CsaV3_1G031280 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G031280
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionpathogenesis-related protein PR-1
Locationchr1 : 18484053 .. 18485258 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAATTCTGAAGAGTCTCAATAATGTTAATATGTTGTTGAATAAATAATAACATTACATGAATTAGGAAAAAAAATGATTCATGACCAATAGTATATAATTAATGTAATAGCAAAAAAGAAAAAAGAAAAAAGAAAGTGGTAATCATTATCGAACATGGGTGCCACCCCATAGTTGACACACAAATTCCCTTTATCCAACTACTCACCTCCAAAACACACCATTCCTTTATATATATCATCCTCTCTCCAAAAATAATTCCCCATTCAAATTCAGCTCCAAAGAGCTCAATTTGAAGGAGGAGAAAAATAAACAAATAATCAAAATGCATGCATATTTTCTCATTATTCCCATCCCCATTCTCCTCCTCCTAACCTCCACTCCCTACGCCGCCGCAGCTCCCTCCATCAGGTCTGACAGAATTCTACAAAAGCAATTCCTTGCCCCTCACAATGCTGCCCGATATGCCCTCCGTTTGTCCCCCTTAGTTTGGGACCCCAAACTGGCTCGCTACGCTCAATCCTACGCCAACAAGCGCCGCGGGGATTGCGCCCTCCGCCATTCTGGGGGTCCTTATGGCGAAAACATCTTCTGGGGTAGCGGCAAGGACTGGACTCCGGCTCAAGCCGTGGCCGATTGGGTGTCCGAGCGCAAATGGTACAGTTATTGGGCAAACTCTTGCGTTGAGGGTGAACTATGTGGTCATTATACTCAAATTGTGTGGCGGTCCACTCGCCGGATTGGATGTGCTAGAGTCACTTGTAATGACGGTAAAGGCGTTTTTATCACTTGCAATTATGATCCTCCGGGTAATTACATTGGGATGAGACCTTATTAAAATTACTCTCTCTCTATATATATATACATATATAAGTAAAAAGGCATTAATTATTGTAGGTATTTTTAAAGGGTTAATTAAATTTGGAGTTTGTATATTATATATTTTGTGGAGTGAAATGGAAGAAGAAAAGAAATTGTTTGTAAAAGTTGTGTTGTTTCATGTCTTTGTCATATTTTCACATGTAATTGATTGATTTTATGTGCTGTATCCCTAATATTTATTATTGTTTTTTTCTTTCTTTTTGGTACTGTCCTATTCAAGGAGTGGTGTATATTTCCATACCCCTCCAAATAAATTTTACATTATTAAATGTATACACCTTTTTGTTTATGGATTCAAATGCTTCTCTTGGAGATTTTTTCTTTC

mRNA sequence

ATGCATGCATATTTTCTCATTATTCCCATCCCCATTCTCCTCCTCCTAACCTCCACTCCCTACGCCGCCGCAGCTCCCTCCATCAGGTCTGACAGAATTCTACAAAAGCAATTCCTTGCCCCTCACAATGCTGCCCGATATGCCCTCCGTTTGTCCCCCTTAGTTTGGGACCCCAAACTGGCTCGCTACGCTCAATCCTACGCCAACAAGCGCCGCGGGGATTGCGCCCTCCGCCATTCTGGGGGTCCTTATGGCGAAAACATCTTCTGGGGTAGCGGCAAGGACTGGACTCCGGCTCAAGCCGTGGCCGATTGGGTGTCCGAGCGCAAATGGTACAGTTATTGGGCAAACTCTTGCGTTGAGGGTGAACTATGTGGTCATTATACTCAAATTGTGTGGCGGTCCACTCGCCGGATTGGATGTGCTAGAGTCACTTGTAATGACGGTAAAGGCGTTTTTATCACTTGCAATTATGATCCTCCGGGTAATTACATTGGGATGAGACCTTATTAA

Coding sequence (CDS)

ATGCATGCATATTTTCTCATTATTCCCATCCCCATTCTCCTCCTCCTAACCTCCACTCCCTACGCCGCCGCAGCTCCCTCCATCAGGTCTGACAGAATTCTACAAAAGCAATTCCTTGCCCCTCACAATGCTGCCCGATATGCCCTCCGTTTGTCCCCCTTAGTTTGGGACCCCAAACTGGCTCGCTACGCTCAATCCTACGCCAACAAGCGCCGCGGGGATTGCGCCCTCCGCCATTCTGGGGGTCCTTATGGCGAAAACATCTTCTGGGGTAGCGGCAAGGACTGGACTCCGGCTCAAGCCGTGGCCGATTGGGTGTCCGAGCGCAAATGGTACAGTTATTGGGCAAACTCTTGCGTTGAGGGTGAACTATGTGGTCATTATACTCAAATTGTGTGGCGGTCCACTCGCCGGATTGGATGTGCTAGAGTCACTTGTAATGACGGTAAAGGCGTTTTTATCACTTGCAATTATGATCCTCCGGGTAATTACATTGGGATGAGACCTTATTAA

Protein sequence

MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY
Homology
[Close]
BLAST of CsaV3_1G031280 vs. NCBI nr
Match: XP_004146301.1 (PREDICTED: pathogenesis-related protein PR-1-like [Cucumis sativus] >KGN65424.1 hypothetical protein Csa_1G420610 [Cucumis sativus])

HSP 1 Score: 369.8 bits (948), Expect = 5.1e-99
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 1   MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL 60
           MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL
Sbjct: 1   MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL 60

Query: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV 120
           ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV
Sbjct: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV 120

Query: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY
Sbjct: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 170

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BLAST of CsaV3_1G031280 vs. NCBI nr
Match: XP_008453637.1 (PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo])

HSP 1 Score: 327.0 bits (837), Expect = 3.8e-86
Identity = 158/172 (91.86%), Postives = 160/172 (93.02%), Query Frame = 0 

Query: 1   MHAYFL-IIPI-PILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDP 60
           MHA+FL IIPI  ILLLLTST   AAA S RSDRILQKQFL PHNAARYALRLSPLVWD 
Sbjct: 1   MHAHFLIIIPIATILLLLTSTGCTAAARS-RSDRILQKQFLGPHNAARYALRLSPLVWDS 60

Query: 61  KLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANS 120
           KLARYAQ YANKRRGDCALRHSGGPYGENIFWGSG +WTPAQAVADWVSERKWYSYWANS
Sbjct: 61  KLARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNEWTPAQAVADWVSERKWYSYWANS 120

Query: 121 CVEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           CVEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY
Sbjct: 121 CVEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171

[Close]
BLAST of CsaV3_1G031280 vs. NCBI nr
Match: XP_022988522.1 (pathogenesis-related protein PR-1-like [Cucurbita maxima])

HSP 1 Score: 318.5 bits (815), Expect = 1.3e-83
Identity = 147/170 (86.47%), Postives = 154/170 (90.59%), Query Frame = 0 

Query: 1   MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL 60
           MHAY L+IPI I+L L S+   AAA  +RSDR+LQKQFL PHNAARYALRL+PLVWD KL
Sbjct: 1   MHAY-LLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKL 60

Query: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV 120
           ARYAQ YANKRRGDCALRHSGGPYGENIFWGSG  W PAQAV+DWVSERKWYSYWANSCV
Sbjct: 61  ARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCV 120

Query: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIG RPY
Sbjct: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]
BLAST of CsaV3_1G031280 vs. NCBI nr
Match: XP_023516778.1 (pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.8 bits (808), Expect = 8.7e-83
Identity = 146/170 (85.88%), Postives = 154/170 (90.59%), Query Frame = 0 

Query: 1   MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL 60
           MHAY L+IPI I+L L S+   AAA S+RSDR+LQKQFL PHNAARYALRL+PLVWD KL
Sbjct: 1   MHAY-LLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKL 60

Query: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV 120
           ARYAQ YANKRRGDCALRHSGGPYGENIFWGSG  W PAQAV+DWVSERKWYSYWANSCV
Sbjct: 61  ARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCV 120

Query: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           EGELCGHYTQIVWR+TRRIGCARVTC DGKGVFITCNYDPPGNYIG RPY
Sbjct: 121 EGELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169

[Close]
BLAST of CsaV3_1G031280 vs. NCBI nr
Match: XP_022921796.1 (pathogenesis-related protein PR-1-like [Cucurbita moschata])

HSP 1 Score: 313.9 bits (803), Expect = 3.3e-82
Identity = 146/170 (85.88%), Postives = 153/170 (90.00%), Query Frame = 0 

Query: 1   MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL 60
           MHAY L+IPI I+L L S+   AAA  +RSDR+LQKQFL PHNAARYALRL+PLVWD KL
Sbjct: 1   MHAY-LLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKL 60

Query: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV 120
           ARYAQ YANKRRGDCALRHSGGPYGENIFWGSG  W PAQAV+DWVSERKWYSYWANSCV
Sbjct: 61  ARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCV 120

Query: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           EGEL GHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIG RPY
Sbjct: 121 EGELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]
BLAST of CsaV3_1G031280 vs. TAIR10
Match: AT4G30320.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 212.6 bits (540), Expect = 1.9e-55
Identity = 90/136 (66.18%), Postives = 109/136 (80.15%), Query Frame = 0 

Query: 35  QKQFLAPHNAARYALRLSPLVWDPKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGK 94
           Q+QF+ P NAAR  LRL PL WD KLARYAQ +AN+RRGDCAL HS GPYGEN+FWGSG 
Sbjct: 27  QEQFMGPQNAARAHLRLKPLKWDAKLARYAQWWANQRRGDCALTHSNGPYGENLFWGSGN 86

Query: 95  DWTPAQAVADWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFI 154
            W P+QA   W+SE + Y+Y +NSC   E+CGHYTQIVW++T++IGCA V CN G GVF+
Sbjct: 87  RWGPSQAAYGWLSEARSYNYRSNSC-NSEMCGHYTQIVWKNTQKIGCAHVICNGGGGVFL 146

Query: 155 TCNYDPPGNYIGMRPY 171
           TCNYDPPGN++G +PY
Sbjct: 147 TCNYDPPGNFLGRKPY 161

[Close]
BLAST of CsaV3_1G031280 vs. TAIR10
Match: AT4G25790.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 1.6e-51
Identity = 85/136 (62.50%), Postives = 101/136 (74.26%), Query Frame = 0 

Query: 35  QKQFLAPHNAARYALRLSPLVWDPKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGK 94
           ++QFL PHN  R  L L PLVWD K+A YA  +AN+RR DC+L HS GPYGEN+FWGSG 
Sbjct: 75  EQQFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQRRYDCSLTHSTGPYGENLFWGSGS 134

Query: 95  DWTPAQAVADWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFI 154
           D+T   AV  W  E K Y++  N+C    +CGHYTQIVWR TRR+GCARV C +G GVFI
Sbjct: 135 DFTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGCARVVCENGAGVFI 194

Query: 155 TCNYDPPGNYIGMRPY 171
           TCNYDPPGNY+G +PY
Sbjct: 195 TCNYDPPGNYVGEKPY 210

[Close]
BLAST of CsaV3_1G031280 vs. TAIR10
Match: AT5G57625.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 198.4 bits (503), Expect = 3.7e-51
Identity = 83/137 (60.58%), Postives = 101/137 (73.72%), Query Frame = 0 

Query: 34  LQKQFLAPHNAARYALRLSPLVWDPKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSG 93
           + + FL PHNA R  L L PL+WD KLA YA  +AN+RR DC+L HS GPYGEN+FWGSG
Sbjct: 71  IARLFLDPHNALRSGLGLPPLIWDGKLASYATWWANQRRYDCSLTHSTGPYGENLFWGSG 130

Query: 94  KDWTPAQAVADWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVF 153
             W P  AV  W+ E + Y++  NSC    +CGHYTQ+VWR T+R+GCARV C +G GVF
Sbjct: 131 SSWAPGFAVQSWIVEGRSYNHNTNSCDGSGMCGHYTQMVWRDTKRLGCARVVCENGAGVF 190

Query: 154 ITCNYDPPGNYIGMRPY 171
           ITCNYDPPGNY+G +PY
Sbjct: 191 ITCNYDPPGNYVGEKPY 207

[Close]
BLAST of CsaV3_1G031280 vs. TAIR10
Match: AT4G25780.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 193.4 bits (490), Expect = 1.2e-49
Identity = 84/138 (60.87%), Postives = 106/138 (76.81%), Query Frame = 0 

Query: 37  QFLAPHNAARYALRLSPLVWDPKLARYAQSYANKRRGDCALRH--SGGPY--GENIFWGS 96
           QFL  HN  R A    PL+WD +L  YAQ +AN+RRGDCALRH  S G +  GENI+WG 
Sbjct: 54  QFLFRHNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRHSVSNGEFNLGENIYWGY 113

Query: 97  GKDWTPAQAVADWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVTCNDGKGV 156
           G +W+PA AV  W SE+++Y Y +N+C  G++CGHYTQIVW+STRR+GCARV C++G G+
Sbjct: 114 GANWSPADAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVGCARVVCDNG-GI 173

Query: 157 FITCNYDPPGNYIGMRPY 171
           F+TCNYDPPGNYIG +PY
Sbjct: 174 FMTCNYDPPGNYIGQKPY 190

[Close]
BLAST of CsaV3_1G031280 vs. TAIR10
Match: AT4G31470.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 173.3 bits (438), Expect = 1.3e-43
Identity = 85/177 (48.02%), Postives = 103/177 (58.19%), Query Frame = 0 

Query: 12  ILLLLTSTPYAAAAPSIRSDR------------------ILQKQFLAPHNAARYALRLSP 71
           I++++ STP  + +  I S+R                   +Q+QFL PHN  R  LRL P
Sbjct: 10  IIIIVISTPLPSLSFQIPSNRTPTTSTLIFSQDKALARNTIQQQFLRPHNILRAKLRLPP 69

Query: 72  LVWDPKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYS 131
           L W   LA YA  +A  RRGDC L HSGGPYGEN+FWGSGK WTP  AVA W SE K+Y 
Sbjct: 70  LKWSNSLALYASRWARTRRGDCKLIHSGGPYGENLFWGSGKGWTPRDAVAAWASEMKYYD 129

Query: 132 YWANSCVEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
              + C     C HYTQ+VW+ + RIGCA   C  G   FI CNYDPPGN +G  P+
Sbjct: 130 RRTSHCKANGDCLHYTQLVWKKSSRIGCAISFCKTG-DTFIICNYDPPGNIVGQPPF 185

[Close]
BLAST of CsaV3_1G031280 vs. Swiss-Prot
Match: sp|Q40374|PR1_MEDTR (Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 7.8e-59
Identity = 102/162 (62.96%), Postives = 122/162 (75.31%), Query Frame = 0 

Query: 13  LLLLTSTPYAAAA--PSIRS--DRILQKQFLAPHNAARYALRLSPLVWDPKLARYAQSYA 72
           LLLLT   + +A+  P+ +S   R  + QFL P N AR A+ L PLVWD KL  YAQ YA
Sbjct: 12  LLLLTFISHVSASYIPNKKSFKSRSFKNQFLIPQNIARAAVGLRPLVWDDKLTHYAQWYA 71

Query: 73  NKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCVEGELCGHY 132
           N+RR DCAL HS GPYGENIFWGSG  W PAQAV+ WV E+++Y+YW NSCV+GE+CGHY
Sbjct: 72  NQRRNDCALEHSNGPYGENIFWGSGVGWNPAQAVSAWVDEKQFYNYWHNSCVDGEMCGHY 131

Query: 133 TQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           TQ+VW ST ++GCA V C+D KG F+TCNYDPPGNY G RPY
Sbjct: 132 TQVVWGSTTKVGCASVVCSDDKGTFMTCNYDPPGNYYGERPY 173

[Close]
BLAST of CsaV3_1G031280 vs. Swiss-Prot
Match: sp|P35792|PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-49
Identity = 85/161 (52.80%), Postives = 116/161 (72.05%), Query Frame = 0 

Query: 11  PILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKLARYAQSYANK 70
           P L +L +   AAA  ++   +   + +++PHNAAR A+ +  + W  KL  +AQ+YAN+
Sbjct: 4   PKLAILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQ 63

Query: 71  RRGDCALRHSGGPYGENIFWGS-GKDWTPAQAVADWVSERKWYSYWANSCVEGELCGHYT 130
           R  DC L+HSGGPYGENIFWGS G DW  A AV  WV+E+K Y+Y +N+C  G++CGHYT
Sbjct: 64  RINDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYT 123

Query: 131 QIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           Q+VWR++  IGCARV CN+ +GVFITCNY+P GN +G +PY
Sbjct: 124 QVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]
BLAST of CsaV3_1G031280 vs. Swiss-Prot
Match: sp|Q05968|PR1_HORVU (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-49
Identity = 86/161 (53.42%), Postives = 115/161 (71.43%), Query Frame = 0 

Query: 11  PILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKLARYAQSYANK 70
           P L +L +   AAA  ++   +   + +++PHNAAR A+ +  + W  KL  +AQ+YAN+
Sbjct: 4   PKLAILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQ 63

Query: 71  RRGDCALRHSGGPYGENIFWGS-GKDWTPAQAVADWVSERKWYSYWANSCVEGELCGHYT 130
           R  DC L+HSGGPYGENIFWGS G DW  + AV  WVSE+K Y Y +N+C  G++CGHYT
Sbjct: 64  RINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYT 123

Query: 131 QIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           Q+VWR++  IGCARV CN+ +GVFITCNY+P GN IG +PY
Sbjct: 124 QVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIIGQKPY 164

[Close]
BLAST of CsaV3_1G031280 vs. Swiss-Prot
Match: sp|P35793|PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.3e-49
Identity = 84/161 (52.17%), Postives = 116/161 (72.05%), Query Frame = 0 

Query: 11  PILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKLARYAQSYANK 70
           P L++L +   +AA  ++   +   + +++PHNAAR A+ +  + W  KL  +AQ+YAN+
Sbjct: 4   PKLVILLALAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQ 63

Query: 71  RRGDCALRHSGGPYGENIFWGS-GKDWTPAQAVADWVSERKWYSYWANSCVEGELCGHYT 130
           R  DC L+HSGGPYGENIFWGS G DW  + AV  WVSE+K Y Y +N+C  G++CGHYT
Sbjct: 64  RINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYT 123

Query: 131 QIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           Q+VWR++  IGCARV CN+ +GVFITCNY+P GN +G +PY
Sbjct: 124 QVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]
BLAST of CsaV3_1G031280 vs. Swiss-Prot
Match: sp|Q00008|PRMS_MAIZE (Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-48
Identity = 85/160 (53.12%), Postives = 108/160 (67.50%), Query Frame = 0 

Query: 12  ILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKLARYAQSYANKR 71
           +LL L      A  PS   +    + +L P N+AR A+ + P+ W  KL ++A+ YA +R
Sbjct: 10  LLLWLVMAAATAVHPSYSENS--PQDYLTPQNSARAAVGVGPVTWSTKLQQFAEKYAAQR 69

Query: 72  RGDCALRHSGGPYGENIFWGS-GKDWTPAQAVADWVSERKWYSYWANSCVEGELCGHYTQ 131
            GDC L+HSGGPYGENIFWGS G DW    AV  WV E++WY+Y  NSC  G++CGHYTQ
Sbjct: 70  AGDCRLQHSGGPYGENIFWGSAGFDWKAVDAVRSWVDEKQWYNYATNSCAAGKVCGHYTQ 129

Query: 132 IVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           +VWR+T  IGCARV C D +GVFI CNY+P GN  GM+PY
Sbjct: 130 VVWRATTSIGCARVVCRDNRGVFIICNYEPRGNIAGMKPY 167

[Close]
BLAST of CsaV3_1G031280 vs. TrEMBL
Match: tr|A0A0A0LWR4|A0A0A0LWR4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G420610 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 3.4e-99
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 1   MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL 60
           MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL
Sbjct: 1   MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL 60

Query: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV 120
           ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV
Sbjct: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV 120

Query: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY
Sbjct: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 170

[Close]
BLAST of CsaV3_1G031280 vs. TrEMBL
Match: tr|A0A1S3BWR0|A0A1S3BWR0_CUCME (pathogenesis-related protein PR-1 OS=Cucumis melo OX=3656 GN=LOC103494292 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.5e-86
Identity = 158/172 (91.86%), Postives = 160/172 (93.02%), Query Frame = 0 

Query: 1   MHAYFL-IIPI-PILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDP 60
           MHA+FL IIPI  ILLLLTST   AAA S RSDRILQKQFL PHNAARYALRLSPLVWD 
Sbjct: 1   MHAHFLIIIPIATILLLLTSTGCTAAARS-RSDRILQKQFLGPHNAARYALRLSPLVWDS 60

Query: 61  KLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANS 120
           KLARYAQ YANKRRGDCALRHSGGPYGENIFWGSG +WTPAQAVADWVSERKWYSYWANS
Sbjct: 61  KLARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNEWTPAQAVADWVSERKWYSYWANS 120

Query: 121 CVEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           CVEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY
Sbjct: 121 CVEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171

[Close]
BLAST of CsaV3_1G031280 vs. TrEMBL
Match: tr|A0A2P6QTL3|A0A2P6QTL3_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0403501 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.5e-64
Identity = 116/163 (71.17%), Postives = 130/163 (79.75%), Query Frame = 0 

Query: 10  IPILLLLTSTPYAAAAPSIRSDRILQ--KQFLAPHNAARYALRLSPLVWDPKLARYAQSY 69
           I I LLL ST Y  +APS ++ + L    +FLAP NAAR A+R+ PLVWD KLARYAQ Y
Sbjct: 17  ITISLLLISTTYTYSAPSKQTQQYLSLAYKFLAPQNAARSAVRMRPLVWDAKLARYAQWY 76

Query: 70  ANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCVEGELCGH 129
            N+RR DCALRHS GPYGENIFWGSGK WTPAQAV  WVSERKWYSYW+NSC  G+ CGH
Sbjct: 77  GNQRRYDCALRHSNGPYGENIFWGSGKGWTPAQAVTAWVSERKWYSYWSNSCARGQECGH 136

Query: 130 YTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           YTQIVWRST R+GCARV C  G+GVF+ C+YDPPGNYIG RPY
Sbjct: 137 YTQIVWRSTGRVGCARVDCFGGRGVFMVCSYDPPGNYIGERPY 179

[Close]
BLAST of CsaV3_1G031280 vs. TrEMBL
Match: tr|A0A2N9HDL4|A0A2N9HDL4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37887 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.9e-63
Identity = 114/161 (70.81%), Postives = 126/161 (78.26%), Query Frame = 0 

Query: 10  IPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKLARYAQSYAN 69
           + I L L ST +A    S R    L  QFLAPHNAAR ALRL PLVWD KL RYAQ YAN
Sbjct: 8   LTIFLFLISTTHAFTKQSQRLS--LATQFLAPHNAARSALRLRPLVWDAKLTRYAQWYAN 67

Query: 70  KRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCVEGELCGHYT 129
           +RR DCAL HS GPYGENIFWGSG  WT +QAV  W+SER+WY+YW+NSC  GE CGHYT
Sbjct: 68  QRRFDCALEHSNGPYGENIFWGSGDGWTASQAVTAWISERQWYNYWSNSCAGGEECGHYT 127

Query: 130 QIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
           QIVW STRR+GCARVTC +G+GVF+TCNYDPPGNYIG RPY
Sbjct: 128 QIVWSSTRRVGCARVTCYEGRGVFMTCNYDPPGNYIGERPY 166

[Close]
BLAST of CsaV3_1G031280 vs. TrEMBL
Match: tr|A0A2C9VPR1|A0A2C9VPR1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G027000 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 8.6e-63
Identity = 114/170 (67.06%), Postives = 130/170 (76.47%), Query Frame = 0 

Query: 1   MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL 60
           MH  ++ +PI +L LL+ T  AAA  S  S      QFLAP NAAR  LR+ PLVWD KL
Sbjct: 1   MHTCYISLPILLLFLLSWTHQAAAHLSAAS------QFLAPQNAARATLRMPPLVWDSKL 60

Query: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV 120
           ARYAQ YAN+RR DC LRHS GPYGENIFWGSG  W+PAQAV  WVSERKWY YW+NSC 
Sbjct: 61  ARYAQWYANQRRYDCDLRHSNGPYGENIFWGSGSGWSPAQAVTAWVSERKWYDYWSNSCA 120

Query: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171
             + CGHYTQ+VWR TRR+GCA+V C+ GKGVF+TCNYDPPGN+IG RPY
Sbjct: 121 GDQECGHYTQVVWRKTRRVGCAKVNCSGGKGVFMTCNYDPPGNFIGERPY 164

The following BLAST results are available for this feature:
BLAST of CsaV3_1G031280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146301.15.1e-99100.00PREDICTED: pathogenesis-related protein PR-1-like [Cucumis sativus] >KGN65424.1 ... [more]
XP_008453637.13.8e-8691.86PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo][more]
XP_022988522.11.3e-8386.47pathogenesis-related protein PR-1-like [Cucurbita maxima][more]
XP_023516778.18.7e-8385.88pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo][more]
XP_022921796.13.3e-8285.88pathogenesis-related protein PR-1-like [Cucurbita moschata][more]
BLAST of CsaV3_1G031280 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G30320.11.9e-5566.18CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT4G25790.11.6e-5162.50CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT5G57625.13.7e-5160.58CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT4G25780.11.2e-4960.87CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT4G31470.11.3e-4348.02CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
BLAST of CsaV3_1G031280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q40374|PR1_MEDTR7.8e-5962.96Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV... [more]
sp|P35792|PR12_HORVU2.5e-4952.80Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
sp|Q05968|PR1_HORVU2.5e-4953.42Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
sp|P35793|PR13_HORVU4.3e-4952.17Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
sp|Q00008|PRMS_MAIZE1.2e-4853.13Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1[more]
BLAST of CsaV3_1G031280 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LWR4|A0A0A0LWR4_CUCSA3.4e-99100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G420610 PE=3 SV=1[more]
tr|A0A1S3BWR0|A0A1S3BWR0_CUCME2.5e-8691.86pathogenesis-related protein PR-1 OS=Cucumis melo OX=3656 GN=LOC103494292 PE=3 S... [more]
tr|A0A2P6QTL3|A0A2P6QTL3_ROSCH3.5e-6471.17Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0403501 PE=3... [more]
tr|A0A2N9HDL4|A0A2N9HDL4_FAGSY3.9e-6370.81Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37887 PE=3 SV=1[more]
tr|A0A2C9VPR1|A0A2C9VPR1_MANES8.6e-6367.06Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G027000 PE=3 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: INTERPRO
TermDefinition
IPR034111SCP_PR1-like
IPR018244Allrgn_V5/Tpx1_CS
IPR035940CAP_sf
IPR014044CAP_domain
IPR001283Allrgn_V5/Tpx1
IPR002413V5_allergen
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G031280.1CsaV3_1G031280.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 99..114
score: 26.95
coord: 54..72
score: 47.04
coord: 124..143
score: 55.31
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 125..141
score: 61.98
coord: 54..72
score: 42.38
coord: 101..114
score: 37.14
coord: 153..166
score: 55.56
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 8..170
IPR014044CAP domainSMARTSM00198SCP_3coord: 35..166
e-value: 9.7E-59
score: 211.1
IPR014044CAP domainPFAMPF00188CAPcoord: 39..158
e-value: 1.5E-24
score: 87.1
IPR035940CAP superfamilyGENE3DG3DSA:3.40.33.10coord: 33..170
e-value: 5.7E-44
score: 151.7
IPR035940CAP superfamilySUPERFAMILYSSF55797PR-1-likecoord: 31..170
NoneNo IPR availablePANTHERPTHR10334:SF319CAP CYSTEINE-RICH SECRETORY PROTEINS, ANTIGEN 5, AND PATHOGENESIS-RELATED 1 PROTEIN SUPERFAMILY PROTEINcoord: 8..170
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 126..136
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 153..164
IPR034111Pathogenesis-related protein 1-like, SCP domainCDDcd05381SCP_PR-1_likecoord: 35..170
e-value: 3.61335E-85
score: 248.317

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G031280Cucumber (Chinese Long) v3cuccucB014
CsaV3_1G031280Silver-seed gourdcarcucB0826
CsaV3_1G031280Cucumber (Gy14) v2cgybcucB001
CsaV3_1G031280Cucumber (Gy14) v2cgybcucB063
CsaV3_1G031280Cucumber (Gy14) v1cgycucB093
CsaV3_1G031280Cucumber (Gy14) v1cgycucB098
CsaV3_1G031280Cucurbita maxima (Rimu)cmacucB0068
CsaV3_1G031280Cucurbita maxima (Rimu)cmacucB0113
CsaV3_1G031280Cucurbita moschata (Rifu)cmocucB0055
CsaV3_1G031280Cucurbita moschata (Rifu)cmocucB0101
CsaV3_1G031280Cucurbita pepo (Zucchini)cpecucB0430
CsaV3_1G031280Cucurbita pepo (Zucchini)cpecucB0797
CsaV3_1G031280Wild cucumber (PI 183967)cpicucB000
CsaV3_1G031280Wild cucumber (PI 183967)cpicucB077
CsaV3_1G031280Bottle gourd (USVL1VR-Ls)cuclsiB013
CsaV3_1G031280Bottle gourd (USVL1VR-Ls)cuclsiB076
CsaV3_1G031280Melon (DHL92) v3.5.1cucmeB043
CsaV3_1G031280Melon (DHL92) v3.6.1cucmedB040
CsaV3_1G031280Watermelon (Charleston Gray)cucwcgB075
CsaV3_1G031280Watermelon (97103) v1cucwmB085
CsaV3_1G031280Watermelon (97103) v1cucwmB092
CsaV3_1G031280Watermelon (97103) v2cucwmbB064
CsaV3_1G031280Wax gourdcucwgoB004
CsaV3_1G031280Wax gourdcucwgoB106