CsaV3_1G015880 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGAAGGTTGTTTTGATAGTATACATATAGAATATCCGGACTTTTTACATTTATTTTATTTATGTAGCATAGAGATCACAGACACCAATCTTCCCAATTTTTGTTGAAACTAAACCCTCGAGTTCTTCAACATTTACGAATCAAGAGTCCTTCCAAACACCTCCCACCAAAAATCCCATTTATATCTATATATTGAATCCCATACATAGAAAGGAGAAAATAACCTATCTTTGTAATTATCAAAGGTAACCCACTATGAAATTTGAAAGCATGGCTCCCATCAATTGATTGGAAAATAATAATTAAAAAAAGCTTCAACGCATAACCCCTTCCTAAATCGCATACTTTGACCCATCTTTCAATCATAGATTGACTAAGAAAAATTATGTAAAGTTGGTGGAAGGAAGTGAATTTTATTATATATACACAATTAGATGCCAAAATACACAAAGATATTTAGATGCCACCGAAGTCTTTTCCTTTTATAATTTAGATCTTATAAACTGTGAAGTTTCTCATTGTTTACAAGATAGATCATCCATAATTGCCCTATAAAATCACACCTTGTTGGATCCTCAAACCCATATGAAAAATGGCTTTCCTTTCTACAAAATCAACCACATTCTTCTTCTTCTTCTTCTTCTTCATTTTAAGCATCTTTTCCATGGCAAATCCAGTGACCCAGATCCGGTCGTCGACTACTTGACATCCCCCCTTGACGCCATCATCAACGGCACTTTCTTCACCTTCACAGGCCTCCGCTCAGCTTTCACCGATTTCCCTTCAAATTTCAAACCCACAAAAGCCACCTTCTCCGAGTTCCCAGCCCTTCTCAGCCAGAGCGTCTCCATGGCCATCCTCCAGTACCCGGCTGGCTCCATCAACCCACCTCATTCCCACCCTCGCTCTGCCGAGCTTCTCCTTGTCGTCAGCGGCAGCCTCCAAGTTGGCTTTGTCGATACCGCCAACCAGTTCTTCAACCAGACCCTTCAAGTTGGGGACTTGTTTTTGTTCCCCAAAGGGTTGGTCCATTTCCAGCTCAATGTTGACCCTCGAAACTCTGCCACGGCCATCGCCACCTTCGCCAGTGCTAACCCTGGCACTGTGGCGTTGCCATCATCGACGGTGTTTACGAGTGGGATTAGTGATGAGGTTCTTGCTGAGGCGTTCAAGACTGATGTGGCTGTTATTCAAAGTATAAGGGCTGGCCTTACACCACCAAAGAGTTAGTGAATAAGTCACAGGTTTTGCCATATTAATTTGATGAATAATGTATTGATGTTT ATGCGAAGTGACCCAGATCCGGTCGTCGACTACTTGACATCCCCCCTTGACGCCATCATCAACGGCACTTTCTTCACCTTCACAGGCCTCCGCTCAGCTTTCACCGATTTCCCTTCAAATTTCAAACCCACAAAAGCCACCTTCTCCGAGTTCCCAGCCCTTCTCAGCCAGAGCGTCTCCATGGCCATCCTCCAGTACCCGGCTGGCTCCATCAACCCACCTCATTCCCACCCTCGCTCTGCCGAGCTTCTCCTTGTCGTCAGCGGCAGCCTCCAAGTTGGCTTTGTCGATACCGCCAACCAGTTCTTCAACCAGACCCTTCAAGTTGGGGACTTGTTTTTGTTCCCCAAAGGGTTGGTCCATTTCCAGCTCAATGTTGACCCTCGAAACTCTGCCACGGCCATCGCCACCTTCGCCAGTGCTAACCCTGGCACTGTGGCGTTGCCATCATCGACGGTGTTTACGAGTGGGATTAGTGATGAGGTTCTTGCTGAGGCGTTCAAGACTGATGTGGCTGTTATTCAAAGTATAAGGGCTGGCCTTACACCACCAAAGAGTTAG ATGCGAAGTGACCCAGATCCGGTCGTCGACTACTTGACATCCCCCCTTGACGCCATCATCAACGGCACTTTCTTCACCTTCACAGGCCTCCGCTCAGCTTTCACCGATTTCCCTTCAAATTTCAAACCCACAAAAGCCACCTTCTCCGAGTTCCCAGCCCTTCTCAGCCAGAGCGTCTCCATGGCCATCCTCCAGTACCCGGCTGGCTCCATCAACCCACCTCATTCCCACCCTCGCTCTGCCGAGCTTCTCCTTGTCGTCAGCGGCAGCCTCCAAGTTGGCTTTGTCGATACCGCCAACCAGTTCTTCAACCAGACCCTTCAAGTTGGGGACTTGTTTTTGTTCCCCAAAGGGTTGGTCCATTTCCAGCTCAATGTTGACCCTCGAAACTCTGCCACGGCCATCGCCACCTTCGCCAGTGCTAACCCTGGCACTGTGGCGTTGCCATCATCGACGGTGTTTACGAGTGGGATTAGTGATGAGGTTCTTGCTGAGGCGTTCAAGACTGATGTGGCTGTTATTCAAAGTATAAGGGCTGGCCTTACACCACCAAAGAGTTAG MRSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQSVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKGLVHFQLNVDPRNSATAIATFASANPGTVALPSSTVFTSGISDEVLAEAFKTDVAVIQSIRAGLTPPKS
BLAST of CsaV3_1G015880 vs. NCBI nr
Match: XP_004139583.1 (PREDICTED: putative germin-like protein 9-2 [Cucumis sativus] >KGN64945.1 hypothetical protein Csa_1G166250 [Cucumis sativus]) HSP 1 Score: 354.0 bits (907), Expect = 3.2e-94 Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. NCBI nr
Match: XP_008463986.1 (PREDICTED: germin-like protein 9-3 [Cucumis melo]) HSP 1 Score: 330.1 bits (845), Expect = 4.9e-87 Identity = 168/183 (91.80%), Postives = 175/183 (95.63%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. NCBI nr
Match: XP_022142670.1 (putative germin-like protein 9-2 [Momordica charantia]) HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62 Identity = 127/182 (69.78%), Postives = 151/182 (82.97%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. NCBI nr
Match: OVA10019.1 (Germin [Macleaya cordata]) HSP 1 Score: 231.5 bits (589), Expect = 2.4e-57 Identity = 113/186 (60.75%), Postives = 148/186 (79.57%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. NCBI nr
Match: XP_002515766.1 (germin-like protein 9-3 [Ricinus communis] >EEF46605.1 Nectarin-1 precursor, putative [Ricinus communis]) HSP 1 Score: 228.0 bits (580), Expect = 2.6e-56 Identity = 113/185 (61.08%), Postives = 147/185 (79.46%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. TAIR10
Match: AT3G04200.1 (RmlC-like cupins superfamily protein) HSP 1 Score: 112.5 bits (280), Expect = 2.9e-25 Identity = 76/202 (37.62%), Postives = 112/202 (55.45%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. TAIR10
Match: AT1G09560.1 (germin-like protein 5) HSP 1 Score: 112.1 bits (279), Expect = 3.8e-25 Identity = 61/144 (42.36%), Postives = 91/144 (63.19%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. TAIR10
Match: AT3G62020.1 (germin-like protein 10) HSP 1 Score: 111.7 bits (278), Expect = 4.9e-25 Identity = 63/180 (35.00%), Postives = 103/180 (57.22%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. TAIR10
Match: AT5G38960.1 (RmlC-like cupins superfamily protein) HSP 1 Score: 110.9 bits (276), Expect = 8.4e-25 Identity = 73/193 (37.82%), Postives = 109/193 (56.48%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. TAIR10
Match: AT1G18980.1 (RmlC-like cupins superfamily protein) HSP 1 Score: 110.2 bits (274), Expect = 1.4e-24 Identity = 71/193 (36.79%), Postives = 106/193 (54.92%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. Swiss-Prot
Match: sp|Q652Q0|GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0568600 PE=3 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 4.9e-46 Identity = 101/192 (52.60%), Postives = 128/192 (66.67%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. Swiss-Prot
Match: sp|Q652P9|GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0568700 PE=2 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.1e-45 Identity = 102/193 (52.85%), Postives = 128/193 (66.32%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. Swiss-Prot
Match: sp|Q652Q1|GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0568500 PE=2 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.4e-37 Identity = 87/187 (46.52%), Postives = 120/187 (64.17%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. Swiss-Prot
Match: sp|Q7F731|GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=GER4 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25 Identity = 67/168 (39.88%), Postives = 101/168 (60.12%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. Swiss-Prot
Match: sp|Q9S8P4|RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum OX=3888 GN=GER1 PE=1 SV=2) HSP 1 Score: 113.2 bits (282), Expect = 3.1e-24 Identity = 67/177 (37.85%), Postives = 95/177 (53.67%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. TrEMBL
Match: tr|A0A0A0LSQ3|A0A0A0LSQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G166250 PE=3 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 2.1e-94 Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. TrEMBL
Match: tr|A0A1S3CKF8|A0A1S3CKF8_CUCME (germin-like protein 9-3 OS=Cucumis melo OX=3656 GN=LOC103501975 PE=3 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 3.2e-87 Identity = 168/183 (91.80%), Postives = 175/183 (95.63%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. TrEMBL
Match: tr|A0A200QHW9|A0A200QHW9_9MAGN (Germin OS=Macleaya cordata OX=56857 GN=BVC80_1751g194 PE=3 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 1.6e-57 Identity = 113/186 (60.75%), Postives = 148/186 (79.57%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. TrEMBL
Match: tr|B9RPU7|B9RPU7_RICCO (Nectarin-1, putative OS=Ricinus communis OX=3988 GN=RCOM_1541080 PE=3 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 1.7e-56 Identity = 113/185 (61.08%), Postives = 147/185 (79.46%), Query Frame = 0
BLAST of CsaV3_1G015880 vs. TrEMBL
Match: tr|D7TCS5|D7TCS5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00730 PE=3 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.9e-55 Identity = 111/181 (61.33%), Postives = 141/181 (77.90%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |