CsaV3_1G029860 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAAAGATGAGTGTGCGAAAGGAGATGAAGAAGAACAAGACCCTAGTATGTGTTCGAAAGGAACACCATCAATTGAAGGGGTTTCAGATGATGAGACTGAAGACGTAGCCTCTGATTCAGTACCAGATAAAGCGGCTGACGTTGTGACAGAAGTGAACAAAGAAGAAAATGTGGGGGACACAAGATCAAGTGACTTGAAGGTTAGTTTAAAGTATACTTTACTAATTAAGGCACACTGCTCCACAACAATTCTATATACGTGTTTAATCTTGTAAGAAGTTAGACATAACCCTGAAAACGTATTGACTAACTTTACGTGCACATATTTAACATATAATTCTACGTAGGTTGGAACTCCGTGTATGCTTGCGTTTGAAACTGAAGATACTATCATTGCACATGGGACAATATTTGATGCTGAAGGTGACGGTGAGAACATCAAGGTATCAGTGGATGTTGTCCTCGATGGCCAATGTGTGATTCCGAAACCGACAAAGGAAGGAGTCACCAAACTGACGCATGAAGTCGGATCACATTTAATGTGGCCACGACATCTTGTTCTTACTAGGAATGATAAGGTAATTGTCTGTCTTATTGTGTTGGAGTTTTTATGCATCAAATTATACTAACAGTAGTTGAACTTTTTGTGATAGAAGGAAACTGTGGGCTTCAATACGGATCCGTCCACATTCTCTAGTGCAGCATATCTACGTGCTCCAGTGGCACTCCGGTGTTTGGTTAGACTCGTTGAACATATGGGGTCATCGATTCAACTAAACACGCCTTCAGAGCTATTCGGTGTGAAGAGAAAATGTTGCATTATGGTTGAGTCACTGAGGGATTTCTCGTCAATGCAGCCAATATGCACATCATGCCTAGATGCTTACATGAT ATGAAAAAAGATGAGTGTGCGAAAGGAGATGAAGAAGAACAAGACCCTAGTATGTGTTCGAAAGGAACACCATCAATTGAAGGGGTTTCAGATGATGAGACTGAAGACGTAGCCTCTGATTCAGTACCAGATAAAGCGGCTGACGTTGTGACAGAAGTGAACAAAGAAGAAAATGTGGGGGACACAAGATCAAGTGACTTGAAGGTTGGAACTCCGTGTATGCTTGCGTTTGAAACTGAAGATACTATCATTGCACATGGGACAATATTTGATGCTGAAGGTGACGGTGAGAACATCAAGGTATCAGTGGATGTTGTCCTCGATGGCCAATGTGTGATTCCGAAACCGACAAAGGAAGGAGTCACCAAACTGACGCATGAAGTCGGATCACATTTAATGTGGCCACGACATCTTGTTCTTACTAGGAATGATAAGGAAACTGTGGGCTTCAATACGGATCCGTCCACATTCTCTAGTGCAGCATATCTACGTGCTCCAGTGGCACTCCGGTGTTTGGTTAGACTCGTTGAACATATGGGGTCATCGATTCAACTAAACACGCCTTCAGAGCTATTCGGTGTGAAGAGAAAATGTTGCATTATGGTTGAGTCACTGAGGGATTTCTCGTCAATGCAGCCAATATGCACATCATGCCTAGATGCTTACATGAT ATGAAAAAAGATGAGTGTGCGAAAGGAGATGAAGAAGAACAAGACCCTAGTATGTGTTCGAAAGGAACACCATCAATTGAAGGGGTTTCAGATGATGAGACTGAAGACGTAGCCTCTGATTCAGTACCAGATAAAGCGGCTGACGTTGTGACAGAAGTGAACAAAGAAGAAAATGTGGGGGACACAAGATCAAGTGACTTGAAGGTTGGAACTCCGTGTATGCTTGCGTTTGAAACTGAAGATACTATCATTGCACATGGGACAATATTTGATGCTGAAGGTGACGGTGAGAACATCAAGGTATCAGTGGATGTTGTCCTCGATGGCCAATGTGTGATTCCGAAACCGACAAAGGAAGGAGTCACCAAACTGACGCATGAAGTCGGATCACATTTAATGTGGCCACGACATCTTGTTCTTACTAGGAATGATAAGGAAACTGTGGGCTTCAATACGGATCCGTCCACATTCTCTAGTGCAGCATATCTACGTGCTCCAGTGGCACTCCGGTGTTTGGTTAGACTCGTTGAACATATGGGGTCATCGATTCAACTAAACACGCCTTCAGAGCTATTCGGTGTGAAGAGAAAATGTTGCATTATGGTTGAGTCACTGAGGGATTTCTCGTCAATGCAGCCAATATGCACATCATGCCTAGATGCTTACATGAT MKKDECAKGDEEEQDPSMCSKGTPSIEGVSDDETEDVASDSVPDKAADVVTEVNKEENVGDTRSSDLKVGTPCMLAFETEDTIIAHGTIFDAEGDGENIKVSVDVVLDGQCVIPKPTKEGVTKLTHEVGSHLMWPRHLVLTRNDKETVGFNTDPSTFSSAAYLRAPVALRCLVRLVEHMGSSIQLNTPSELFGVKRKCCIMVESLRDFSSMQPICTSCLDAYMX
BLAST of CsaV3_1G029860 vs. NCBI nr
Match: XP_011657179.1 (PREDICTED: uncharacterized protein LOC105435814 isoform X2 [Cucumis sativus]) HSP 1 Score: 295.0 bits (754), Expect = 2.1e-76 Identity = 144/150 (96.00%), Postives = 146/150 (97.33%), Query Frame = 0
BLAST of CsaV3_1G029860 vs. NCBI nr
Match: XP_011657178.1 (PREDICTED: uncharacterized protein LOC105435814 isoform X1 [Cucumis sativus]) HSP 1 Score: 290.4 bits (742), Expect = 5.1e-75 Identity = 144/151 (95.36%), Postives = 146/151 (96.69%), Query Frame = 0
BLAST of CsaV3_1G029860 vs. NCBI nr
Match: KGN47213.1 (hypothetical protein Csa_6G211850 [Cucumis sativus]) HSP 1 Score: 245.0 bits (624), Expect = 2.5e-61 Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = 0
BLAST of CsaV3_1G029860 vs. NCBI nr
Match: XP_022156878.1 (uncharacterized protein LOC111023711 [Momordica charantia]) HSP 1 Score: 120.6 bits (301), Expect = 7.0e-24 Identity = 64/172 (37.21%), Postives = 105/172 (61.05%), Query Frame = 0
BLAST of CsaV3_1G029860 vs. NCBI nr
Match: XP_016903672.1 (PREDICTED: uncharacterized protein LOC107992324, partial [Cucumis melo]) HSP 1 Score: 104.0 bits (258), Expect = 6.8e-19 Identity = 49/103 (47.57%), Postives = 72/103 (69.90%), Query Frame = 0
BLAST of CsaV3_1G029860 vs. TrEMBL
Match: tr|A0A0A0KCE4|A0A0A0KCE4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G211850 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.6e-61 Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = 0
BLAST of CsaV3_1G029860 vs. TrEMBL
Match: tr|A0A1S4E627|A0A1S4E627_CUCME (uncharacterized protein LOC107992324 OS=Cucumis melo OX=3656 GN=LOC107992324 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 4.5e-19 Identity = 49/103 (47.57%), Postives = 72/103 (69.90%), Query Frame = 0
BLAST of CsaV3_1G029860 vs. TrEMBL
Match: tr|A0A2P6QQA8|A0A2P6QQA8_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0390571 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 8.0e-16 Identity = 55/168 (32.74%), Postives = 86/168 (51.19%), Query Frame = 0
BLAST of CsaV3_1G029860 vs. TrEMBL
Match: tr|A0A1S4DWI8|A0A1S4DWI8_CUCME (uncharacterized protein LOC103490696 OS=Cucumis melo OX=3656 GN=LOC103490696 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.0e-15 Identity = 40/74 (54.05%), Postives = 56/74 (75.68%), Query Frame = 0
BLAST of CsaV3_1G029860 vs. TrEMBL
Match: tr|A0A2P6PI11|A0A2P6PI11_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0240601 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 6.7e-15 Identity = 55/168 (32.74%), Postives = 84/168 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |