CsaV3_1G031410 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G031410
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 18563921 .. 18564088 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGTGGAAACAAAGCCTTGGGAAGAGGTGAAGAAGCTGTAAAGGAGAAAAAAGATGCGGTTTTTGTGATGAAGGATGAAGGGTTTACTGCAGACACCAGCTGTAACCTGCCCTTTGCCAAATTTGCCACTTTCTTCAACCATTGGAATTCTCAGCATGTATAA

mRNA sequence

ATGGTGGGTGGAAACAAAGCCTTGGGAAGAGGTGAAGAAGCTGTAAAGGAGAAAAAAGATGCGGTTTTTGTGATGAAGGATGAAGGGTTTACTGCAGACACCAGCTGTAACCTGCCCTTTGCCAAATTTGCCACTTTCTTCAACCATTGGAATTCTCAGCATGTATAA

Coding sequence (CDS)

ATGGTGGGTGGAAACAAAGCCTTGGGAAGAGGTGAAGAAGCTGTAAAGGAGAAAAAAGATGCGGTTTTTGTGATGAAGGATGAAGGGTTTACTGCAGACACCAGCTGTAACCTGCCCTTTGCCAAATTTGCCACTTTCTTCAACCATTGGAATTCTCAGCATGTATAA

Protein sequence

MVGGNKALGRGEEAVKEKKDAVFVMKDEGFTADTSCNLPFAKFATFFNHWNSQHV
BLAST of CsaV3_1G031410 vs. NCBI nr
Match: KGN65437.1 (hypothetical protein Csa_1G422460 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 6.7e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MVGGNKALGRGEEAVKEKKDAVFVMKDEGFTADTSCNLPFAKFATFFNHWNSQHV 56
          MVGGNKALGRGEEAVKEKKDAVFVMKDEGFTADTSCNLPFAKFATFFNHWNSQHV
Sbjct: 1  MVGGNKALGRGEEAVKEKKDAVFVMKDEGFTADTSCNLPFAKFATFFNHWNSQHV 55

BLAST of CsaV3_1G031410 vs. TrEMBL
Match: tr|A0A0A0LX72|A0A0A0LX72_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G422460 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.4e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MVGGNKALGRGEEAVKEKKDAVFVMKDEGFTADTSCNLPFAKFATFFNHWNSQHV 56
          MVGGNKALGRGEEAVKEKKDAVFVMKDEGFTADTSCNLPFAKFATFFNHWNSQHV
Sbjct: 1  MVGGNKALGRGEEAVKEKKDAVFVMKDEGFTADTSCNLPFAKFATFFNHWNSQHV 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN65437.16.7e-24100.00hypothetical protein Csa_1G422460 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LX72|A0A0A0LX72_CUCSA4.4e-24100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G422460 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G031410.1CsaV3_1G031410.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None