CsaV3_1G021860 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G021860
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Auxin-responsive protein
Location	chr1 : 12823937 .. 12827995 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGGGAAAGAAAATGGAAGATATATTCAATTCAGATATCAAAAAGTAGTTGGGAAGAAGAAATTAATTTTAATTGTCCCCTAAAACTCTGTGATTTTGGTCTCAGAATGAAAATTCAGAACCACATCTCTGCGATGATTTATATGTTCATGTCAGCTTTCTCAAAATTCCCTCACTTTCCACGACTTCTCGTTTTCTTTCGCCAAACCCCCCATTTTCACTTTTTTTTTTTTTCTAACCCACAAAGAAGAAAACCCTAATCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTTTCTTATTTCAATTGAATTTTCCTTCAAAATCTGACCACTTCTTACAATTTCAGACTCTGCTTTCGTCCTATCCTTTTCCGCATTCCCGTGTTACGCTGCTTTCAATTTTTTACACTGTTTAATGCTGTCGCTTGGCGCTCTCTGAAAGAGAAGATAAAAGAAAAGGGGAAATCAAAAAACCCCATAGACCAAAGCTACAGAGAAAGCATTTTTCTTTTTTGATTAAAGAAAAAGGGCAATTGAGGGAAAAGGTAGACGGAGACTTTCTGTGACTTGTCGGGGTGGTTGCCCACAAAAAGGTACATTCAATTTTAAAATAACTATAACAAATCCTGAAAAGAAGCAGAGATACAGAATTTTTTTCCTTTTTTCCTTTTTTATTTATTAATATTCAAACAATTCCATGTTTTCTCTTTTATGATGCCTTTCCTCTTCTCCGTTTCTTTCATTTCTCTTCTTCAAAAGGGTCTTTCACTTACTCACAGTAGTTGAGATTTCAGATTTTCCTTTTCTATTTTGTTCAACCAAAGTGAGGAACCAACAGGGCTTTGTCAATCTTAAAGAAGCTTCTCTTCCTATTACCATTGATTCTCTTTCTCTTCTTCTTTTATTGTGATTTAATCCCATGCTTTTTGTGTATTCATCTTGAGTTTCTAATTTTTTCTGATGTCTATACCGTTAGAACATGATTACATAGGCTTAACAGAGTCTGTTCCTTCTCTGGAAAACTCTGAAAAGTCTTCTGATAAACGCAACAGTGCTGGTTTGAACCTTAAGGCTACTGAACTGAGGTTGGGTCTGCCGGGATCGGAGTCACCGGGAAGGGATGATGGGTTTGAGGATAAGAATGGGTTCCTTCACAAGAGCTCTGTTTCTGGGGCTAAGAGGGGTTTCTCCATAGCCATTGATAGAGCTTCTGCCAAGTGGGTTCTACCAGCTTCTGCCGGATCTGAGGCAGACTCCTCCACAAATGGGGGTTTGTTTTCTCCTAGAGGTGTTAATGAGAATAAGACTCAACCACCTGCTTCCGCTGTCTCCGGTGTCAAAGACGGTATTTCTCCGTCAGCCAAGCCACTTCATGAGGAAAAGCCTCAGCTTTCTCCCCCTGCAGCTAAGTATGTGTTTTTCCTTTGATTTTTCCATCTGAATAAATTGTGCTTTGGAACTCTGCTTGTTCAACATCAGCTTTTTCCTTTCCTTCTTCTTGACTTTGTTTTTCTTATCTTCTTCTCCTATTTGAACGAAAAATTTGGGCTGTGATTCATTCATGTAGTTTTAATCGTTCGTAGAAAAACCTTGACCCTTTTGATAGACAACGTTATTTTCTGTCACTATAAGCTGGAAGATCCATAATTTTGGTCTTTACTTTTTCCCTTTGTATTACAAACTATGTTGGCTGCATATAATTCTTTCGGTTCTGGTCGGTCCGAGCTTGTTAACCTTCTCTGCGAGGTCTCGTCTCTCTGACCCTTCTTCCATCACCTGTAAGATTGTGTAGGAGTGAATTTGAACAGATATCTGTCAAGCTTACTAGCTTGGCTGTTTTCTTAGATTTGGAATGTTTTTACAGGCAAATCTTTTTTTAAATTTTCCACCTTGATATCAGTTATTTGTGTGGATTTCATGTTTCTATCGAAGTTCCTAATTCCACAAAAATCTCAAAGTGCTTTATCATTTTTGTTACAGGGCACAAGTTGTAGGATGGCCACCCATTCGTTCTTTCCGTAAGAATTCAATGGCAACACAGCCCCCTAAAAATACAGATGATGCGGATGGTAAGTTGGGATCAGGCTGCCTTTATGTCAAGGTAAGTATGGATGGCGCACCGTACCTCAGGAAGGTTGATCTGAAAACCTATGTAAGCTATGTGGACCTCTCATCAGCCCTGGAGAAAATGTTCAGCAGCTTCACAATTGGTAGTCTTGCAGATCTTGGCTGATTTAGTGTCTTGTGTAACTCCTGCCCGTGTCCTGTATTGTAATCATATTGCATCACTTCCATGGTTCAGCCACAAACACCTTCAGGAATGTAAATGTTTAGGTTTGGCTCGTAAGAAACTCATGTGGCAAAAGTATCTAAAGACAAAATAAATGGCGATAAGGTTATCAATGAAATCAAGAAGACTTGCATGGAGTTAGTAGCTTCTCCGGTGTTATGTGTCAAATATGTGTAATTATATCATGGTCAAGACATTCTTATTTCTTCAAAATTATTGCTCATTCACGATACTTAGCATGTCTTATTCTTTACTTTAACTAGCAGCATAAGTTTCTGTCTAATAAAAGCCATTGCACTAGTACTTGAAGGTTCAGAACCGGGCACCTAGTGCATGTGGATTAGTTTATGTCGCTCAGTTACTCTCAGTTTTTGGTATTGTAGCAAGGTTTTTGTTCAAGTAGAAGTGATTTCCCTTCAACCTGTCAGGTCACTATGGCTCTAATGGAGTTCCAAACCGGGATGCATTAAACGAGAGTAGGTTGATGGATCTGCTCCATGGCTCTGAATATGTACTCACCTACGAAGATAAGGATGGTGACTGGATGCTCGTTGGTGATGTTCCATGGGAGTAAGTTCATTACTCATTCATTTGTGTTTCACTAAGGAATAGCTCAACTGCACTCTTAACTAGGTTTGAACTGGGATGGCTCTAATCCAATTCATCACTTTGGTTCAACTATTAACCTGAACAAAATTGCTATCTTTTCTTTCTTTCCTTCATTCATGTCTTGGGTGATTAGAGGAATTTTCTGACTGATCTATTAATCTGTAACATTCAAGAAATTCTTATTGTATGACTGCTAATAAAAGAAGTTTTCATCATATTTATCTTCTTTCTTTTTACACAATAGGATGTTCACTGAATCTTGCACAAGGATGAGGATCATGAAGAGTTCAGAGGCTATTGGGTTAGGTATGCTATGCTATGGACTTCAATAATTTCTTAATTTTGTTTTTCGTTATTACTAAATTTATTAGACAAGTTATAGTGGGATTTCATCTTCATGATTATAAAGCATTTGAGAATATGGGTCTTTGTTCAGTGCTCTCTTAGTTACCATCATTATCTCTACACTTGAAAAGCCTTTTCTTTTTCTCAGAATTACTTCGCATCTTTCATTTTCATAAAGTTTGACCCCCCACCCACCCCTCAAAGAAAAAGATGCAACAATTAAAAACATAGCAGTTTAAATTCCATTAGGATCGGATCTTTACACAAAGTTCATCATATTATTATTATTATTATTATTCTCCTGTGACCCCATCATTAGAAGCTTGGCCTTTTCTCTTGCAGCTCCAAGGGCCATGGAGAAATGCAAAAACCGTAATTAGCTGGCAAACTCTTTTGCTATATCAATGCATCAATCACGCACGTTAGAGCAAATGTCGTTTGGAGATAACACATAATATGGCTCCTGGAAGCATAGATTGAGCGAGAGAATCTATACCGAGTATTGTGGTGGTGTTCTTTGTGCACGAGTTATAAAATATTGGAGAGTTGATGTATCAAGATAACTTGTGTTGGAAAAGATGAATTTCAATAGGACGTTCATAGTTTTTTCTTAGTTTGCCCCCTTCCCCTATTTTCTTTGTGATTTTACTTGGATTGTTGTTGCTACACTTCTACTTTGTATTATTGTAAATGGTTTGTTTGCTATTGCCAATTGCTGTATCCCTTACCCTTCACACCTGTCTGGCTTCCTCCTCCCAAGAGAGTTTAATTAAACCGATAGCTTTTGTATTTGTATC

mRNA sequence

ATGTCTATACCGTTAGAACATGATTACATAGGCTTAACAGAGTCTGTTCCTTCTCTGGAAAACTCTGAAAAGTCTTCTGATAAACGCAACAGTGCTGGTTTGAACCTTAAGGCTACTGAACTGAGGTTGGGTCTGCCGGGATCGGAGTCACCGGGAAGGGATGATGGGTTTGAGGATAAGAATGGGTTCCTTCACAAGAGCTCTGTTTCTGGGGCTAAGAGGGGTTTCTCCATAGCCATTGATAGAGCTTCTGCCAAGTGGGTTCTACCAGCTTCTGCCGGATCTGAGGCAGACTCCTCCACAAATGGGGGTTTGTTTTCTCCTAGAGGTGTTAATGAGAATAAGACTCAACCACCTGCTTCCGCTGTCTCCGGTGTCAAAGACGGTATTTCTCCGTCAGCCAAGCCACTTCATGAGGAAAAGCCTCAGCTTTCTCCCCCTGCAGCTAAGGCACAAGTTGTAGGATGGCCACCCATTCGTTCTTTCCGTAAGAATTCAATGGCAACACAGCCCCCTAAAAATACAGATGATGCGGATGGTAAGTTGGGATCAGGCTGCCTTTATGTCAAGGTAAGTATGGATGGCGCACCGTACCTCAGGAAGGTTGATCTGAAAACCTATGTAAGCTATGTGGACCTCTCATCAGCCCTGGAGAAAATGTTCAGCAGCTTCACAATTGGTCACTATGGCTCTAATGGAGTTCCAAACCGGGATGCATTAAACGAGAGTAGGTTGATGGATCTGCTCCATGGCTCTGAATATGTACTCACCTACGAAGATAAGGATGGTGACTGGATGCTCGTTGGTGATGTTCCATGGGAGATGTTCACTGAATCTTGCACAAGGATGAGGATCATGAAGAGTTCAGAGGCTATTGGGTTAGCTCCAAGGGCCATGGAGAAATGCAAAAACCGTAATTAG

Coding sequence (CDS)

ATGTCTATACCGTTAGAACATGATTACATAGGCTTAACAGAGTCTGTTCCTTCTCTGGAAAACTCTGAAAAGTCTTCTGATAAACGCAACAGTGCTGGTTTGAACCTTAAGGCTACTGAACTGAGGTTGGGTCTGCCGGGATCGGAGTCACCGGGAAGGGATGATGGGTTTGAGGATAAGAATGGGTTCCTTCACAAGAGCTCTGTTTCTGGGGCTAAGAGGGGTTTCTCCATAGCCATTGATAGAGCTTCTGCCAAGTGGGTTCTACCAGCTTCTGCCGGATCTGAGGCAGACTCCTCCACAAATGGGGGTTTGTTTTCTCCTAGAGGTGTTAATGAGAATAAGACTCAACCACCTGCTTCCGCTGTCTCCGGTGTCAAAGACGGTATTTCTCCGTCAGCCAAGCCACTTCATGAGGAAAAGCCTCAGCTTTCTCCCCCTGCAGCTAAGGCACAAGTTGTAGGATGGCCACCCATTCGTTCTTTCCGTAAGAATTCAATGGCAACACAGCCCCCTAAAAATACAGATGATGCGGATGGTAAGTTGGGATCAGGCTGCCTTTATGTCAAGGTAAGTATGGATGGCGCACCGTACCTCAGGAAGGTTGATCTGAAAACCTATGTAAGCTATGTGGACCTCTCATCAGCCCTGGAGAAAATGTTCAGCAGCTTCACAATTGGTCACTATGGCTCTAATGGAGTTCCAAACCGGGATGCATTAAACGAGAGTAGGTTGATGGATCTGCTCCATGGCTCTGAATATGTACTCACCTACGAAGATAAGGATGGTGACTGGATGCTCGTTGGTGATGTTCCATGGGAGATGTTCACTGAATCTTGCACAAGGATGAGGATCATGAAGAGTTCAGAGGCTATTGGGTTAGCTCCAAGGGCCATGGAGAAATGCAAAAACCGTAATTAG

Protein sequence

MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDKNGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPASAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDADGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAMEKCKNRN

Homology

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BLAST of CsaV3_1G021860 vs. NCBI nr
Match: XP_004150556.1 (PREDICTED: auxin-responsive protein IAA27 [Cucumis sativus] >KGN65095.1 hypothetical protein Csa_1G207820 [Cucumis sativus])

HSP 1 Score: 613.2 bits (1580), Expect = 4.7e-172
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK 60
           MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK
Sbjct: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK 60

Query: 61  NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120
           NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA
Sbjct: 61  NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120

Query: 121 SAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDADG 180
           SAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDADG
Sbjct: 121 SAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDADG 180

Query: 181 KLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDAL 240
           KLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDAL
Sbjct: 181 KLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDAL 240

Query: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300
           NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME
Sbjct: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300

Query: 301 KCKNRN 307
           KCKNRN
Sbjct: 301 KCKNRN 306

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BLAST of CsaV3_1G021860 vs. NCBI nr
Match: XP_008462746.1 (PREDICTED: auxin-responsive protein IAA27 [Cucumis melo])

HSP 1 Score: 593.6 bits (1529), Expect = 3.9e-166
Identity = 299/307 (97.39%), Postives = 302/307 (98.37%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK 60
           MSIPLEHDYIGLTESVPSLE+SEKSSDKRN+AGLNLKATELRLGLPGSESPGRDDGFED 
Sbjct: 1   MSIPLEHDYIGLTESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPGRDDGFEDN 60

Query: 61  NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120
           NGFLHKS VSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA
Sbjct: 61  NGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120

Query: 121 SAVSGVKDGISPSAKP-LHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDAD 180
           SAV GVKDGISPSAKP L+EEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDAD
Sbjct: 121 SAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDAD 180

Query: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDA 240
           GKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGH GSNGVPNRDA
Sbjct: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRDA 240

Query: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300
           LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300

Query: 301 EKCKNRN 307
           EKCKNRN
Sbjct: 301 EKCKNRN 307

[Close]

BLAST of CsaV3_1G021860 vs. NCBI nr
Match: XP_022987799.1 (auxin-responsive protein IAA27-like [Cucurbita maxima] >XP_022987802.1 auxin-responsive protein IAA27-like [Cucurbita maxima])

HSP 1 Score: 558.5 bits (1438), Expect = 1.4e-155
Identity = 277/306 (90.52%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK 60
           MS PLEHDYIGLTES+PS E SE SSD+ NSAGLNLKATELRLGLPGSESP R DG +D 
Sbjct: 1   MSTPLEHDYIGLTESIPSQETSETSSDRPNSAGLNLKATELRLGLPGSESPVRHDGVDDN 60

Query: 61  NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120
           NG+ HK+S+SGAKRGFS+AIDRASAKWVLP SAGSEADS+ NGGLFSPRGVNENKTQPP 
Sbjct: 61  NGYPHKTSISGAKRGFSVAIDRASAKWVLPTSAGSEADSTKNGGLFSPRGVNENKTQPPV 120

Query: 121 SAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDADG 180
           SAVSGVKDGISPSAKPLHEEKPQLS PAAKAQVVGWPPIRSFRKNSMATQPPK T+DA+G
Sbjct: 121 SAVSGVKDGISPSAKPLHEEKPQLSAPAAKAQVVGWPPIRSFRKNSMATQPPKTTEDAEG 180

Query: 181 KLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDAL 240
           K GSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGH GSNG PNRDAL
Sbjct: 181 KSGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGFPNRDAL 240

Query: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300
           NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME
Sbjct: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300

Query: 301 KCKNRN 307
           KC+NRN
Sbjct: 301 KCRNRN 306

[Close]

BLAST of CsaV3_1G021860 vs. NCBI nr
Match: XP_022961331.1 (auxin-responsive protein IAA27-like [Cucurbita moschata])

HSP 1 Score: 553.5 bits (1425), Expect = 4.5e-154
Identity = 276/306 (90.20%), Postives = 285/306 (93.14%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK 60
           MS PLEHDYIGLTES+PSLE SE SSD  NSAGLNLKATELRLGLPGSESP R DG +D 
Sbjct: 1   MSTPLEHDYIGLTESIPSLETSETSSDGPNSAGLNLKATELRLGLPGSESPERHDGLDDN 60

Query: 61  NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120
           NG+ HK+S+SGAKRGFS+AIDRASAKWVLP SAGSEADS  NGGLFSPRGVNENKTQPP 
Sbjct: 61  NGYPHKTSISGAKRGFSVAIDRASAKWVLPTSAGSEADSPKNGGLFSPRGVNENKTQPPV 120

Query: 121 SAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDADG 180
           SAVSGVKDGISPSAKPLHEEKPQLS PAAKAQVVGWPPIRSFRKNSMATQ PK T+DA+G
Sbjct: 121 SAVSGVKDGISPSAKPLHEEKPQLSAPAAKAQVVGWPPIRSFRKNSMATQSPKTTEDAEG 180

Query: 181 KLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDAL 240
           K GSGCLYVKVSMDGAPYLRKVDLKTY SYVDLSSALEKMFSSFTIGH GSNG PNRDAL
Sbjct: 181 KSGSGCLYVKVSMDGAPYLRKVDLKTYGSYVDLSSALEKMFSSFTIGHCGSNGFPNRDAL 240

Query: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300
           NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME
Sbjct: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300

Query: 301 KCKNRN 307
           KC+NRN
Sbjct: 301 KCRNRN 306

[Close]

BLAST of CsaV3_1G021860 vs. NCBI nr
Match: XP_022144958.1 (auxin-responsive protein IAA27-like [Momordica charantia] >XP_022144959.1 auxin-responsive protein IAA27-like [Momordica charantia])

HSP 1 Score: 548.5 bits (1412), Expect = 1.4e-152
Identity = 275/306 (89.87%), Postives = 287/306 (93.79%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK 60
           MS+PLEHDYIGLTESVP LE+SEKSSD+RN+ GLNLKATELRLGLPGSESP RDDG ED 
Sbjct: 1   MSMPLEHDYIGLTESVPPLESSEKSSDRRNNGGLNLKATELRLGLPGSESPRRDDGLEDN 60

Query: 61  NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120
           NG+  KSSVSGAKRGFS+AIDRASAKWVLP+SAGSEADSS  GGLFSPR    NKTQP +
Sbjct: 61  NGYPLKSSVSGAKRGFSVAIDRASAKWVLPSSAGSEADSSKPGGLFSPRVNENNKTQPSS 120

Query: 121 SAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDADG 180
           +AVSGVKDGISPSAKPLHEEKPQLS PAAKAQVVGWPPIRSFRKNSMATQPPK T+DADG
Sbjct: 121 TAVSGVKDGISPSAKPLHEEKPQLSAPAAKAQVVGWPPIRSFRKNSMATQPPKTTEDADG 180

Query: 181 KLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDAL 240
           KLGSGCLYVKVSMDGAPYLRKVDLKTY SYV+LSSALEKMFSSFT+GH GSNGVPNRDAL
Sbjct: 181 KLGSGCLYVKVSMDGAPYLRKVDLKTYGSYVELSSALEKMFSSFTLGHCGSNGVPNRDAL 240

Query: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300
           NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 
Sbjct: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAMA 300

Query: 301 KCKNRN 307
           KCKNRN
Sbjct: 301 KCKNRN 306

[Close]

BLAST of CsaV3_1G021860 vs. TAIR10
Match: AT4G29080.1 (phytochrome-associated protein 2)

HSP 1 Score: 314.3 bits (804), Expect = 8.2e-86
Identity = 192/323 (59.44%), Postives = 225/323 (69.66%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLE---NSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGF 60
           +S+  EHDYIGL+E  P++E    S+K+  + N+ GLN KATELRLGLPGSESP R D  
Sbjct: 3   VSVAAEHDYIGLSE-FPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPERVD-- 62

Query: 61  EDKNGFLHKSS--VSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENK 120
             +   L+KSS  VSGAKR FS AI+  S KWV   S GS   +   G    PR      
Sbjct: 63  -SRFLALNKSSCPVSGAKRVFSDAIN-DSNKWVF--SPGSTTATGDVGSGSGPR------ 122

Query: 121 TQPPASAVSGVKDGISPS----AKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMA--- 180
                   S VKDG S +    A P+ E+K   + PA+KAQVVGWPPIRSFRKNSMA   
Sbjct: 123 -------TSVVKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQ 182

Query: 181 TQPPKN---TDDADGKLG--SGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSS 240
           +Q P N   T++A+ K G    CLYVKVSM+GAPYLRK+DLKTY SY++LSSALEKMFS 
Sbjct: 183 SQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSC 242

Query: 241 FTIGHYGSNGVPNRDALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRM 300
           FTIG +GS+G   RD LNESRL DLL GSEYV+TYEDKD DWMLVGDVPWEMF  SC ++
Sbjct: 243 FTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKL 302

Query: 301 RIMKSSEAIGLAPRAMEKCKNRN 307
           RIMKSSEAIGLAPR MEKC++RN
Sbjct: 303 RIMKSSEAIGLAPRVMEKCRSRN 305

[Close]

BLAST of CsaV3_1G021860 vs. TAIR10
Match: AT2G22670.4 (indoleacetic acid-induced protein 8)

HSP 1 Score: 265.0 bits (676), Expect = 5.7e-71
Identity = 160/326 (49.08%), Postives = 199/326 (61.04%), Query Frame = 0


Query: 6   EHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGF-------- 65
           E +Y+GL++   S  +S    +    + LN KATELRLGLP S+SP R+  F        
Sbjct: 38  ERNYLGLSDC--SSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFGLLSPRTP 97

Query: 66  ----------EDKNGFL---HKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGG 125
                        NG     HK+ VSG KRGF+   D  S         G +      GG
Sbjct: 98  DEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFS---------GVKGSVRPGGG 157

Query: 126 LFSPRGVNENKTQPPASAVSGVKDGISPSAKPLHEEKPQL-----SPPAAKAQVVGWPPI 185
           +        N    P      VKD     +K + EE+        + PAAKAQVVGWPPI
Sbjct: 158 I--------NMMLSPK-----VKD----VSKSIQEERSHAKGGLNNAPAAKAQVVGWPPI 217

Query: 186 RSFRKNSMATQPPKNTDDADGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEK 245
           RS+RKN+MA+   KNTD+ DGK G G L+VKVSMDGAPYLRKVDL+TY SY  LSSALEK
Sbjct: 218 RSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEK 277

Query: 246 MFSSFTIGHYGSNGVPNRDALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTES 305
           MFS FT+G  G +G   R+ ++E +L DLLHGSE+VLTYEDKDGDWMLVGDVPWE+FTE+
Sbjct: 278 MFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTET 335

[Close]

BLAST of CsaV3_1G021860 vs. TAIR10
Match: AT5G65670.1 (indole-3-acetic acid inducible 9)

HSP 1 Score: 252.7 bits (644), Expect = 2.9e-67
Identity = 155/327 (47.40%), Postives = 200/327 (61.16%), Query Frame = 0


Query: 6   EHDYIGLTE--SVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFE----- 65
           EH+Y+GL++  SV S   S  + D  + A ++LKATEL LGLPGS+SP RD         
Sbjct: 33  EHNYLGLSDCSSVGSSTLSPLAED--DKATISLKATELTLGLPGSQSPARDTELNLLSPA 92

Query: 66  --DKNGFL-------------HKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNG 125
             D+  F               K++ SG KRGFS  +D+            +EA SS   
Sbjct: 93  KLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQF-----------AEAKSSVY- 152

Query: 126 GLFSPRGVNENKTQPPASAVSGVKDGISPSAKPLHEE---KPQLSPPAAKAQVVGWPPIR 185
                    +N   P A+A   V     P   P  +             KAQ+VGWPP+R
Sbjct: 153 -------TEKNWMFPEAAATQSVTKKDVPQNIPKGQSXXXXXXXXXXXXKAQIVGWPPVR 212

Query: 186 SFRKNSMATQPPKNTDDADGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKM 245
           S+RKN++AT   KN+D+ DG+ GSG L+VKVSMDGAPYLRKVDL++Y +Y +LSSALEKM
Sbjct: 213 SYRKNTLAT-TCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKM 272

Query: 246 FSSFTIGHYGSNGVPNRDALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESC 305
           F++FT+G  GSNG   +D L+E++L DLL+G +YVLTYEDKDGDWMLVGDVPWEMF + C
Sbjct: 273 FTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVC 332

[Close]

BLAST of CsaV3_1G021860 vs. TAIR10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16)

HSP 1 Score: 236.1 bits (601), Expect = 2.9e-62
Identity = 143/287 (49.83%), Postives = 167/287 (58.19%), Query Frame = 0


Query: 34  LNLKATELRLGLPGSESPGRDDGFEDKNGFLHKSSVSGAKRGFSIAIDRASAKWVLPASA 93
           +N +ATELRLGLPG    G   G   KN           KRGFS  +D       L  + 
Sbjct: 2   INFEATELRLGLPGGNHGGEMAG---KN---------NGKRGFSETVD-------LKLNL 61

Query: 94  GSEADSSTNGGLFSPRGVNENKTQPPASAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQV 153
            S A  S                                S   L   K ++  P AKAQV
Sbjct: 62  SSTAMDSV-------------------------------SKVDLENMKEKVVKPPAKAQV 121

Query: 154 VGWPPIRSFRKNSMATQPPKNTDDADGK-----------LGSGC---LYVKVSMDGAPYL 213
           VGWPP+RSFRKN M+ Q P   D  +G              S C    YVKVSMDGAPYL
Sbjct: 122 VGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSXXXXXXXSACATVAYVKVSMDGAPYL 181

Query: 214 RKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDALNESRLMDLLHGSEYVLTYE 273
           RK+DLK Y +Y DLS+AL KMFSSFTIG+YG  G+  +D +NES+L+DLL+GS+YV TYE
Sbjct: 182 RKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGSDYVPTYE 236

Query: 274 DKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAMEKCKNRN 307
           DKDGDWMLVGDVPWEMF +SC R+RIMK SEAIGLAPRA+EKCKNR+
Sbjct: 242 DKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS 236

[Close]

BLAST of CsaV3_1G021860 vs. TAIR10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14)

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-61
Identity = 143/277 (51.62%), Postives = 167/277 (60.29%), Query Frame = 0


Query: 34  LNLKATELRLGLPGS----ESPGRDDGFEDKNGFLHKSSVSGAKRGFSIAIDRASAKWVL 93
           +NLK TEL LGLPG     ESP              KS V G KRGFS  +D    K  L
Sbjct: 1   MNLKETELCLGLPGGTETVESPA-------------KSGV-GNKRGFSETVD---LKLNL 60

Query: 94  PASAGSEADSSTNGGLFSPRGVNENKTQPPASAVSGVKDGISPSAKPLHEEKPQLSPPAA 153
            ++     D +TNG                           +P  K   ++    S P A
Sbjct: 61  QSNKQGHVDLNTNG---------------------------APKEKTFLKDP---SKPPA 120

Query: 154 KAQVVGWPPIRSFRKNSMATQPPKNTDDADGKLGSGCLYVKVSMDGAPYLRKVDLKTYVS 213
           KAQVVGWPP+R++RKN MA Q     ++A    G    +VKVSMDGAPYLRKVDLK Y S
Sbjct: 121 KAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTS 180

Query: 214 YVDLSSALEKMFSSFTIGHYGSNGVPNRDALNESRLMDLLHGSEYVLTYEDKDGDWMLVG 273
           Y DLS AL KMFSSFT+G YG+ G+   D +NES++MDLL+ SEYV +YEDKDGDWMLVG
Sbjct: 181 YKDLSDALAKMFSSFTMGSYGAQGM--IDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVG 228

Query: 274 DVPWEMFTESCTRMRIMKSSEAIGLAPRAMEKCKNRN 307
           DVPW MF ESC R+RIMK SEAIGLAPRAMEK KNR+
Sbjct: 241 DVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228

[Close]

BLAST of CsaV3_1G021860 vs. Swiss-Prot
Match: sp|Q9ZSY8|IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.5e-84
Identity = 192/323 (59.44%), Postives = 225/323 (69.66%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLE---NSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGF 60
           +S+  EHDYIGL+E  P++E    S+K+  + N+ GLN KATELRLGLPGSESP R D  
Sbjct: 3   VSVAAEHDYIGLSE-FPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPERVD-- 62

Query: 61  EDKNGFLHKSS--VSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENK 120
             +   L+KSS  VSGAKR FS AI+  S KWV   S GS   +   G    PR      
Sbjct: 63  -SRFLALNKSSCPVSGAKRVFSDAIN-DSNKWVF--SPGSTTATGDVGSGSGPR------ 122

Query: 121 TQPPASAVSGVKDGISPS----AKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMA--- 180
                   S VKDG S +    A P+ E+K   + PA+KAQVVGWPPIRSFRKNSMA   
Sbjct: 123 -------TSVVKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQ 182

Query: 181 TQPPKN---TDDADGKLG--SGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSS 240
           +Q P N   T++A+ K G    CLYVKVSM+GAPYLRK+DLKTY SY++LSSALEKMFS 
Sbjct: 183 SQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSC 242

Query: 241 FTIGHYGSNGVPNRDALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRM 300
           FTIG +GS+G   RD LNESRL DLL GSEYV+TYEDKD DWMLVGDVPWEMF  SC ++
Sbjct: 243 FTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKL 302

Query: 301 RIMKSSEAIGLAPRAMEKCKNRN 307
           RIMKSSEAIGLAPR MEKC++RN
Sbjct: 303 RIMKSSEAIGLAPRVMEKCRSRN 305

[Close]

BLAST of CsaV3_1G021860 vs. Swiss-Prot
Match: sp|Q38826|IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-69
Identity = 160/326 (49.08%), Postives = 199/326 (61.04%), Query Frame = 0


Query: 6   EHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGF-------- 65
           E +Y+GL++   S  +S    +    + LN KATELRLGLP S+SP R+  F        
Sbjct: 21  ERNYLGLSDC--SSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFGLLSPRTP 80

Query: 66  ----------EDKNGFL---HKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGG 125
                        NG     HK+ VSG KRGF+   D  S         G +      GG
Sbjct: 81  DEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFS---------GVKGSVRPGGG 140

Query: 126 LFSPRGVNENKTQPPASAVSGVKDGISPSAKPLHEEKPQL-----SPPAAKAQVVGWPPI 185
           +        N    P      VKD     +K + EE+        + PAAKAQVVGWPPI
Sbjct: 141 I--------NMMLSPK-----VKD----VSKSIQEERSHAKGGLNNAPAAKAQVVGWPPI 200

Query: 186 RSFRKNSMATQPPKNTDDADGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEK 245
           RS+RKN+MA+   KNTD+ DGK G G L+VKVSMDGAPYLRKVDL+TY SY  LSSALEK
Sbjct: 201 RSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEK 260

Query: 246 MFSSFTIGHYGSNGVPNRDALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTES 305
           MFS FT+G  G +G   R+ ++E +L DLLHGSE+VLTYEDKDGDWMLVGDVPWE+FTE+
Sbjct: 261 MFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTET 318

[Close]

BLAST of CsaV3_1G021860 vs. Swiss-Prot
Match: sp|Q38827|IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 5.3e-66
Identity = 155/327 (47.40%), Postives = 200/327 (61.16%), Query Frame = 0


Query: 6   EHDYIGLTE--SVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFE----- 65
           EH+Y+GL++  SV S   S  + D  + A ++LKATEL LGLPGS+SP RD         
Sbjct: 33  EHNYLGLSDCSSVGSSTLSPLAED--DKATISLKATELTLGLPGSQSPARDTELNLLSPA 92

Query: 66  --DKNGFL-------------HKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNG 125
             D+  F               K++ SG KRGFS  +D+            +EA SS   
Sbjct: 93  KLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQF-----------AEAKSSVY- 152

Query: 126 GLFSPRGVNENKTQPPASAVSGVKDGISPSAKPLHEE---KPQLSPPAAKAQVVGWPPIR 185
                    +N   P A+A   V     P   P  +             KAQ+VGWPP+R
Sbjct: 153 -------TEKNWMFPEAAATQSVTKKDVPQNIPKGQSXXXXXXXXXXXXKAQIVGWPPVR 212

Query: 186 SFRKNSMATQPPKNTDDADGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKM 245
           S+RKN++AT   KN+D+ DG+ GSG L+VKVSMDGAPYLRKVDL++Y +Y +LSSALEKM
Sbjct: 213 SYRKNTLAT-TCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKM 272

Query: 246 FSSFTIGHYGSNGVPNRDALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESC 305
           F++FT+G  GSNG   +D L+E++L DLL+G +YVLTYEDKDGDWMLVGDVPWEMF + C
Sbjct: 273 FTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVC 332

[Close]

BLAST of CsaV3_1G021860 vs. Swiss-Prot
Match: sp|O24407|IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.1e-61
Identity = 143/287 (49.83%), Postives = 167/287 (58.19%), Query Frame = 0


Query: 34  LNLKATELRLGLPGSESPGRDDGFEDKNGFLHKSSVSGAKRGFSIAIDRASAKWVLPASA 93
           +N +ATELRLGLPG    G   G   KN           KRGFS  +D       L  + 
Sbjct: 2   INFEATELRLGLPGGNHGGEMAG---KN---------NGKRGFSETVD-------LKLNL 61

Query: 94  GSEADSSTNGGLFSPRGVNENKTQPPASAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQV 153
            S A  S                                S   L   K ++  P AKAQV
Sbjct: 62  SSTAMDSV-------------------------------SKVDLENMKEKVVKPPAKAQV 121

Query: 154 VGWPPIRSFRKNSMATQPPKNTDDADGK-----------LGSGC---LYVKVSMDGAPYL 213
           VGWPP+RSFRKN M+ Q P   D  +G              S C    YVKVSMDGAPYL
Sbjct: 122 VGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSXXXXXXXSACATVAYVKVSMDGAPYL 181

Query: 214 RKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDALNESRLMDLLHGSEYVLTYE 273
           RK+DLK Y +Y DLS+AL KMFSSFTIG+YG  G+  +D +NES+L+DLL+GS+YV TYE
Sbjct: 182 RKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGSDYVPTYE 236

Query: 274 DKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAMEKCKNRN 307
           DKDGDWMLVGDVPWEMF +SC R+RIMK SEAIGLAPRA+EKCKNR+
Sbjct: 242 DKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS 236

[Close]

BLAST of CsaV3_1G021860 vs. Swiss-Prot
Match: sp|P0C132|IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.1e-61
Identity = 120/167 (71.86%), Postives = 136/167 (81.44%), Query Frame = 0


Query: 146 PPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDADG---KLGSG---CLYVKVSMDGAPYL 205
           P A KAQVVGWPP+RS+RKN +A Q  K  D ADG   K G+G     +VKVSMDGAPYL
Sbjct: 114 PRAPKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYL 173

Query: 206 RKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDALNESRLMDLLHGSEYVLTYE 265
           RKVDLK Y SY++LS ALEKMFSSFTIG+ GS+GV   + +NES++ DLL+GSEYV TYE
Sbjct: 174 RKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGV---NGMNESKIADLLNGSEYVPTYE 233

Query: 266 DKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAMEKCKNRN 307
           DKDGDWMLVGDVPWEMF ESC R+RIMK SEAIGLAPRAMEKCKNR+
Sbjct: 234 DKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277

[Close]

BLAST of CsaV3_1G021860 vs. TrEMBL
Match: tr|A0A0A0LT68|A0A0A0LT68_CUCSA (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G207820 PE=3 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 3.1e-172
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK 60
           MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK
Sbjct: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK 60

Query: 61  NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120
           NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA
Sbjct: 61  NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120

Query: 121 SAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDADG 180
           SAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDADG
Sbjct: 121 SAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDADG 180

Query: 181 KLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDAL 240
           KLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDAL
Sbjct: 181 KLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDAL 240

Query: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300
           NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME
Sbjct: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300

Query: 301 KCKNRN 307
           KCKNRN
Sbjct: 301 KCKNRN 306

[Close]

BLAST of CsaV3_1G021860 vs. TrEMBL
Match: tr|A0A1S3CHQ1|A0A1S3CHQ1_CUCME (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501033 PE=3 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 2.6e-166
Identity = 299/307 (97.39%), Postives = 302/307 (98.37%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK 60
           MSIPLEHDYIGLTESVPSLE+SEKSSDKRN+AGLNLKATELRLGLPGSESPGRDDGFED 
Sbjct: 1   MSIPLEHDYIGLTESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPGRDDGFEDN 60

Query: 61  NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120
           NGFLHKS VSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA
Sbjct: 61  NGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120

Query: 121 SAVSGVKDGISPSAKP-LHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDAD 180
           SAV GVKDGISPSAKP L+EEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDAD
Sbjct: 121 SAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDAD 180

Query: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDA 240
           GKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGH GSNGVPNRDA
Sbjct: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRDA 240

Query: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300
           LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300

Query: 301 EKCKNRN 307
           EKCKNRN
Sbjct: 301 EKCKNRN 307

[Close]

BLAST of CsaV3_1G021860 vs. TrEMBL
Match: tr|A0A2I4E6L1|A0A2I4E6L1_9ROSI (Auxin-responsive protein OS=Juglans regia OX=51240 GN=LOC108986756 PE=3 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 7.6e-118
Identity = 234/325 (72.00%), Postives = 255/325 (78.46%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGF--E 60
           MS+PLEHDYIGL+E+ PS+E SE+ S+ R S GLNLKATELRLGLPGS+SP RD G   E
Sbjct: 1   MSVPLEHDYIGLSEAPPSMEGSERPSE-RTSGGLNLKATELRLGLPGSDSPERDKGMVAE 60

Query: 61  DKNGF---LHKS--SVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVN- 120
           DK G+   + KS   VSGAKRGFS AID  S KWV   S GSEA+S   G LFSPRGVN 
Sbjct: 61  DKAGYPLGVLKSLLVVSGAKRGFSDAIDGGSGKWVFSGSGGSEAESGKGGNLFSPRGVNG 120

Query: 121 ----------ENKTQPPASAVSGVKDGISP-SAKPLHEEKPQLSPPAAKAQVVGWPPIRS 180
                     E   Q        +KDG+ P S KP  E+KPQLS PAAKAQVVGWPPIRS
Sbjct: 121 AGKGGLVGGSEGANQNTGLGGPILKDGVVPQSPKPSQEKKPQLSAPAAKAQVVGWPPIRS 180

Query: 181 FRKNSMATQPPKNTDDADGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMF 240
           +RKNSMA+ PPKN DD +GKLGSGCLYVKVSMDGAPYLRKVDLKTY SY +LSSALEKMF
Sbjct: 181 YRKNSMASHPPKNDDDTEGKLGSGCLYVKVSMDGAPYLRKVDLKTYGSYRELSSALEKMF 240

Query: 241 SSFTIGHYGSNGVPNRDALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCT 300
           S FTIG  GS+GVP+RD L+ESRLMDLLHGSEYVLTYEDKD DWMLVGDVPWEMFT+SC 
Sbjct: 241 SCFTIGQCGSHGVPSRDGLSESRLMDLLHGSEYVLTYEDKDSDWMLVGDVPWEMFTDSCK 300

Query: 301 RMRIMKSSEAIGLAPRAMEKCKNRN 307
           RMRIMKSSEAIGLAPRAMEKCKNRN
Sbjct: 301 RMRIMKSSEAIGLAPRAMEKCKNRN 324

[Close]

BLAST of CsaV3_1G021860 vs. TrEMBL
Match: tr|A0A2P6RJQ1|A0A2P6RJQ1_ROSCH (Auxin-responsive protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0091261 PE=3 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 2.4e-116
Identity = 227/318 (71.38%), Postives = 253/318 (79.56%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDG-FED 60
           MS+ LEHDYIGL+ESVPS+E S++S+     A LNLKATELRLGLPGSESP RD G  ED
Sbjct: 1   MSMSLEHDYIGLSESVPSMEASDRSN---KGAALNLKATELRLGLPGSESPERDSGAVED 60

Query: 61  KNGF---LHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVN---- 120
           K GF   + K SVSGAKR FS AID AS KWV   S GSEAD    G L SPRGVN    
Sbjct: 61  KTGFSLPVPKPSVSGAKRVFSDAIDGASGKWVFSGSGGSEADLGKGGNLVSPRGVNGGKG 120

Query: 121 ----ENKTQPPASAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMA 180
               E K+QP    +S VKDG+  S  PLHE+KPQ+S PAAKAQVVGWPPIRSFRKNSMA
Sbjct: 121 LAGPECKSQP----ISAVKDGVQQSPNPLHEKKPQVSAPAAKAQVVGWPPIRSFRKNSMA 180

Query: 181 TQPPKNTDDADGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGH 240
           + PPK  DDA+GK+G+GCLY+KVSMDGAPYLRKVDLKTY SYVDLS ALEKMFS FTIG 
Sbjct: 181 SIPPKKDDDAEGKIGAGCLYIKVSMDGAPYLRKVDLKTYGSYVDLSLALEKMFSCFTIGQ 240

Query: 241 YGSNGVPNRDALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKS 300
            G +GV ++D ++ESRLMDLLHG+EYVLTYEDKD DWMLVGDVPW+MFT+SC RMRIMKS
Sbjct: 241 CGPHGVSSQDGMSESRLMDLLHGAEYVLTYEDKDHDWMLVGDVPWQMFTDSCRRMRIMKS 300

Query: 301 SEAIGLAPRAMEKCKNRN 307
           SEAIGLAPRAM+KCKN N
Sbjct: 301 SEAIGLAPRAMQKCKNSN 311

[Close]

BLAST of CsaV3_1G021860 vs. TrEMBL
Match: tr|A0A2P4JT67|A0A2P4JT67_QUESU (Auxin-responsive protein OS=Quercus suber OX=58331 GN=CFP56_51222 PE=3 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 9.3e-116
Identity = 230/317 (72.56%), Postives = 248/317 (78.23%), Query Frame = 0


Query: 1   MSIPLEHDYIGL-TESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFED 60
           MS+PLEHDYIGL +E+VPS+E SE+SS       LNLKATELRLGLPGSESP RD+G   
Sbjct: 1   MSVPLEHDYIGLSSEAVPSMEGSERSSS--GGLNLNLKATELRLGLPGSESPERDNGVGV 60

Query: 61  KNGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVN------- 120
               L    VSGAKRGFS AID AS KWVL  + GSEA+    G LFSPRG+N       
Sbjct: 61  LKSLL---VVSGAKRGFSDAIDGASGKWVLSGNGGSEAELGKGGNLFSPRGINGGGKGGG 120

Query: 121 -ENKTQPPASAVSGVKDGISP--SAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMAT 180
            E   Q        +KDG+ P  S KPL E+KPQLS PAAKAQVVGWPPIRSFRKNSMAT
Sbjct: 121 CECNNQNTGLGSPVLKDGVVPPQSPKPLQEKKPQLSAPAAKAQVVGWPPIRSFRKNSMAT 180

Query: 181 QPPKNTDDADGKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHY 240
             PKN DDA+GK GSGCLYVKVSMDGAPYLRKVDLKTY SY+DLSSALEKMFS FTIG  
Sbjct: 181 HSPKNDDDAEGKSGSGCLYVKVSMDGAPYLRKVDLKTYGSYMDLSSALEKMFSCFTIGQC 240

Query: 241 GSNGVPNRDALNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSS 300
            S+GVP+RD LNESRLMDLL GSEYVLTYEDKDGDWMLVGDVPWEMFT+SC R+RIMKSS
Sbjct: 241 SSHGVPSRDGLNESRLMDLLSGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRLRIMKSS 300

Query: 301 EAIGLAPRAMEKCKNRN 307
           EAIGLAPRAMEKCKNRN
Sbjct: 301 EAIGLAPRAMEKCKNRN 312

The following BLAST results are available for this feature:

BLAST of CsaV3_1G021860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150556.1	4.7e-172	100.00	PREDICTED: auxin-responsive protein IAA27 [Cucumis sativus] >KGN65095.1 hypothet...	[more]
XP_008462746.1	3.9e-166	97.39	PREDICTED: auxin-responsive protein IAA27 [Cucumis melo]	[more]
XP_022987799.1	1.4e-155	90.52	auxin-responsive protein IAA27-like [Cucurbita maxima] >XP_022987802.1 auxin-res...	[more]
XP_022961331.1	4.5e-154	90.20	auxin-responsive protein IAA27-like [Cucurbita moschata]	[more]
XP_022144958.1	1.4e-152	89.87	auxin-responsive protein IAA27-like [Momordica charantia] >XP_022144959.1 auxin-...	[more]

BLAST of CsaV3_1G021860 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G29080.1	8.2e-86	59.44	phytochrome-associated protein 2	[more]
AT2G22670.4	5.7e-71	49.08	indoleacetic acid-induced protein 8	[more]
AT5G65670.1	2.9e-67	47.40	indole-3-acetic acid inducible 9	[more]
AT3G04730.1	2.9e-62	49.83	indoleacetic acid-induced protein 16	[more]
AT4G14550.1	1.1e-61	51.62	indole-3-acetic acid inducible 14	[more]

BLAST of CsaV3_1G021860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZSY8\|IAA27_ARATH	1.5e-84	59.44	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=...	[more]
sp\|Q38826\|IAA8_ARATH	1.0e-69	49.08	Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1	[more]
sp\|Q38827\|IAA9_ARATH	5.3e-66	47.40	Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1	[more]
sp\|O24407\|IAA16_ARATH	5.1e-61	49.83	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=...	[more]
sp\|P0C132\|IAA30_ORYSJ	5.1e-61	71.86	Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30...	[more]

BLAST of CsaV3_1G021860 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT68\|A0A0A0LT68_CUCSA	3.1e-172	100.00	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G207820 PE=3 SV=1	[more]
tr\|A0A1S3CHQ1\|A0A1S3CHQ1_CUCME	2.6e-166	97.39	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501033 PE=3 SV=1	[more]
tr\|A0A2I4E6L1\|A0A2I4E6L1_9ROSI	7.6e-118	72.00	Auxin-responsive protein OS=Juglans regia OX=51240 GN=LOC108986756 PE=3 SV=1	[more]
tr\|A0A2P6RJQ1\|A0A2P6RJQ1_ROSCH	2.4e-116	71.38	Auxin-responsive protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0091261 PE=...	[more]
tr\|A0A2P4JT67\|A0A2P4JT67_QUESU	9.3e-116	72.56	Auxin-responsive protein OS=Quercus suber OX=58331 GN=CFP56_51222 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR000270	PB1_dom
IPR003311	AUX_IAA
IPR033389	AUX/IAA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G021860.1	CsaV3_1G021860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 181..301 e-value: 4.6E-42 score: 144.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..152
None	No IPR available	PANTHER	PTHR31734:SF39	SUBFAMILY NOT NAMED	coord: 10..306
None	No IPR available	SUPERFAMILY	SSF54277	CAD & PB1 domains	coord: 184..287
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 39..297 e-value: 2.7E-85 score: 286.0
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	FAMILY NOT NAMED	coord: 10..306
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 186..288 score: 24.273

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G021860	CSPI01G16430	Wild cucumber (PI 183967)	cpicucB007
CsaV3_1G021860	CmaCh12G001730	Cucurbita maxima (Rimu)	cmacucB0189
CsaV3_1G021860	CmoCh12G001340	Cucurbita moschata (Rifu)	cmocucB0173
CsaV3_1G021860	CsGy5G013000	Cucumber (Gy14) v2	cgybcucB202
CsaV3_1G021860	Carg12216	Silver-seed gourd	carcucB0043
CsaV3_1G021860	ClCG06G008840	Watermelon (Charleston Gray)	cucwcgB093
CsaV3_1G021860	Lsi06G008460	Bottle gourd (USVL1VR-Ls)	cuclsiB080
CsaV3_1G021860	Cla97C06G118630	Watermelon (97103) v2	cucwmbB080
CsaV3_1G021860	Bhi02G000976	Wax gourd	cucwgoB096

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None