CsaV3_1G017000 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G017000
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	tobamovirus multiplication protein 2A
Location	chr1 : 11508376 .. 11514477 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCATTTGCCAACTGGCCTCAACAGAGCTGGACCGTCTTTCTAATTCCATTTTCTCTTTTCTCTCTTTCTCTCTCATTTCAAGGTCCGGAAAAGCGAGCAATCTGATTATCATCTTCTCTCAATTTGTAAGTTCTCCGATTTCTTCCTTCATCCTCTTTAATTTTCAGCTAGATTATGCCCGCTTTCGATGTTTATTTGAAGAATTTTGCATGATTTCATTCTAAAGGCGGAGAATTGGGATATCGAGATAGAATTGTGCTGTTTTTTATATTAATTCCACTTTGATTGTTGTTTTATGGGGAAGGGAAGTGTTTATTTGAAGTTGTGAGGATTTTATTAGTTCAGGTGTTTTGGAAATTTGAAGTTTTTGTAGTTTGATTATAGGTGAGGATCCGTTTTTGTTTTATTTTTTTAATGGAGAATTTCGTGTTCGGATTCTTTAAGTTTGGGATATTGAAGCTAGTTCTATGTATTAAGAAATTGTTGGGTTATTTTTATTTTTTATTATTGGATATTAATTAGGGTTCTAATGCATGTAAGATGCATATTTGAAATGTTGTTTTAGGGATCGGAAGTACAGAGAGGATGGCCTGCAGAGGGTGCTTTGAGTGCCTATTGAAGCTTTTGAACTTCTTCTTGTCCCTGCTGGGTCTTGCCATGGTGGGCTATGGGATTTACTTATTGGTTGAGTACTTGCAATCTCATAGTGATGTTCCAGGACCTTCGTTGAGTGGTGATCATGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCTGTGTCTCTGTCTTCTAGCATCTTTGACAACCTTCCAAAAGCCTGGTATGAGTTTTACTTTTAAATGTAACCGTTTAAGTTGTAACATGTATGTTTCCTGCTGCTTGTAATTGCTGAATTTAGGAAGCAAAATATTCTGGAAAGTTACGAAGGGCATGATTGAGCTTCATAAATCATTGGTTTAGTGGCCATGAGCCCCGGAGCCCCATCTTCACCCTCCCCAATTTCTGGTGTAAGAATAGGATAACCTTTTAAAAAAGAAAAGGTAAAAAAAACAAACAGACCATGAACCTGAAGGATCAAGTAACATGAACCAACGCTGTGGTGAGTTTATGAAGTAACTGAATTAGGGTTCCACTCATTGACGATTTAAAAATTATGGATTTCCCACACATTCCACAATACTGCTTTATCCCTCAGGTTGAGCTGATGATTATAGCATGGATAACTCCTTCCAATTCAGGAACTGTGTTTTTTTTTGCCCCAGAAAGAACCAAATCCATAAAATCTCTTCAAGACTACAATCACATAACATACTTACACGAGTTAAAGAAGAGAAGTATTGATAGGGTTTTTAGTGGGCCAACTGGTTCGAATGCTCACATACATTTATAAAATTTATAAATAAAAATGAGCATAGGATATGGTTGTCCGCTATAATTTTTGACAGCAGACACAATTTAAGTGTATCAGTGAACAGTGTTTTGAAAGGTGCGGCCAGACGCGTGCCTAGGCCCAAGTCGCACGGCTTGGGCTTCTCCTTGAACAGGCGAGGCGTTGTGCATTTGGCGCGCGACTTACATGAGGTGCAAAGGTGCCAAAGGCTCTTGAGGCGCGAGCTTTTCACTCAGTTGTGGGCTGGGCTTTAATATATATATATATATATAACCTAATTACATGTCTTTTGAGTTAAGAAACATCCCAACTTTACGTTCCCAACTCTTCGTCTCATTTTTACCATAGTTATATACTTATAGTTTATACATTGTTGCTCCTTTCAATTTTGTAGATACAACATATACATACATACATACATATATATACATATACACACACACACACACATATATTCTTTATATATAGTGCGCCTCATGAAAAAAAACCTGTGCCTTTTTGTGCACCTTGCACCTAGACTCCAGAGGGCCATTGCGCCTTAGTACGCCTTGAGTCTTTTAAAACACTGTCAGTGATTTACAATCAACTTAGAGATTTTCTTTATTGTAGATATTGAATAGGAATTGCTAACCGGTAATGTTATAAATTTTCAACCACTATTCTTGTTGCTTAATTTCTTGGAAACTCAAGCCAGTTTATTGACAGTCTCCGCTATATATTGGAACTGGTGTACAAATTGATCTGCAGTACATTGCATTAAGTATTGTTGAGAATATAAGATATCTCGTTGTAAAATGATGGTATGCCATATCAAAAGAATTGGATGTGAGTTGTGACATCTTTGCCTCTTCTTCTTCTTCTCCTTCTTTTTGTAATAATAGAAAAGGCTTGTCTCTGTTTAAAAAAAAAAACAAATTTTTAATCTGAAAGGACTCCATTCCCTCAATCTTCAAACACAAGCAAATTCATATTGTCAGTCAGTACATTTTAGCAGCCATAGATGATAAAATAATATGAATATTTTTTAATCTGATTAATCTGTTTCTTTTATTTTAATTCTTTTGCAGGTTCATATATTTGTTCATTGCTACGGGAGTCACTATCTTTGTTGTCTCTTGTTTTGGCTGTATTGGAGCTGCAACACGTAGTGGATGCTGTTTAAGTTGTGTATCCTATTTGCCTGCATGTCTGGATTGTTGTTTGATTTATCAATTATTGATGAAACAATTAGGCCACCAGGGAACAACTTGTTGGTATTCGGATAATTACACTATTCATAGAAATAAGATGGTGATACTAAATATAATACATGTTAATGATAACAAATAAAGTTGAATCTAAAAGGTTTGATATCTGTTGTCATTTGAGTTTTAAATTACCATATCCTTAACGATCACAGTATTCGATTTTATTGCTTCTACTGATTTTGGTTCAACTAGGATGTGGTGCCTTCATATTCTTTGACAAAAATTGGAGAGATGTGAGTATTTGTTCACAAACTAAAATTTAACATATAAGTTTATTTTCTTATGCTCTGTTTTCTTATCCTGAAGGAAATTCCTGGGGACAGAACAGGAAACTTTGATAAGATCTATGAACTTCTGGAAAGCAAGTGGGAAATCATCAGATGGGTTGCACTAGGAACTATAATTTTTGAGGTACGTGAACCCCTTTTTGGAGTGTTTGAATCTTAGACTAGCATGATGGCAGACATCGTTGGGTAAAAGAGCCTAGTGATGATCTAACCTCTTAACTAAGCGATGCTCTAACCCCATAACTAAGAGGGCTAACATAGCAGAAATGTTGATTATCCCTGAACTTTTGTAAGTGTATCAATTTACAACCTTTAGGTTTTGTTTGAAAAACACTGTATGAATCTTAGAACTTTTAGCTATCAAAATCTTGAAATTTCAAATTCGAGTCAATTTAGATTTTTCATTATGACTACCTTTGAAAATCGTCGTTCCATTAATTTTCACACGTGTAAACTTCTCCAAATGTTGGTTTTACAAAATGGACAATTATAATTGAAGCATGGATACTTCTAAAGAGAAATCCAAACTAAGCATTTTAGTTGATTCACTAACGAAAGTTTGGGGGTTTTATTAATACAATTAAGTATCACACGTTGTTTTTTCAAACAAATGTAATGTTTTTTATTAATACAACTCCTAAAGTTTATCAATATAATTTGATATCTTCCCTTGATATAATGATTAATAGAATATATCATTAGAAAACTTTGATTTAATTATTGAATGGATATGTAGCAATAATCAATGTGCTAATCTCAATAAGATGGTTCATTTATGTTTTTAGATTCAAATGACGTTTGAAATTCTTGTTCTTTTTATGATCTGGGTTTAATCTTATTTTATTCTTTTTAGTTATCTACTCTTTACTGAAATTCTCTCACCAACAATGTGTACTTTTACACCCTTCATTAAATTTTAGAGATCCATTTCTTTGTCTTGTGAATTTTGGTTTAGAGGATTTTTTTTTTCAGGATGAGTTTAACATATGTGATTGGTCGGGTTTTTAATTCCAATTTATGATTTCGTATTAATTCATTTTACTTTTACACCAATGATAATATTTGTTGTGTTGATCACAAGAGAACTCACAACTTGTAATACTTGAAATGTTGCTTCAACATAGTTGGGTTTACTTCCGTTTTTCTCCTAATTGATTTAATAACTGTAAGCTTTTTAGTTTTCCCTAAGCCACATAGCTACGAATTCCCTTTTATTGCTTGCACTGATTATATCTCCTTTTTTTTCTCTCCCAATGAGAACAAAAGTTCCACTTTGTAATAATACAATGTCTTGATAGATTTCTTTACACAAATTTCTTTTGTAAATACAACCTTTTAATTCGTCAGTGACAATGATCGGAAGGCTCTCATAGTTTTTGTTTCAGTGTGCCCTCTACCTCTGTCCATAGGTCGATCTTGCTCTTTTTCGAACATCATCCTTTTGTTTCTTAACCAAAAAAATTACTGTTTCATTGTATTTGCAGGCTCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGACCTGTAGACTATGACAGTGATGATGAATACATTGCTCCAAGGCAACAAATCCGACAACCGTTGATCAATAGGCCCGTTGCTCCAGCAACAGGTGTGCCTGTTGCTGGGACACTTGATCAACGACCAAGTCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGGTATAACCTTCTCAACGTTGAATTTTCCCACTGAAAATAATGACAATGTAAAGATATACAAGTCAACGACAAATTTTCCTTTCTTTCTATTCTTTCATTTACTATAGGATAAGAAATTGATCCTGATATTAATCAAATAGCTAAAATATAGAGGAAATTCGTGATATTTAGACCTTCTCACTTTAACCCACTAAACAATTGCCTACCTTCTACTCCTCTCACTCATTCTATTTAGTCAACTCCCACTAACAAACTCCTTGGCTAAGTATTATTGTCTTTAATTCCCTAATAATATTTCTAGCCACTCAAATATCTTTCTTTTCAGATACTAGGACTTCTCATGACACTTTATCATAGTGTGTATTTATGTTGGGAGATTCCTTTTGAAGTCGGTATAAATATGTCAGACGAGGGAAATTTCATTGTTAAATAGTCTTTTTGTTTCCCCAAGAATCTTAAGTGGCATCTTTTTGCCTACCTACTATACTGATAAACCCTTGACCTTTTGATTCTAATTTGGATGTCGTCATTGGTTCACATTGAGTTTTATACAACACAGCTCTTAATTGGAGATTTGCATGGAAGCTTTGTCCCGGACCATGAACTACTTCATATATGATCTGATGGCATGTTCTTTTCACAATTTTTTTCCATTCTGACTTTGTTCTTTTTATTTTTGAAACAGTATGGGCTGGATACTTCGGAGTTCACGTACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCTCCTCAGCCAGCCGAAGAAAAGAGCCGCTGCACAATCATGTGATAAAAGTATGCCTTGTACTATTTGTTTCTCACTCCACTGTAGTGTTTTAGCGGGTCCGAATGCTTGTGCCCGCTTGTGTTCACTTGTGTATAACCAAGAGGTTTTTCCAGAGGCTTTACTTGTGTAACCTTAACTTTTCAGAAAAAAAAAAGTTGTGACTATTTTTGTGTGAAACCATTCTTCTACATTTGGATTTGTCCTTTTGTTCAAGATGGAATGGGTCAGTATAGGACCAAGGAAAATGATTGTAAGCTCCATCTCAATTGTGGAAAAACTGCTTGCTGGAAGTTACTTTTAATTGTGAGTTCAATCCAAAGTAAATATGAAATGTTATTATGAGTCATGCTAGGCCTCTGCTCTCCTTGAGTCCTCTCGACTTCAATGGATGACCGAATACTTATTCGATAACTGCTAGTGTTTCCATTTTTCTGTTGTGCCAACTTTTGTTGCTTTGTTTCTGCTTTGTTCTGTGTACAAAGAATGAGGAGTTGAACCACCCTTTTTTGCTTTAGCTATTTACAAGAGTTTGAGTCGGCCTTAAAGTTTGGATGTTGATGTTAGGAACTTTGTTATCTCAAACTAGTGGTTTTGACTTTTGAAACTTGTGTTTGTTTTGATATAAATGTAACTAAACCATTGCCTTTGACTATCTAATTTGTAGATACAATCAGCATTAATCAATTAATG

mRNA sequence

ATGGCCTGCAGAGGGTGCTTTGAGTGCCTATTGAAGCTTTTGAACTTCTTCTTGTCCCTGCTGGGTCTTGCCATGGTGGGCTATGGGATTTACTTATTGGTTGAGTACTTGCAATCTCATAGTGATGTTCCAGGACCTTCGTTGAGTGGTGATCATGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCTGTGTCTCTGTCTTCTAGCATCTTTGACAACCTTCCAAAAGCCTGGTTCATATATTTGTTCATTGCTACGGGAGTCACTATCTTTGTTGTCTCTTGTTTTGGCTGTATTGGAGCTGCAACACGTAGTGGATGCTGTTTAAGTTGTTATTCGATTTTATTGCTTCTACTGATTTTGGTTCAACTAGGATGTGGTGCCTTCATATTCTTTGACAAAAATTGGAGAGATGAAATTCCTGGGGACAGAACAGGAAACTTTGATAAGATCTATGAACTTCTGGAAAGCAAGTGGGAAATCATCAGATGGGTTGCACTAGGAACTATAATTTTTGAGGCTCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGACCTGTAGACTATGACAGTGATGATGAATACATTGCTCCAAGGCAACAAATCCGACAACCGTTGATCAATAGGCCCGTTGCTCCAGCAACAGGTGTGCCTGTTGCTGGGACACTTGATCAACGACCAAGTCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGTATGGGCTGGATACTTCGGAGTTCACGTACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCTCCTCAGCCAGCCGAAGAAAAGAGCCGCTGCACAATCATGTGA

Coding sequence (CDS)

ATGGCCTGCAGAGGGTGCTTTGAGTGCCTATTGAAGCTTTTGAACTTCTTCTTGTCCCTGCTGGGTCTTGCCATGGTGGGCTATGGGATTTACTTATTGGTTGAGTACTTGCAATCTCATAGTGATGTTCCAGGACCTTCGTTGAGTGGTGATCATGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCTGTGTCTCTGTCTTCTAGCATCTTTGACAACCTTCCAAAAGCCTGGTTCATATATTTGTTCATTGCTACGGGAGTCACTATCTTTGTTGTCTCTTGTTTTGGCTGTATTGGAGCTGCAACACGTAGTGGATGCTGTTTAAGTTGTTATTCGATTTTATTGCTTCTACTGATTTTGGTTCAACTAGGATGTGGTGCCTTCATATTCTTTGACAAAAATTGGAGAGATGAAATTCCTGGGGACAGAACAGGAAACTTTGATAAGATCTATGAACTTCTGGAAAGCAAGTGGGAAATCATCAGATGGGTTGCACTAGGAACTATAATTTTTGAGGCTCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGACCTGTAGACTATGACAGTGATGATGAATACATTGCTCCAAGGCAACAAATCCGACAACCGTTGATCAATAGGCCCGTTGCTCCAGCAACAGGTGTGCCTGTTGCTGGGACACTTGATCAACGACCAAGTCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGTATGGGCTGGATACTTCGGAGTTCACGTACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCTCCTCAGCCAGCCGAAGAAAAGAGCCGCTGCACAATCATGTGA

Protein sequence

MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRPMLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLLILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLLALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM

Homology

[Close]

BLAST of CsaV3_1G017000 vs. NCBI nr
Match: XP_004148498.1 (PREDICTED: tobamovirus multiplication protein 2A [Cucumis sativus] >KGN60424.1 hypothetical protein Csa_3G904130 [Cucumis sativus])

HSP 1 Score: 560.8 bits (1444), Expect = 2.5e-156
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL
Sbjct: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL
Sbjct: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR
Sbjct: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. NCBI nr
Match: XP_008465936.1 (PREDICTED: tobamovirus multiplication protein 2A [Cucumis melo])

HSP 1 Score: 542.3 bits (1396), Expect = 9.4e-151
Identity = 269/279 (96.42%), Postives = 274/279 (98.21%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SDVPGPSLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPGPSLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSS+IFDNLPKAWFIYLFIATGV +FVVSCFGCIGAATRSGCCLSCYSILLLLL
Sbjct: 61  MLMAVSLSSNIFDNLPKAWFIYLFIATGVIVFVVSCFGCIGAATRSGCCLSCYSILLLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGC AFIFFDKNWRDEIPGD+TGNFDKIYELLE+KW+IIRWVALGTIIFEALLFLL
Sbjct: 121 ILVQLGCAAFIFFDKNWRDEIPGDKTGNFDKIYELLENKWKIIRWVALGTIIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWS R
Sbjct: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSAR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQ AEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQAAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. NCBI nr
Match: XP_023533384.1 (tobamovirus multiplication protein 2A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 532.3 bits (1370), Expect = 9.7e-148
Identity = 261/279 (93.55%), Postives = 271/279 (97.13%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SDVP P LSGDHD++QLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPRPPLSGDHDVIQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSS+IFDNLP+AWFIYLFIA GV IFVVSCFGCIGAATR+GCCLSCYS+L+LLL
Sbjct: 61  MLMAVSLSSNIFDNLPRAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCYSVLVLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGC AFIFFDK+WRDEIPGDRTGNFDKIYELLE KWEIIRWVALG +IFEALLFLL
Sbjct: 121 ILVQLGCAAFIFFDKHWRDEIPGDRTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRP+DYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR
Sbjct: 181 ALVVRAANRPLDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. NCBI nr
Match: XP_022931040.1 (tobamovirus multiplication protein 2A-like [Cucurbita moschata])

HSP 1 Score: 531.2 bits (1367), Expect = 2.2e-147
Identity = 260/279 (93.19%), Postives = 271/279 (97.13%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SDVP P LSGDHD++QLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPRPPLSGDHDVIQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSS+IFDNLP+AWFIYLFIA GV IFVVSCFGCIGAATR+GCCLSCYS+L+LLL
Sbjct: 61  MLMAVSLSSNIFDNLPRAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCYSVLVLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGC AFIFFDK+WRDEIPGD+TGNFDKIYELLE KWEIIRWVALG +IFEALLFLL
Sbjct: 121 ILVQLGCAAFIFFDKHWRDEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRP+DYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR
Sbjct: 181 ALVVRAANRPLDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. NCBI nr
Match: XP_022996390.1 (tobamovirus multiplication protein 2A-like [Cucurbita maxima])

HSP 1 Score: 528.9 bits (1361), Expect = 1.1e-146
Identity = 259/279 (92.83%), Postives = 269/279 (96.42%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SDVP P LSGDHD++QLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPRPPLSGDHDVIQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSS+IFDNLP+AWFIYLFIA G  IFVVSCFGCIGAATR+GCCLSCYS+L+LLL
Sbjct: 61  MLMAVSLSSNIFDNLPRAWFIYLFIAVGAIIFVVSCFGCIGAATRNGCCLSCYSVLVLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGC AFIFFDK+WRDEIPGD+TGNFDKIYELLE KWEIIRWVALG +IFEALLFLL
Sbjct: 121 ILVQLGCAAFIFFDKHWRDEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWS R
Sbjct: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSAR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. TAIR10
Match: AT1G32400.1 (tobamovirus multiplication 2A)

HSP 1 Score: 390.6 bits (1002), Expect = 8.3e-109
Identity = 191/280 (68.21%), Postives = 216/280 (77.14%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQ-SHSDVPGPSLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL VEY + + + V     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLL 120
           P+LMAVSLSS+IFDNLPKAWFIYLFI  GV +FV+SC GC+G  +RS CC          
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCXXXXXXXXXX 120

Query: 121 LILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFL 180
               +LG  AFIFFD +WRDE+P DRTGNFD IY  L   W+I+RWVALG ++FEALLFL
Sbjct: 121 XXXXELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFL 180

Query: 181 LALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWST 240
           LAL+VRAAN P +YDSDDEY+APRQQIRQP INR  AP TGVPVA TLDQRPSR+D WS 
Sbjct: 181 LALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSA 240

Query: 241 RMREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           RMREKYGLDTSEFTYNPSESHRFQQ+  QP EEK RCTIM
Sbjct: 241 RMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of CsaV3_1G017000 vs. TAIR10
Match: AT2G20230.1 (Tetraspanin family protein)

HSP 1 Score: 126.3 bits (316), Expect = 2.9e-29
Identity = 87/269 (32.34%), Postives = 134/269 (49.81%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSL---SGDHDLVQLGR 62
           C   F   LK+LNF  + +G++++ Y I++L EY +     P PS    SG      +  
Sbjct: 6   CHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSE 65

Query: 63  PMLMAVSLSSSIF--------------DNLPKAWFIYLFIATGVTIFVVSCFGCIGAATR 122
           P+   +   +SI                +LP  WFIY F+A G+ + +V+  G I A   
Sbjct: 66  PLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAI 125

Query: 123 SGCCLSCYSILLLLLILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRW 182
           +GCCL  YSIL  LLIL++    A+I  D++W  ++P D TG    +   +E   +I +W
Sbjct: 126 NGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKW 185

Query: 183 VALGTIIFEALLFLLALVVRA----ANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGV 242
           V +  +  + L  LLA+V+RA        +D + DDE   PR +   PL+     P    
Sbjct: 186 VGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEEDDE--NPRSRTWDPLL----GPQGNQ 245

Query: 243 PVAGTLDQRPSRNDAWSTRMREKYGLDTS 251
             AG+     S+ + WS+R+REKYGL+ S
Sbjct: 246 APAGS-----SKIENWSSRIREKYGLNQS 263

[Close]

BLAST of CsaV3_1G017000 vs. TAIR10
Match: AT4G28770.2 (Tetraspanin family protein)

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-28
Identity = 85/286 (29.72%), Postives = 138/286 (48.25%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDV------------PGPSLSG 62
           C   F  +LK+LNF  + +G++++ Y I++L +Y   H  V            P  S S 
Sbjct: 50  CHVSFASILKILNFLQAFIGISIIIYSIWMLDQY-NHHVPVDPPPSXXXXXXXPDSSYSF 109

Query: 63  DHDLVQLGR---------PMLMAVSLSSSIFD--------NLPKAWFIYLFIATGVTIFV 122
            + ++++             +  + L S   D        +LP  WFIY F+A G+ + +
Sbjct: 110 SNSIIEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCI 169

Query: 123 VSCFGCIGAATRSGCCLSCYSILLLLLILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIY 182
           V+  G I A   +GCCL  YSIL  LLI+++     FI  D++W  ++P D TG  + + 
Sbjct: 170 VTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLR 229

Query: 183 ELLESKWEIIRWVALGTIIFEALLFLLALVVRA--ANRPVDYDSDDEYIAPRQQIRQPLI 242
             +E   +I +WV +  +  + L  LLALV+RA  + R  + D +D++  P  + R  L+
Sbjct: 230 AFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFENPMSRARDNLL 289

Query: 243 NRPVAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPS 258
                     P A       S  D W +R+REKYGL  S+ ++ PS
Sbjct: 290 G---------PQANQTSSGSSNIDNWRSRIREKYGLINSQ-SHTPS 324

[Close]

BLAST of CsaV3_1G017000 vs. TAIR10
Match: AT2G20740.1 (Tetraspanin family protein)

HSP 1 Score: 109.8 bits (273), Expect = 2.8e-24
Identity = 66/212 (31.13%), Postives = 112/212 (52.83%), Query Frame = 0


Query: 4   RGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRPMLM 63
           R C + +LKL+N  + ++G+AM+ Y ++L+ ++ +   ++  P    DH           
Sbjct: 6   RSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNL--PFADSDH----------- 65

Query: 64  AVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLLILV 123
                       P  WFIY F+  G  + VV+C G I A T +GCCL  Y   ++LL +V
Sbjct: 66  ------------PVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMV 125

Query: 124 QLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLLALV 183
           + G  A IF +++W+ + P D +G F +  + +ES ++I +W+ L  +  + L  L+A++
Sbjct: 126 EGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAML 185

Query: 184 VRA--ANRPVDYDSDDEY----IAPRQQIRQP 210
           ++A   +    YDSDDEY    +A  Q  RQP
Sbjct: 186 LKALGPHPHRHYDSDDEYNVSTVALLQDARQP 192

[Close]

BLAST of CsaV3_1G017000 vs. Swiss-Prot
Match: sp|Q9C5W7|TOM2A_ARATH (Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A PE=1 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.5e-107
Identity = 191/280 (68.21%), Postives = 216/280 (77.14%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQ-SHSDVPGPSLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL VEY + + + V     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLL 120
           P+LMAVSLSS+IFDNLPKAWFIYLFI  GV +FV+SC GC+G  +RS CC          
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCXXXXXXXXXX 120

Query: 121 LILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFL 180
               +LG  AFIFFD +WRDE+P DRTGNFD IY  L   W+I+RWVALG ++FEALLFL
Sbjct: 121 XXXXELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFL 180

Query: 181 LALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWST 240
           LAL+VRAAN P +YDSDDEY+APRQQIRQP INR  AP TGVPVA TLDQRPSR+D WS 
Sbjct: 181 LALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSA 240

Query: 241 RMREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           RMREKYGLDTSEFTYNPSESHRFQQ+  QP EEK RCTIM
Sbjct: 241 RMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of CsaV3_1G017000 vs. Swiss-Prot
Match: sp|Q93XY5|TET18_ARATH (Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.2e-28
Identity = 87/269 (32.34%), Postives = 134/269 (49.81%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSL---SGDHDLVQLGR 62
           C   F   LK+LNF  + +G++++ Y I++L EY +     P PS    SG      +  
Sbjct: 6   CHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSE 65

Query: 63  PMLMAVSLSSSIF--------------DNLPKAWFIYLFIATGVTIFVVSCFGCIGAATR 122
           P+   +   +SI                +LP  WFIY F+A G+ + +V+  G I A   
Sbjct: 66  PLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAI 125

Query: 123 SGCCLSCYSILLLLLILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRW 182
           +GCCL  YSIL  LLIL++    A+I  D++W  ++P D TG    +   +E   +I +W
Sbjct: 126 NGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKW 185

Query: 183 VALGTIIFEALLFLLALVVRA----ANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGV 242
           V +  +  + L  LLA+V+RA        +D + DDE   PR +   PL+     P    
Sbjct: 186 VGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEEDDE--NPRSRTWDPLL----GPQGNQ 245

Query: 243 PVAGTLDQRPSRNDAWSTRMREKYGLDTS 251
             AG+     S+ + WS+R+REKYGL+ S
Sbjct: 246 APAGS-----SKIENWSSRIREKYGLNQS 263

[Close]

BLAST of CsaV3_1G017000 vs. Swiss-Prot
Match: sp|Q9SVU4|TET20_ARATH (Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.4e-27
Identity = 85/286 (29.72%), Postives = 138/286 (48.25%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDV------------PGPSLSG 62
           C   F  +LK+LNF  + +G++++ Y I++L +Y   H  V            P  S S 
Sbjct: 6   CHVSFASILKILNFLQAFIGISIIIYSIWMLDQY-NHHVPVDPPPSXXXXXXXPDSSYSF 65

Query: 63  DHDLVQLGR---------PMLMAVSLSSSIFD--------NLPKAWFIYLFIATGVTIFV 122
            + ++++             +  + L S   D        +LP  WFIY F+A G+ + +
Sbjct: 66  SNSIIEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCI 125

Query: 123 VSCFGCIGAATRSGCCLSCYSILLLLLILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIY 182
           V+  G I A   +GCCL  YSIL  LLI+++     FI  D++W  ++P D TG  + + 
Sbjct: 126 VTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLR 185

Query: 183 ELLESKWEIIRWVALGTIIFEALLFLLALVVRA--ANRPVDYDSDDEYIAPRQQIRQPLI 242
             +E   +I +WV +  +  + L  LLALV+RA  + R  + D +D++  P  + R  L+
Sbjct: 186 AFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFENPMSRARDNLL 245

Query: 243 NRPVAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPS 258
                     P A       S  D W +R+REKYGL  S+ ++ PS
Sbjct: 246 G---------PQANQTSSGSSNIDNWRSRIREKYGLINSQ-SHTPS 280

[Close]

BLAST of CsaV3_1G017000 vs. Swiss-Prot
Match: sp|Q940P5|TET19_ARATH (Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.1e-23
Identity = 66/212 (31.13%), Postives = 112/212 (52.83%), Query Frame = 0


Query: 4   RGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRPMLM 63
           R C + +LKL+N  + ++G+AM+ Y ++L+ ++ +   ++  P    DH           
Sbjct: 6   RSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNL--PFADSDH----------- 65

Query: 64  AVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLLILV 123
                       P  WFIY F+  G  + VV+C G I A T +GCCL  Y   ++LL +V
Sbjct: 66  ------------PVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMV 125

Query: 124 QLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLLALV 183
           + G  A IF +++W+ + P D +G F +  + +ES ++I +W+ L  +  + L  L+A++
Sbjct: 126 EGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAML 185

Query: 184 VRA--ANRPVDYDSDDEY----IAPRQQIRQP 210
           ++A   +    YDSDDEY    +A  Q  RQP
Sbjct: 186 LKALGPHPHRHYDSDDEYNVSTVALLQDARQP 192

[Close]

BLAST of CsaV3_1G017000 vs. TrEMBL
Match: tr|A0A0A0LHD4|A0A0A0LHD4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G904130 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 1.7e-156
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL
Sbjct: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL
Sbjct: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR
Sbjct: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. TrEMBL
Match: tr|A0A1S3CQ26|A0A1S3CQ26_CUCME (tobamovirus multiplication protein 2A OS=Cucumis melo OX=3656 GN=LOC103503508 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 6.2e-151
Identity = 269/279 (96.42%), Postives = 274/279 (98.21%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SDVPGPSLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPGPSLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSS+IFDNLPKAWFIYLFIATGV +FVVSCFGCIGAATRSGCCLSCYSILLLLL
Sbjct: 61  MLMAVSLSSNIFDNLPKAWFIYLFIATGVIVFVVSCFGCIGAATRSGCCLSCYSILLLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGC AFIFFDKNWRDEIPGD+TGNFDKIYELLE+KW+IIRWVALGTIIFEALLFLL
Sbjct: 121 ILVQLGCAAFIFFDKNWRDEIPGDKTGNFDKIYELLENKWKIIRWVALGTIIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWS R
Sbjct: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSAR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQ AEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQAAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. TrEMBL
Match: tr|I3SIX7|I3SIX7_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 2.8e-119
Identity = 211/279 (75.63%), Postives = 243/279 (87.10%), Query Frame = 0


Query: 2   ACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQ-SHSDVPGPSLSGDHDLVQLGRP 61
           ACRGC+ECLLKLLNF L+L+GLAMVGYGIYLLVE+ + S + +   ++S D  LVQLGRP
Sbjct: 4   ACRGCWECLLKLLNFLLTLVGLAMVGYGIYLLVEFSKASDNTLSVSTVSDDQTLVQLGRP 63

Query: 62  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 121
           MLMAVSLS+S FD+LPKAWFIYLFI  GV +FV+SCFGCIGA TRSGCCLSC+++L++LL
Sbjct: 64  MLMAVSLSNSFFDDLPKAWFIYLFIGIGVVLFVISCFGCIGAMTRSGCCLSCFAVLVVLL 123

Query: 122 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 181
           IL +LGC AFIFFDK+W+ EIP D+TGNFD IYE L   W I+RWVALG +IFEALLF+L
Sbjct: 124 ILAELGCAAFIFFDKSWKKEIPTDKTGNFDMIYEFLRENWNIVRWVALGIVIFEALLFVL 183

Query: 182 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 241
           AL+VRAANRP DYDSD+E+I PRQQ RQPL+NRP APA+GVPVAGT+DQRPSRNDAWSTR
Sbjct: 184 ALIVRAANRPADYDSDEEFINPRQQARQPLLNRPAAPASGVPVAGTIDQRPSRNDAWSTR 243

Query: 242 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSES RFQQV  QP EE+SRC IM
Sbjct: 244 MREKYGLDTSEFTYNPSESQRFQQVNSQPTEERSRCAIM 282

[Close]

BLAST of CsaV3_1G017000 vs. TrEMBL
Match: tr|B9SNR7|B9SNR7_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1278000 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 2.8e-119
Identity = 208/280 (74.29%), Postives = 243/280 (86.79%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQ-SHSDVPGPSLSGDHDLVQLGR 60
           MACRGC EC+LKLLN  L+L+GLAMVGYGIYL VEY + +  D      + D  L+QLGR
Sbjct: 1   MACRGCLECILKLLNLLLTLVGLAMVGYGIYLFVEYTRAAGGDTLLAPATNDSSLIQLGR 60

Query: 61  PMLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLL 120
           PMLMAVSLS S+ D LPKAWFIYLFI  G+ +FV+SCFGCIG+ TR+GCCLSCYS+L++L
Sbjct: 61  PMLMAVSLSDSLVDKLPKAWFIYLFIGVGLILFVISCFGCIGSVTRNGCCLSCYSVLVIL 120

Query: 121 LILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFL 180
           LIL++LGC AFIFFDK+W++EIP D+TG+FD IY+ L+ KW+I+RWVALG +I EALLF+
Sbjct: 121 LILIELGCAAFIFFDKSWKEEIPTDKTGDFDMIYDFLKEKWKIVRWVALGVVILEALLFV 180

Query: 181 LALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWST 240
           LAL+VRAANRP +YDSDDE IAPRQQIRQPL+NRP  PATGVPVAGTLDQRPSRNDAWST
Sbjct: 181 LALIVRAANRPAEYDSDDELIAPRQQIRQPLLNRPPGPATGVPVAGTLDQRPSRNDAWST 240

Query: 241 RMREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           RMREKYGLDTSEF+YNPSESHRFQQV+ QP EE+SRCTIM
Sbjct: 241 RMREKYGLDTSEFSYNPSESHRFQQVSTQPTEERSRCTIM 280

[Close]

BLAST of CsaV3_1G017000 vs. TrEMBL
Match: tr|A0A1U8KWU2|A0A1U8KWU2_GOSHI (tobamovirus multiplication protein 2A-like OS=Gossypium hirsutum OX=3635 GN=LOC107920374 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.1e-118
Identity = 211/280 (75.36%), Postives = 240/280 (85.71%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPS-LSGDHDLVQLGR 60
           MACRGC ECLLKLLNF ++L GLAMVGYGIYL VEY  +       S +  D DL+Q GR
Sbjct: 1   MACRGCLECLLKLLNFLMTLAGLAMVGYGIYLFVEYKNAADTAMLLSPVGSDRDLIQFGR 60

Query: 61  PMLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLL 120
           PMLMAVSLSSSIFDNLPKAWFIYLFI  G  +FV+SCFGCIGAATR+ CCL+CYS+L++L
Sbjct: 61  PMLMAVSLSSSIFDNLPKAWFIYLFIGVGAVLFVISCFGCIGAATRNICCLTCYSVLVIL 120

Query: 121 LILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFL 180
           LILV+LGC AFIFFDKNW+DE+P D+TG+FD IY+ LE  W II+W ALG +I EAL+FL
Sbjct: 121 LILVELGCAAFIFFDKNWKDELPTDKTGDFDMIYDFLEENWTIIKWAALGIVILEALIFL 180

Query: 181 LALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWST 240
           LAL+VRAANRP DYDSDDE+IAPR QIRQPLINRP APA GVPV  +L+QRPSRNDAWST
Sbjct: 181 LALMVRAANRPADYDSDDEFIAPRPQIRQPLINRPPAPAAGVPVVPSLEQRPSRNDAWST 240

Query: 241 RMREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           RMREKYGLDTSEFTYNPSES+R+Q VAPQPAEE+SRC+IM
Sbjct: 241 RMREKYGLDTSEFTYNPSESNRYQPVAPQPAEERSRCSIM 280

The following BLAST results are available for this feature:

BLAST of CsaV3_1G017000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148498.1	2.5e-156	100.00	PREDICTED: tobamovirus multiplication protein 2A [Cucumis sativus] >KGN60424.1 h...	[more]
XP_008465936.1	9.4e-151	96.42	PREDICTED: tobamovirus multiplication protein 2A [Cucumis melo]	[more]
XP_023533384.1	9.7e-148	93.55	tobamovirus multiplication protein 2A-like [Cucurbita pepo subsp. pepo]	[more]
XP_022931040.1	2.2e-147	93.19	tobamovirus multiplication protein 2A-like [Cucurbita moschata]	[more]
XP_022996390.1	1.1e-146	92.83	tobamovirus multiplication protein 2A-like [Cucurbita maxima]	[more]

BLAST of CsaV3_1G017000 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32400.1	8.3e-109	68.21	tobamovirus multiplication 2A	[more]
AT2G20230.1	2.9e-29	32.34	Tetraspanin family protein	[more]
AT4G28770.2	2.5e-28	29.72	Tetraspanin family protein	[more]
AT2G20740.1	2.8e-24	31.13	Tetraspanin family protein	[more]

BLAST of CsaV3_1G017000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C5W7\|TOM2A_ARATH	1.5e-107	68.21	Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A P...	[more]
sp\|Q93XY5\|TET18_ARATH	5.2e-28	32.34	Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1	[more]
sp\|Q9SVU4\|TET20_ARATH	4.4e-27	29.72	Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1	[more]
sp\|Q940P5\|TET19_ARATH	5.1e-23	31.13	Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1	[more]

BLAST of CsaV3_1G017000 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LHD4\|A0A0A0LHD4_CUCSA	1.7e-156	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G904130 PE=4 SV=1	[more]
tr\|A0A1S3CQ26\|A0A1S3CQ26_CUCME	6.2e-151	96.42	tobamovirus multiplication protein 2A OS=Cucumis melo OX=3656 GN=LOC103503508 PE...	[more]
tr\|I3SIX7\|I3SIX7_LOTJA	2.8e-119	75.63	Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1	[more]
tr\|B9SNR7\|B9SNR7_RICCO	2.8e-119	74.29	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1278000 PE=4 SV=1	[more]
tr\|A0A1U8KWU2\|A0A1U8KWU2_GOSHI	1.1e-118	75.36	tobamovirus multiplication protein 2A-like OS=Gossypium hirsutum OX=3635 GN=LOC1...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR018499	Tetraspanin/Peripherin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0046786	viral replication complex formation and maintenance
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0009705	plant-type vacuole membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005773	vacuole
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0043621	protein self-association

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G017000.1	CsaV3_1G017000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspannin	coord: 9..137 e-value: 2.2E-15 score: 56.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..279
None	No IPR available	PANTHER	PTHR19282:SF268	SUBFAMILY NOT NAMED	coord: 2..229
None	No IPR available	PANTHER	PTHR19282	TETRASPANIN	coord: 2..229

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G017000	CSPI03G47070	Wild cucumber (PI 183967)	cpicucB127
CsaV3_1G017000	Cucsa.313470	Cucumber (Gy14) v1	cgycucB482
CsaV3_1G017000	CmaCh19G004430	Cucurbita maxima (Rimu)	cmacucB0603
CsaV3_1G017000	CmoCh19G004550	Cucurbita moschata (Rifu)	cmocucB0589
CsaV3_1G017000	CmoCh02G016360	Cucurbita moschata (Rifu)	cmocucB0679
CsaV3_1G017000	Cp4.1LG15g03410	Cucurbita pepo (Zucchini)	cpecucB0288
CsaV3_1G017000	Cp4.1LG05g01990	Cucurbita pepo (Zucchini)	cpecucB0876
CsaV3_1G017000	CsGy3G044460	Cucumber (Gy14) v2	cgybcucB103
CsaV3_1G017000	Cla016149	Watermelon (97103) v1	cucwmB002
CsaV3_1G017000	MELO3C003376	Melon (DHL92) v3.5.1	cucmeB071
CsaV3_1G017000	ClCG09G012320	Watermelon (Charleston Gray)	cucwcgB001
CsaV3_1G017000	Lsi05G000540	Bottle gourd (USVL1VR-Ls)	cuclsiB066
CsaV3_1G017000	MELO3C003376.2	Melon (DHL92) v3.6.1	cucmedB067
CsaV3_1G017000	Cla97C09G175160	Watermelon (97103) v2	cucwmbB091
CsaV3_1G017000	BhiUN793G5	Wax gourd	cucwgoB078

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_1G017000	CsaV3_3G049480	Cucumber (Chinese Long) v3	cuccucB019

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G017000	Cucurbita pepo (Zucchini)	cpecucB0629
CsaV3_1G017000	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G017000	Bottle gourd (USVL1VR-Ls)	cuclsiB033
CsaV3_1G017000	Melon (DHL92) v3.5.1	cucmeB014
CsaV3_1G017000	Melon (DHL92) v3.6.1	cucmedB025
CsaV3_1G017000	Watermelon (Charleston Gray)	cucwcgB024
CsaV3_1G017000	Watermelon (97103) v1	cucwmB057
CsaV3_1G017000	Watermelon (97103) v2	cucwmbB008
CsaV3_1G017000	Wax gourd	cucwgoB039
CsaV3_1G017000	Cucumber (Chinese Long) v3	cuccucB056
CsaV3_1G017000	Silver-seed gourd	carcucB0056
CsaV3_1G017000	Silver-seed gourd	carcucB1084
CsaV3_1G017000	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G017000	Cucumber (Gy14) v1	cgycucB290
CsaV3_1G017000	Cucurbita maxima (Rimu)	cmacucB0241
CsaV3_1G017000	Cucurbita maxima (Rimu)	cmacucB0255
CsaV3_1G017000	Cucurbita maxima (Rimu)	cmacucB0476
CsaV3_1G017000	Cucurbita moschata (Rifu)	cmocucB0228
CsaV3_1G017000	Cucurbita moschata (Rifu)	cmocucB0241
CsaV3_1G017000	Cucurbita moschata (Rifu)	cmocucB0459
CsaV3_1G017000	Cucurbita pepo (Zucchini)	cpecucB0021