CsaV3_1G030830 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGACAACCATTCAAATAATATTGTATATATTTGGGAATAATTATAGTTGTGTTTACTTTCCAACAACCGCCCCTGCTTTGTTGAGTGTAAAATAATGCCTATAAAAGAAAGACAGAAACACCACATCCTCATTTGTTAATAGTGGAGTAGTAGTTGTTGGGTGTGGTGTTTGATCATCATCAGTAATAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAATGGTTGTTAATAATAACAATAATAATGGGTCGTTGTTGTCAAGGGGTTTAAACGCAAAGATTATGGGTTCAGGGAAAGAAGCGATGGTTCTGGGTCATGGGTTTGGAGGCAACCAGTCATTGTGGGACAAAATAGTACCAAAGCTGAGTCAGGTGTATACAGTGGTTGTGTTTGATTGGAGCTTTTCAGGTTCAATTAAGGATCCTAATTTTATGTTTGATCCTAAAAAATACTCATCTTATTCTGCTTTTGCTGAAGATCTAATAGCTCTGATTGATGAACTTGGCCTTACTTCAACTATTTTCCTTGGTCACTCCATGTCTGGCCTTATTGGCTGCCTTGCTTACACCAAAAGACCTGACCTTTTTCAAACTCTCATTCTTCTTTGTTCTTCTCCAAGGTAAGTTCTCTTTGTCTTTTTTCTTTGAGGTCAATATATATGTTGATTGGATATTTTGATCGATTCTAACATCTTTTAGTTGGGCGGAGTTTCAGTTTGTAAATAACTATTTGAGTTGTTATGTTTAATATAATTGAAATTTAAACATGGATTAGATGTAGCTGAGATGTAGGTCTCTTCTTTAATTTAAGTGACATAATTATATTAATATATATAGCCTATCTTGTTAGTATAATTAAGGGGTTTTGTGATCTTTTGATACCAACATGTAAAAAGTCTTGCTTTGATTTTTTCTTCAAAGGGAGGATTTGAAAAAGAGGAAAAATAAGAAAAGAAAGGTATTGGAAAGTGAAAATTTGTTTTTAGTATAAATGAAACGGACAGATTTGAACTATAAACCCGTCGATCTTCCTGACATAAACGAGATATTTAAAATTGTTTATATCGATCTTCATGGCATAAACGAGATATTTAAAATTTGTTTTTTTAGAAGGGAAATGATAGGTGGATAACATAGCTATTTATGTAACAGTGTATTGATTGGGTTTATCTGTTTTTTTAAGAAAAAAAAAAGGAAAGAAATGCTGTGGTACAGCTTTCATTATTTCATAAATATATATATATTTAATATCACCATTAAACATGGCTTCTCTTTTTAAAGCCATGAAAAGTATATTCCTATATTAGTTAAAGTCATTGTGGAGTGGTTTTTCCTCTCGGCATAAATATTTGTCATCGTATCTCTTTTAATATCATATTCTATTATTCAAAAAGGAGCTTAAGATTTGCTCTCAATTTAATAATATATATTAATTATCAATTAGCTTTTCTTCTTTATTACCTCTCTCATTATTCTTTCCTCTTATCCGGATGAAATTAAGTTCTGTTTGGATATTTCATGGGTTCTCTTTTAAAATCATTTCTAAAAACAAATATATACTTAACCCGTTTTAATTTTTTTTTTAATTTTTTGTTTTCAAAAACATAAAAACGAGAATGAATCACCCAACAAATCCTATCATTCCTTTTTCTTCTTTTTCATAAGATGACCAACGAAAAATCAAACCCGAATTAAGTGTGATTATGTGATATACTACTATTTGATTATGTGTTGTAAACAAGAGTCTAGCCAAATAGATAGTATTTTGTTGTATTTATAAATATTTTGAGCATTATTTAAAATAATTTCTTTTAATAATATATATTTTAAGTTGTGATCCACGTCATCATTTTGATTATTTATTTTCCTAGGGACTAATGGTGATAGGTTTCAGCATGACGAAGTCCTTTTCACCCATTAATAAATATTATGTTAATTTGTATAGTTGTTTATTATATGCAACTTTTGTCAAACAAATCTGAGCATAAAAATGTATAGAACATTGCGATGGTTTATTTAAAGTCCTTAATTCATTCCCCACCTTTTCAAATGTTGATCTAAACAAAAGACTTTTACTGAATAACAATTACAATTCTGGAAATGTTTGTCCTCCGATATTAAAAAACATGTATTTTAAAATTATACCTATTTAGTCATAAATTTAGAAACGTAGACTCCTTTGGTTTTTGAATTTTCAAGAGTACATATTATACAAAACTTCTAAAAATATTTTTGGATGATCGTCACCTTTAAATGACTAGAGCCTATTAATACACTAATTTTCCCTACAAGCTTCTATATTATGTGAGCAATGGTTTCAGAAACAATTAACTGAAAATAAAAAATGTTATCAAAAGGAGGCCTAAGATATTAGGGTTAATCTCAAATTCTTTAGCTGTTATTTGTGTACAGATACAAAAAATAATATAAAATTTTCATTTATTATATTTTGTGATTCCCCCTATATTATTAGTGCTAATCAATTTGGTTTATGTCACTTAAACCATTGGTTCAGCTTACAGAAAATGCTTCAAAAAATTTCATCAGGTTTGGTTAATTGCAAAAGGTATTCTTAAAGTTACCAAAATAATTTTACTCTTAATTCCTTAACATATCAGTTTTAACATGATATCGAAGTCAAAAGCAAAAGATGTTGATGATCTGGTGTTCAAACTTGTACAATGTCATTTCCTCTTTGATTTATATTAATATTAACTTTAACTCATCAAATCTTCTAACAAAATCTCAACTCCATGTGAATGAGTATTGAAGTATTCATTAATGATGGATCATTGCTAACACAGACAATTGTGTTGTTAGGTATATAAATACAGAAGACTATGAAGGTGGTTTCAACAAATCAGACATCGATCAAATTGTAGCAAATATTGAATCCAACTATGAAAATTGGTCCACAAACTTTCCTTGTCTTGTTGTGGACGAATCCGATCCTCAGTCACTGAGTAGGTTTCAAAAATGCTTGAAAGAGATGAGGCCTGAAGTTGCAACACCCTTGGCCAGGACTGTGTTCAATGTAGATGAGAGAGAGATTCTCGAAAAAGTCGACATTCCATGCATCATCCTGCAAACAAAAAACGACATTGTCGTCCCTGCCTCAGTTCCCACTTTTATGCAGAAGAAAATCAAAGGAAGTTGCACAGTGAGAGTTATCAACACTAATGGACACTTCCCTCACTTGACTGCACATCATGAGTTGCTTCAAGTTCTTGGTGAAGTCTTGGGCTTTTGAAATGTAATAGATCTTAGTGAAATCTTGGGTTAGGAAGGAAGTGAATAATGTAAAAGTCAGTGTGGAATGTAGTGTGTTTATAGTTACTGGGGGAAGTTGATGAAATTAAGATTGTTTTGTGTAATGGGATTTGAGGTGTAATTTTGTTGAGGTGTTTTCATTTAATAGATGTACCAAAATTTAGTCTTCTTATTTTATTCTCTACAGCCAAGCAAGGTTAGGGCAGTCTGTTTGCTTCACAAATACATCTAATGAGCAAGAAAGTTCTTGGAAAACCATAAACAATATAGTATAAAACATCCAGATTTAATGTTTTATAAGATTGACCTGATTTCTCTCATCAAAATGC ATGGTTGTTAATAATAACAATAATAATGGGTCGTTGTTGTCAAGGGGTTTAAACGCAAAGATTATGGGTTCAGGGAAAGAAGCGATGGTTCTGGGTCATGGGTTTGGAGGCAACCAGTCATTGTGGGACAAAATAGTACCAAAGCTGAGTCAGGTGTATACAGTGGTTGTGTTTGATTGGAGCTTTTCAGGTTCAATTAAGGATCCTAATTTTATGTTTGATCCTAAAAAATACTCATCTTATTCTGCTTTTGCTGAAGATCTAATAGCTCTGATTGATGAACTTGGCCTTACTTCAACTATTTTCCTTGGTCACTCCATGTCTGGCCTTATTGGCTGCCTTGCTTACACCAAAAGACCTGACCTTTTTCAAACTCTCATTCTTCTTTGTTCTTCTCCAAGGTATATAAATACAGAAGACTATGAAGGTGGTTTCAACAAATCAGACATCGATCAAATTGTAGCAAATATTGAATCCAACTATGAAAATTGGTCCACAAACTTTCCTTGTCTTGTTGTGGACGAATCCGATCCTCAGTCACTGAGTAGGTTTCAAAAATGCTTGAAAGAGATGAGGCCTGAAGTTGCAACACCCTTGGCCAGGACTGTGTTCAATGTAGATGAGAGAGAGATTCTCGAAAAAGTCGACATTCCATGCATCATCCTGCAAACAAAAAACGACATTGTCGTCCCTGCCTCAGTTCCCACTTTTATGCAGAAGAAAATCAAAGGAAGTTGCACAGTGAGAGTTATCAACACTAATGGACACTTCCCTCACTTGACTGCACATCATGAGTTGCTTCAAGTTCTTGGTGAAGTCTTGGGCTTTTGA ATGGTTGTTAATAATAACAATAATAATGGGTCGTTGTTGTCAAGGGGTTTAAACGCAAAGATTATGGGTTCAGGGAAAGAAGCGATGGTTCTGGGTCATGGGTTTGGAGGCAACCAGTCATTGTGGGACAAAATAGTACCAAAGCTGAGTCAGGTGTATACAGTGGTTGTGTTTGATTGGAGCTTTTCAGGTTCAATTAAGGATCCTAATTTTATGTTTGATCCTAAAAAATACTCATCTTATTCTGCTTTTGCTGAAGATCTAATAGCTCTGATTGATGAACTTGGCCTTACTTCAACTATTTTCCTTGGTCACTCCATGTCTGGCCTTATTGGCTGCCTTGCTTACACCAAAAGACCTGACCTTTTTCAAACTCTCATTCTTCTTTGTTCTTCTCCAAGGTATATAAATACAGAAGACTATGAAGGTGGTTTCAACAAATCAGACATCGATCAAATTGTAGCAAATATTGAATCCAACTATGAAAATTGGTCCACAAACTTTCCTTGTCTTGTTGTGGACGAATCCGATCCTCAGTCACTGAGTAGGTTTCAAAAATGCTTGAAAGAGATGAGGCCTGAAGTTGCAACACCCTTGGCCAGGACTGTGTTCAATGTAGATGAGAGAGAGATTCTCGAAAAAGTCGACATTCCATGCATCATCCTGCAAACAAAAAACGACATTGTCGTCCCTGCCTCAGTTCCCACTTTTATGCAGAAGAAAATCAAAGGAAGTTGCACAGTGAGAGTTATCAACACTAATGGACACTTCCCTCACTTGACTGCACATCATGAGTTGCTTCAAGTTCTTGGTGAAGTCTTGGGCTTTTGA MVVNNNNNNGSLLSRGLNAKIMGSGKEAMVLGHGFGGNQSLWDKIVPKLSQVYTVVVFDWSFSGSIKDPNFMFDPKKYSSYSAFAEDLIALIDELGLTSTIFLGHSMSGLIGCLAYTKRPDLFQTLILLCSSPRYINTEDYEGGFNKSDIDQIVANIESNYENWSTNFPCLVVDESDPQSLSRFQKCLKEMRPEVATPLARTVFNVDEREILEKVDIPCIILQTKNDIVVPASVPTFMQKKIKGSCTVRVINTNGHFPHLTAHHELLQVLGEVLGF
BLAST of CsaV3_1G030830 vs. NCBI nr
Match: XP_004148713.1 (PREDICTED: probable strigolactone esterase DAD2 [Cucumis sativus] >XP_011656486.1 PREDICTED: probable strigolactone esterase DAD2 [Cucumis sativus] >KGN65375.1 hypothetical protein Csa_1G386590 [Cucumis sativus]) HSP 1 Score: 545.4 bits (1404), Expect = 1.1e-151 Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. NCBI nr
Match: XP_008463365.1 (PREDICTED: probable strigolactone esterase DAD2 [Cucumis melo]) HSP 1 Score: 530.0 bits (1364), Expect = 4.8e-147 Identity = 266/277 (96.03%), Postives = 272/277 (98.19%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. NCBI nr
Match: XP_022933803.1 (probable strigolactone esterase DAD2 [Cucurbita moschata]) HSP 1 Score: 433.7 bits (1114), Expect = 4.6e-118 Identity = 209/263 (79.47%), Postives = 234/263 (88.97%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. NCBI nr
Match: XP_023530785.1 (probable strigolactone esterase DAD2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 431.4 bits (1108), Expect = 2.3e-117 Identity = 207/263 (78.71%), Postives = 235/263 (89.35%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. NCBI nr
Match: XP_022987831.1 (probable strigolactone esterase DAD2 [Cucurbita maxima]) HSP 1 Score: 431.0 bits (1107), Expect = 3.0e-117 Identity = 210/264 (79.55%), Postives = 234/264 (88.64%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. TAIR10
Match: AT3G24420.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 309.3 bits (791), Expect = 2.4e-84 Identity = 154/277 (55.60%), Postives = 201/277 (72.56%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. TAIR10
Match: AT3G03990.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 209.5 bits (532), Expect = 2.6e-54 Identity = 100/258 (38.76%), Postives = 163/258 (63.18%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. TAIR10
Match: AT4G37470.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 204.1 bits (518), Expect = 1.1e-52 Identity = 100/254 (39.37%), Postives = 158/254 (62.20%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. Swiss-Prot
Match: sp|J9U5U9|DAD2_PETHY (Probable strigolactone esterase DAD2 OS=Petunia hybrida OX=4102 GN=DAD2 PE=1 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.3e-55 Identity = 107/258 (41.47%), Postives = 166/258 (64.34%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. Swiss-Prot
Match: sp|Q10QA5|D14_ORYSJ (Strigolactone esterase D14 OS=Oryza sativa subsp. japonica OX=39947 GN=D14 PE=1 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 8.5e-55 Identity = 101/258 (39.15%), Postives = 161/258 (62.40%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. Swiss-Prot
Match: sp|Q9SQR3|D14_ARATH (Strigolactone esterase D14 OS=Arabidopsis thaliana OX=3702 GN=D14 PE=1 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 4.7e-53 Identity = 100/258 (38.76%), Postives = 163/258 (63.18%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. Swiss-Prot
Match: sp|A0A109QYD3|RMS3_PEA (Strigolactone esterase RMS3 OS=Pisum sativum OX=3888 GN=RMS3 PE=1 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 4.7e-53 Identity = 99/246 (40.24%), Postives = 162/246 (65.85%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. Swiss-Prot
Match: sp|Q9SZU7|KAI2_ARATH (Probable esterase KAI2 OS=Arabidopsis thaliana OX=3702 GN=KAI2 PE=1 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 2.0e-51 Identity = 100/254 (39.37%), Postives = 158/254 (62.20%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. TrEMBL
Match: tr|A0A0A0LTX4|A0A0A0LTX4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G386590 PE=4 SV=1) HSP 1 Score: 545.4 bits (1404), Expect = 7.2e-152 Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. TrEMBL
Match: tr|A0A1S3CJ39|A0A1S3CJ39_CUCME (probable strigolactone esterase DAD2 OS=Cucumis melo OX=3656 GN=LOC103501538 PE=4 SV=1) HSP 1 Score: 530.0 bits (1364), Expect = 3.1e-147 Identity = 266/277 (96.03%), Postives = 272/277 (98.19%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. TrEMBL
Match: tr|A0A2N9H195|A0A2N9H195_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33664 PE=4 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 5.1e-97 Identity = 171/264 (64.77%), Postives = 214/264 (81.06%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. TrEMBL
Match: tr|A0A1R3IWA4|A0A1R3IWA4_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09420 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 6.7e-97 Identity = 172/260 (66.15%), Postives = 211/260 (81.15%), Query Frame = 0
BLAST of CsaV3_1G030830 vs. TrEMBL
Match: tr|A0A2I4ETZ7|A0A2I4ETZ7_9ROSI (strigolactone esterase D14 OS=Juglans regia OX=51240 GN=LOC108992697 PE=4 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 4.3e-96 Identity = 168/265 (63.40%), Postives = 214/265 (80.75%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |