGACATAGACAGAACACACTTGTTTTTTCTCACAGCTAGTGGATATGGTCTTAGAGAGACTCTATTTTATTCTCTATTTTTCTGCCTGCAAATCTATAAAACTAGGACAGAAATGTTGCAAGCTGTTCCCTTTATAACCGACGGAGCGCTTTCTTTGGATGGCGGGATTATCAAGAGGAGTGGATTGTTTTGTCTTGGCAATAGGGGCGACACGAAGGTGACCTTTTCCAAGACCTCAATAGATTTAAGCCTACCTGACCAGTACATGGAATCTGAAAGACAAATGAAAGAAATGAAATGGAAAGAGGAAAAAATGCTTGAAGATATGAGGAGAGAACAGGTGCTGCTAGATACCTTGAAGCTCAACTTCGAAAAAAAGAAGGCAGAGTTTGTGCAGTTTCTAGCAGAAGCTGCTGCTCGGCCACAAACTCCAGTCGGGGAGACTAGTCGATAG

Protein sequence

MYSFMMKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTLKDKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQENTAASILCHSKTNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEEKMLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQTPVGETSR

Homology

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BLAST of CsaV3_1G033480 vs. NCBI nr
Match: KGN65652.1 (hypothetical protein Csa_1G478600 [Cucumis sativus])

HSP 1 Score: 788.5 bits (2035), Expect = 1.1e-224
Identity = 401/406 (98.77%), Postives = 403/406 (99.26%), Query Frame = 0


Query: 5   MMKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTLK 64
           MMKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTLK
Sbjct: 1   MMKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTLK 60

Query: 65  DKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQENTAASILCHSK 124
           DKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSED+ SYQK ILQQENTAASILCHSK
Sbjct: 61  DKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDEPSYQKGILQQENTAASILCHSK 120

Query: 125 TNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLEK 184
           TNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLEK
Sbjct: 121 TNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLEK 180

Query: 185 YDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLP 244
           YDTEGCINETSGLHGFGTSLGKTLEGRFNVI+LETLRSYSGEFVANDPQRRLHIPKPRLP
Sbjct: 181 YDTEGCINETSGLHGFGTSLGKTLEGRFNVIALETLRSYSGEFVANDPQRRLHIPKPRLP 240

Query: 245 NGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPF 304
           NGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP 
Sbjct: 241 NGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPC 300

Query: 305 ITDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEEK 364
           ITDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEEK
Sbjct: 301 ITDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEEK 360

Query: 365 MLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQTPVGETSR 411
           MLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQTPVGETSR
Sbjct: 361 MLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQTPVGETSR 406

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BLAST of CsaV3_1G033480 vs. NCBI nr
Match: KGN57665.1 (hypothetical protein Csa_3G239290 [Cucumis sativus])

HSP 1 Score: 734.2 bits (1894), Expect = 2.5e-208
Identity = 374/405 (92.35%), Postives = 388/405 (95.80%), Query Frame = 0


Query: 1   MYSFMMKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFL 60
           +YSF MKLDEFDN KVPKDEMQDVALSHED I+LHSKKLQDDLQTMGMKIQ+HEDNIRFL
Sbjct: 57  LYSFTMKLDEFDNYKVPKDEMQDVALSHEDPISLHSKKLQDDLQTMGMKIQLHEDNIRFL 116

Query: 61  KTLKDKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQENTAASIL 120
           KTLKDKLVDSIIDLQV L K+HASNTPKIENKDGSDTQSED+ SYQK ILQQENTAASIL
Sbjct: 117 KTLKDKLVDSIIDLQVTLGKYHASNTPKIENKDGSDTQSEDEPSYQKGILQQENTAASIL 176

Query: 121 CHSKTNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVK 180
           CHSKTNPKMLASDPTLSDDVLGVVAELGHV+D NLSSLLSEYLGT+TMLAIVCKTYNGVK
Sbjct: 177 CHSKTNPKMLASDPTLSDDVLGVVAELGHVKDNNLSSLLSEYLGTKTMLAIVCKTYNGVK 236

Query: 181 SLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPK 240
           SLEKYDTEGCIN+TSGLHGFGTSLGKTLEGRFNVI+LETLRSYSGEFVA+DPQRRL IPK
Sbjct: 237 SLEKYDTEGCINKTSGLHGFGTSLGKTLEGRFNVIALETLRSYSGEFVADDPQRRLDIPK 296

Query: 241 PRLPNGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQ 300
           PRLPNGDCP GFLGYAVNMIDIDRTHL FLTASGYGLRETLFYSLFFCLQIYKTRTEMLQ
Sbjct: 297 PRLPNGDCPDGFLGYAVNMIDIDRTHLSFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQ 356

Query: 301 AVPFITDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKW 360
           AVP ITDGALSLDGGIIKRSGLFCLGNRGD KVTFSKTSI+ SLPD YMESERQMKEMKW
Sbjct: 357 AVPCITDGALSLDGGIIKRSGLFCLGNRGDAKVTFSKTSINSSLPDHYMESERQMKEMKW 416

Query: 361 KEEKMLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQTPV 406
           K+EK+LEDMRREQ LLD+LKLNFEKKKAE VQFLAEAAARPQTPV
Sbjct: 417 KKEKLLEDMRREQALLDSLKLNFEKKKAEIVQFLAEAAARPQTPV 461

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BLAST of CsaV3_1G033480 vs. NCBI nr
Match: XP_004146267.2 (PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 [Cucumis sativus])

HSP 1 Score: 727.2 bits (1876), Expect = 3.0e-206
Identity = 371/400 (92.75%), Postives = 384/400 (96.00%), Query Frame = 0


Query: 6   MKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTLKD 65
           MKLDEFDN KVPKDEMQDVALSHED I+LHSKKLQDDLQTMGMKIQ+HEDNIRFLKTLKD
Sbjct: 1   MKLDEFDNYKVPKDEMQDVALSHEDPISLHSKKLQDDLQTMGMKIQLHEDNIRFLKTLKD 60

Query: 66  KLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQENTAASILCHSKT 125
           KLVDSIIDLQV L K+HASNTPKIENKDGSDTQSED+ SYQK ILQQENTAASILCHSKT
Sbjct: 61  KLVDSIIDLQVTLGKYHASNTPKIENKDGSDTQSEDEPSYQKGILQQENTAASILCHSKT 120

Query: 126 NPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLEKY 185
           NPKMLASDPTLSDDVLGVVAELGHV+D NLSSLLSEYLGT+TMLAIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTLSDDVLGVVAELGHVKDNNLSSLLSEYLGTKTMLAIVCKTYNGVKSLEKY 180

Query: 186 DTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPN 245
           DTEGCIN+TSGLHGFGTSLGKTLEGRFNVI+LETLRSYSGEFVA+DPQRRL IPKPRLPN
Sbjct: 181 DTEGCINKTSGLHGFGTSLGKTLEGRFNVIALETLRSYSGEFVADDPQRRLDIPKPRLPN 240

Query: 246 GDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFI 305
           GDCP GFLGYAVNMIDIDRTHL FLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP I
Sbjct: 241 GDCPDGFLGYAVNMIDIDRTHLSFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPCI 300

Query: 306 TDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEEKM 365
           TDGALSLDGGIIKRSGLFCLGNRGD KVTFSKTSI+ SLPD YMESERQMKEMKWK+EK+
Sbjct: 301 TDGALSLDGGIIKRSGLFCLGNRGDAKVTFSKTSINSSLPDHYMESERQMKEMKWKKEKL 360

Query: 366 LEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQTPV 406
           LEDMRREQ LLD+LKLNFEKKKAE VQFLAEAAARPQTPV
Sbjct: 361 LEDMRREQALLDSLKLNFEKKKAEIVQFLAEAAARPQTPV 400

[Close]

BLAST of CsaV3_1G033480 vs. NCBI nr
Match: XP_008466829.1 (PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 [Cucumis melo])

HSP 1 Score: 713.8 bits (1841), Expect = 3.4e-202
Identity = 364/400 (91.00%), Postives = 380/400 (95.00%), Query Frame = 0


Query: 6   MKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTLKD 65
           MKL+EFDN KVPKDEMQDV LSHED INLHSKKLQDDLQTMGMKIQ+HEDNIRFL+TLKD
Sbjct: 1   MKLEEFDNFKVPKDEMQDVELSHEDPINLHSKKLQDDLQTMGMKIQLHEDNIRFLRTLKD 60

Query: 66  KLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQENTAASILCHSKT 125
           KLVDSIIDLQVIL K+HASN+PKIENKDGSDTQSEDK SYQK ILQQEN+AASILCH KT
Sbjct: 61  KLVDSIIDLQVILGKYHASNSPKIENKDGSDTQSEDKPSYQKAILQQENSAASILCHLKT 120

Query: 126 NPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLEKY 185
           NPKMLASDPT+S+DVLGVVAELGHVED  LSSLLSEYLGTETM AIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTMSEDVLGVVAELGHVEDDTLSSLLSEYLGTETMSAIVCKTYNGVKSLEKY 180

Query: 186 DTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPN 245
           DT+G IN+TSGLHGFGTSLGKTLEGRFNVISLETLR YSGEFVA+DPQRRL IPKPRLPN
Sbjct: 181 DTDGGINKTSGLHGFGTSLGKTLEGRFNVISLETLRPYSGEFVADDPQRRLDIPKPRLPN 240

Query: 246 GDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFI 305
           GDCPAGFLGYAVNMI+IDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP I
Sbjct: 241 GDCPAGFLGYAVNMINIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPCI 300

Query: 306 TDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEEKM 365
           TDGALSLDGGIIKRSGLFCLGNRGD K TFSKTS + SLPD YMESERQMKEMKWK+EKM
Sbjct: 301 TDGALSLDGGIIKRSGLFCLGNRGDMKATFSKTSTNSSLPDHYMESERQMKEMKWKKEKM 360

Query: 366 LEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQTPV 406
           LEDMRRE+ LLD+LKLNFEKKKAEFVQFLAEAAARPQTPV
Sbjct: 361 LEDMRRERALLDSLKLNFEKKKAEFVQFLAEAAARPQTPV 400

[Close]

BLAST of CsaV3_1G033480 vs. NCBI nr
Match: ADN33744.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 703.0 bits (1813), Expect = 6.1e-199
Identity = 359/395 (90.89%), Postives = 375/395 (94.94%), Query Frame = 0


Query: 6   MKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTLKD 65
           MKL+EFDN KVPKDEMQDV LSHED INLHSKKLQDDLQTMGMKIQ+HEDNIRFL+TLKD
Sbjct: 1   MKLEEFDNFKVPKDEMQDVELSHEDPINLHSKKLQDDLQTMGMKIQLHEDNIRFLRTLKD 60

Query: 66  KLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQENTAASILCHSKT 125
           KLVDSIIDLQVIL K+HASN+PKIENKDGSDTQSEDK SYQK ILQQEN+AASILCH KT
Sbjct: 61  KLVDSIIDLQVILGKYHASNSPKIENKDGSDTQSEDKPSYQKAILQQENSAASILCHLKT 120

Query: 126 NPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLEKY 185
           NPKMLASDPT+S+DVLGVVAELGHVED  LSSLLSEYLGTETM AIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTMSEDVLGVVAELGHVEDDTLSSLLSEYLGTETMSAIVCKTYNGVKSLEKY 180

Query: 186 DTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPN 245
           DT+G IN+TSGLHGFGTSLGKTLEGRFNVISLETLR YSGEFVA+DPQRRL IPKPRLPN
Sbjct: 181 DTDGGINKTSGLHGFGTSLGKTLEGRFNVISLETLRPYSGEFVADDPQRRLDIPKPRLPN 240

Query: 246 GDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFI 305
           GDCPAGFLGYAVNMI+IDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP I
Sbjct: 241 GDCPAGFLGYAVNMINIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPCI 300

Query: 306 TDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEEKM 365
           TDGALSLDGGIIKRSGLFCLGNRGD K TFSKTS + SLPD YMESERQMKEMKWK+EKM
Sbjct: 301 TDGALSLDGGIIKRSGLFCLGNRGDMKATFSKTSTNSSLPDHYMESERQMKEMKWKKEKM 360

Query: 366 LEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAAR 401
           LEDMRRE+ LLD+LKLNFEKKKAEFVQFLAEAAAR
Sbjct: 361 LEDMRRERALLDSLKLNFEKKKAEFVQFLAEAAAR 395

[Close]

BLAST of CsaV3_1G033480 vs. TAIR10
Match: AT3G49250.1 (defective in meristem silencing 3)

HSP 1 Score: 362.8 bits (930), Expect = 2.7e-100
Identity = 197/399 (49.37%), Postives = 281/399 (70.43%), Query Frame = 0


Query: 5   MMKLDEFDNDKVPKDEMQD-VALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTL 64
           MM LD+  +  V ++E Q+   ++H +    +SK+L+ DL+ MG KI+ HEDN++FLK+ 
Sbjct: 23  MMNLDQ--SSPVARNETQNGGGIAHAEFAMFNSKRLESDLEAMGNKIKQHEDNLKFLKSQ 82

Query: 65  KDKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQENTAASILCHS 124
           K+K+ ++I+DLQV + K ++S TP+ EN D S  Q ED      +IL+ EN+AA +L   
Sbjct: 83  KNKMDEAIVDLQVHMSKLNSSPTPRSENSDNS-LQGED---INAQILRHENSAAGVLSLV 142

Query: 125 KTNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLE 184
           +T     AS   L+  V+GVVA+LG V D+NLS +LS YLGT +MLA+VC+ Y  V +LE
Sbjct: 143 ETLHGAQASQLMLTKGVVGVVAKLGKVNDENLSQILSNYLGTRSMLAVVCRNYESVTALE 202

Query: 185 KYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRL 244
            YD  G I+  +GLH  G+S+G+ +   F+ I LE LR Y G+ +A+D QRRL + KP+L
Sbjct: 203 AYDNHGNIDINAGLHCLGSSIGREIGDSFDAICLENLRPYVGQHIADDLQRRLDLLKPKL 262

Query: 245 PNGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP 304
           PNG+CP GFLG+AVNMI ID  +L  +T+ GYGLRETLFY+LF  LQ+YKTR +M+ A+P
Sbjct: 263 PNGECPPGFLGFAVNMIQIDPAYLLCVTSYGYGLRETLFYNLFSRLQVYKTRADMISALP 322

Query: 305 FITDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEE 364
            I+DGA+SLDGGII+++G+F LGNR +  V F+K +   ++ D Y E+E++MKE+KWK+E
Sbjct: 323 CISDGAVSLDGGIIRKTGIFNLGNRDEVNVRFAKPTASRTM-DNYSEAEKKMKELKWKKE 382

Query: 365 KMLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQ 403
           K LED++REQVL +    NF KKK EFV+ LA+++   Q
Sbjct: 383 KTLEDIKREQVLREHAVFNFGKKKEEFVRCLAQSSCTNQ 414

[Close]

BLAST of CsaV3_1G033480 vs. TAIR10
Match: AT5G24280.1 (gamma-irradiation and mitomycin c induced 1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-34
Identity = 116/348 (33.33%), Postives = 170/348 (48.85%), Query Frame = 0


Query: 54   EDNIRFLKTLKDKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQE 113
            E+ ++ L+  ++        LQ  L+   A     +  K+    Q E+K           
Sbjct: 1276 EERLKCLQAQREHAEQECSRLQASLEPLGAPFPECLSTKESMMKQIEEK---------HH 1335

Query: 114  NTAASILCHSKTNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVC 173
            +TAAS+ C          S       + GVVA LG V   +LS +LSEYLG +TML++VC
Sbjct: 1336 DTAASVFCCLYRKAPPPRSLFLSQKGMFGVVALLGSVASTSLSRVLSEYLGKDTMLSLVC 1395

Query: 174  KTYN-GVKSLE--KYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVAN 233
            K+   G KS E  K+ +E              SLG+++  RF VI L+  R +    V N
Sbjct: 1396 KSSQFGPKSDEYRKFQSE------------AASLGRSITNRFLVICLDATRPWRNGLVRN 1455

Query: 234  DPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQ 293
            DPQ+RL +  P LPNGD   GF GYAVNMID+    L   ++SGYGLRETLFY +F  LQ
Sbjct: 1456 DPQKRLAMDNPYLPNGDPIPGFKGYAVNMIDLASEELDIQSSSGYGLRETLFYGVFRELQ 1515

Query: 294  IYKTRTEMLQAVPFITDG-ALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYM 353
            +Y+T   +  A+P I  G A+SLDG I + +G    G          +    +++ ++  
Sbjct: 1516 VYETAEHLEAALPHINGGDAVSLDGVIARENGFIYSG------CCTPEVHFPITVTERQE 1575

Query: 354  ESERQMKEMKWKEEKMLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEA 398
            ++  Q++  + K+ K  E M  E   L  L    +K   ++  F A A
Sbjct: 1576 KALVQLEITRDKKRKTEEMMTEENRSLRRLVKKLKKANEKYQNFTAMA 1596

[Close]

BLAST of CsaV3_1G033480 vs. Swiss-Prot
Match: sp|Q94A79|DMS3_ARATH (Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Arabidopsis thaliana OX=3702 GN=DMS3 PE=1 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 4.9e-99
Identity = 197/399 (49.37%), Postives = 281/399 (70.43%), Query Frame = 0


Query: 5   MMKLDEFDNDKVPKDEMQD-VALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTL 64
           MM LD+  +  V ++E Q+   ++H +    +SK+L+ DL+ MG KI+ HEDN++FLK+ 
Sbjct: 23  MMNLDQ--SSPVARNETQNGGGIAHAEFAMFNSKRLESDLEAMGNKIKQHEDNLKFLKSQ 82

Query: 65  KDKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQENTAASILCHS 124
           K+K+ ++I+DLQV + K ++S TP+ EN D S  Q ED      +IL+ EN+AA +L   
Sbjct: 83  KNKMDEAIVDLQVHMSKLNSSPTPRSENSDNS-LQGED---INAQILRHENSAAGVLSLV 142

Query: 125 KTNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLE 184
           +T     AS   L+  V+GVVA+LG V D+NLS +LS YLGT +MLA+VC+ Y  V +LE
Sbjct: 143 ETLHGAQASQLMLTKGVVGVVAKLGKVNDENLSQILSNYLGTRSMLAVVCRNYESVTALE 202

Query: 185 KYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRL 244
            YD  G I+  +GLH  G+S+G+ +   F+ I LE LR Y G+ +A+D QRRL + KP+L
Sbjct: 203 AYDNHGNIDINAGLHCLGSSIGREIGDSFDAICLENLRPYVGQHIADDLQRRLDLLKPKL 262

Query: 245 PNGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP 304
           PNG+CP GFLG+AVNMI ID  +L  +T+ GYGLRETLFY+LF  LQ+YKTR +M+ A+P
Sbjct: 263 PNGECPPGFLGFAVNMIQIDPAYLLCVTSYGYGLRETLFYNLFSRLQVYKTRADMISALP 322

Query: 305 FITDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEE 364
            I+DGA+SLDGGII+++G+F LGNR +  V F+K +   ++ D Y E+E++MKE+KWK+E
Sbjct: 323 CISDGAVSLDGGIIRKTGIFNLGNRDEVNVRFAKPTASRTM-DNYSEAEKKMKELKWKKE 382

Query: 365 KMLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQ 403
           K LED++REQVL +    NF KKK EFV+ LA+++   Q
Sbjct: 383 KTLEDIKREQVLREHAVFNFGKKKEEFVRCLAQSSCTNQ 414

[Close]

BLAST of CsaV3_1G033480 vs. Swiss-Prot
Match: sp|F4KFS5|GMI1_ARATH (Structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 OS=Arabidopsis thaliana OX=3702 GN=GMI1 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.1e-33
Identity = 116/348 (33.33%), Postives = 170/348 (48.85%), Query Frame = 0


Query: 54   EDNIRFLKTLKDKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQE 113
            E+ ++ L+  ++        LQ  L+   A     +  K+    Q E+K           
Sbjct: 1276 EERLKCLQAQREHAEQECSRLQASLEPLGAPFPECLSTKESMMKQIEEK---------HH 1335

Query: 114  NTAASILCHSKTNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVC 173
            +TAAS+ C          S       + GVVA LG V   +LS +LSEYLG +TML++VC
Sbjct: 1336 DTAASVFCCLYRKAPPPRSLFLSQKGMFGVVALLGSVASTSLSRVLSEYLGKDTMLSLVC 1395

Query: 174  KTYN-GVKSLE--KYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVAN 233
            K+   G KS E  K+ +E              SLG+++  RF VI L+  R +    V N
Sbjct: 1396 KSSQFGPKSDEYRKFQSE------------AASLGRSITNRFLVICLDATRPWRNGLVRN 1455

Query: 234  DPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQ 293
            DPQ+RL +  P LPNGD   GF GYAVNMID+    L   ++SGYGLRETLFY +F  LQ
Sbjct: 1456 DPQKRLAMDNPYLPNGDPIPGFKGYAVNMIDLASEELDIQSSSGYGLRETLFYGVFRELQ 1515

Query: 294  IYKTRTEMLQAVPFITDG-ALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYM 353
            +Y+T   +  A+P I  G A+SLDG I + +G    G          +    +++ ++  
Sbjct: 1516 VYETAEHLEAALPHINGGDAVSLDGVIARENGFIYSG------CCTPEVHFPITVTERQE 1575

Query: 354  ESERQMKEMKWKEEKMLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEA 398
            ++  Q++  + K+ K  E M  E   L  L    +K   ++  F A A
Sbjct: 1576 KALVQLEITRDKKRKTEEMMTEENRSLRRLVKKLKKANEKYQNFTAMA 1596

[Close]

BLAST of CsaV3_1G033480 vs. TrEMBL
Match: tr|A0A0A0LXU9|A0A0A0LXU9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G478600 PE=4 SV=1)

HSP 1 Score: 788.5 bits (2035), Expect = 7.3e-225
Identity = 401/406 (98.77%), Postives = 403/406 (99.26%), Query Frame = 0


Query: 5   MMKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTLK 64
           MMKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTLK
Sbjct: 1   MMKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTLK 60

Query: 65  DKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQENTAASILCHSK 124
           DKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSED+ SYQK ILQQENTAASILCHSK
Sbjct: 61  DKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDEPSYQKGILQQENTAASILCHSK 120

Query: 125 TNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLEK 184
           TNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLEK
Sbjct: 121 TNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLEK 180

Query: 185 YDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLP 244
           YDTEGCINETSGLHGFGTSLGKTLEGRFNVI+LETLRSYSGEFVANDPQRRLHIPKPRLP
Sbjct: 181 YDTEGCINETSGLHGFGTSLGKTLEGRFNVIALETLRSYSGEFVANDPQRRLHIPKPRLP 240

Query: 245 NGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPF 304
           NGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP 
Sbjct: 241 NGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPC 300

Query: 305 ITDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEEK 364
           ITDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEEK
Sbjct: 301 ITDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEEK 360

Query: 365 MLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQTPVGETSR 411
           MLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQTPVGETSR
Sbjct: 361 MLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQTPVGETSR 406

[Close]

BLAST of CsaV3_1G033480 vs. TrEMBL
Match: tr|A0A0A0L6R1|A0A0A0L6R1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239290 PE=4 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 1.6e-208
Identity = 374/405 (92.35%), Postives = 388/405 (95.80%), Query Frame = 0


Query: 1   MYSFMMKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFL 60
           +YSF MKLDEFDN KVPKDEMQDVALSHED I+LHSKKLQDDLQTMGMKIQ+HEDNIRFL
Sbjct: 57  LYSFTMKLDEFDNYKVPKDEMQDVALSHEDPISLHSKKLQDDLQTMGMKIQLHEDNIRFL 116

Query: 61  KTLKDKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQENTAASIL 120
           KTLKDKLVDSIIDLQV L K+HASNTPKIENKDGSDTQSED+ SYQK ILQQENTAASIL
Sbjct: 117 KTLKDKLVDSIIDLQVTLGKYHASNTPKIENKDGSDTQSEDEPSYQKGILQQENTAASIL 176

Query: 121 CHSKTNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVK 180
           CHSKTNPKMLASDPTLSDDVLGVVAELGHV+D NLSSLLSEYLGT+TMLAIVCKTYNGVK
Sbjct: 177 CHSKTNPKMLASDPTLSDDVLGVVAELGHVKDNNLSSLLSEYLGTKTMLAIVCKTYNGVK 236

Query: 181 SLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPK 240
           SLEKYDTEGCIN+TSGLHGFGTSLGKTLEGRFNVI+LETLRSYSGEFVA+DPQRRL IPK
Sbjct: 237 SLEKYDTEGCINKTSGLHGFGTSLGKTLEGRFNVIALETLRSYSGEFVADDPQRRLDIPK 296

Query: 241 PRLPNGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQ 300
           PRLPNGDCP GFLGYAVNMIDIDRTHL FLTASGYGLRETLFYSLFFCLQIYKTRTEMLQ
Sbjct: 297 PRLPNGDCPDGFLGYAVNMIDIDRTHLSFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQ 356

Query: 301 AVPFITDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKW 360
           AVP ITDGALSLDGGIIKRSGLFCLGNRGD KVTFSKTSI+ SLPD YMESERQMKEMKW
Sbjct: 357 AVPCITDGALSLDGGIIKRSGLFCLGNRGDAKVTFSKTSINSSLPDHYMESERQMKEMKW 416

Query: 361 KEEKMLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQTPV 406
           K+EK+LEDMRREQ LLD+LKLNFEKKKAE VQFLAEAAARPQTPV
Sbjct: 417 KKEKLLEDMRREQALLDSLKLNFEKKKAEIVQFLAEAAARPQTPV 461

[Close]

BLAST of CsaV3_1G033480 vs. TrEMBL
Match: tr|A0A1S3CS36|A0A1S3CS36_CUCME (protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Cucumis melo OX=3656 GN=LOC103504141 PE=4 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 2.3e-202
Identity = 364/400 (91.00%), Postives = 380/400 (95.00%), Query Frame = 0


Query: 6   MKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTLKD 65
           MKL+EFDN KVPKDEMQDV LSHED INLHSKKLQDDLQTMGMKIQ+HEDNIRFL+TLKD
Sbjct: 1   MKLEEFDNFKVPKDEMQDVELSHEDPINLHSKKLQDDLQTMGMKIQLHEDNIRFLRTLKD 60

Query: 66  KLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQENTAASILCHSKT 125
           KLVDSIIDLQVIL K+HASN+PKIENKDGSDTQSEDK SYQK ILQQEN+AASILCH KT
Sbjct: 61  KLVDSIIDLQVILGKYHASNSPKIENKDGSDTQSEDKPSYQKAILQQENSAASILCHLKT 120

Query: 126 NPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLEKY 185
           NPKMLASDPT+S+DVLGVVAELGHVED  LSSLLSEYLGTETM AIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTMSEDVLGVVAELGHVEDDTLSSLLSEYLGTETMSAIVCKTYNGVKSLEKY 180

Query: 186 DTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPN 245
           DT+G IN+TSGLHGFGTSLGKTLEGRFNVISLETLR YSGEFVA+DPQRRL IPKPRLPN
Sbjct: 181 DTDGGINKTSGLHGFGTSLGKTLEGRFNVISLETLRPYSGEFVADDPQRRLDIPKPRLPN 240

Query: 246 GDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFI 305
           GDCPAGFLGYAVNMI+IDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP I
Sbjct: 241 GDCPAGFLGYAVNMINIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPCI 300

Query: 306 TDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEEKM 365
           TDGALSLDGGIIKRSGLFCLGNRGD K TFSKTS + SLPD YMESERQMKEMKWK+EKM
Sbjct: 301 TDGALSLDGGIIKRSGLFCLGNRGDMKATFSKTSTNSSLPDHYMESERQMKEMKWKKEKM 360

Query: 366 LEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAARPQTPV 406
           LEDMRRE+ LLD+LKLNFEKKKAEFVQFLAEAAARPQTPV
Sbjct: 361 LEDMRRERALLDSLKLNFEKKKAEFVQFLAEAAARPQTPV 400

[Close]

BLAST of CsaV3_1G033480 vs. TrEMBL
Match: tr|E5GBA2|E5GBA2_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 4.0e-199
Identity = 359/395 (90.89%), Postives = 375/395 (94.94%), Query Frame = 0


Query: 6   MKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTLKD 65
           MKL+EFDN KVPKDEMQDV LSHED INLHSKKLQDDLQTMGMKIQ+HEDNIRFL+TLKD
Sbjct: 1   MKLEEFDNFKVPKDEMQDVELSHEDPINLHSKKLQDDLQTMGMKIQLHEDNIRFLRTLKD 60

Query: 66  KLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQENTAASILCHSKT 125
           KLVDSIIDLQVIL K+HASN+PKIENKDGSDTQSEDK SYQK ILQQEN+AASILCH KT
Sbjct: 61  KLVDSIIDLQVILGKYHASNSPKIENKDGSDTQSEDKPSYQKAILQQENSAASILCHLKT 120

Query: 126 NPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLEKY 185
           NPKMLASDPT+S+DVLGVVAELGHVED  LSSLLSEYLGTETM AIVCKTYNGVKSLEKY
Sbjct: 121 NPKMLASDPTMSEDVLGVVAELGHVEDDTLSSLLSEYLGTETMSAIVCKTYNGVKSLEKY 180

Query: 186 DTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPN 245
           DT+G IN+TSGLHGFGTSLGKTLEGRFNVISLETLR YSGEFVA+DPQRRL IPKPRLPN
Sbjct: 181 DTDGGINKTSGLHGFGTSLGKTLEGRFNVISLETLRPYSGEFVADDPQRRLDIPKPRLPN 240

Query: 246 GDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFI 305
           GDCPAGFLGYAVNMI+IDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP I
Sbjct: 241 GDCPAGFLGYAVNMINIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPCI 300

Query: 306 TDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEEKM 365
           TDGALSLDGGIIKRSGLFCLGNRGD K TFSKTS + SLPD YMESERQMKEMKWK+EKM
Sbjct: 301 TDGALSLDGGIIKRSGLFCLGNRGDMKATFSKTSTNSSLPDHYMESERQMKEMKWKKEKM 360

Query: 366 LEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAAR 401
           LEDMRRE+ LLD+LKLNFEKKKAEFVQFLAEAAAR
Sbjct: 361 LEDMRRERALLDSLKLNFEKKKAEFVQFLAEAAAR 395

[Close]

BLAST of CsaV3_1G033480 vs. TrEMBL
Match: tr|A0A251QP32|A0A251QP32_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G309700 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.1e-127
Identity = 238/395 (60.25%), Postives = 307/395 (77.72%), Query Frame = 0


Query: 5   MMKLDEFDNDKVPKDEMQDVALSHEDQINLHSKKLQDDLQTMGMKIQVHEDNIRFLKTLK 64
           +M++DE +   V KD MQ+   +  + I  ++KKLQDDLQ MGMKI+ HEDNI+ LK+ +
Sbjct: 23  LMQVDEKETSLVMKDGMQNGGFAQAESIIYYTKKLQDDLQMMGMKIKQHEDNIKLLKSQR 82

Query: 65  DKLVDSIIDLQVILDKHHASNTPKIENKDGSDTQSEDKASYQKEILQQENTAASILCHSK 124
           +KL DSI+DLQVIL K+H S   KIEN+D S  +SE++ +  K+ILQ+E +AA IL   K
Sbjct: 83  NKLDDSILDLQVILGKYHTSTASKIENEDHSHCKSEEETT--KKILQREKSAAGILWQLK 142

Query: 125 TNPKMLASDPTLSDDVLGVVAELGHVEDKNLSSLLSEYLGTETMLAIVCKTYNGVKSLEK 184
           T     A+  TL+ DVLG+VA LG VED NLS LLSEYLG +TML+IVCKTY GVK+LE 
Sbjct: 143 TRHGTQAAHLTLTKDVLGIVAMLGKVEDDNLSRLLSEYLGIDTMLSIVCKTYEGVKALET 202

Query: 185 YDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLP 244
           YD EGCI ++SGLHG G S+G+TLEGRF VI L+ LR Y+GEFV +DPQRRL + KPRLP
Sbjct: 203 YDNEGCIKKSSGLHGLGASIGRTLEGRFQVICLDNLRPYAGEFVPDDPQRRLDLLKPRLP 262

Query: 245 NGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPF 304
           NG+CP GFLGYAVNMI +D T LF +TASG+GLRETLFY+LFF LQIYKTR +M+ A+P 
Sbjct: 263 NGECPPGFLGYAVNMIHVDSTSLFCVTASGHGLRETLFYNLFFRLQIYKTRADMVPALPC 322

Query: 305 ITDGALSLDGGIIKRSGLFCLGNRGDTKVTFSKTSIDLSLPDQYMESERQMKEMKWKEEK 364
           I+DGA+SLDGG+I+ +G+F LGNR D  V F K S+  SLP+ Y++SERQ+ E+KWK+EK
Sbjct: 323 ISDGAISLDGGMIRSTGVFSLGNREDVDVRFPKLSVTSSLPETYLDSERQINELKWKKEK 382

Query: 365 MLEDMRREQVLLDTLKLNFEKKKAEFVQFLAEAAA 400
           M EDM+REQ LLD  K NF++KK +F++FLA++++
Sbjct: 383 MQEDMKREQALLDNAKFNFDRKKQDFLKFLADSSS 415

The following BLAST results are available for this feature:

BLAST of CsaV3_1G033480 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65652.1	1.1e-224	98.77	hypothetical protein Csa_1G478600 [Cucumis sativus]	[more]
KGN57665.1	2.5e-208	92.35	hypothetical protein Csa_3G239290 [Cucumis sativus]	[more]
XP_004146267.2	3.0e-206	92.75	PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 [Cucumis sativus]	[more]
XP_008466829.1	3.4e-202	91.00	PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 [Cucumis melo]	[more]
ADN33744.1	6.1e-199	90.89	hypothetical protein [Cucumis melo subsp. melo]	[more]

BLAST of CsaV3_1G033480 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G49250.1	2.7e-100	49.37	defective in meristem silencing 3	[more]
AT5G24280.1	1.2e-34	33.33	gamma-irradiation and mitomycin c induced 1	[more]

BLAST of CsaV3_1G033480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94A79\|DMS3_ARATH	4.9e-99	49.37	Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Arabidopsis thaliana OX=3702 GN=DMS...	[more]
sp\|F4KFS5\|GMI1_ARATH	2.1e-33	33.33	Structural maintenance of chromosomes flexible hinge domain-containing protein G...	[more]

BLAST of CsaV3_1G033480 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LXU9\|A0A0A0LXU9_CUCSA	7.3e-225	98.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G478600 PE=4 SV=1	[more]
tr\|A0A0A0L6R1\|A0A0A0L6R1_CUCSA	1.6e-208	92.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239290 PE=4 SV=1	[more]
tr\|A0A1S3CS36\|A0A1S3CS36_CUCME	2.3e-202	91.00	protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Cucumis melo OX=3656 GN=LOC10350414...	[more]
tr\|E5GBA2\|E5GBA2_CUCME	4.0e-199	90.89	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A251QP32\|A0A251QP32_PRUPE	3.1e-127	60.25	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G309700 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006306	DNA methylation
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0044710	single-organism metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G033480.1	CsaV3_1G033480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..104
None	No IPR available	PANTHER	PTHR33566:SF1	PROTEIN DEFECTIVE IN MERISTEM SILENCING 3	coord: 17..398
None	No IPR available	PANTHER	PTHR33566	FAMILY NOT NAMED	coord: 17..398

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G033480	CSPI01G22330	Wild cucumber (PI 183967)	cpicucB000
CsaV3_1G033480	Cucsa.213320	Cucumber (Gy14) v1	cgycucB333
CsaV3_1G033480	CsGy1G021910	Cucumber (Gy14) v2	cgybcucB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None