CsaV3_1G032170 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTATTGGAAATACTTTATTTCCTTCTTGTTTGAGGTTTTGTATTTGGAGTTTAGGGAAAATTATGAAGAAGAAGAAAGAAGTTATTGGGTTTTTGTTGGAAAATAGTGAAGAAATTGGGTATTTGCATTTGCTTCCAAAGCTATATTCATTGGTTTTGGTTGGAAGTGTTCTTGGGTTTGTTTTAATACAATTTGTAGCAATTGGAGCAATGGAGTGGAGATCATCAAATAATGGATTTAGTGGATTAAATTGGGTTGAGAAATTGATTGGGATTTTGTTTTTAAGTGTAAATTCAAGACATAGTGGTGAATCAACTGTTGATCTATCAACACTCTCTTCTGCCATATTGGTTCTCTTTGTTGCTATGATGTTAGTAATTTCTTCTCTCTCTTTTGATTAATTTTTGCATTTGTTACATTATATATATTCAATTTAGTACAGAAATTGTTGAACTTGATTAAGTAATATATATATTTTTATATATATATATTTGAAAACAACTAATTAAAGAACTTAATTTGGGTTTGGTTAATTTACTTAGTGATAACTAGTTGGTTTTAAGTTTTCATTTTATTTAACCCTTTAAGGTAAGCTTATAAATGGTATAATTGGGGTGGCATCAATTCTTACCATGAACTAATTTCAACAATTATTTTAGAATAAATATACAATAATTAAAATGATCAATAATACACTCGATTTCTTGTGCTAGTTAGGAAAAAAAAAGTAATTGGGTTGACTATTAAGGTTTTATAATAATGAAATGATTAATAAGGTGGACTCACACCTTAGTATACATATAAATATAATTAATAGTTATGAAACTTTTCTTCTTTTAAGGATGACTTCTTTAATTTATTTATTTATAGAAAAATGACCTTCTTAACTATGATTGATGTCTACAAATCCTCGTAGAAAAAAAAGTCTTAATTTAATTTTAATTATTGGTAAAAGTTTGACTTATCACTATCAATTAATATGCAATTATTATTACTGTTATTAAAAGTAGCAACTTTTTATTAATAATAATAATAAAAAAAAGTTTGTTCTTTAAATCTTTGTATTATTTATATTTTAATTTTCAGGTATCTTCCACCTTACACTTCTTTCATGCCAATAAAATCAATTGAAGAAGAAGAAAATGAAATGGAAGGCAATAGAAAAAGAAGATCAAGAACAAAAAGGGCAAAATTTATGGATAATTTTGTGTTTTCACAACTCTCTTATCTCATCATCTTCACCTTCATTATATGCATCACTGAGAGACATAATATGAAACAAGATCCTCTCAATTTCAATATTTTCAACATTGTTTTTGAAGTCATCAGGTAATTAATTTTCATTTTAACCTTTTATACAACGATTAATTTGTTTCATATCTTACTAAATTAACATAATTATGCATTAAATTTGGACACAGTGCATATGGAAACGTGGGGTTTTCGATGGGATATAGCTGTGGAAGACGAGTTCATCCTCAAAGCAATTGTGTCGACAAGTCGTTTGGGTTTTCTGGAAAATGGAGCGACAATGGAAAGCTGGTTCTTATTGTCGTCATGATCTTTGGACGATTAAAGAAGTTTAATATGAATAGATCACAAAGAGCTTGGAAGCTTCTCTAATACAAAATACATCACCTGTGTAAAAATGAAAACACAACTTTATTTATAATCATTAATACAAATTTCTTTGCCTTAATCTATT ATGAAGAAGAAGAAAGAAGTTATTGGGTTTTTGTTGGAAAATAGTGAAGAAATTGGGTATTTGCATTTGCTTCCAAAGCTATATTCATTGGTTTTGGTTGGAAGTGTTCTTGGGTTTGTTTTAATACAATTTGTAGCAATTGGAGCAATGGAGTGGAGATCATCAAATAATGGATTTAGTGGATTAAATTGGGTTGAGAAATTGATTGGGATTTTGTTTTTAAGTGTAAATTCAAGACATAGTGGTGAATCAACTGTTGATCTATCAACACTCTCTTCTGCCATATTGGTTCTCTTTGTTGCTATGATGTATCTTCCACCTTACACTTCTTTCATGCCAATAAAATCAATTGAAGAAGAAGAAAATGAAATGGAAGGCAATAGAAAAAGAAGATCAAGAACAAAAAGGGCAAAATTTATGGATAATTTTGTGTTTTCACAACTCTCTTATCTCATCATCTTCACCTTCATTATATGCATCACTGAGAGACATAATATGAAACAAGATCCTCTCAATTTCAATATTTTCAACATTGTTTTTGAAGTCATCAGTGCATATGGAAACGTGGGGTTTTCGATGGGATATAGCTGTGGAAGACGAGTTCATCCTCAAAGCAATTGTGTCGACAAGTCGTTTGGGTTTTCTGGAAAATGGAGCGACAATGGAAAGCTGGTTCTTATTGTCGTCATGATCTTTGGACGATTAAAGAAGTTTAATATGAATAGATCACAAAGAGCTTGGAAGCTTCTCTAA ATGAAGAAGAAGAAAGAAGTTATTGGGTTTTTGTTGGAAAATAGTGAAGAAATTGGGTATTTGCATTTGCTTCCAAAGCTATATTCATTGGTTTTGGTTGGAAGTGTTCTTGGGTTTGTTTTAATACAATTTGTAGCAATTGGAGCAATGGAGTGGAGATCATCAAATAATGGATTTAGTGGATTAAATTGGGTTGAGAAATTGATTGGGATTTTGTTTTTAAGTGTAAATTCAAGACATAGTGGTGAATCAACTGTTGATCTATCAACACTCTCTTCTGCCATATTGGTTCTCTTTGTTGCTATGATGTATCTTCCACCTTACACTTCTTTCATGCCAATAAAATCAATTGAAGAAGAAGAAAATGAAATGGAAGGCAATAGAAAAAGAAGATCAAGAACAAAAAGGGCAAAATTTATGGATAATTTTGTGTTTTCACAACTCTCTTATCTCATCATCTTCACCTTCATTATATGCATCACTGAGAGACATAATATGAAACAAGATCCTCTCAATTTCAATATTTTCAACATTGTTTTTGAAGTCATCAGTGCATATGGAAACGTGGGGTTTTCGATGGGATATAGCTGTGGAAGACGAGTTCATCCTCAAAGCAATTGTGTCGACAAGTCGTTTGGGTTTTCTGGAAAATGGAGCGACAATGGAAAGCTGGTTCTTATTGTCGTCATGATCTTTGGACGATTAAAGAAGTTTAATATGAATAGATCACAAAGAGCTTGGAAGCTTCTCTAA MKKKKEVIGFLLENSEEIGYLHLLPKLYSLVLVGSVLGFVLIQFVAIGAMEWRSSNNGFSGLNWVEKLIGILFLSVNSRHSGESTVDLSTLSSAILVLFVAMMYLPPYTSFMPIKSIEEEENEMEGNRKRRSRTKRAKFMDNFVFSQLSYLIIFTFIICITERHNMKQDPLNFNIFNIVFEVISAYGNVGFSMGYSCGRRVHPQSNCVDKSFGFSGKWSDNGKLVLIVVMIFGRLKKFNMNRSQRAWKLL
BLAST of CsaV3_1G032170 vs. NCBI nr
Match: XP_004150749.2 (PREDICTED: sodium transporter HKT1-like [Cucumis sativus]) HSP 1 Score: 495.0 bits (1273), Expect = 1.5e-136 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. NCBI nr
Match: XP_008453695.1 (PREDICTED: cation transporter HKT8-like [Cucumis melo]) HSP 1 Score: 437.2 bits (1123), Expect = 3.8e-119 Identity = 231/258 (89.53%), Postives = 237/258 (91.86%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. NCBI nr
Match: XP_022134789.1 (sodium transporter HKT1-like [Momordica charantia]) HSP 1 Score: 362.8 bits (930), Expect = 9.1e-97 Identity = 187/248 (75.40%), Postives = 213/248 (85.89%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. NCBI nr
Match: XP_023516746.1 (cation transporter HKT8-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 360.1 bits (923), Expect = 5.9e-96 Identity = 188/248 (75.81%), Postives = 211/248 (85.08%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. NCBI nr
Match: XP_022921389.1 (probable cation transporter HKT6 [Cucurbita moschata]) HSP 1 Score: 350.9 bits (899), Expect = 3.6e-93 Identity = 184/248 (74.19%), Postives = 209/248 (84.27%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. TAIR10
Match: AT4G10310.1 (high-affinity K+ transporter 1) HSP 1 Score: 229.6 bits (584), Expect = 2.2e-60 Identity = 126/247 (51.01%), Postives = 166/247 (67.21%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. Swiss-Prot
Match: sp|Q6H501|HKT6_ORYSJ (Probable cation transporter HKT6 OS=Oryza sativa subsp. japonica OX=39947 GN=HKT6 PE=2 SV=2) HSP 1 Score: 238.8 bits (608), Expect = 6.5e-62 Identity = 122/240 (50.83%), Postives = 167/240 (69.58%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. Swiss-Prot
Match: sp|Q84TI7|HKT1_ARATH (Sodium transporter HKT1 OS=Arabidopsis thaliana OX=3702 GN=HKT1 PE=1 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 3.9e-59 Identity = 126/247 (51.01%), Postives = 166/247 (67.21%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. Swiss-Prot
Match: sp|Q7XPF7|HKT7_ORYSJ (Probable cation transporter HKT7 OS=Oryza sativa subsp. japonica OX=39947 GN=HKT7 PE=2 SV=2) HSP 1 Score: 228.8 bits (582), Expect = 6.7e-59 Identity = 120/231 (51.95%), Postives = 157/231 (67.97%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. Swiss-Prot
Match: sp|A2WNZ9|HKT8_ORYSI (Cation transporter HKT8 OS=Oryza sativa subsp. indica OX=39946 GN=HKT8 PE=2 SV=2) HSP 1 Score: 211.8 bits (538), Expect = 8.5e-54 Identity = 111/227 (48.90%), Postives = 151/227 (66.52%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. Swiss-Prot
Match: sp|Q0JNB6|HKT8_ORYSJ (Cation transporter HKT8 OS=Oryza sativa subsp. japonica OX=39947 GN=HKT8 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 8.5e-54 Identity = 111/227 (48.90%), Postives = 151/227 (66.52%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. TrEMBL
Match: tr|A0A1S3BWY9|A0A1S3BWY9_CUCME (cation transporter HKT8-like OS=Cucumis melo OX=3656 GN=LOC103494343 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 2.5e-119 Identity = 231/258 (89.53%), Postives = 237/258 (91.86%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. TrEMBL
Match: tr|A0A1S4DZH6|A0A1S4DZH6_CUCME (probable cation transporter HKT7 OS=Cucumis melo OX=3656 GN=LOC103494344 PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 3.0e-80 Identity = 151/242 (62.40%), Postives = 194/242 (80.17%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. TrEMBL
Match: tr|A0A0A0LUE4|A0A0A0LUE4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G433630 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 2.5e-79 Identity = 152/167 (91.02%), Postives = 157/167 (94.01%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. TrEMBL
Match: tr|M5XNP4|M5XNP4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G066800 PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.3e-78 Identity = 150/249 (60.24%), Postives = 197/249 (79.12%), Query Frame = 0
BLAST of CsaV3_1G032170 vs. TrEMBL
Match: tr|F6I5Q5|F6I5Q5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0103g00150 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 6.9e-77 Identity = 155/249 (62.25%), Postives = 182/249 (73.09%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|