CsaV3_1G030620 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G030620
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 17534982 .. 17535458 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCCGATCCGCAGGCGGAGACGAACTATGGTAATTTGTTCTAATCCGAGACATAAACAAAGATAAGGATAATCTTTATAAAAAAAAGTACCCCTAAGGGCCACCCACAATATACACATAAAAATAAATTAAAAGATCCGTTTTGTCGTTTTCTGGATTCTAATGGATAGTCCTTCGGACCATTAATCAGTCCTCTATTTTTTTCCATTAATTAGTTGCACTCCTTCTATATATTCTTTGCACCTCTCCTTTTCATGCGCTTCTCAACTCATATTACATTGAGCCTCTCTCTATGATCGTCCGGAGGCGCGAAGAACAAAAAGAAGGACGCAGATGTGCAAAGCAAAGAGCGCAAGACTAGAGAGGAACGCAACGATGAAATCCATATTAACCTGCCTCCTATGCTGAATATGGGGCACTTTGCTCCGTCCGAAGGCTCAAAGGATTTGAGGGACAGTCCTCCAGGTTGTTAA

mRNA sequence

ATGTCGTCCGATCCGCAGGCGGAGACGAACTATGGCGCGAAGAACAAAAAGAAGGACGCAGATGTGCAAAGCAAAGAGCGCAAGACTAGAGAGGAACGCAACGATGAAATCCATATTAACCTGCCTCCTATGCTGAATATGGGGCACTTTGCTCCGTCCGAAGGCTCAAAGGATTTGAGGGACAGTCCTCCAGGTTGTTAA

Coding sequence (CDS)

ATGTCGTCCGATCCGCAGGCGGAGACGAACTATGGCGCGAAGAACAAAAAGAAGGACGCAGATGTGCAAAGCAAAGAGCGCAAGACTAGAGAGGAACGCAACGATGAAATCCATATTAACCTGCCTCCTATGCTGAATATGGGGCACTTTGCTCCGTCCGAAGGCTCAAAGGATTTGAGGGACAGTCCTCCAGGTTGTTAA

Protein sequence

MSSDPQAETNYGAKNKKKDADVQSKERKTREERNDEIHINLPPMLNMGHFAPSEGSKDLRDSPPGC
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G030620.1CsaV3_1G030620.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..38

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G030620CSPI01G19380Wild cucumber (PI 183967)cpicucB000
The following gene(s) are paralogous to this gene:

None