CsaV3_1G028750 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G028750
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 15669245 .. 15670317 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATGGGTGGCCAGAGATGAATCTTCAAGGATAACAGAAGGGCAAGCTTCCTATGGTGATTACTGAAAAGAGATGAGGAGGGATCAGCGGGGATCAACGTGAAGTCTCGAAGTGGCCAAAGAAGAAGTCCGGGAGAAGACGACGAAGACAAGTTGGTTGCAATTAGTTCCTCCTGTGGTAGGTCCAAAAGAAGAAAAAGAAAGATGAGGAAGTTCGTAACGGTTGATGTTGAAGAACCCTAATTCTATCCACGTGTTTACCAAGTGGATGGGAGTGAGCTGGGACCGGAGACTTTCCACAAATGGGTCGAACAAGCTATGCCCTAATAGGCCAAAATTAAATAGGAGGTTTAAGACCCACTTGTAGACCGAAGTGGAAAGTTGGGGATTTCTCAGGGGACTTATCTACTCGAATTTTAATTTTAATGAGCTGAAGAAAACCAACTCAATTCATGTAAAATCAAAGAAATATGGAAAGGAGGGCCTTGGGTTTCTTTAGCAGAAGTTGGCAAAGAAGGTGTTGAGGGTCTAATTGTAAATCAAGTAAATGGGATCCAATTCATCGCCAAGTCAGAAAAGGGGAGAATAGTTGATGATAGATTTTCAGCCGAGTGTTATTTCGATTTAAACCCCAAATTTGACTTGCCATGGCAATACAGTACCCTCGTGGAAAAGCAAAACCTGATTGCACAGCAAACGCACCAAGGAAACCAACTCAATTCATGTAAAATCAAAGAAATATGGAAAGGAGGGCCTTGGGCTTCTTTAGCAGAAGTTGGCAAAGAAGGTGCTGAGGGTCTAATTGTAAATCAAGCAAATGGGATCCAATTCATCGCCAAGTCAGAAAAGGGGAGAAAAGTTGATGATAGATTTTCAGCCGAGTGTTATTTCGATTTAAACCCAAAATCTGACTTGCCATGGCAATACAGTACCCTCGTGGAAAAGCAAAACCTGATTGCACAGCAAACGCACCAAGAAAGAGAAGCCAAAGAGAAAGAAGACAGTCTAGTAGAAGAGCATGGGTACGGCGAAGGAACAAAGGGAGGGTGGATAACTTTCCAACTATCGTAG

mRNA sequence

ATGGCATGGGTGGCCAGAGATGAATCTTCAAGGATAACAGAAGGGCAAGCTTCCTATGCGGGGATCAACGTGAAGTCTCGAAGTGGCCAAAGAAGAAGTCCGGGAGAAGACGACGAAGACAAGTTGGTTGCAATTAGTTCCTCCTGTGAAAACCAACTCAATTCATGTAAAATCAAAGAAATATGGAAAGGAGGGCCTTGGGTTTCTTTAGCAGAAGTTGGCAAAGAAGGTGTTGAGGGTCTAATTGTAAATCAAGTAAATGGGATCCAATTCATCGCCAAGTCAGAAAAGGGGAGAATAGTTGATGATAGATTTTCAGCCGAGTGTTATTTCGATTTAAACCCCAAATTTGACTTGCCATGGCAATACAGTACCCTCGTGGAAAAGCAAAACCTGATTGCACAGCAAACGCACCAAGGAAACCAACTCAATTCATGTAAAATCAAAGAAATATGGAAAGGAGGGCCTTGGGCTTCTTTAGCAGAAGTTGGCAAAGAAGGTGCTGAGGGTCTAATTGTAAATCAAGCAAATGGGATCCAATTCATCGCCAAGTCAGAAAAGGGGAGAAAAGTTGATGATAGATTTTCAGCCGAGTGTTATTTCGATTTAAACCCAAAATCTGACTTGCCATGGCAATACAGTACCCTCGTGGAAAAGCAAAACCTGATTGCACAGCAAACGCACCAAGAAAGAGAAGCCAAAGAGAAAGAAGACAGTCTAGTAGAAGAGCATGGGTACGGCGAAGGAACAAAGGGAGGGTGGATAACTTTCCAACTATCGTAG

Coding sequence (CDS)

ATGGCATGGGTGGCCAGAGATGAATCTTCAAGGATAACAGAAGGGCAAGCTTCCTATGCGGGGATCAACGTGAAGTCTCGAAGTGGCCAAAGAAGAAGTCCGGGAGAAGACGACGAAGACAAGTTGGTTGCAATTAGTTCCTCCTGTGAAAACCAACTCAATTCATGTAAAATCAAAGAAATATGGAAAGGAGGGCCTTGGGTTTCTTTAGCAGAAGTTGGCAAAGAAGGTGTTGAGGGTCTAATTGTAAATCAAGTAAATGGGATCCAATTCATCGCCAAGTCAGAAAAGGGGAGAATAGTTGATGATAGATTTTCAGCCGAGTGTTATTTCGATTTAAACCCCAAATTTGACTTGCCATGGCAATACAGTACCCTCGTGGAAAAGCAAAACCTGATTGCACAGCAAACGCACCAAGGAAACCAACTCAATTCATGTAAAATCAAAGAAATATGGAAAGGAGGGCCTTGGGCTTCTTTAGCAGAAGTTGGCAAAGAAGGTGCTGAGGGTCTAATTGTAAATCAAGCAAATGGGATCCAATTCATCGCCAAGTCAGAAAAGGGGAGAAAAGTTGATGATAGATTTTCAGCCGAGTGTTATTTCGATTTAAACCCAAAATCTGACTTGCCATGGCAATACAGTACCCTCGTGGAAAAGCAAAACCTGATTGCACAGCAAACGCACCAAGAAAGAGAAGCCAAAGAGAAAGAAGACAGTCTAGTAGAAGAGCATGGGTACGGCGAAGGAACAAAGGGAGGGTGGATAACTTTCCAACTATCGTAG

Protein sequence

MAWVARDESSRITEGQASYAGINVKSRSGQRRSPGEDDEDKLVAISSSCENQLNSCKIKEIWKGGPWVSLAEVGKEGVEGLIVNQVNGIQFIAKSEKGRIVDDRFSAECYFDLNPKFDLPWQYSTLVEKQNLIAQQTHQGNQLNSCKIKEIWKGGPWASLAEVGKEGAEGLIVNQANGIQFIAKSEKGRKVDDRFSAECYFDLNPKSDLPWQYSTLVEKQNLIAQQTHQEREAKEKEDSLVEEHGYGEGTKGGWITFQLS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G028750.1CsaV3_1G028750.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..247

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G028750CSPI01G17490Wild cucumber (PI 183967)cpicucB000
CsaV3_1G028750CsGy1G017680Cucumber (Gy14) v2cgybcucB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G028750Cucumber (Chinese Long) v3cuccucB032
CsaV3_1G028750Silver-seed gourdcarcucB0142
CsaV3_1G028750Silver-seed gourdcarcucB0537
CsaV3_1G028750Cucumber (Gy14) v2cgybcucB165
CsaV3_1G028750Cucumber (Gy14) v1cgycucB413
CsaV3_1G028750Cucumber (Gy14) v1cgycucB533
CsaV3_1G028750Cucurbita maxima (Rimu)cmacucB0012
CsaV3_1G028750Cucurbita maxima (Rimu)cmacucB0067
CsaV3_1G028750Cucurbita maxima (Rimu)cmacucB0111
CsaV3_1G028750Cucurbita maxima (Rimu)cmacucB0517
CsaV3_1G028750Cucurbita moschata (Rifu)cmocucB0001
CsaV3_1G028750Cucurbita moschata (Rifu)cmocucB0054
CsaV3_1G028750Cucurbita moschata (Rifu)cmocucB0100
CsaV3_1G028750Cucurbita pepo (Zucchini)cpecucB0429
CsaV3_1G028750Cucurbita pepo (Zucchini)cpecucB0670
CsaV3_1G028750Cucurbita pepo (Zucchini)cpecucB0796
CsaV3_1G028750Cucurbita pepo (Zucchini)cpecucB0954
CsaV3_1G028750Wild cucumber (PI 183967)cpicucB204
CsaV3_1G028750Bottle gourd (USVL1VR-Ls)cuclsiB074
CsaV3_1G028750Bottle gourd (USVL1VR-Ls)cuclsiB085
CsaV3_1G028750Melon (DHL92) v3.5.1cucmeB054
CsaV3_1G028750Melon (DHL92) v3.5.1cucmeB086
CsaV3_1G028750Melon (DHL92) v3.6.1cucmedB052
CsaV3_1G028750Melon (DHL92) v3.6.1cucmedB081
CsaV3_1G028750Watermelon (Charleston Gray)cucwcgB073
CsaV3_1G028750Watermelon (Charleston Gray)cucwcgB074
CsaV3_1G028750Watermelon (97103) v1cucwmB047
CsaV3_1G028750Watermelon (97103) v1cucwmB091
CsaV3_1G028750Watermelon (97103) v2cucwmbB062
CsaV3_1G028750Watermelon (97103) v2cucwmbB063
CsaV3_1G028750Wax gourdcucwgoB081
CsaV3_1G028750Wax gourdcucwgoB104