CsaV3_1G030260 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTACCGCAACGGGCAGTGGGGTTCGGCGCGAAAACAACTTCCGCAGGTGGACCGATTCTGAGCTCCAAGCACGACGAGAAAAGGGACTTTGCTATCAGTGTGACGAACCGTTTAGCAAGGGACATCGCTGCAAAAACAAAGAGCTCCGCCTTTACCTTGTAG GTTACCGCAACGGGCAGTGGGGTTCGGCGCGAAAACAACTTCCGCAGGTGGACCGATTCTGAGCTCCAAGCACGACGAGAAAAGGGACTTTGCTATCAGTGTGACGAACCGTTTAGCAAGGGACATCGCTGCAAAAACAAAGAGCTCCGCCTTTACCTTGTAG GTTACCGCAACGGGCAGTGGGGTTCGGCGCGAAAACAACTTCCGCAGGTGGACCGATTCTGAGCTCCAAGCACGACGAGAAAAGGGACTTTGCTATCAGTGTGACGAACCGTTTAGCAAGGGACATCGCTGCAAAAACAAAGAGCTCCGCCTTTACCTTGTAG VTATGSGVRRENNFRRWTDSELQARREKGLCYQCDEPFSKGHRCKNKELRLYLVX
BLAST of CsaV3_1G030260 vs. NCBI nr
Match: ADN34016.1 (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 85.5 bits (210), Expect = 6.2e-14 Identity = 36/50 (72.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of CsaV3_1G030260 vs. NCBI nr
Match: XP_024028604.1 (uncharacterized protein LOC112093764 [Morus notabilis]) HSP 1 Score: 65.1 bits (157), Expect = 8.6e-08 Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 0
BLAST of CsaV3_1G030260 vs. NCBI nr
Match: XP_024018362.1 (uncharacterized protein LOC112090683 [Morus notabilis]) HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07 Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of CsaV3_1G030260 vs. NCBI nr
Match: CAN65491.1 (hypothetical protein VITISV_003157 [Vitis vinifera]) HSP 1 Score: 64.3 bits (155), Expect = 1.5e-07 Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0
BLAST of CsaV3_1G030260 vs. NCBI nr
Match: XP_019446853.1 (PREDICTED: uncharacterized protein LOC109350125 [Lupinus angustifolius]) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-07 Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0
BLAST of CsaV3_1G030260 vs. TrEMBL
Match: tr|E5GC18|E5GC18_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.1e-14 Identity = 36/50 (72.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of CsaV3_1G030260 vs. TrEMBL
Match: tr|A5BCT4|A5BCT4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_003157 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.7e-08 Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0
BLAST of CsaV3_1G030260 vs. TrEMBL
Match: tr|A5B2I6|A5B2I6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_043911 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 8.2e-07 Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 0
BLAST of CsaV3_1G030260 vs. TrEMBL
Match: tr|W9R6D8|W9R6D8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026170 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.4e-06 Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of CsaV3_1G030260 vs. TrEMBL
Match: tr|A0A2I0VA20|A0A2I0VA20_9ASPA (Putative mitochondrial protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca024112 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.1e-06 Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |