CsaV3_1G031360 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G031360
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	F-box protein PP2-B10-like
Location	chr1 : 18541512 .. 18542755 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAGTTCTCTTCGCTACCGGAGGGAGTAATAGCCAACATCTTGTCACTGACGTCTCCATTGGATAACTGCCGGTTATCGGCGGTTTCCTGGACTTTTCATGCGGCGGCCCAGTCTGATGTTGCCTGGGAGAGGTTTATTCCTTCAGATTACCACCTTTTAATCTCTCGGATGAATCCTACCTCCAGTTCCAAGAAGGATATTTTCTTCTCCCTTTCCGATACTCCGCTGCTCATTGATGACGGCAAACAGGTAACCTCCCCATTTCCTCAATTTCTCTAAACTAAAATCGGAGTTTTATGACTTCTCGGCCGACTAAAGGCCTTTTAAGTAGAGGGTTTATGTATACCCTACCCTTTCTAAACCCTAAGTTCAAACTTGTAATAACTATAAACAAATAGAAATTAGGTTAGTCATTGGGAGGTCGAAGGCATTCTGACGCACACATTGTGCATATTATTTGATAGAATACACACTTGTACCAGTCTTATTAACAAATCATCAGAATGCCATTGGTTTATATGTACATTTTTGTCACTTGTTGAATCAGCTCTGAAGTTGTCCTGTATTCTCTCTTTTGTATTATATTCTTCAATAATTCGTATGTGGCAGAGCTTTTCATTGGACATATGGAGTGGAAAAAAATGCATAATGCTCGGAGCAAGGGACCTGTCGATTTCTGGGAGTGATACCTCTTCCCTTTGGAAATGGGTACCTCATCAAGGGTCAAGGTTTTAAGTCTAGTGATACCTCTTCCCTTGAGAGTGGGCTTGAGAAACAGGTTTGGAGAGGTAGTCGTGCTACTCGACATATGTTTGCTTGAAGTAAGTGGAAAGATAAGTTGCAGAATGTTGTCTCCTGCAACAACTTATGCAGCTTACTTTGTGTTTAAGATGAAGAAACGCAAGTACTATGGATTCAATCTTGATCCTGTGGAGGCCATGTTGGGAGTTGTTGGCGATGATTGTCATGGTAAGAATGTTTGTTTGGACCCTGACTTGGATAGCCCATCTTGGTTGCACCAGTTTCTACCGTGGGCAGAGAGCAATCAGAACATGTCGGAGTTCGAGCAGCCAAACTGGAGATCTGATGGCTTGTTCGAAATTGAGTTAGGAGAGTTTCAAACTAATGGGAAAGATGATGAAGTTGAGGTCATTCTTAGGGAGGACAATCGTTGTTCTCCCAAGAGTGGCCTTGTCGTCGTGGGGATAGATATCCGGCCTAAAACTAGCCCTGCTTAG

mRNA sequence

ATGGTTGAGTTCTCTTCGCTACCGGAGGGAGTAATAGCCAACATCTTGTCACTGACGTCTCCATTGGATAACTGCCGGTTATCGGCGGTTTCCTGGACTTTTCATGCGGCGGCCCAGTCTGATGTTGCCTGGGAGAGGTTTATTCCTTCAGATTACCACCTTTTAATCTCTCGGATGAATCCTACCTCCAGTTCCAAGAAGGATATTTTCTTCTCCCTTTCCGATACTCCGCTGCTCATTGATGACGGCAAACAGAGCTTTTCATTGGACATATGGAGTGGAAAAAAATGCATAATGCTCGGAGCAAGGGACCTGTCGATTTCTGGGAGTGATACCTCTTCCCTTTGGAAATGGGTACCTCATCAAGGGTCAAGAATGTTGTCTCCTGCAACAACTTATGCAGCTTACTTTGTGTTTAAGATGAAGAAACGCAAGTACTATGGATTCAATCTTGATCCTGTGGAGGCCATGTTGGGAGTTGTTGGCGATGATTGTCATGGTAAGAATGTTTGTTTGGACCCTGACTTGGATAGCCCATCTTGGTTGCACCAGTTTCTACCGTGGGCAGAGAGCAATCAGAACATGTCGGAGTTCGAGCAGCCAAACTGGAGATCTGATGGCTTGTTCGAAATTGAGTTAGGAGAGTTTCAAACTAATGGGAAAGATGATGAAGTTGAGGTCATTCTTAGGGAGGACAATCGTTGTTCTCCCAAGAGTGGCCTTGTCGTCGTGGGGATAGATATCCGGCCTAAAACTAGCCCTGCTTAG

Coding sequence (CDS)

ATGGTTGAGTTCTCTTCGCTACCGGAGGGAGTAATAGCCAACATCTTGTCACTGACGTCTCCATTGGATAACTGCCGGTTATCGGCGGTTTCCTGGACTTTTCATGCGGCGGCCCAGTCTGATGTTGCCTGGGAGAGGTTTATTCCTTCAGATTACCACCTTTTAATCTCTCGGATGAATCCTACCTCCAGTTCCAAGAAGGATATTTTCTTCTCCCTTTCCGATACTCCGCTGCTCATTGATGACGGCAAACAGAGCTTTTCATTGGACATATGGAGTGGAAAAAAATGCATAATGCTCGGAGCAAGGGACCTGTCGATTTCTGGGAGTGATACCTCTTCCCTTTGGAAATGGGTACCTCATCAAGGGTCAAGAATGTTGTCTCCTGCAACAACTTATGCAGCTTACTTTGTGTTTAAGATGAAGAAACGCAAGTACTATGGATTCAATCTTGATCCTGTGGAGGCCATGTTGGGAGTTGTTGGCGATGATTGTCATGGTAAGAATGTTTGTTTGGACCCTGACTTGGATAGCCCATCTTGGTTGCACCAGTTTCTACCGTGGGCAGAGAGCAATCAGAACATGTCGGAGTTCGAGCAGCCAAACTGGAGATCTGATGGCTTGTTCGAAATTGAGTTAGGAGAGTTTCAAACTAATGGGAAAGATGATGAAGTTGAGGTCATTCTTAGGGAGGACAATCGTTGTTCTCCCAAGAGTGGCCTTGTCGTCGTGGGGATAGATATCCGGCCTAAAACTAGCCCTGCTTAG

Protein sequence

MVEFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMNPTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVPHQGSRMLSPATTYAAYFVFKMKKRKYYGFNLDPVEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIELGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTSPA

Homology

[Close]

BLAST of CsaV3_1G031360 vs. NCBI nr
Match: KGN65431.1 (hypothetical protein Csa_1G421910 [Cucumis sativus])

HSP 1 Score: 515.8 bits (1327), Expect = 8.6e-143
Identity = 255/283 (90.11%), Postives = 255/283 (90.11%), Query Frame = 0


Query: 1   MVEFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMN 60
           MVEFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMN
Sbjct: 26  MVEFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMN 85

Query: 61  PTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVP 120
           PTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVP
Sbjct: 86  PTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVP 145

Query: 121 HQGS----------------------------RMLSPATTYAAYFVFKMKKRKYYGFNLD 180
           HQGS                            RMLSPATTYAAYFVFKMKKRKYYGFNLD
Sbjct: 146 HQGSRVGLRNRFGEVVVLLDICLLEVSGKISCRMLSPATTYAAYFVFKMKKRKYYGFNLD 205

Query: 181 PVEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIE 240
           PVEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIE
Sbjct: 206 PVEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIE 265

Query: 241 LGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTSPA 256
           LGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTSPA
Sbjct: 266 LGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTSPA 308

[Close]

BLAST of CsaV3_1G031360 vs. NCBI nr
Match: XP_022135496.1 (F-box protein PP2-B10-like [Momordica charantia])

HSP 1 Score: 310.8 bits (795), Expect = 4.2e-81
Identity = 163/284 (57.39%), Postives = 198/284 (69.72%), Query Frame = 0


Query: 3   EFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISR---- 62
           +FS LPEGVIANILSLT+P D CR S VSWTFHAAAQSD+ W+RF+P+D+H L+SR    
Sbjct: 22  DFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSDIVWDRFLPTDWHDLVSRAKPS 81

Query: 63  ---MNPTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSL 122
               +P SSSKK+IFFSL D PLLIDDGK+SFSLD  SGKKCIMLGARDLS+   DTS  
Sbjct: 82  DLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSGKKCIMLGARDLSVVWGDTSFY 141

Query: 123 WKWVPHQGS----------------------RMLSPATTYAAYFVFKMKKRKYYGFNLDP 182
           W W  H  S                      RMLSPATTYAAYFVFKM+KR+YYGFN+DP
Sbjct: 142 WTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAYFVFKMRKRRYYGFNVDP 201

Query: 183 VEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWA--ESNQNMSEFEQPNWRSDGLFEI 242
            +AM+G  G +   K+VCLDP +D+P    + +P A  +  ++M   E+P  R DG FEI
Sbjct: 202 ADAMVGTGGTENRSKSVCLDPFIDNPLRRRRHVPLAVDQPPESMEGSERPKQRHDGWFEI 261

Query: 243 ELGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTSPA 256
           ELGEFQ++  DDE+E++L E    +PKSGLVV GI+IRPK SP+
Sbjct: 262 ELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKISPS 305

[Close]

BLAST of CsaV3_1G031360 vs. NCBI nr
Match: XP_022134921.1 (F-box protein PP2-B10-like isoform X1 [Momordica charantia])

HSP 1 Score: 298.1 bits (762), Expect = 2.8e-77
Identity = 163/285 (57.19%), Postives = 193/285 (67.72%), Query Frame = 0


Query: 1   MVEFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISR-- 60
           + +FSSLPEGVIANILSLT P D CR S VS  FHAAAQSD+ W+RF+P+D++ LI R  
Sbjct: 34  IADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDRFLPTDWYDLICRRK 93

Query: 61  -----MNPTSSSKKDIFFSLSDTPLLIDDGKQ-SFSLDIWSGKKCIMLGARDLSISGSDT 120
                ++P SSSKK+IFFSL D PLL DDGK+ SFSLD WSGKKCIMLGARDLSI   DT
Sbjct: 94  PSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCIMLGARDLSIVWGDT 153

Query: 121 SSLWKWVPHQGSR----------------------MLSPATTYAAYFVFKMKKRKYYGFN 180
           S  W W  H  SR                      MLSPATTYAAYFVF+M++R+YYGFN
Sbjct: 154 SVYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYAAYFVFRMRERRYYGFN 213

Query: 181 LDPVEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESN--QNMSEFEQPNWRSDGL 240
           +DPV+AM+G+VG +   K+VCLDP LD P    + +P A +N  +NMS  EQP  R DG 
Sbjct: 214 IDPVDAMVGIVGSEYCMKSVCLDPYLDDPHQRRRRVPRAGNNLPENMSGLEQPRERDDGW 273

Query: 241 FEIELGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTS 254
           FE ELGEF  +G DDEVE+IL+E      K  LVV GI IRPK +
Sbjct: 274 FETELGEFHIDGGDDEVEMILKEVKCNDSKRVLVVQGIQIRPKVN 318

[Close]

BLAST of CsaV3_1G031360 vs. NCBI nr
Match: XP_022134922.1 (F-box protein PP2-B10-like isoform X2 [Momordica charantia])

HSP 1 Score: 298.1 bits (762), Expect = 2.8e-77
Identity = 163/285 (57.19%), Postives = 193/285 (67.72%), Query Frame = 0


Query: 1   MVEFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISR-- 60
           + +FSSLPEGVIANILSLT P D CR S VS  FHAAAQSD+ W+RF+P+D++ LI R  
Sbjct: 14  IADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDRFLPTDWYDLICRRK 73

Query: 61  -----MNPTSSSKKDIFFSLSDTPLLIDDGKQ-SFSLDIWSGKKCIMLGARDLSISGSDT 120
                ++P SSSKK+IFFSL D PLL DDGK+ SFSLD WSGKKCIMLGARDLSI   DT
Sbjct: 74  PSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCIMLGARDLSIVWGDT 133

Query: 121 SSLWKWVPHQGSR----------------------MLSPATTYAAYFVFKMKKRKYYGFN 180
           S  W W  H  SR                      MLSPATTYAAYFVF+M++R+YYGFN
Sbjct: 134 SVYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYAAYFVFRMRERRYYGFN 193

Query: 181 LDPVEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESN--QNMSEFEQPNWRSDGL 240
           +DPV+AM+G+VG +   K+VCLDP LD P    + +P A +N  +NMS  EQP  R DG 
Sbjct: 194 IDPVDAMVGIVGSEYCMKSVCLDPYLDDPHQRRRRVPRAGNNLPENMSGLEQPRERDDGW 253

Query: 241 FEIELGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTS 254
           FE ELGEF  +G DDEVE+IL+E      K  LVV GI IRPK +
Sbjct: 254 FETELGEFHIDGGDDEVEMILKEVKCNDSKRVLVVQGIQIRPKVN 298

[Close]

BLAST of CsaV3_1G031360 vs. NCBI nr
Match: XP_008453629.1 (PREDICTED: F-box protein PP2-B10-like isoform X1 [Cucumis melo] >XP_016901363.1 PREDICTED: F-box protein PP2-B10-like isoform X1 [Cucumis melo])

HSP 1 Score: 289.7 bits (740), Expect = 1.0e-74
Identity = 155/284 (54.58%), Postives = 188/284 (66.20%), Query Frame = 0


Query: 3   EFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISR---- 62
           + SSLPEGVIANILSLT+PLD CR SAVSW FHAAAQSD+ W+RF+P+D   LISR    
Sbjct: 9   DVSSLPEGVIANILSLTTPLDACRSSAVSWVFHAAAQSDIVWDRFLPNDLDDLISRSKPG 68

Query: 63  ---MNPTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSL 122
               +P +SSKK+IFFSL ++PLLID+ K+S SLD  SGKKC+MLGARDLSI   DTS  
Sbjct: 69  GLNFDPITSSKKEIFFSLCNSPLLIDNAKKSLSLDKQSGKKCLMLGARDLSIVWDDTSVY 128

Query: 123 WKWVPHQ----------------------GSRMLSPATTYAAYFVFKMKKRKYYGFNLDP 182
           W W  H                        SR+LSP TTYAAY VFKM++R+Y+GFN+D 
Sbjct: 129 WTWESHPESRFGEVVVIFKAWWLEIRGKISSRLLSPTTTYAAYIVFKMRERRYFGFNIDF 188

Query: 183 VEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESN---QNMSEFEQPNWRSDGLFE 242
           V+AM+G+VG +   K VCLDP LD P    + +P A SN    NMS  E+P  R D  FE
Sbjct: 189 VDAMVGIVGSEHSVKTVCLDPYLDDPLQRRRHVPQAGSNLTTNNMSRLEEPRGRDDDWFE 248

Query: 243 IELGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTSP 255
            ELGEF   G DDEVE+IL++      K+ LVV GI+IRPK +P
Sbjct: 249 TELGEFDNKGGDDEVEIILKDLKCTDSKNSLVVQGIEIRPKINP 292

[Close]

BLAST of CsaV3_1G031360 vs. TAIR10
Match: AT2G02340.1 (phloem protein 2-B8)

HSP 1 Score: 164.9 bits (416), Expect = 6.7e-41
Identity = 100/279 (35.84%), Postives = 149/279 (53.41%), Query Frame = 0


Query: 1   MVEFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMN 60
           + E   LPE  ++ I+S TSP D C L++VS TF +A +SD+ WE+FIP +Y  LIS+  
Sbjct: 33  VAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSR 92

Query: 61  PTS-SSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWV 120
                SKK+++F+L D  +LIDDGK+S  ++  + K+CIM+ A +L+I+  ++   W+W+
Sbjct: 93  AFKFLSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWI 152

Query: 121 PHQ----------------------GSRMLSPATTYAAYFVFKMKKRKYYGFNLDPVEAM 180
           P                         SR++SP T Y+AY V+K K    YGF    VE +
Sbjct: 153 PDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYK-KLNICYGFENVAVEVV 212

Query: 181 LGVVGDDCH---GKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIELG 240
           +GVVG D      + +C D  +D      QF              +P  R DG  EI++G
Sbjct: 213 VGVVGQDLEESCRRYICFDETMD-----EQF----RRRDRGKNLVKPERRKDGWMEIKIG 272

Query: 241 EFQTNG---KDDEVEVILREDNRCSPKSGLVVVGIDIRP 251
           EF   G    DDE+E++  E  +   K GL++ GI+IRP
Sbjct: 273 EFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of CsaV3_1G031360 vs. TAIR10
Match: AT2G02360.1 (phloem protein 2-B10)

HSP 1 Score: 164.9 bits (416), Expect = 6.7e-41
Identity = 99/272 (36.40%), Postives = 142/272 (52.21%), Query Frame = 0


Query: 4   FSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMNPTS 63
           F S PE  I+ I+S T+P D C  + VS TF +  +SD+ WE+F+P+DY  LI   +   
Sbjct: 14  FDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIP-PSRVF 73

Query: 64  SSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVP--- 123
           SSKK+++FSL + P+L DD K+S  L+  SGK+C+ML A +LSI   D    W+W+P   
Sbjct: 74  SSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPE 133

Query: 124 -------------------HQGSRMLSPATTYAAYFVFKMKKRKYYGFNLDPVEAMLGVV 183
                                 +R+LSP T Y+AY VFK    K YGF    +EA +GVV
Sbjct: 134 SRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFK-GVDKCYGFQNVAIEAAVGVV 193

Query: 184 GDDCHGKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIELGEFQTNG- 243
           G +   + +C    +                +      +P  R DG  EIELGEF  +G 
Sbjct: 194 GQEPSRRLICFSEAI---------------RRGRRNVVKPKQREDGWMEIELGEFFNDGG 253

Query: 244 --KDDEVEVILREDNRCSPKSGLVVVGIDIRP 251
              +DE+E+   E  + + K GL++ GI+IRP
Sbjct: 254 IMDNDEIEMSALETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of CsaV3_1G031360 vs. TAIR10
Match: AT2G02240.1 (F-box family protein)

HSP 1 Score: 162.5 bits (410), Expect = 3.3e-40
Identity = 98/272 (36.03%), Postives = 143/272 (52.57%), Query Frame = 0


Query: 4   FSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMNPTS 63
           F  LPE  I+NI+S TSP D C  ++VS TF +A  SD  W++F+P +Y  L+SR +   
Sbjct: 61  FDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSR-SRVF 120

Query: 64  SSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVP--- 123
           +SKK+++F+L   P+LI+DGK+SF L+  SGK+CIML +++L I+   +   W+W+    
Sbjct: 121 ASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPE 180

Query: 124 -------------------HQGSRMLSPATTYAAYFVFKMKKRKYYGFNLDPVEAMLGVV 183
                                 +R+LSP T Y+AY VFK K R   G    PVE  LG+V
Sbjct: 181 SRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDR-CPGLGHLPVEVGLGLV 240

Query: 184 GDDCHGKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIELGEFQTNGK 243
           G +   + +      D               +   +  +P+ R DG  E ELGEF    +
Sbjct: 241 GQESSKRFIYFIGPRD-----------RRGRRETRDVTKPDQREDGWMEAELGEFFNEER 300

Query: 244 DDEVEVILREDNRCSPKSGLVVVGIDIRPKTS 254
            DE+E  + E    S KSGL++ GI+ RP  S
Sbjct: 301 CDEIEFSVIEIKSPSWKSGLIIQGIEFRPTKS 319

[Close]

BLAST of CsaV3_1G031360 vs. TAIR10
Match: AT2G02230.1 (phloem protein 2-B1)

HSP 1 Score: 159.5 bits (402), Expect = 2.8e-39
Identity = 106/305 (34.75%), Postives = 156/305 (51.15%), Query Frame = 0


Query: 4   FSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMNPTS 63
           F +LPE  I+ ++S TSP D C +++VS +  +AAQSD+ WE F+PS+Y  L+ + +   
Sbjct: 32  FDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQ-SANH 91

Query: 64  SSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVPHQG 123
            SKK+IF SL+D  +L+++GK+SF ++  SGKKC ML A +L+I   D+ + WKW+    
Sbjct: 92  LSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPE 151

Query: 124 SR----------------------MLSPATTYAAYFVFKMKKRKYYGFNLDPVEAMLGVV 183
           S+                      MLS  T Y+ Y VFK    + YGF+L PVEA +G V
Sbjct: 152 SKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFV 211

Query: 184 GDDCHGKNVCLDP-DLDSPSWLHQF---------------LPWAESNQNMSEFEQ----- 243
           G     K+V  +  + DS S    +                PW +  +            
Sbjct: 212 GKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQRXXXXXXXXXXXX 271

Query: 244 ------PNWRSDGLFEIELGEFQTN----GKD--DEVEVILREDNRCSPKSGLVVVGIDI 254
                 P  R DG  E+ELG+F  N    G D  DE+E+ + E    + KSGL++ GI+I
Sbjct: 272 GMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQGIEI 331

[Close]

BLAST of CsaV3_1G031360 vs. TAIR10
Match: AT5G24560.1 (phloem protein 2-B12)

HSP 1 Score: 149.1 bits (375), Expect = 3.8e-36
Identity = 97/272 (35.66%), Postives = 132/272 (48.53%), Query Frame = 0


Query: 2   VEFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMNP 61
           + F  LPE  IA ++S TSP D CR+SAVS    +AA S+  WERF+PSDY + I   + 
Sbjct: 1   MNFLDLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDN-SL 60

Query: 62  TSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVPH 121
           +  S K +F    ++PLLI+DG+ SF ++  SGKKC ML AR L I   D+   W WV  
Sbjct: 61  SRFSNKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSI 120

Query: 122 QGSR----------------------MLSPATTYAAYFVFKMKKRKYYGFNLDPVEAMLG 181
             SR                      +LS AT Y+AY VFK ++   +GF   P+E    
Sbjct: 121 PDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFKEQEMGSFGFESLPLEVSFR 180

Query: 182 VVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIELGEFQTN 241
               + +                  FL   +S    S       R DG  EIELGE+   
Sbjct: 181 STRTEVYNNR-------------RVFL---KSGTQES-------REDGWLEIELGEYYVG 240

Query: 242 GKDDEVEVILREDNRCSPKSGLVVVGIDIRPK 252
             D+E+E+ + E      K G++V GI+IRPK
Sbjct: 241 FDDEEIEMSVLETREGGWKGGIIVQGIEIRPK 248

[Close]

BLAST of CsaV3_1G031360 vs. Swiss-Prot
Match: sp|Q9ZVQ6|P2B10_ARATH (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.2e-39
Identity = 99/272 (36.40%), Postives = 142/272 (52.21%), Query Frame = 0


Query: 4   FSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMNPTS 63
           F S PE  I+ I+S T+P D C  + VS TF +  +SD+ WE+F+P+DY  LI   +   
Sbjct: 14  FDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIP-PSRVF 73

Query: 64  SSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVP--- 123
           SSKK+++FSL + P+L DD K+S  L+  SGK+C+ML A +LSI   D    W+W+P   
Sbjct: 74  SSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPE 133

Query: 124 -------------------HQGSRMLSPATTYAAYFVFKMKKRKYYGFNLDPVEAMLGVV 183
                                 +R+LSP T Y+AY VFK    K YGF    +EA +GVV
Sbjct: 134 SRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFK-GVDKCYGFQNVAIEAAVGVV 193

Query: 184 GDDCHGKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIELGEFQTNG- 243
           G +   + +C    +                +      +P  R DG  EIELGEF  +G 
Sbjct: 194 GQEPSRRLICFSEAI---------------RRGRRNVVKPKQREDGWMEIELGEFFNDGG 253

Query: 244 --KDDEVEVILREDNRCSPKSGLVVVGIDIRP 251
              +DE+E+   E  + + K GL++ GI+IRP
Sbjct: 254 IMDNDEIEMSALETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of CsaV3_1G031360 vs. Swiss-Prot
Match: sp|Q9ZVQ8|PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.2e-39
Identity = 100/279 (35.84%), Postives = 149/279 (53.41%), Query Frame = 0


Query: 1   MVEFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMN 60
           + E   LPE  ++ I+S TSP D C L++VS TF +A +SD+ WE+FIP +Y  LIS+  
Sbjct: 33  VAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSR 92

Query: 61  PTS-SSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWV 120
                SKK+++F+L D  +LIDDGK+S  ++  + K+CIM+ A +L+I+  ++   W+W+
Sbjct: 93  AFKFLSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWI 152

Query: 121 PHQ----------------------GSRMLSPATTYAAYFVFKMKKRKYYGFNLDPVEAM 180
           P                         SR++SP T Y+AY V+K K    YGF    VE +
Sbjct: 153 PDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYK-KLNICYGFENVAVEVV 212

Query: 181 LGVVGDDCH---GKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIELG 240
           +GVVG D      + +C D  +D      QF              +P  R DG  EI++G
Sbjct: 213 VGVVGQDLEESCRRYICFDETMD-----EQF----RRRDRGKNLVKPERRKDGWMEIKIG 272

Query: 241 EFQTNG---KDDEVEVILREDNRCSPKSGLVVVGIDIRP 251
           EF   G    DDE+E++  E  +   K GL++ GI+IRP
Sbjct: 273 EFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of CsaV3_1G031360 vs. Swiss-Prot
Match: sp|Q9FV02|SKIP3_ARATH (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 2.7e-39
Identity = 101/271 (37.27%), Postives = 144/271 (53.14%), Query Frame = 0


Query: 6   SLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMNPTSSS 65
           SLPEG I+NI+S TSP D C  +AVS  F +A +SD+ WE+F+P+DY  LI+  +   SS
Sbjct: 26  SLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLIT-PSRVFSS 85

Query: 66  KKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISG-SDTSSLWKWVP---- 125
           KK+++FSL + PLLI+DGK S  L+  SGK+CIML A  +++S  +D S  + W+P    
Sbjct: 86  KKELYFSLCNDPLLIEDGKMSLWLEKASGKRCIMLSATAMNLSSMADMSQRFLWIPCPES 145

Query: 126 ------------------HQGSRMLSPATTYAAYFVFKMKKRKYYGFNLDPVEAMLGVVG 185
                                +R+LS  T Y+ Y VFK K   + GF    +EA++G+VG
Sbjct: 146 RFETVAALREAYRFEFNCRMNTRVLSLRTRYSVYIVFK-KADNWCGFKGVSIEAVVGIVG 205

Query: 186 DDCHGKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIELGEFQTNG-- 245
           ++     +C D      +            +      +P  R DG  E E+GEF   G  
Sbjct: 206 EESFRSFICFDTHGKGQA------------RKRKVVAKPELREDGWMETEIGEFYNEGGL 265

Query: 246 -KDDEVEVILREDNRCSPKSGLVVVGIDIRP 251
              DEVE+   E      K GLV++GI+IRP
Sbjct: 266 MSSDEVEISTVEGKYAQQKRGLVILGIEIRP 282

[Close]

BLAST of CsaV3_1G031360 vs. Swiss-Prot
Match: sp|Q3E6P4|FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 6.0e-39
Identity = 98/272 (36.03%), Postives = 143/272 (52.57%), Query Frame = 0


Query: 4   FSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMNPTS 63
           F  LPE  I+NI+S TSP D C  ++VS TF +A  SD  W++F+P +Y  L+SR +   
Sbjct: 61  FDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSR-SRVF 120

Query: 64  SSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVP--- 123
           +SKK+++F+L   P+LI+DGK+SF L+  SGK+CIML +++L I+   +   W+W+    
Sbjct: 121 ASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPE 180

Query: 124 -------------------HQGSRMLSPATTYAAYFVFKMKKRKYYGFNLDPVEAMLGVV 183
                                 +R+LSP T Y+AY VFK K R   G    PVE  LG+V
Sbjct: 181 SRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDR-CPGLGHLPVEVGLGLV 240

Query: 184 GDDCHGKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIELGEFQTNGK 243
           G +   + +      D               +   +  +P+ R DG  E ELGEF    +
Sbjct: 241 GQESSKRFIYFIGPRD-----------RRGRRETRDVTKPDQREDGWMEAELGEFFNEER 300

Query: 244 DDEVEVILREDNRCSPKSGLVVVGIDIRPKTS 254
            DE+E  + E    S KSGL++ GI+ RP  S
Sbjct: 301 CDEIEFSVIEIKSPSWKSGLIIQGIEFRPTKS 319

[Close]

BLAST of CsaV3_1G031360 vs. Swiss-Prot
Match: sp|Q6NPT8|PP2B1_ARATH (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.1e-38
Identity = 106/305 (34.75%), Postives = 156/305 (51.15%), Query Frame = 0


Query: 4   FSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMNPTS 63
           F +LPE  I+ ++S TSP D C +++VS +  +AAQSD+ WE F+PS+Y  L+ + +   
Sbjct: 32  FDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQ-SANH 91

Query: 64  SSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVPHQG 123
            SKK+IF SL+D  +L+++GK+SF ++  SGKKC ML A +L+I   D+ + WKW+    
Sbjct: 92  LSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPE 151

Query: 124 SR----------------------MLSPATTYAAYFVFKMKKRKYYGFNLDPVEAMLGVV 183
           S+                      MLS  T Y+ Y VFK    + YGF+L PVEA +G V
Sbjct: 152 SKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFV 211

Query: 184 GDDCHGKNVCLDP-DLDSPSWLHQF---------------LPWAESNQNMSEFEQ----- 243
           G     K+V  +  + DS S    +                PW +  +            
Sbjct: 212 GKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQRXXXXXXXXXXXX 271

Query: 244 ------PNWRSDGLFEIELGEFQTN----GKD--DEVEVILREDNRCSPKSGLVVVGIDI 254
                 P  R DG  E+ELG+F  N    G D  DE+E+ + E    + KSGL++ GI+I
Sbjct: 272 GMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQGIEI 331

[Close]

BLAST of CsaV3_1G031360 vs. TrEMBL
Match: tr|A0A0A0LZQ3|A0A0A0LZQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421910 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 5.7e-143
Identity = 255/283 (90.11%), Postives = 255/283 (90.11%), Query Frame = 0


Query: 1   MVEFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMN 60
           MVEFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMN
Sbjct: 26  MVEFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISRMN 85

Query: 61  PTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVP 120
           PTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVP
Sbjct: 86  PTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLWKWVP 145

Query: 121 HQGS----------------------------RMLSPATTYAAYFVFKMKKRKYYGFNLD 180
           HQGS                            RMLSPATTYAAYFVFKMKKRKYYGFNLD
Sbjct: 146 HQGSRVGLRNRFGEVVVLLDICLLEVSGKISCRMLSPATTYAAYFVFKMKKRKYYGFNLD 205

Query: 181 PVEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIE 240
           PVEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIE
Sbjct: 206 PVEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESNQNMSEFEQPNWRSDGLFEIE 265

Query: 241 LGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTSPA 256
           LGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTSPA
Sbjct: 266 LGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTSPA 308

[Close]

BLAST of CsaV3_1G031360 vs. TrEMBL
Match: tr|A0A1S4DZG4|A0A1S4DZG4_CUCME (F-box protein PP2-B10-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494286 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 6.6e-75
Identity = 155/284 (54.58%), Postives = 188/284 (66.20%), Query Frame = 0


Query: 3   EFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISR---- 62
           + SSLPEGVIANILSLT+PLD CR SAVSW FHAAAQSD+ W+RF+P+D   LISR    
Sbjct: 9   DVSSLPEGVIANILSLTTPLDACRSSAVSWVFHAAAQSDIVWDRFLPNDLDDLISRSKPG 68

Query: 63  ---MNPTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSL 122
               +P +SSKK+IFFSL ++PLLID+ K+S SLD  SGKKC+MLGARDLSI   DTS  
Sbjct: 69  GLNFDPITSSKKEIFFSLCNSPLLIDNAKKSLSLDKQSGKKCLMLGARDLSIVWDDTSVY 128

Query: 123 WKWVPHQ----------------------GSRMLSPATTYAAYFVFKMKKRKYYGFNLDP 182
           W W  H                        SR+LSP TTYAAY VFKM++R+Y+GFN+D 
Sbjct: 129 WTWESHPESRFGEVVVIFKAWWLEIRGKISSRLLSPTTTYAAYIVFKMRERRYFGFNIDF 188

Query: 183 VEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESN---QNMSEFEQPNWRSDGLFE 242
           V+AM+G+VG +   K VCLDP LD P    + +P A SN    NMS  E+P  R D  FE
Sbjct: 189 VDAMVGIVGSEHSVKTVCLDPYLDDPLQRRRHVPQAGSNLTTNNMSRLEEPRGRDDDWFE 248

Query: 243 IELGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTSP 255
            ELGEF   G DDEVE+IL++      K+ LVV GI+IRPK +P
Sbjct: 249 TELGEFDNKGGDDEVEIILKDLKCTDSKNSLVVQGIEIRPKINP 292

[Close]

BLAST of CsaV3_1G031360 vs. TrEMBL
Match: tr|A0A0A0LU29|A0A0A0LU29_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421900 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.8e-72
Identity = 155/283 (54.77%), Postives = 185/283 (65.37%), Query Frame = 0


Query: 4   FSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISR----- 63
           FSSLPEGVIANILSLT+PLD CR SAVS  FHAAAQSD+ W+ F+P+D    ISR     
Sbjct: 10  FSSLPEGVIANILSLTTPLDVCRSSAVSRAFHAAAQSDIVWDTFLPNDLDDFISRSKPGG 69

Query: 64  --MNPTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSLW 123
              +P +SSKK+IFFSL ++PLLID+ K+S SLD  SGKKCIMLGARDLSI   DTS  W
Sbjct: 70  LNFDPITSSKKEIFFSLCNSPLLIDNAKKSLSLDKQSGKKCIMLGARDLSIVWDDTSVYW 129

Query: 124 KWVPHQGSR----------------------MLSPATTYAAYFVFKMKKRKYYGFNLDPV 183
            W  H  SR                      MLSP TTYAAY VFKM++R+Y+GFN+D V
Sbjct: 130 TWESHPESRFGEVVVIFKAWWLEIRGKLSSGMLSPRTTYAAYIVFKMRERRYFGFNIDFV 189

Query: 184 EAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESN---QNMSEFEQPNWRSDGLFEI 243
           +AM+G+VG +   K VCLDP LD P    + +P A SN    N+S  E P  R D  FE 
Sbjct: 190 DAMVGIVGSEHSVKTVCLDPYLDDPLQRRRHVPQAGSNLPTNNISGLEMPKGRHDDWFET 249

Query: 244 ELGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTSP 255
           ELGEF  NG DDEVE+IL++      K+ LVV GI+IRPK +P
Sbjct: 250 ELGEFDNNGGDDEVEIILKDLRCTDSKNSLVVQGIEIRPKINP 292

[Close]

BLAST of CsaV3_1G031360 vs. TrEMBL
Match: tr|A0A1S3BWT7|A0A1S3BWT7_CUCME (F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494288 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.0e-72
Identity = 152/283 (53.71%), Postives = 181/283 (63.96%), Query Frame = 0


Query: 3   EFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISR---- 62
           +FSSLPEGV+A ILS T+P D CR S VS TF AAAQSD+ W+ F+P+D+ +LISR    
Sbjct: 12  DFSSLPEGVVAKILSFTTPSDACRSSVVSTTFVAAAQSDIVWDSFLPTDWEILISRRKPS 71

Query: 63  ---MNPTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSL 122
               +P SSSKK+IFFSL DTPL+IDDG +SFSLD WSGKKCIMLGAR+LSI  SD  + 
Sbjct: 72  NLNFDPISSSKKEIFFSLCDTPLIIDDGNKSFSLDKWSGKKCIMLGARELSIIWSDMPTY 131

Query: 123 WKWVPHQGSR----------------------MLSPATTYAAYFVFKMKKRKYYGFNLDP 182
           W W PH  SR                      MLSPATTYAAYFVFKM +R+YYGF++  
Sbjct: 132 WTWEPHPESRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYFVFKMDERRYYGFDIVA 191

Query: 183 VEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFLPWAESN---QNMSEFEQPNWRSDGLFE 242
            +A + +V  +C    VCLDP LD      +  P    N    +MS  +QP  R DG FE
Sbjct: 192 ADAAVAIVDGECCSSRVCLDPFLDIAPPKRRRTPCLRRNPLGNSMSRAKQPQERHDGWFE 251

Query: 243 IELGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTS 254
           +ELGE   NG DDEVE  L+E N    KSGL+V GIDIRPK S
Sbjct: 252 LELGELHNNGGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPKIS 294

[Close]

BLAST of CsaV3_1G031360 vs. TrEMBL
Match: tr|A0A0A0LWS1|A0A0A0LWS1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421890 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69
Identity = 151/284 (53.17%), Postives = 181/284 (63.73%), Query Frame = 0


Query: 3   EFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWERFIPSDYHLLISR---- 62
           +FSSLPEGV+A ILS T+P D CR S VS TF AAAQSD+ W+ F+P+D+ +LISR    
Sbjct: 12  DFSSLPEGVVAKILSFTTPSDACRSSVVSTTFVAAAQSDIVWDSFLPTDWEILISRRKPS 71

Query: 63  ---MNPTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCIMLGARDLSISGSDTSSL 122
               +P SSSKK IFFSL DTPL+IDDG +SFSLD  SGKKCIMLGAR+LSI  SD  + 
Sbjct: 72  NLNFDPISSSKKGIFFSLCDTPLIIDDGNKSFSLDKCSGKKCIMLGARELSIIWSDMPAY 131

Query: 123 WKWVPHQGSR----------------------MLSPATTYAAYFVFKMKKRKYYGFNLDP 182
           W W PH  SR                      MLSPATTYAAYFVFKM +R+YYGF++  
Sbjct: 132 WTWEPHPESRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYFVFKMDERRYYGFDIVA 191

Query: 183 VEAMLGVVGDDCHGKNVCLDPDLD-SPSWLHQFLPWAESN---QNMSEFEQPNWRSDGLF 242
            +A + +V  +C    VCLDP L+ +P    +  P    N    +MS  +QP  R DG F
Sbjct: 192 ADAAVAIVDGECCSSRVCLDPFLENAPPKRRRRTPCLRRNPLGNSMSRAKQPQERHDGWF 251

Query: 243 EIELGEFQTNGKDDEVEVILREDNRCSPKSGLVVVGIDIRPKTS 254
           EIELGE + NG DD VE  L+E N    KSGL+V GIDIRPK S
Sbjct: 252 EIELGELRNNGGDDVVEFFLKEVNCNYSKSGLIVQGIDIRPKVS 295

The following BLAST results are available for this feature:

BLAST of CsaV3_1G031360 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65431.1	8.6e-143	90.11	hypothetical protein Csa_1G421910 [Cucumis sativus]	[more]
XP_022135496.1	4.2e-81	57.39	F-box protein PP2-B10-like [Momordica charantia]	[more]
XP_022134921.1	2.8e-77	57.19	F-box protein PP2-B10-like isoform X1 [Momordica charantia]	[more]
XP_022134922.1	2.8e-77	57.19	F-box protein PP2-B10-like isoform X2 [Momordica charantia]	[more]
XP_008453629.1	1.0e-74	54.58	PREDICTED: F-box protein PP2-B10-like isoform X1 [Cucumis melo] >XP_016901363.1 ...	[more]

BLAST of CsaV3_1G031360 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02340.1	6.7e-41	35.84	phloem protein 2-B8	[more]
AT2G02360.1	6.7e-41	36.40	phloem protein 2-B10	[more]
AT2G02240.1	3.3e-40	36.03	F-box family protein	[more]
AT2G02230.1	2.8e-39	34.75	phloem protein 2-B1	[more]
AT5G24560.1	3.8e-36	35.66	phloem protein 2-B12	[more]

BLAST of CsaV3_1G031360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZVQ6\|P2B10_ARATH	1.2e-39	36.40	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
sp\|Q9ZVQ8\|PP2B8_ARATH	1.2e-39	35.84	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
sp\|Q9FV02\|SKIP3_ARATH	2.7e-39	37.27	F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2	[more]
sp\|Q3E6P4\|FB95_ARATH	6.0e-39	36.03	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
sp\|Q6NPT8\|PP2B1_ARATH	5.1e-38	34.75	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]

BLAST of CsaV3_1G031360 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LZQ3\|A0A0A0LZQ3_CUCSA	5.7e-143	90.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421910 PE=4 SV=1	[more]
tr\|A0A1S4DZG4\|A0A1S4DZG4_CUCME	6.6e-75	54.58	F-box protein PP2-B10-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494286 PE...	[more]
tr\|A0A0A0LU29\|A0A0A0LU29_CUCSA	1.8e-72	54.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421900 PE=4 SV=1	[more]
tr\|A0A1S3BWT7\|A0A1S3BWT7_CUCME	4.0e-72	53.71	F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494288 PE=4 SV=1	[more]
tr\|A0A0A0LWS1\|A0A0A0LWS1_CUCSA	1.9e-69	53.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421890 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR025886	PP2-like
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G031360.1	CsaV3_1G031360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 4..48 e-value: 1.8E-6 score: 27.6
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..47 score: 9.683
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 124..250 e-value: 1.8E-19 score: 70.2
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 3..79 e-value: 2.9E-6 score: 29.1
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 124..253
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 3..125
None	No IPR available	PANTHER	PTHR32278:SF6	F-BOX PROTEIN PP2-B1-RELATED	coord: 124..253
None	No IPR available	PANTHER	PTHR32278:SF6	F-BOX PROTEIN PP2-B1-RELATED	coord: 3..125
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 4..100

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G031360	Silver-seed gourd	carcucB0626
CsaV3_1G031360	Silver-seed gourd	carcucB0826
CsaV3_1G031360	Cucumber (Gy14) v2	cgybcucB001
CsaV3_1G031360	Cucumber (Gy14) v2	cgybcucB063
CsaV3_1G031360	Cucumber (Gy14) v1	cgycucB093
CsaV3_1G031360	Cucumber (Gy14) v1	cgycucB098
CsaV3_1G031360	Cucurbita maxima (Rimu)	cmacucB0068
CsaV3_1G031360	Cucurbita maxima (Rimu)	cmacucB0113
CsaV3_1G031360	Cucurbita moschata (Rifu)	cmocucB0055
CsaV3_1G031360	Cucurbita moschata (Rifu)	cmocucB0101
CsaV3_1G031360	Cucurbita pepo (Zucchini)	cpecucB0430
CsaV3_1G031360	Cucurbita pepo (Zucchini)	cpecucB0797
CsaV3_1G031360	Wild cucumber (PI 183967)	cpicucB000
CsaV3_1G031360	Wild cucumber (PI 183967)	cpicucB077
CsaV3_1G031360	Bottle gourd (USVL1VR-Ls)	cuclsiB007
CsaV3_1G031360	Bottle gourd (USVL1VR-Ls)	cuclsiB013
CsaV3_1G031360	Bottle gourd (USVL1VR-Ls)	cuclsiB076
CsaV3_1G031360	Melon (DHL92) v3.5.1	cucmeB043
CsaV3_1G031360	Melon (DHL92) v3.6.1	cucmedB040
CsaV3_1G031360	Watermelon (Charleston Gray)	cucwcgB075
CsaV3_1G031360	Watermelon (97103) v1	cucwmB085
CsaV3_1G031360	Watermelon (97103) v1	cucwmB092
CsaV3_1G031360	Watermelon (97103) v2	cucwmbB021
CsaV3_1G031360	Watermelon (97103) v2	cucwmbB064
CsaV3_1G031360	Wax gourd	cucwgoB004
CsaV3_1G031360	Wax gourd	cucwgoB106
CsaV3_1G031360	Cucumber (Chinese Long) v3	cuccucB014