CsaV3_1G024380 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATAACTTATTAATGATTTCATTTCTCACATTAGATGGAGCGGCGTTATACCATTGTCAGAACTGTCAGCAAATATGTTGATCACCTACCGAATGTTTTTTGATCGGCTGATCAACTCTCAGGTAGTAAAATATTATACCAATATTGCGTAGGCATGTTTTTTGTTGTTTCCTTATGTTCGTTTTTTTTAACAGATTAATTGGACACCATACACGTCCCACATTATGGCATTGCTTCCACGTCAATGTCATAACGGTCAAGCGATGTGGACATATGTGGGTCCTATGATTTGCTTTCATCTCGTTGAGAAGCATCAAGCAGATCGTGTATTGCGACAGTTCCATATGCTACAAATGCCACCAGAGTTTTGCTCCACAGATCAGGGCCTACACCAAATTGATTTAAGAGGCAAGCACGATCAAGATTGGAGTAGGATTCATGCAGAGCATATAGCAATGTGGCATTCACGAAATAATTTTTGTGCCGAAGCAGAAGCAACACAGAAGCTGACAGTATCAGATAACTACTTTTTCTGGTACACGTCGATTACCCGACGCTTCATGACACCTGATGGCGCTTACTGTTATTGCATGGTAATAGTTTTAATATGATTTATAAATTTAATACAAACATGAACATTTTTTAATTATATTATTTACAATCGTTCAGAATAATTTTGTTGAAGACGTACGTCGAGTCTCCATGGAAAACAATTTTGAAATTTTTAGTCCAATGTGTGACGAAGTCATGGGAGATATAGACAACCTTGTTCAGCGGACTCGACGTTTAAATGTTGCCGACACAGATCGTAGACGCATTCGACGGTGACGACGACGACAAGGCGATGATGTCGTAGAGGGAGATGGGGAAGCTTCTTAAGTTGTATAATTTAAGTGTTTTTAAATTTTGCTAGAACTTATTCAAGTTATATAAATAAAAAGTTGAACTTTTTTAAATTAATTATAAATTAGAAGTTGC ATGTTGATCACCTACCGAATGTTTTTTGATCGGCTGATCAACTCTCAGATTAATTGGACACCATACACGTCCCACATTATGGCATTGCTTCCACGTCAATGTCATAACGGTCAAGCGATGTGGACATATGTGGGTCCTATGATTTGCTTTCATCTCGTTGAGAAGCATCAAGCAGATCGTGTATTGCGACAGTTCCATATGCTACAAATGCCACCAGAGTTTTGCTCCACAGATCAGGGCCTACACCAAATTGATTTAAGAGGCAAGCACGATCAAGATTGGAGTAGGATTCATGCAGAGCATATAGCAATGTGGCATTCACGAAATAATTTTTGTGCCGAAGCAGAAGCAACACAGAAGCTGACAGTATCAGATAACTACTTTTTCTGGTACACGTCGATTACCCGACGCTTCATGACACCTGATGGCGCTTACTGTTATTGCATGAATAATTTTGTTGAAGACGTACGTCGAGTCTCCATGGAAAACAATTTTGAAATTTTTAGTCCAATGTGTGACGAAGTCATGGGAGATATAGACAACCTTGTTCAGCGGACTCGACGTTTAAATGTTGCCGACACAGATCGTAGACGCATTCGACGGTGA ATGTTGATCACCTACCGAATGTTTTTTGATCGGCTGATCAACTCTCAGATTAATTGGACACCATACACGTCCCACATTATGGCATTGCTTCCACGTCAATGTCATAACGGTCAAGCGATGTGGACATATGTGGGTCCTATGATTTGCTTTCATCTCGTTGAGAAGCATCAAGCAGATCGTGTATTGCGACAGTTCCATATGCTACAAATGCCACCAGAGTTTTGCTCCACAGATCAGGGCCTACACCAAATTGATTTAAGAGGCAAGCACGATCAAGATTGGAGTAGGATTCATGCAGAGCATATAGCAATGTGGCATTCACGAAATAATTTTTGTGCCGAAGCAGAAGCAACACAGAAGCTGACAGTATCAGATAACTACTTTTTCTGGTACACGTCGATTACCCGACGCTTCATGACACCTGATGGCGCTTACTGTTATTGCATGAATAATTTTGTTGAAGACGTACGTCGAGTCTCCATGGAAAACAATTTTGAAATTTTTAGTCCAATGTGTGACGAAGTCATGGGAGATATAGACAACCTTGTTCAGCGGACTCGACGTTTAAATGTTGCCGACACAGATCGTAGACGCATTCGACGGTGA MLITYRMFFDRLINSQINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQKLTVSDNYFFWYTSITRRFMTPDGAYCYCMNNFVEDVRRVSMENNFEIFSPMCDEVMGDIDNLVQRTRRLNVADTDRRRIRR
BLAST of CsaV3_1G024380 vs. NCBI nr
Match: XP_008459571.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X2 [Cucumis melo]) HSP 1 Score: 287.7 bits (735), Expect = 3.0e-74 Identity = 129/201 (64.18%), Postives = 160/201 (79.60%), Query Frame = 0
BLAST of CsaV3_1G024380 vs. NCBI nr
Match: XP_016902435.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis melo]) HSP 1 Score: 287.7 bits (735), Expect = 3.0e-74 Identity = 129/201 (64.18%), Postives = 160/201 (79.60%), Query Frame = 0
BLAST of CsaV3_1G024380 vs. NCBI nr
Match: XP_016903693.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo]) HSP 1 Score: 191.8 bits (486), Expect = 2.2e-45 Identity = 88/136 (64.71%), Postives = 106/136 (77.94%), Query Frame = 0
BLAST of CsaV3_1G024380 vs. NCBI nr
Match: XP_011656076.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]) HSP 1 Score: 178.7 bits (452), Expect = 2.0e-41 Identity = 77/107 (71.96%), Postives = 91/107 (85.05%), Query Frame = 0
BLAST of CsaV3_1G024380 vs. NCBI nr
Match: XP_022152173.1 (serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Momordica charantia]) HSP 1 Score: 176.0 bits (445), Expect = 1.3e-40 Identity = 85/199 (42.71%), Postives = 120/199 (60.30%), Query Frame = 0
BLAST of CsaV3_1G024380 vs. TAIR10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases) HSP 1 Score: 121.7 bits (304), Expect = 5.2e-28 Identity = 57/138 (41.30%), Postives = 81/138 (58.70%), Query Frame = 0
BLAST of CsaV3_1G024380 vs. Swiss-Prot
Match: sp|Q9LNG5|PPP7L_ARATH (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 9.3e-27 Identity = 57/138 (41.30%), Postives = 81/138 (58.70%), Query Frame = 0
BLAST of CsaV3_1G024380 vs. TrEMBL
Match: tr|A0A1S4E383|A0A1S4E383_CUCME (serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 2.0e-74 Identity = 129/201 (64.18%), Postives = 160/201 (79.60%), Query Frame = 0
BLAST of CsaV3_1G024380 vs. TrEMBL
Match: tr|A0A1S3CBQ7|A0A1S3CBQ7_CUCME (serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 2.0e-74 Identity = 129/201 (64.18%), Postives = 160/201 (79.60%), Query Frame = 0
BLAST of CsaV3_1G024380 vs. TrEMBL
Match: tr|A0A1S4E636|A0A1S4E636_CUCME (serine/threonine-protein phosphatase 7 long form homolog OS=Cucumis melo OX=3656 GN=LOC107992364 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45 Identity = 88/136 (64.71%), Postives = 106/136 (77.94%), Query Frame = 0
BLAST of CsaV3_1G024380 vs. TrEMBL
Match: tr|E5GC81|E5GC81_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 4.0e-35 Identity = 67/95 (70.53%), Postives = 78/95 (82.11%), Query Frame = 0
BLAST of CsaV3_1G024380 vs. TrEMBL
Match: tr|A0A2N9HYE0|A0A2N9HYE0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46809 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 7.9e-31 Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |