CsaV3_1G027800 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G027800
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Protease Do-like 7-like protein
Location	chr1 : 14677252 .. 14679423 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAACTTGTCGAATGATTTCCATCTCTGCTTATCTTCACCTAAGGGAAGATGAATGAATGATCTACCACCAGTATGAGGCCAAACAATGCATCTCAATACCCAACCATTTTTAGTTCTGAAAACTTCAACCCTTTCGTTTTCAACTTTTTCATTCTTACAGAAGTAAGAATCATCTAATCTTCAGTTTATTTCTGAAATGGCTTCATGAAACCAAATAAGCTGTGAATTCAATATTGGTAGGATTATGCTGGCTTTGACATCTTCCACTTGGAAAACTTCATTCTTGTGCCAAATGCAGAAAACAAGTTATCTATTTTACAGCTTTCAACTTCCATCTCTAACTTCGAATTCATACAAAAAGGTAGACTTTGTTCGCTGGAAAAACTGAGGAGGATGGTCTGACTTAGCGCTCGCCGATGATCTTAGGAGGATTGTTTGGAAAGCAGTGTTGTTGGTGTTCTGAGGGAGATGATCTGGAAGGCAATCGTCGTACTGCTATGGCTACGGGAAATAGAGAAAGAACCGAAGAGGGTTGCGGAGAACGGAGAGAACTTACCTTGTGGTCATCCCAATCTATGATGGTTTCCTCGTAATTTTACTAAAACATGAATATGTAGAGCAGTGGAAAGGTTATAGGATGGGATTGGAAGGCTGTTTGTATGTAGTTTCTTTTGGGTGGGGGCTCTCTCATCCACCAGCCCTTAGCTTATTGCTCTTTTGCTTTTCTGAATATATTCTATCTCTAAAAAATATTTGTTTCTTATTAAATTTTTTTTTATGTAATATCACTCAGTCTGCTTGCTTCTTCTGTTTGGTAGATGAAATAAAGATAGCAAACATTGTAAAAAATTGGTTGAAAACCTGTTCCATGGAAGTGTGCAACGGACATGGATAAGCGAATGAAATGATACTCTTGCATGACTGTTTTATTCGTGAATGTTCACCTTGACATGCTTCATCCATTTGTGTTTTGTGGGATTATGTTACTAAAGTATTTTCATGTCGTTTTTTCTCAATGTGGTATTGAACTTGATCGGCTTATGATGTGAACTTTAGGTACAGGATCTACATTCCATAACTCCTGACTACTTTTTAGAAGTAGGCGGTGCAGTGATACATCCTCTTTCATACCAGCAGGTGGGTGGAAACTACAGTTTTTTTATGTTGCAAAAAGTGTCTATTCACATTCTATTGTTGACTTTCCATTGATGCCTTGGACATTTTATAGTTTTCATTATTTACTTGCATGGTCAGTATATTAAAGCTAATGTTTGCTTCATAATTTTCCTGCCTGTGTCGACTGTTTCCCTATGGCCACCTTTTAAGTCAAATTTCATCTCCTCCACGTGGAGTTTGTATCCTTTGAGGAATCTTCTCTTTTAATTATTCAATGAAAAATGTTTTTTAATTAAAAAAATTGTAAAAATAAAAAAACATGTGACATTTTCTCAGGAAGTAATCAACTGCCCCCCATTTCCTTGTAAAAGTTTTAGCTTGGTTATTGCTTTCATACTCAATATGGGAGCTATAACATGTATCACTTTTTTAATCAATTTTTTGTCAAGTAATCGTCTGCACGACCTTGTGCGTACTAAATCCATGCTTAACTATCTTCTTGGGTCGCTCTTGATCATTTTTTTTAATGATTATGCCTTTTGAATAGCACCATAACTTAGTTTTTAAAAACAAGCGCAGTCAACTATTTTCTTGTTTTGAGACAGCTCATTTTGAAAGTCTCTCTTTGGTGTTCCTAGACAATCCTTTGGTGTGTTTTCTCTTCATGATATAAGTTTGAATTGGGCTGCCTTCTAATTCTAATTTATTTTTCACATTTTTCTTTTATCATCCGTATTTTCTTTACTGCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTTTCCTTTGTAGAGCTTGTAATCTTTTGAACATTAGTCTCTTTTTAATTATTTTATTTTATTATTTAATACTTCTTATTTCTTTCAAACAACACCATAACTTAGTTTAGCTTTTCATCAATGCAGGCCAGAAACTTTCGTTTTAAATGTGGTCTTGTCTATGTTACGGAACCAGGGTATGTTTATAGTGATCTTATGTTGGTTCTTATGTTATTTTTAGTAGAATACTCTCTCTTAGTCACAGCCATGTGCAGTTTAGATTATTATTAG

mRNA sequence

ATGATCTTAGGAGGATTGTTTGGAAAGCAGTGTTGTTGGTGTTCTGAGGGAGATGATCTGGAAGGCAATCGTCGTACTGCTATGGCTACGGGAAATAGAGAAAGAACCGAAGAGGGTTGCGGAGAACGGAGAGAACTTACCTTGTGGTCATCCCAATCTATGATGGTACAGGATCTACATTCCATAACTCCTGACTACTTTTTAGAAGTAGGCGGTGCAGTGATACATCCTCTTTCATACCAGCAGGCCAGAAACTTTCGTTTTAAATGTGGTCTTGTCTATGTTACGGAACCAGGGTATGTTTATAGTGATCTTATGTTGGTTCTTATGTTATTTTTAGTAGAATACTCTCTCTTAGTCACAGCCATGTGCAGTTTAGATTATTATTAG

Coding sequence (CDS)

ATGATCTTAGGAGGATTGTTTGGAAAGCAGTGTTGTTGGTGTTCTGAGGGAGATGATCTGGAAGGCAATCGTCGTACTGCTATGGCTACGGGAAATAGAGAAAGAACCGAAGAGGGTTGCGGAGAACGGAGAGAACTTACCTTGTGGTCATCCCAATCTATGATGGTACAGGATCTACATTCCATAACTCCTGACTACTTTTTAGAAGTAGGCGGTGCAGTGATACATCCTCTTTCATACCAGCAGGCCAGAAACTTTCGTTTTAAATGTGGTCTTGTCTATGTTACGGAACCAGGGTATGTTTATAGTGATCTTATGTTGGTTCTTATGTTATTTTTAGTAGAATACTCTCTCTTAGTCACAGCCATGTGCAGTTTAGATTATTATTAG

Protein sequence

MILGGLFGKQCCWCSEGDDLEGNRRTAMATGNRERTEEGCGERRELTLWSSQSMMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYVYSDLMLVLMLFLVEYSLLVTAMCSLDYY

Homology

[Close]

BLAST of CsaV3_1G027800 vs. NCBI nr
Match: XP_004149795.1 (PREDICTED: protease Do-like 7 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-18
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 54  MMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYV 102
           ++VQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGY+
Sbjct: 367 LVVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYM 414

[Close]

BLAST of CsaV3_1G027800 vs. NCBI nr
Match: XP_008457070.1 (PREDICTED: protease Do-like 7 isoform X1 [Cucumis melo])

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-18
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 54  MMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYV 102
           ++VQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGY+
Sbjct: 367 LVVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYM 414

[Close]

BLAST of CsaV3_1G027800 vs. NCBI nr
Match: XP_008457071.1 (PREDICTED: protease Do-like 7 isoform X2 [Cucumis melo])

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-18
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 54  MMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYV 102
           ++VQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGY+
Sbjct: 367 LVVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYM 414

[Close]

BLAST of CsaV3_1G027800 vs. NCBI nr
Match: XP_008457072.1 (PREDICTED: protease Do-like 7 isoform X3 [Cucumis melo])

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-18
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 54  MMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYV 102
           ++VQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGY+
Sbjct: 135 LVVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYM 182

[Close]

BLAST of CsaV3_1G027800 vs. NCBI nr
Match: XP_022948498.1 (protease Do-like 7 [Cucurbita moschata])

HSP 1 Score: 99.4 bits (246), Expect = 9.7e-18
Identity = 44/48 (91.67%), Postives = 47/48 (97.92%), Query Frame = 0


Query: 54  MMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYV 102
           ++VQDLHSITPDYFLEV GAVIHPLSYQQARNFRFKCGLVYVTEPGY+
Sbjct: 367 LVVQDLHSITPDYFLEVSGAVIHPLSYQQARNFRFKCGLVYVTEPGYM 414

[Close]

BLAST of CsaV3_1G027800 vs. TAIR10
Match: AT3G03380.1 (DegP protease 7)

HSP 1 Score: 91.3 bits (225), Expect = 4.8e-19
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 0


Query: 37  EEGCGERRELTLWS-----SQSMMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCG 96
           ++G G+  EL +       S S+ VQDLHSITPD+FLEV GAVIHPLSYQQARNFRF CG
Sbjct: 344 DDGVGQILELEIERGGQPLSVSVSVQDLHSITPDHFLEVSGAVIHPLSYQQARNFRFPCG 403

Query: 97  LVYVTEPGYV 102
           L YV +PGY+
Sbjct: 404 LAYVADPGYM 413

[Close]

BLAST of CsaV3_1G027800 vs. Swiss-Prot
Match: sp|Q8RY22|DEGP7_ARATH (Protease Do-like 7 OS=Arabidopsis thaliana OX=3702 GN=DEGP7 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.7e-18
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 0


Query: 37  EEGCGERRELTLWS-----SQSMMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCG 96
           ++G G+  EL +       S S+ VQDLHSITPD+FLEV GAVIHPLSYQQARNFRF CG
Sbjct: 344 DDGVGQILELEIERGGQPLSVSVSVQDLHSITPDHFLEVSGAVIHPLSYQQARNFRFPCG 403

Query: 97  LVYVTEPGYV 102
           L YV +PGY+
Sbjct: 404 LAYVADPGYM 413

[Close]

BLAST of CsaV3_1G027800 vs. Swiss-Prot
Match: sp|O74325|YH05_SCHPO (PDZ domain-containing protein C1685.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1685.05 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.1e-07
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 54  MMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGL-VYVTEPG 100
           + VQDLH++TP  FLEVGGAV+H LSYQ AR+++F      YV   G
Sbjct: 386 LTVQDLHNVTPSRFLEVGGAVLHDLSYQLARSYQFSLNSGTYVASSG 432

[Close]

BLAST of CsaV3_1G027800 vs. Swiss-Prot
Match: sp|Q2H334|NM111_CHAGB (Pro-apoptotic serine protease NMA111 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=NMA111 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.5e-06
Identity = 25/44 (56.82%), Postives = 28/44 (63.64%), Query Frame = 0


Query: 56  VQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPG 100
           V DLHSITPD F+ V G   H LSYQQAR +   C  V+V E G
Sbjct: 393 VGDLHSITPDRFVSVAGGSFHSLSYQQARLYGVACKGVFVCEAG 436

[Close]

BLAST of CsaV3_1G027800 vs. Swiss-Prot
Match: sp|Q1E3N5|NM111_COCIM (Pro-apoptotic serine protease NMA111 OS=Coccidioides immitis (strain RS) OX=246410 GN=NMA111 PE=3 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 5.8e-06
Identity = 24/42 (57.14%), Postives = 28/42 (66.67%), Query Frame = 0


Query: 56  VQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTE 98
           VQDLH+ITP  ++ V GA  H LSYQQAR +   C  VYV E
Sbjct: 393 VQDLHAITPSRYVTVAGATFHDLSYQQARLYAIACKGVYVCE 434

[Close]

BLAST of CsaV3_1G027800 vs. Swiss-Prot
Match: sp|Q7S9D2|NM111_NEUCR (Pro-apoptotic serine protease nma111 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=nma111 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.8e-06
Identity = 25/44 (56.82%), Postives = 27/44 (61.36%), Query Frame = 0


Query: 56  VQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPG 100
           V DLH ITPD F+ V G   H LSYQQAR +   C  VYV E G
Sbjct: 386 VGDLHQITPDRFVSVSGGSFHNLSYQQARLYGVACKGVYVCEAG 429

[Close]

BLAST of CsaV3_1G027800 vs. TrEMBL
Match: tr|A0A1S3C5Y4|A0A1S3C5Y4_CUCME (protease Do-like 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496840 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 54  MMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYV 102
           ++VQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGY+
Sbjct: 367 LVVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYM 414

[Close]

BLAST of CsaV3_1G027800 vs. TrEMBL
Match: tr|A0A1S3C490|A0A1S3C490_CUCME (protease Do-like 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496840 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 54  MMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYV 102
           ++VQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGY+
Sbjct: 367 LVVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYM 414

[Close]

BLAST of CsaV3_1G027800 vs. TrEMBL
Match: tr|A0A1S3C4R7|A0A1S3C4R7_CUCME (protease Do-like 7 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496840 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 54  MMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYV 102
           ++VQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGY+
Sbjct: 135 LVVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYM 182

[Close]

BLAST of CsaV3_1G027800 vs. TrEMBL
Match: tr|A0A1Q3BZ23|A0A1Q3BZ23_CEPFO (PDZ_1 domain-containing protein/PDZ_2 domain-containing protein/Trypsin_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_16616 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.4e-18
Identity = 44/49 (89.80%), Postives = 47/49 (95.92%), Query Frame = 0


Query: 53  SMMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYV 102
           ++MVQDLHSITPDYFLEV GAVIHPLSYQQARNFRF CGLVYVTEPGY+
Sbjct: 364 NLMVQDLHSITPDYFLEVSGAVIHPLSYQQARNFRFHCGLVYVTEPGYM 412

[Close]

BLAST of CsaV3_1G027800 vs. TrEMBL
Match: tr|A0A2P5E758|A0A2P5E758_9ROSA (Peptidase S1C OS=Trema orientalis OX=63057 GN=TorRG33x02_228130 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-17
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 0


Query: 54  MMVQDLHSITPDYFLEVGGAVIHPLSYQQARNFRFKCGLVYVTEPGYV 102
           +MVQDLHSITPDYFLEV GAVIHPLSYQQARNFRF CGLVYVTEPGY+
Sbjct: 367 LMVQDLHSITPDYFLEVSGAVIHPLSYQQARNFRFHCGLVYVTEPGYM 414

The following BLAST results are available for this feature:

BLAST of CsaV3_1G027800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149795.1	2.0e-18	93.75	PREDICTED: protease Do-like 7 [Cucumis sativus]	[more]
XP_008457070.1	2.0e-18	93.75	PREDICTED: protease Do-like 7 isoform X1 [Cucumis melo]	[more]
XP_008457071.1	2.0e-18	93.75	PREDICTED: protease Do-like 7 isoform X2 [Cucumis melo]	[more]
XP_008457072.1	2.0e-18	93.75	PREDICTED: protease Do-like 7 isoform X3 [Cucumis melo]	[more]
XP_022948498.1	9.7e-18	91.67	protease Do-like 7 [Cucurbita moschata]	[more]

BLAST of CsaV3_1G027800 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03380.1	4.8e-19	64.29	DegP protease 7	[more]

BLAST of CsaV3_1G027800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RY22\|DEGP7_ARATH	8.7e-18	64.29	Protease Do-like 7 OS=Arabidopsis thaliana OX=3702 GN=DEGP7 PE=2 SV=1	[more]
sp\|O74325\|YH05_SCHPO	3.1e-07	55.32	PDZ domain-containing protein C1685.05 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
sp\|Q2H334\|NM111_CHAGB	4.5e-06	56.82	Pro-apoptotic serine protease NMA111 OS=Chaetomium globosum (strain ATCC 6205 / ...	[more]
sp\|Q1E3N5\|NM111_COCIM	5.8e-06	57.14	Pro-apoptotic serine protease NMA111 OS=Coccidioides immitis (strain RS) OX=2464...	[more]
sp\|Q7S9D2\|NM111_NEUCR	5.8e-06	56.82	Pro-apoptotic serine protease nma111 OS=Neurospora crassa (strain ATCC 24698 / 7...	[more]

BLAST of CsaV3_1G027800 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C5Y4\|A0A1S3C5Y4_CUCME	1.3e-18	93.75	protease Do-like 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496840 PE=4 SV=1	[more]
tr\|A0A1S3C490\|A0A1S3C490_CUCME	1.3e-18	93.75	protease Do-like 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496840 PE=4 SV=1	[more]
tr\|A0A1S3C4R7\|A0A1S3C4R7_CUCME	1.3e-18	93.75	protease Do-like 7 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496840 PE=4 SV=1	[more]
tr\|A0A1Q3BZ23\|A0A1Q3BZ23_CEPFO	8.4e-18	89.80	PDZ_1 domain-containing protein/PDZ_2 domain-containing protein/Trypsin_2 domain...	[more]
tr\|A0A2P5E758\|A0A2P5E758_9ROSA	1.1e-17	91.67	Peptidase S1C OS=Trema orientalis OX=63057 GN=TorRG33x02_228130 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025926	PDZ-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G027800.1	CsaV3_1G027800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025926	PDZ-like domain	PFAM	PF12812	PDZ_1	coord: 61..101 e-value: 4.8E-13 score: 48.9
None	No IPR available	PANTHER	PTHR22939:SF66	PRO-APOPTOTIC SERINE PROTEASE NMA111	coord: 52..102
None	No IPR available	PANTHER	PTHR22939	SERINE PROTEASE FAMILY S1C HTRA-RELATED	coord: 52..102

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G027800	Watermelon (97103) v2	cucwmbB063
CsaV3_1G027800	Wax gourd	cucwgoB104
CsaV3_1G027800	Silver-seed gourd	carcucB0042
CsaV3_1G027800	Silver-seed gourd	carcucB0142
CsaV3_1G027800	Cucumber (Gy14) v2	cgybcucB001
CsaV3_1G027800	Cucurbita maxima (Rimu)	cmacucB0067
CsaV3_1G027800	Cucurbita maxima (Rimu)	cmacucB0111
CsaV3_1G027800	Cucurbita moschata (Rifu)	cmocucB0054
CsaV3_1G027800	Cucurbita moschata (Rifu)	cmocucB0100
CsaV3_1G027800	Cucurbita pepo (Zucchini)	cpecucB0429
CsaV3_1G027800	Cucurbita pepo (Zucchini)	cpecucB0796
CsaV3_1G027800	Wild cucumber (PI 183967)	cpicucB011
CsaV3_1G027800	Bottle gourd (USVL1VR-Ls)	cuclsiB073
CsaV3_1G027800	Melon (DHL92) v3.5.1	cucmeB054
CsaV3_1G027800	Melon (DHL92) v3.6.1	cucmedB052
CsaV3_1G027800	Watermelon (Charleston Gray)	cucwcgB074
CsaV3_1G027800	Watermelon (97103) v1	cucwmB091