CsaV3_1G031430 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CACGATCTTGTTTTTCATTCCTAACTAGACTTTTATTGGTACTCAATTTATCGCCATACTTTCATGTTTATTTAGTTTGAAAAATATATAGTTTAGTAAAATACACAAGAAGGAGCTAAACACACAAGAAGGAGGGTCGTAATTGTGTTATTTATTATGCACTTCTTCTAATAGTTGTCTATAATTAATACCCAAATTTTTAGATACTAACTTTTCTGTTGGGAACATATGCTCTTCTATATCTCCTTTCAATATACATATCCTTTGGGTTTAAACCTAATACATGTAAGCTTTAGGGCTTCCCTTGAGCAACCCTTAAGAGATATCATCAACCTAATTGTCTAATTAGTAAGAGTGGCAGTCTATCTTAATATGATATTACATGAAAATAAAAGTAGAAGTAATATCTGAAAATGAGTGGGAAAATAGTATATTAATGTTGTGAGGTGAGGGGTGATATTTAGAAAAATGTGTGGGGGTGTGTAATTTAGTGAAGAGGTTAGGGTGTCATATACATATGAGAATCCAAAATTTCAAAAATTCATGCAGACCCACACTCATTGCCATCTGTGTCCAGCTCTTACTTCCTACTTCTCCTACCCCACAATTTAGCTCTATACACGCAACCCTCCTTCTTCCTCCCCTTCCCTTATCTCCTTTTTCCTTACTATAAATAATTCCACTTTCCCTCTCCCCTAACTCCAAAAACACACACACACACACACACTCTCTCTCTAATATTATTCAAATTCCCCCCACGCTCACACCCCCACTTCACTTCTTCCCAAAATTACTCAAACATATCCCATGGCTACTCCTTCTCCTTTCTCATCTCTCTTACTCTTCCTATCTCTTCTCTCTGTTTCCTCTGTTTTTTGTGGTAACTTTTACAATGACTTTGAAATCACTTGGGGTAATGACCGTGCCAAAATTCTCAATAATGGTGACCTTCTTACTCTTTCTTTAGACCGAGGCTCTGGCTCTGGCTTTCAGTCTAAGAATGTTTACCTTTATGGTAAAATTGATATGCAACTTAAACTTGTCCCTGGAAACTCTGCTGGCACTGTCACTACTTATTATGTATGTTACTTTAATTACCATATAATGATGTTACGTATTTATCTATATGTTTTTTTTTTTGTTGATTACTTTCCTCATTTTGCTTTCTTTTTTTCTTCTTCTTCTTAGCTTAAATCCCAAGGCTCGACGTGGGATGAAATAGACTTTGAATTCTTGGGAAATCTCAGCGGTGATCCTTATACTCTTCATACTAATGTTTACACCCAAGGCAAAGGCGACAGAGAACAACAGTTTCACCTTTGGTTTGATCCTACCTATGATTTCCACACCTATTCAATCCTCTGGAATCCCCAAGGAATCATGTAAGAATCAAACCAATCAATCAATTGATTGTCTTTTAACATGGTATCACACGTTGAAAACATAACTAAAATTTATGTTTATTTACGTGGGAATGACTTGAATCTTATATCTAACAGCTTGAACACCAAAAAAAATAATAATAATAAACAAAGTATTGTTAAATTTTGACACTTTGAAAAAAAAAAAACAGAGTATTGCTAAATTTAGTTATGTTATTTATGATTTTCACTAGTTTAAAAAATCTAATCTGTCACAATAATTATAGAATTCTAGAGACTGGATGTTTTGAATTATTCGCTTTAATCATAAACTGTTTTTAACGCCGGTAAATTAATCTGTGTATCAATTTTTCAGTGGTCTGTTTGGTGTGCTAGGATAACCATATTTGTTTTGGTTGGTTCGACAGATTCTCGGTAGATGGAACACCGATCAGAGAGTTCAAGAACCACGAATCCTCGGGGGTTCTGTTTCCAAAAAACCAACCGATGAGACTGTACTCGAGTCTATGGAACGCAGACGACTGGGCGACAAGAGGAGGGCTAGTGAAGACAGATTGGTCAAAAGCTCCATTCACAGCGGCGTACAGAAACTTCAACGCGAACGTTTGTGTGTGGTCGGGGGGAGCGTCGTCGTGTTCGTCAGGAACGAATGTGGGGGGGAGAGGATGGCTGTCGGAAAATCTTGACATTACTCGACAACAAAGGATGAAGTGGGTTCAGAGGAATTACATGATATACAATTATTGTACCGACGCCAAGAGATTCCCTCAAGGCTACCCTCCGGAGTGTTCACTTGCCTCTTAGATTTGGTCATGCCCCCACATTGCACATTTGCCTTCCTTTCCTTTCCTTTCCTTGCCTTGCCTTGCCGTACAAAATTTGGATGGATACATCATATTTTAATTAATTAAATTAAATTAAATTACTAATAAAATTAATCACATATATATATTTAGTCCTATTGTTGTATTATTGTATATAACAATATGTATATCTGGTTTTGCATGGCTATATTGTGTACGTGGTTCTGTTTTCCTGTTTCCCTTTTCTTTCTTTTTTTCACTCCTATATTTGGGAAAGATTAATAATATATAATCTGTCAGATGCTCTTTTCATCCAAAGGCAAATGTTAATTTTGCTTCTATCTACTTGTCGGTTGATTGAGTTTTGAATATTATTTTAATTTGTTTACTTCTTTTTTCTAAAGTACAATTTGGAGACTTGAACCCCAGATGTGATGTGCTTAAATTTGTTTACTATCGTTTAATTATTTATACAATAATCTTCGTATTAATTTTCCACTGAATTGAATATTTGAGCAGGCTGCTCTGCTCCACGACGTTATAGGGATGCTACTGATAATTTCTTATATTTTGTTTTATATAATATTATAATGTATACTGTATAGGAAGGAATAAAAGTGAAATTCTCCAGACATCCAGGAGGGAAATATGTCAGAGATGATACGAGATGTGTTGGGAATTTAAGGGTACTGAAAAGTTCACGCTGTCAATCCAATTTTCTCTTTGTTACCAACATCTCTTACTAATTACTCACCAATTTTCTTTTTCTTCTTTTTCTTCTTTTTCTTCTTTTTCTTGTTAATTTATAATGTCACGTTGAATTTTAGTTTCATCTTTTAAAAATTTCTATTTAGACTAGAGGATGAGGATGCTCTTCTTTATTCTTATCTTATTGCTCTAGAAGGGACAACAGATGTTAGATAAAATCTAGTTTTATGTATGTTTTCAGAAGCTTAAAGTTAAAAGATGAGGTTGGATTAGTTTGATTGAACATAGGTAACTCTCGGTTAATGTACTAAAAATCATCTATATTGCATACTTGTCAGGTGGATGTTTGATGATATTGAATTTTATAAACAGTATCATTCATCTACTTCGAGAGGCAATAATATCCATACAAACTTAGTCCAATTTAACACTTATGTAAGGACACGAATATGAGTTATATATGTTGTTGTCAATTCAATTCAAATGAAGTCCATGAAGAGAGGAAACAGCACCTGAAGACAAGTCTAGACAAGGATTTATACACCAAACCGAGTTTAATTAAATAATAATATCAAAAGTTATAATTAACAATTTGTTTGGATGAAAGTATATGGAATATTAAATTGGGGATATGGACATGAAACTAAATCGACAAAAGTCTGAAAAGTATGAGATTGTCCTGAAAGCATTTTAAAATGTTACTTCTAGATTTTTTTTAAAAAAAAAAAGAAAAAAAAAACTTAATAATTATAAGGTGTACGTTGGGGAATTAATTTTGTCAGGGAGAGATGGAGTCACGTGACTGGGGCATGGTTTTTCATTTCTCCCTATACTGTTTTACTACATTTATTTTGGGGTATCTCATCATAATAAATTTATTACAGTGGAGGAATTTGCTCTTTTCAACAGGTTTTTTTAAATTGTTTTCAATTAATTTTCCTGATAAAAAGAAAAAAAAACAGCAATAATTATCTAATATAAAGTTGAGATGCTGATAAGAATATATACAGACTATAAAATACATAGCCATTAGATCTACCATTTGTAAGAAGATAGTCTTGAAAGGTACGAGTATAGAAATATTTCATAAGGAAAACTTTAAAATTTGTTCTTTCAAGAATTCCAACTCTTTAACCATGAAAGGAAACAAATTGATATGGTATTGATGTTTTTGGCAGCGGGTTGGACCAAACAATAGTGGAGTTTGAAAAAAAGAACCTACAAAAATTCTCTTTTTCCTTATCTCCTCTGAACTCCACCCCTCTAATCTCTCTCGACAATCACTACTAACCCATTAAAGAATCATAATAAAGGCTCGTCATCATCCTACACATGTTAATTGAAATTTCAAGAAAATTAGAGGTAGAGATGATACAAAGGAGGACGAGTTCATAAATCTAATTTTTTGAGGCTAAGCACACCTAAAGACCTAAGGAGTGTAAATATATCTTACGAAATCAAATATAACAACATATCAATTAATATCATTATTATATAAATAGTGTGACAAGAAAGCCCAAAATAGTTATTCTTACTTATATATCCAAG ATGGCTACTCCTTCTCCTTTCTCATCTCTCTTACTCTTCCTATCTCTTCTCTCTGTTTCCTCTGTTTTTTGTGGTAACTTTTACAATGACTTTGAAATCACTTGGGGTAATGACCGTGCCAAAATTCTCAATAATGGTGACCTTCTTACTCTTTCTTTAGACCGAGGCTCTGGCTCTGGCTTTCAGTCTAAGAATGTTTACCTTTATGGTAAAATTGATATGCAACTTAAACTTGTCCCTGGAAACTCTGCTGGCACTGTCACTACTTATTATCTTAAATCCCAAGGCTCGACGTGGGATGAAATAGACTTTGAATTCTTGGGAAATCTCAGCGGTGATCCTTATACTCTTCATACTAATGTTTACACCCAAGGCAAAGGCGACAGAGAACAACAGTTTCACCTTTGGTTTGATCCTACCTATGATTTCCACACCTATTCAATCCTCTGGAATCCCCAAGGAATCATATTCTCGGTAGATGGAACACCGATCAGAGAGTTCAAGAACCACGAATCCTCGGGGGTTCTGTTTCCAAAAAACCAACCGATGAGACTGTACTCGAGTCTATGGAACGCAGACGACTGGGCGACAAGAGGAGGGCTAGTGAAGACAGATTGGTCAAAAGCTCCATTCACAGCGGCGTACAGAAACTTCAACGCGAACGTTTGTGTGTGGTCGGGGGGAGCGTCGTCGTGTTCGTCAGGAACGAATGTGGGGGGGAGAGGATGGCTGTCGGAAAATCTTGACATTACTCGACAACAAAGGATGAAGTGGGTTCAGAGGAATTACATGATATACAATTATTGTACCGACGCCAAGAGATTCCCTCAAGGCTACCCTCCGGAGTGTTCACTTGCCTCTTAG ATGGCTACTCCTTCTCCTTTCTCATCTCTCTTACTCTTCCTATCTCTTCTCTCTGTTTCCTCTGTTTTTTGTGGTAACTTTTACAATGACTTTGAAATCACTTGGGGTAATGACCGTGCCAAAATTCTCAATAATGGTGACCTTCTTACTCTTTCTTTAGACCGAGGCTCTGGCTCTGGCTTTCAGTCTAAGAATGTTTACCTTTATGGTAAAATTGATATGCAACTTAAACTTGTCCCTGGAAACTCTGCTGGCACTGTCACTACTTATTATCTTAAATCCCAAGGCTCGACGTGGGATGAAATAGACTTTGAATTCTTGGGAAATCTCAGCGGTGATCCTTATACTCTTCATACTAATGTTTACACCCAAGGCAAAGGCGACAGAGAACAACAGTTTCACCTTTGGTTTGATCCTACCTATGATTTCCACACCTATTCAATCCTCTGGAATCCCCAAGGAATCATATTCTCGGTAGATGGAACACCGATCAGAGAGTTCAAGAACCACGAATCCTCGGGGGTTCTGTTTCCAAAAAACCAACCGATGAGACTGTACTCGAGTCTATGGAACGCAGACGACTGGGCGACAAGAGGAGGGCTAGTGAAGACAGATTGGTCAAAAGCTCCATTCACAGCGGCGTACAGAAACTTCAACGCGAACGTTTGTGTGTGGTCGGGGGGAGCGTCGTCGTGTTCGTCAGGAACGAATGTGGGGGGGAGAGGATGGCTGTCGGAAAATCTTGACATTACTCGACAACAAAGGATGAAGTGGGTTCAGAGGAATTACATGATATACAATTATTGTACCGACGCCAAGAGATTCCCTCAAGGCTACCCTCCGGAGTGTTCACTTGCCTCTTAG MATPSPFSSLLLFLSLLSVSSVFCGNFYNDFEITWGNDRAKILNNGDLLTLSLDRGSGSGFQSKNVYLYGKIDMQLKLVPGNSAGTVTTYYLKSQGSTWDEIDFEFLGNLSGDPYTLHTNVYTQGKGDREQQFHLWFDPTYDFHTYSILWNPQGIIFSVDGTPIREFKNHESSGVLFPKNQPMRLYSSLWNADDWATRGGLVKTDWSKAPFTAAYRNFNANVCVWSGGASSCSSGTNVGGRGWLSENLDITRQQRMKWVQRNYMIYNYCTDAKRFPQGYPPECSLAS
BLAST of CsaV3_1G031430 vs. NCBI nr
Match: XP_004146309.1 (PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 22 [Cucumis sativus] >KGN65439.1 Xyloglucan endotransglucosylase/hydrolase 2 [Cucumis sativus]) HSP 1 Score: 610.9 bits (1574), Expect = 2.2e-171 Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. NCBI nr
Match: CCH26406.1 (xyloglucan endotransglycosylase [Cucumis sativus]) HSP 1 Score: 607.4 bits (1565), Expect = 2.4e-170 Identity = 285/287 (99.30%), Postives = 286/287 (99.65%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. NCBI nr
Match: NP_001284442.1 (xyloglucan endotransglucosylase/hydrolase protein 22-like precursor [Cucumis melo] >ABI94062.1 xyloglucan endotransglucosylase/hydrolase 2 [Cucumis melo]) HSP 1 Score: 583.2 bits (1502), Expect = 4.9e-163 Identity = 273/286 (95.45%), Postives = 278/286 (97.20%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. NCBI nr
Match: XP_022987546.1 (xyloglucan endotransglucosylase/hydrolase protein 22-like [Cucurbita maxima]) HSP 1 Score: 556.6 bits (1433), Expect = 4.9e-155 Identity = 260/278 (93.53%), Postives = 268/278 (96.40%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. NCBI nr
Match: XP_023515443.1 (xyloglucan endotransglucosylase/hydrolase protein 22-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 553.9 bits (1426), Expect = 3.2e-154 Identity = 259/279 (92.83%), Postives = 267/279 (95.70%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. TAIR10
Match: AT5G57560.1 (Xyloglucan endotransglucosylase/hydrolase family protein) HSP 1 Score: 446.4 bits (1147), Expect = 1.3e-125 Identity = 213/281 (75.80%), Postives = 232/281 (82.56%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. TAIR10
Match: AT4G25810.1 (xyloglucan endotransglycosylase 6) HSP 1 Score: 441.4 bits (1134), Expect = 4.2e-124 Identity = 211/279 (75.63%), Postives = 230/279 (82.44%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. TAIR10
Match: AT5G57550.1 (xyloglucan endotransglucosylase/hydrolase 25) HSP 1 Score: 429.1 bits (1102), Expect = 2.2e-120 Identity = 201/283 (71.02%), Postives = 228/283 (80.57%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. TAIR10
Match: AT4G30270.1 (xyloglucan endotransglucosylase/hydrolase 24) HSP 1 Score: 415.6 bits (1067), Expect = 2.5e-116 Identity = 193/283 (68.20%), Postives = 221/283 (78.09%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. TAIR10
Match: AT5G48070.1 (xyloglucan endotransglucosylase/hydrolase 20) HSP 1 Score: 412.5 bits (1059), Expect = 2.1e-115 Identity = 186/279 (66.67%), Postives = 226/279 (81.00%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. Swiss-Prot
Match: sp|Q38857|XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana OX=3702 GN=XTH22 PE=1 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 2.4e-124 Identity = 213/281 (75.80%), Postives = 232/281 (82.56%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. Swiss-Prot
Match: sp|Q38910|XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana OX=3702 GN=XTH23 PE=2 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 7.6e-123 Identity = 211/279 (75.63%), Postives = 230/279 (82.44%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. Swiss-Prot
Match: sp|Q38907|XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana OX=3702 GN=XTH25 PE=2 SV=2) HSP 1 Score: 429.1 bits (1102), Expect = 3.9e-119 Identity = 201/283 (71.02%), Postives = 228/283 (80.57%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. Swiss-Prot
Match: sp|P24806|XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana OX=3702 GN=XTH24 PE=1 SV=2) HSP 1 Score: 415.6 bits (1067), Expect = 4.4e-115 Identity = 193/283 (68.20%), Postives = 221/283 (78.09%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. Swiss-Prot
Match: sp|Q9FI31|XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana OX=3702 GN=XTH20 PE=2 SV=1) HSP 1 Score: 412.5 bits (1059), Expect = 3.8e-114 Identity = 186/279 (66.67%), Postives = 226/279 (81.00%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. TrEMBL
Match: tr|A0A0A0LWT1|A0A0A0LWT1_CUCSA (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=Csa_1G422480 PE=3 SV=1) HSP 1 Score: 610.9 bits (1574), Expect = 1.5e-171 Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. TrEMBL
Match: tr|N0DX33|N0DX33_CUCSA (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=xth6 PE=3 SV=1) HSP 1 Score: 607.4 bits (1565), Expect = 1.6e-170 Identity = 285/287 (99.30%), Postives = 286/287 (99.65%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. TrEMBL
Match: tr|Q06BI5|Q06BI5_CUCME (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo OX=3656 GN=XTH2 PE=2 SV=1) HSP 1 Score: 583.2 bits (1502), Expect = 3.3e-163 Identity = 273/286 (95.45%), Postives = 278/286 (97.20%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. TrEMBL
Match: tr|V4U1H8|V4U1H8_9ROSI (Xyloglucan endotransglucosylase/hydrolase OS=Citrus clementina OX=85681 GN=CICLE_v10008951mg PE=3 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 1.2e-128 Identity = 220/282 (78.01%), Postives = 236/282 (83.69%), Query Frame = 0
BLAST of CsaV3_1G031430 vs. TrEMBL
Match: tr|V4UQS4|V4UQS4_9ROSI (Xyloglucan endotransglucosylase/hydrolase OS=Citrus clementina OX=85681 GN=CICLE_v10008778mg PE=3 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 1.5e-128 Identity = 219/282 (77.66%), Postives = 236/282 (83.69%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |