CsaV3_1G027860 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCTTTGTTGGCACAGCGTAGCGCCAATGGCATTGAACTACGACGCTACATTTCCAACTCACCGCTACCCCCAATATTGGTTCTTCGTCTCCGACCTCTCCTCCTAATTTAGAACACTTAAATCTCGGCCTCTTCAAAGAACATATATCTTTAATATATCTTGCTATTCGGTTCAAAATCATTTCCGCTGCCAAATTATCTCCGGTTTCCGATCCCCTGAGGCCTCTGGCCTCCGACCTTCCACCTCCGTCCTCCTCTTCTTTTTGCTCGCTTTTGAGGAGCGATGGGGATTCTCTATGGAATGGTCGCCAGAGGACCCGTTGTTTTGGCAGAGTTCAGCTCTACACAGACGAATGCAAGTGCTATTGCGAGGCAGATCATGGAGAAGATGAAACAAGGAGACGATGATAGCAATGCTTCCTATTCTCATGATCGGTACATCTTTCATATTAAGAAGACTGATGGCCTCACCGTTCTTTGTATGGCCGACGAAGCCTCCGGAAGTAAGTCTTTTCTGTGATTTCATTTCTTGATTTTTTTTCTGATGCTTAGTTCGAAATTTCAATCCAGCAAGGATTTCAGGCACGGTTCTTAATAGAGATAACAATAATAGGTTTTCTTAGTGATACTTGAGGAAAGGAAATGCGTTATGTGAATCTTTTTCTGGTAGTTTTTACGATGCTATGCTTTTGATAAACGATTCTGAGTTCTATGCGTTGATTTCTGTCCCTTAAAATTGCGAATGAGCTTTTGTAGCTTGGGGATTGGGTGAAATTGTGACGACTTCGTTATTTTCCTCATTCTATTTGTTCGAACCATGTGGATGTGTAATATTATCAAGAGCGTAGAACATTATCTATCGCATTTTAAACCGAAAATTTGGACGTTCTCTGCTTGTGTTGTAATTGTCTGTTAACTGAATTTCAATGTTCTTAAGGACAGAATAAACTGTTTTGCTCAGACGGATTTGTTTGAAATGATTTCTTGATTTACTGTGTATAATCAATGGTTTCTACTACTTCACTCACTAGGCCGTATAAATCTGAGAAAGTAAAGAATTGATCCGGTTATATGAATCTTCTTTCTATTTGATGGAGAATTGCAAGAAAAAAGTTAATTTACAAGTCGTAGGCTGCTTCTGCAAATTCACCTTAAAGCTTCTACGAGATAGTGTATTTTCTGTTTGGTTTCCGTCTGATAATTTCCTTGAAACATAATGCAAACAAATCATATTTCCTGCCGAACTTCAAACACCAAGTTTATCAACATTGAACAACTTTCGTGTAAATAGTATATGATGTATTAAAATAGCGTTGCTTTAGTTCTTGTTGAACTCTTGGAAAGTTTTTAGATCAAGATTGATTGCTCTGAATTTGATTCTACTTGTGTTGAAATTCAACAGCCATCTTATACAGATCAACTCTTCTCTGAGTTGGTAGTTTCACTGCCAACTTGATCAGATATTAAAGGATGATAATCATAATTCTATCAATATTTGTGTAGGGAGAATTCCTTTTGCATTTCTAGAAGACATTCATCAAAGATTTGTAAAGACCTATGCTCGCACAATTCTCTCAGCTCCTGCATATGCCATGAACGATGAATTTTCAAGGGTTCTAAGCCAACAGATGGACCATTTTTCAAATGATCCAAATGCAGATAGGCTAAACCGCTTAAAAGGTGAAATGAGTCAGGCAAGTTCAGAAAATTATCTAATAAATTCTGTTTGATCAAAGCAAATTGTTCGAGTAATTGACCATTTGAAATAAACGGTTCCTAGTGATTTTCAAAGTTTAGCTAATACTAACAGTCGTTGACGTTTCCCACCGGTACGTAACTATAGATTTAATTAGCTATATCATAGTACATAAAAGAAAGACTTCGATGATAGATAAGAATATTCCTAATGGTTCAAATGCGAATAGGCTAAACTGTAGTCAGGCAAGTTTAGGAAACTTCTATCGAACTCTATTTGAATTTTTATCTAAGAAGTTCATCCCATCATCTTTTGAAACAACGGTTCTCTGTGCTTTCCAAACTCCCAGCTCACAATCCTTACTGTCCATTAATTTTGACTCTTCAATAAAGTTAATTAACATTGTGAATCCGACCAAAGTCACACATCCGTTAGATAAGGAGATGATCTTGGATATATAATTAAGGACAACTATAAGCTTTTGGAAAGATACCAAAAGCAAAATCATGACTGTTAGATGGGATGCTTGTCCTAACAAGCATCAAAGTACTTTTAAGAAATATTTTGTTCTAGGACGATGATATATAATTTCTCCCATCAGTTTACTTTTGGGTCTAGTTTTTATATATCTTGTTCTTATGCGAGATTGACAATGAATATTATATTAACATTTCATTTTCATCATCCAGTATAGAATAAAAAGAAGCATATAATGATTAAGATAACTGTCTTTAAAGAAAACTTGTTCACATTGGGTGAGTATTTGGTTTTGGAATACTTCAATTATGCCGGAATAGAATACTTCTCTCAGCCTTTCGGCTTAGATCAAGTGTTATTATGCCAGAATAGAAATTCATCAAACATTGGTATTTGACGCAGGTGAGGAATGTGATGATGGATAATATAGAGAAAGTGTTGGAAAGAGGTGACCGGTTGACTTTGCTGGTGGAGAAAACCACAAACATTCAAGGAAATGCAGTTCGATTTCGAAGGCAATCACGACGCTACAGAAACACCTTGTGGTGGAAAAACTTTAAACTCACGTAAGTACTTTCGACCATATTTGTATATTTTGTACACACTCACCCACTCAATTAAGAAAGTGTTAGCACGAATTATATCAATAAGTAGTCACTTCATGCATTATACTAAGTTTTTTTAAGTTTGGTAAGTTGCCTCAAAATAGGTACGACTATTATCAAATCATCATAGAAATAATATTAAAAAGAAAAATAAAAAGAGAAAAAACTCAAACGGATGACTTGTTAAGCATAAATTTAATCTTTCTAATATATTCCCTAATCAATTATTGAGAAAGAGTCAGCCATGTATTTAGTCCACTGCGATTTAGAGATTTTTACGTCTATCCTTCCCGCCAACTGCGATCCTCTGTTTTCATTGCTGATGGGCCCCAATGATTTAAAAATCAATCATAGAAAGAAAATAAAAAGGGGTGGAAAATAATATTTGAGAACGTGGTTAGCCATGCTCATGTGGTAATTATGATAGACTTTTATAGTAAATATGGGAGGAAGTGTATAAGTAAATGCTTTATGTCTATCACAGAAAGAGAATATGGGTTTTTTCAGTATAACAATTTAGGTGTAGGGAATTGAAACTCCAACTGGAGGGACGGAAGCTGGCTGGCAAATCTCTTGAACATGTACTTCTCTGTTATCTCCGTAAACGGTTTCATCAATCACATGGGATTGTGAGCTGCGCTGCTAGGCAGCCGGTTGAAAGGAAATTTTCTAGTACCATGGTACTAGTAGAGAATAATAGTCTGTCACTTTCATATGGAATCCAAAATTACTTATTAGAAATCAAAGCCACAATTGATTATGACCTTCTGCCCATGATATTATTTTGAGTAATCGTGTGCTAATCCTGTCTACAGATGTTCATTGATGCTCATTTTCCCGATCGTCCTTTACATCATGCTAGCATTCTTCTGCAAAGGGCCGCTACTGCCGTCTTGCTTGAATTAGAATAGAGTGCAGAAGATGCAGCTAAGTGATCTTTTATCACTTTGTTCAAGAACATGTACCTTATTTTATCAAATTTGTACAATGAAATATATGTGCAGTTTAAATCTTATTCTGCAAAATATAATGTACAGACAACGCTCAAATTTGAATCCACTTTCATGCATTGCAACCTTCGTATGCCAATAGGCGCAGGCGCTGGAAGCATCAAATTCCTCCTCCTTTGCTACCCAGAAGTTATGACAATTTTCCCGGTAAGATATGCAAATCTACATTCACTCGTTTACACTTTGAGAGAAAATTACTAGAAGTCATTTATATGCAATTTTGTTTTTAC ATGGGGATTCTCTATGGAATGGTCGCCAGAGGACCCGTTGTTTTGGCAGAGTTCAGCTCTACACAGACGAATGCAAGTGCTATTGCGAGGCAGATCATGGAGAAGATGAAACAAGGAGACGATGATAGCAATGCTTCCTATTCTCATGATCGGTACATCTTTCATATTAAGAAGACTGATGGCCTCACCGTTCTTTGTATGGCCGACGAAGCCTCCGGAAGGAGAATTCCTTTTGCATTTCTAGAAGACATTCATCAAAGATTTGTAAAGACCTATGCTCGCACAATTCTCTCAGCTCCTGCATATGCCATGAACGATGAATTTTCAAGGGTTCTAAGCCAACAGATGGACCATTTTTCAAATGATCCAAATGCAGATAGGCTAAACCGCTTAAAAGGTGAAATGAGTCAGGTGAGGAATGTGATGATGGATAATATAGAGAAAGTGTTGGAAAGAGGTGACCGGTTGACTTTGCTGGTGGAGAAAACCACAAACATTCAAGGAAATGCAGTTCGATTTCGAAGGCAATCACGACGCTACAGAAACACCTTGTGGTGGAAAAACTTTAAACTCACATGTTCATTGATGCTCATTTTCCCGATCGTCCTTTACATCATGCTAGCATTCTTCTGCAAAGGGCCGCTACTGCCGTCTTGCTTGAATTAG ATGGGGATTCTCTATGGAATGGTCGCCAGAGGACCCGTTGTTTTGGCAGAGTTCAGCTCTACACAGACGAATGCAAGTGCTATTGCGAGGCAGATCATGGAGAAGATGAAACAAGGAGACGATGATAGCAATGCTTCCTATTCTCATGATCGGTACATCTTTCATATTAAGAAGACTGATGGCCTCACCGTTCTTTGTATGGCCGACGAAGCCTCCGGAAGGAGAATTCCTTTTGCATTTCTAGAAGACATTCATCAAAGATTTGTAAAGACCTATGCTCGCACAATTCTCTCAGCTCCTGCATATGCCATGAACGATGAATTTTCAAGGGTTCTAAGCCAACAGATGGACCATTTTTCAAATGATCCAAATGCAGATAGGCTAAACCGCTTAAAAGGTGAAATGAGTCAGGTGAGGAATGTGATGATGGATAATATAGAGAAAGTGTTGGAAAGAGGTGACCGGTTGACTTTGCTGGTGGAGAAAACCACAAACATTCAAGGAAATGCAGTTCGATTTCGAAGGCAATCACGACGCTACAGAAACACCTTGTGGTGGAAAAACTTTAAACTCACATGTTCATTGATGCTCATTTTCCCGATCGTCCTTTACATCATGCTAGCATTCTTCTGCAAAGGGCCGCTACTGCCGTCTTGCTTGAATTAG MGILYGMVARGPVVLAEFSSTQTNASAIARQIMEKMKQGDDDSNASYSHDRYIFHIKKTDGLTVLCMADEASGRRIPFAFLEDIHQRFVKTYARTILSAPAYAMNDEFSRVLSQQMDHFSNDPNADRLNRLKGEMSQVRNVMMDNIEKVLERGDRLTLLVEKTTNIQGNAVRFRRQSRRYRNTLWWKNFKLTCSLMLIFPIVLYIMLAFFCKGPLLPSCLN
BLAST of CsaV3_1G027860 vs. NCBI nr
Match: XP_004150529.1 (PREDICTED: vesicle-associated membrane protein 713-like [Cucumis sativus] >KGN65117.1 hypothetical protein Csa_1G226450 [Cucumis sativus]) HSP 1 Score: 438.3 bits (1126), Expect = 1.5e-119 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. NCBI nr
Match: XP_016899833.1 (PREDICTED: vesicle-associated membrane protein 711-like [Cucumis melo]) HSP 1 Score: 429.5 bits (1103), Expect = 7.0e-117 Identity = 216/221 (97.74%), Postives = 219/221 (99.10%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. NCBI nr
Match: XP_022134688.1 (vesicle-associated membrane protein 711-like [Momordica charantia]) HSP 1 Score: 411.8 bits (1057), Expect = 1.5e-111 Identity = 206/221 (93.21%), Postives = 214/221 (96.83%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. NCBI nr
Match: XP_023516909.1 (vesicle-associated membrane protein 711-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 408.7 bits (1049), Expect = 1.3e-110 Identity = 206/221 (93.21%), Postives = 215/221 (97.29%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. NCBI nr
Match: XP_022987855.1 (vesicle-associated membrane protein 711-like [Cucurbita maxima]) HSP 1 Score: 407.5 bits (1046), Expect = 2.9e-110 Identity = 205/221 (92.76%), Postives = 215/221 (97.29%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. TAIR10
Match: AT5G11150.1 (vesicle-associated membrane protein 713) HSP 1 Score: 315.5 bits (807), Expect = 2.7e-86 Identity = 150/219 (68.49%), Postives = 188/219 (85.84%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. TAIR10
Match: AT4G32150.1 (vesicle-associated membrane protein 711) HSP 1 Score: 298.1 bits (762), Expect = 4.4e-81 Identity = 144/220 (65.45%), Postives = 182/220 (82.73%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. TAIR10
Match: AT2G25340.1 (vesicle-associated membrane protein 712) HSP 1 Score: 290.4 bits (742), Expect = 9.2e-79 Identity = 142/220 (64.55%), Postives = 180/220 (81.82%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. TAIR10
Match: AT5G22360.1 (vesicle-associated membrane protein 714) HSP 1 Score: 246.9 bits (629), Expect = 1.2e-65 Identity = 119/219 (54.34%), Postives = 163/219 (74.43%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. TAIR10
Match: AT3G54300.1 (vesicle-associated membrane protein 727) HSP 1 Score: 125.9 bits (315), Expect = 3.0e-29 Identity = 76/229 (33.19%), Postives = 131/229 (57.21%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. Swiss-Prot
Match: sp|Q9LFP1|VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana OX=3702 GN=VAMP713 PE=1 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 4.8e-85 Identity = 150/219 (68.49%), Postives = 188/219 (85.84%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. Swiss-Prot
Match: sp|O49377|VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana OX=3702 GN=VAMP711 PE=1 SV=2) HSP 1 Score: 298.1 bits (762), Expect = 8.0e-80 Identity = 144/220 (65.45%), Postives = 182/220 (82.73%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. Swiss-Prot
Match: sp|Q9SIQ9|VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana OX=3702 GN=VAMP712 PE=2 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 1.7e-77 Identity = 142/220 (64.55%), Postives = 180/220 (81.82%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. Swiss-Prot
Match: sp|Q9FMR5|VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana OX=3702 GN=VAMP714 PE=1 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.1e-64 Identity = 119/219 (54.34%), Postives = 163/219 (74.43%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. Swiss-Prot
Match: sp|Q86AQ7|VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum OX=44689 GN=vamp7B PE=3 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.8e-40 Identity = 87/214 (40.65%), Postives = 134/214 (62.62%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. TrEMBL
Match: tr|A0A0A0LWB2|A0A0A0LWB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G226450 PE=3 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 1.0e-119 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. TrEMBL
Match: tr|A0A1S4DV36|A0A1S4DV36_CUCME (vesicle-associated membrane protein 711-like OS=Cucumis melo OX=3656 GN=LOC103487414 PE=3 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 4.6e-117 Identity = 216/221 (97.74%), Postives = 219/221 (99.10%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. TrEMBL
Match: tr|A0A2I4DYI3|A0A2I4DYI3_9ROSI (vesicle-associated membrane protein 711-like OS=Juglans regia OX=51240 GN=LOC108984637 PE=3 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 1.7e-90 Identity = 165/220 (75.00%), Postives = 194/220 (88.18%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. TrEMBL
Match: tr|I3T6Y7|I3T6Y7_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 9.1e-89 Identity = 166/222 (74.77%), Postives = 193/222 (86.94%), Query Frame = 0
BLAST of CsaV3_1G027860 vs. TrEMBL
Match: tr|A0A1S2YQS6|A0A1S2YQS6_CICAR (vesicle-associated membrane protein 711-like OS=Cicer arietinum OX=3827 GN=LOC101496256 PE=3 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 3.5e-88 Identity = 162/222 (72.97%), Postives = 193/222 (86.94%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |