CsaV3_1G028030 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G028030
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionthiamine-repressible mitochondrial transport protein THI74-like
Locationchr1 : 14966668 .. 14967814 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGTATTGACAACAGAGGAGGCAAAATTTAGTACAAAGCAAATTGCTGTTTTGGCTCTCACAATTGGTCCCATTTGGTTTGTTTCTGAGGTTAGTAAATTAATTTTTGTTTATTTTGTTCCATTTTCTTTTTAAGGAAAGTTTGATTTTGTTTTCTTGGAAAGGCTTTCTAAATTTGTTTTTTTTTTTTTTTAAAATAGGTATATAGCTCTATTAATTTAGGTATACGTCATTTGGTTCAAACATGAAAAATCAACTTTTAAATTCAATTATTTCTTTCAACCCCACACCTCATCAAAACTTTAAACGACTAAGTACACAAAAGGTGGTTAATTTCAATTTCTTAATTTAGTGGCCTTTGGACGTATATTATTATTTTGATTTTGAATAAAATAAAAACAAGTGAATGATTCAAATATGTTAATATTATAAGACATAACCATATTTGGATATCGGTAAAGTTGATATGAATTTTATCACCAACTTGTCACAAGTTGGACTTGACGTGTGAAATAATAATATTAAAAAAAAGAAAACTTTGTTAGGACCCAATTGAGAATGACAAAAGATTTATGGATGAAATTAGGAATTAATTCAAACGTACGTTAAAGAATAACTTTTGTAAAATTATAGCACAAATTTTACCAACAAAAGCTATATTTTTGTACGATATTTTTAATACAAGCATGATTCTACTGCTAATAACATTTTACTTACCTCATTTACAAATTTCTTAATTTTTGCAGTATTTTACAAATGCAGCATTGGCAAGAACAAGGGTAGCAACCACCGCCATATTATTCTCAACATCAGGCCTATTCACACTCATACTCGACGCTTGCTTGGAACGACAATCTTTATCTATTGTCAATGTTGTTGCAGTCATCGTTAGCATGGTCGGCGTCGTCATGACTACCATCGGCAAGACTGGGGCTCAAGATGAAGCTCAATCCTCCTCTTCTATGTATGTTTTGTTTAGATTTATAAGTAGGAAAGAACGTCTTCATTGATACATTGCAAAGTAAAGACACCAACTCTCAAGAATAATTATATATCCTCCGTATTTAGGCACAGAAGTCACTCGTTTATTGGAGATGGATTTGCTCTACTCTCTTCTCTAACGGACGAACTCTACTATGGTTAG

mRNA sequence

ATGAGAGTATTGACAACAGAGGAGGCAAAATTTAGTACAAAGCAAATTGCTGTTTTGGCTCTCACAATTGGTCCCATTTGGTTTGTTTCTGAGTATTTTACAAATGCAGCATTGGCAAGAACAAGGGTAGCAACCACCGCCATATTATTCTCAACATCAGGCCTATTCACACTCATACTCGACGCTTGCTTGGAACGACAATCTTTATCTATTGTCAATGTTGTTGCAGTCATCGTTAGCATGGTCGGCGTCGTCATGACTACCATCGGCAAGACTGGGGCTCAAGATGAAGCTCAATCCTCCTCTTCTATGCACAGAAGTCACTCGTTTATTGGAGATGGATTTGCTCTACTCTCTTCTCTAACGGACGAACTCTACTATGGTTAG

Coding sequence (CDS)

ATGAGAGTATTGACAACAGAGGAGGCAAAATTTAGTACAAAGCAAATTGCTGTTTTGGCTCTCACAATTGGTCCCATTTGGTTTGTTTCTGAGTATTTTACAAATGCAGCATTGGCAAGAACAAGGGTAGCAACCACCGCCATATTATTCTCAACATCAGGCCTATTCACACTCATACTCGACGCTTGCTTGGAACGACAATCTTTATCTATTGTCAATGTTGTTGCAGTCATCGTTAGCATGGTCGGCGTCGTCATGACTACCATCGGCAAGACTGGGGCTCAAGATGAAGCTCAATCCTCCTCTTCTATGCACAGAAGTCACTCGTTTATTGGAGATGGATTTGCTCTACTCTCTTCTCTAACGGACGAACTCTACTATGGTTAG

Protein sequence

MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLILDACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFIGDGFALLSSLTDELYYG
Homology
[Close]
BLAST of CsaV3_1G028030 vs. NCBI nr
Match: XP_004150510.1 (PREDICTED: thiamine-repressible mitochondrial transport protein THI74-like [Cucumis sativus])

HSP 1 Score: 233.0 bits (593), Expect = 5.6e-58
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL 60
           MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL
Sbjct: 1   MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL 60

Query: 61  DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFIGDGFALLSS 120
           DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFIGDGFALLSS
Sbjct: 61  DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFIGDGFALLSS 120

Query: 121 LTDELYY 128
           LTDELYY
Sbjct: 121 LTDELYY 127

[Close]
BLAST of CsaV3_1G028030 vs. NCBI nr
Match: XP_008444044.1 (PREDICTED: uncharacterized transporter C405.03c-like [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47
Identity = 107/127 (84.25%), Postives = 114/127 (89.76%), Query Frame = 0 

Query: 1   MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL 60
           MR+L TEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALART VATT ILFSTSGLFTLIL
Sbjct: 79  MRILKTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTSVATTTILFSTSGLFTLIL 138

Query: 61  DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFIGDGFALLSS 120
           DACLERQSL+IVN VAV+VSM GVVMTT+GKT A+DE QSSS  H  HSF+GD FALLS+
Sbjct: 139 DACLERQSLTIVNAVAVVVSMAGVVMTTVGKTWAKDEPQSSSYGHGKHSFVGDAFALLSA 198

Query: 121 LTDELYY 128
           LTD LYY
Sbjct: 199 LTDGLYY 205

[Close]
BLAST of CsaV3_1G028030 vs. NCBI nr
Match: XP_011648470.1 (PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 2.6e-47
Identity = 106/127 (83.46%), Postives = 115/127 (90.55%), Query Frame = 0 

Query: 1   MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL 60
           MR+L TE+AKFSTKQ+AVLALTIGPIWFVSEYFTNAALART VATT ILFSTSGLFTLIL
Sbjct: 1   MRILKTEKAKFSTKQVAVLALTIGPIWFVSEYFTNAALARTSVATTTILFSTSGLFTLIL 60

Query: 61  DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFIGDGFALLSS 120
           +ACLERQSL+IVNVVAVIVSM GV MTT+GKT A+DE QSSSS H  HSF+GD FALLS+
Sbjct: 61  NACLERQSLTIVNVVAVIVSMAGVAMTTVGKTWARDEPQSSSSGHGKHSFVGDAFALLSA 120

Query: 121 LTDELYY 128
           LTD LYY
Sbjct: 121 LTDGLYY 127

[Close]
BLAST of CsaV3_1G028030 vs. NCBI nr
Match: XP_008444043.1 (PREDICTED: uncharacterized transporter C405.03c-like [Cucumis melo])

HSP 1 Score: 196.1 bits (497), Expect = 7.6e-47
Identity = 106/127 (83.46%), Postives = 115/127 (90.55%), Query Frame = 0 

Query: 1   MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL 60
           MR+L T EAKF+TKQIAVLALTIGPIWFVSEYFT AALART VATTAILFSTS LFTLI 
Sbjct: 143 MRILKTVEAKFNTKQIAVLALTIGPIWFVSEYFTYAALARTSVATTAILFSTSSLFTLIF 202

Query: 61  DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFIGDGFALLSS 120
           DACLE+QSL+ V VVAVIVSM GVVMTT+GKTGA+DEA SSSS+H+ HSFIGDGFALLS+
Sbjct: 203 DACLEQQSLTTVRVVAVIVSMAGVVMTTMGKTGARDEASSSSSVHKKHSFIGDGFALLSA 262

Query: 121 LTDELYY 128
           LTD LYY
Sbjct: 263 LTDGLYY 269

[Close]
BLAST of CsaV3_1G028030 vs. NCBI nr
Match: KGN65101.1 (hypothetical protein Csa_1G217860 [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 2.1e-44
Identity = 106/111 (95.50%), Postives = 107/111 (96.40%), Query Frame = 0 

Query: 1   MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL 60
           MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL
Sbjct: 1   MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL 60

Query: 61  DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFI 112
           DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSM+    FI
Sbjct: 61  DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMYVLFRFI 111

[Close]
BLAST of CsaV3_1G028030 vs. TAIR10
Match: AT4G32140.1 (EamA-like transporter family)

HSP 1 Score: 116.7 bits (291), Expect = 1.1e-26
Identity = 64/120 (53.33%), Postives = 88/120 (73.33%), Query Frame = 0 

Query: 7   EEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLILDACLER 66
           +  + +TKQIA+  L + PIWFV+EY +NAALART VA+T +L STSGLFTL +   L +
Sbjct: 135 QRKEITTKQIAMYGLYLAPIWFVTEYLSNAALARTSVASTTVLSSTSGLFTLFIGVFLGQ 194

Query: 67  QSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFIGDGFALLSSLTDELY 126
            +L++  VVAV VSM GVVMTT+GKT A DE+Q +SS++   S +GD F LLS+++  L+
Sbjct: 195 DTLNLSKVVAVFVSMAGVVMTTLGKTWASDESQLNSSLNGERSLMGDLFGLLSAVSYGLF 254

[Close]
BLAST of CsaV3_1G028030 vs. Swiss-Prot
Match: sp|Q04083|THI74_YEAST (Thiamine-repressible mitochondrial transport protein THI74 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=THI74 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 39/118 (33.05%), Postives = 61/118 (51.69%), Query Frame = 0 

Query: 9   AKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLILDACLERQS 68
           A    K    L+L    +WFV+    NAAL+ T VA++ IL STS  FTL L   L  ++
Sbjct: 110 ADTKVKDTMRLSLLFCVLWFVANLAANAALSYTTVASSTILSSTSSFFTLFLATSLGIET 169

Query: 69  LSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFIGDGFALLSSLTDELY 127
            S   ++ + VS+ G+++  +  +  QD   +SS +      +G+  ALL SL   +Y
Sbjct: 170 FSTKKLLGLFVSLFGIILIVMQSSKQQDSVSASSFL------VGNTLALLGSLGYSVY 221

[Close]
BLAST of CsaV3_1G028030 vs. Swiss-Prot
Match: sp|O94654|YGF3_SCHPO (Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC405.03c PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 6.4e-05
Identity = 36/118 (30.51%), Postives = 63/118 (53.39%), Query Frame = 0 

Query: 5   TTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLILDACL 64
           T   +    +Q A L+L    IWF + YF+N++L  T VA+  I+ S SG FTL L   +
Sbjct: 91  TRPNSPLGFRQTAYLSLGFCIIWFAANYFSNSSLGFTNVASFTIISSMSGFFTLGLGTIV 150

Query: 65  ERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSS-SSMHRSHSFIGDGFALLSSL 122
             +  ++  ++A++ S+ GV++        QD  Q+  +    S   +G+ +ALL++L
Sbjct: 151 NVERFTLSKLLALMASVGGVIIVV-----TQDAKQADLNDSPPSRPALGNAYALLAAL 203

[Close]
BLAST of CsaV3_1G028030 vs. Swiss-Prot
Match: sp|Q03730|YMB8_YEAST (Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YML018C PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.2e-04
Identity = 27/63 (42.86%), Postives = 38/63 (60.32%), Query Frame = 0 

Query: 26  IWFVSEYFTNAALARTRVATTAILFSTSGLFTLILDACLERQSLSIVNVVAVIVSMVGVV 85
           +WF +   TNA+LA T VA+  IL +TS  FTL + A    +SLS   V+   +S VG++
Sbjct: 136 LWFTANLVTNASLAFTSVASQTILSTTSSFFTLFIGAICHVESLSKSKVLGSFISFVGII 195

Query: 86  MTT 89
           M T
Sbjct: 196 MVT 198

[Close]
BLAST of CsaV3_1G028030 vs. TrEMBL
Match: tr|A0A1S3B9F8|A0A1S3B9F8_CUCME (uncharacterized transporter C405.03c-like OS=Cucumis melo OX=3656 GN=LOC103487495 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.7e-48
Identity = 107/127 (84.25%), Postives = 114/127 (89.76%), Query Frame = 0 

Query: 1   MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL 60
           MR+L TEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALART VATT ILFSTSGLFTLIL
Sbjct: 79  MRILKTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTSVATTTILFSTSGLFTLIL 138

Query: 61  DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFIGDGFALLSS 120
           DACLERQSL+IVN VAV+VSM GVVMTT+GKT A+DE QSSS  H  HSF+GD FALLS+
Sbjct: 139 DACLERQSLTIVNAVAVVVSMAGVVMTTVGKTWAKDEPQSSSYGHGKHSFVGDAFALLSA 198

Query: 121 LTDELYY 128
           LTD LYY
Sbjct: 199 LTDGLYY 205

[Close]
BLAST of CsaV3_1G028030 vs. TrEMBL
Match: tr|A0A1S3B906|A0A1S3B906_CUCME (uncharacterized transporter C405.03c-like OS=Cucumis melo OX=3656 GN=LOC103487494 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.0e-47
Identity = 106/127 (83.46%), Postives = 115/127 (90.55%), Query Frame = 0 

Query: 1   MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL 60
           MR+L T EAKF+TKQIAVLALTIGPIWFVSEYFT AALART VATTAILFSTS LFTLI 
Sbjct: 143 MRILKTVEAKFNTKQIAVLALTIGPIWFVSEYFTYAALARTSVATTAILFSTSSLFTLIF 202

Query: 61  DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFIGDGFALLSS 120
           DACLE+QSL+ V VVAVIVSM GVVMTT+GKTGA+DEA SSSS+H+ HSFIGDGFALLS+
Sbjct: 203 DACLEQQSLTTVRVVAVIVSMAGVVMTTMGKTGARDEASSSSSVHKKHSFIGDGFALLSA 262

Query: 121 LTDELYY 128
           LTD LYY
Sbjct: 263 LTDGLYY 269

[Close]
BLAST of CsaV3_1G028030 vs. TrEMBL
Match: tr|A0A0A0LYQ6|A0A0A0LYQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G217860 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44
Identity = 106/111 (95.50%), Postives = 107/111 (96.40%), Query Frame = 0 

Query: 1   MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL 60
           MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL
Sbjct: 1   MRVLTTEEAKFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLIL 60

Query: 61  DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFI 112
           DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSM+    FI
Sbjct: 61  DACLERQSLSIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMYVLFRFI 111

[Close]
BLAST of CsaV3_1G028030 vs. TrEMBL
Match: tr|A0A0A0LWA1|A0A0A0LWA1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G220860 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.5e-32
Identity = 80/100 (80.00%), Postives = 87/100 (87.00%), Query Frame = 0 

Query: 28  FVSEYFTNAALARTRVATTAILFSTSGLFTLILDACLERQSLSIVNVVAVIVSMVGVVMT 87
           F  +YFTNAALART VATT ILFSTSGLFTLIL+ACLERQSL+IVNVVAVIVSM GV MT
Sbjct: 8   FFLQYFTNAALARTSVATTTILFSTSGLFTLILNACLERQSLTIVNVVAVIVSMAGVAMT 67

Query: 88  TIGKTGAQDEAQSSSSMHRSHSFIGDGFALLSSLTDELYY 128
           T+GKT A+DE QSSSS H  HSF+GD FALLS+LTD LYY
Sbjct: 68  TVGKTWARDEPQSSSSGHGKHSFVGDAFALLSALTDGLYY 107

[Close]
BLAST of CsaV3_1G028030 vs. TrEMBL
Match: tr|A0A2I4GSI5|A0A2I4GSI5_9ROSI (uncharacterized transporter C405.03c-like OS=Juglans regia OX=51240 GN=LOC109010461 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.8e-29
Identity = 71/117 (60.68%), Postives = 97/117 (82.91%), Query Frame = 0 

Query: 10  KFSTKQIAVLALTIGPIWFVSEYFTNAALARTRVATTAILFSTSGLFTLILDACLERQSL 69
           K STK++A L L IGPIWF+SEYF NAAL RT VA+T ILFSTSGLF +++++ L + S+
Sbjct: 141 KLSTKEVATLGLFIGPIWFLSEYFMNAALERTSVASTTILFSTSGLFVILIESMLGQASV 200

Query: 70  SIVNVVAVIVSMVGVVMTTIGKTGAQDEAQSSSSMHRSHSFIGDGFALLSSLTDELY 127
           ++VN+V+V VSM GVVMTT GKT A++E+QS++S+ R+HSF+G  FALLS++TD L+
Sbjct: 201 NVVNLVSVSVSMAGVVMTTYGKTWAENESQSNTSLDRNHSFLGYVFALLSAMTDGLF 257

The following BLAST results are available for this feature:
BLAST of CsaV3_1G028030 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150510.15.6e-58100.00PREDICTED: thiamine-repressible mitochondrial transport protein THI74-like [Cucu... [more]
XP_008444044.11.2e-4784.25PREDICTED: uncharacterized transporter C405.03c-like [Cucumis melo][more]
XP_011648470.12.6e-4783.46PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Cucumis sativ... [more]
XP_008444043.17.6e-4783.46PREDICTED: uncharacterized transporter C405.03c-like [Cucumis melo][more]
KGN65101.12.1e-4495.50hypothetical protein Csa_1G217860 [Cucumis sativus][more]
BLAST of CsaV3_1G028030 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G32140.11.1e-2653.33EamA-like transporter family[more]
BLAST of CsaV3_1G028030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q04083|THI74_YEAST1.2e-0633.05Thiamine-repressible mitochondrial transport protein THI74 OS=Saccharomyces cere... [more]
sp|O94654|YGF3_SCHPO6.4e-0530.51Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ... [more]
sp|Q03730|YMB8_YEAST3.2e-0442.86Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (s... [more]
BLAST of CsaV3_1G028030 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B9F8|A0A1S3B9F8_CUCME7.7e-4884.25uncharacterized transporter C405.03c-like OS=Cucumis melo OX=3656 GN=LOC10348749... [more]
tr|A0A1S3B906|A0A1S3B906_CUCME5.0e-4783.46uncharacterized transporter C405.03c-like OS=Cucumis melo OX=3656 GN=LOC10348749... [more]
tr|A0A0A0LYQ6|A0A0A0LYQ6_CUCSA1.4e-4495.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G217860 PE=4 SV=1[more]
tr|A0A0A0LWA1|A0A0A0LWA1_CUCSA3.5e-3280.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G220860 PE=4 SV=1[more]
tr|A0A2I4GSI5|A0A2I4GSI5_9ROSI2.8e-2960.68uncharacterized transporter C405.03c-like OS=Juglans regia OX=51240 GN=LOC109010... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G028030.1CsaV3_1G028030.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF16913PUNUTcoord: 6..104
e-value: 3.7E-8
score: 32.9
NoneNo IPR availablePANTHERPTHR23051SOLUTE CARRIER FAMILY 35, MEMBER F5coord: 8..125
NoneNo IPR availablePANTHERPTHR23051:SF7SUBFAMILY NOT NAMEDcoord: 8..125
NoneNo IPR availableSUPERFAMILYSSF103481Multidrug resistance efflux transporter EmrEcoord: 12..91

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G028030Cla97C06G120860Watermelon (97103) v2cucwmbB063
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G028030Silver-seed gourdcarcucB0142
CsaV3_1G028030Cucumber (Gy14) v2cgybcucB001
CsaV3_1G028030Cucurbita maxima (Rimu)cmacucB0067
CsaV3_1G028030Cucurbita maxima (Rimu)cmacucB0111
CsaV3_1G028030Cucurbita moschata (Rifu)cmocucB0054
CsaV3_1G028030Cucurbita moschata (Rifu)cmocucB0100
CsaV3_1G028030Cucurbita pepo (Zucchini)cpecucB0429
CsaV3_1G028030Cucurbita pepo (Zucchini)cpecucB0796
CsaV3_1G028030Wild cucumber (PI 183967)cpicucB011
CsaV3_1G028030Bottle gourd (USVL1VR-Ls)cuclsiB073
CsaV3_1G028030Bottle gourd (USVL1VR-Ls)cuclsiB084
CsaV3_1G028030Melon (DHL92) v3.5.1cucmeB054
CsaV3_1G028030Melon (DHL92) v3.6.1cucmedB052
CsaV3_1G028030Watermelon (Charleston Gray)cucwcgB074
CsaV3_1G028030Watermelon (97103) v1cucwmB091
CsaV3_1G028030Wax gourdcucwgoB104