CsaV3_1G015610 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G015610
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 11130358 .. 11130588 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGTCAATCTGTTGAAGGGTGAAATCCTGAAACACCTAGAGAAGTTCGAAAAGGTTGAAGTGGATGGTTGTGATGCAGAGTTGCTTTTAAATTTAAGTGAAATGGTTGAGAAGTTGATCATCGGTAGTGAAAACGTAGATGAATCAGCAACTATTGTTGAAGATCTTACATTTGTATGTCAGCCACTTCCATTTTGTGAGCAACAACCAACATCTCACATTGGTTAG

mRNA sequence

ATGAGGGTCAATCTGTTGAAGGGTGAAATCCTGAAACACCTAGAGAAGTTCGAAAAGGTTGAAGTGGATGGTTGTGATGCAGAGTTGCTTTTAAATTTAAGTGAAATGGTTGAGAAGTTGATCATCGGTAGTGAAAACGTAGATGAATCAGCAACTATTGTTGAAGATCTTACATTTGTATGTCAGCCACTTCCATTTTGTGAGCAACAACCAACATCTCACATTGGTTAG

Coding sequence (CDS)

ATGAGGGTCAATCTGTTGAAGGGTGAAATCCTGAAACACCTAGAGAAGTTCGAAAAGGTTGAAGTGGATGGTTGTGATGCAGAGTTGCTTTTAAATTTAAGTGAAATGGTTGAGAAGTTGATCATCGGTAGTGAAAACGTAGATGAATCAGCAACTATTGTTGAAGATCTTACATTTGTATGTCAGCCACTTCCATTTTGTGAGCAACAACCAACATCTCACATTGGTTAG

Protein sequence

MRVNLLKGEILKHLEKFEKVEVDGCDAELLLNLSEMVEKLIIGSENVDESATIVEDLTFVCQPLPFCEQQPTSHIG
Homology
[Close]
BLAST of CsaV3_1G015610 vs. NCBI nr
Match: KGN65006.1 (hypothetical protein Csa_1G177730 [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 1.5e-34
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MRVNLLKGEILKHLEKFEKVEVDGCDAELLLNLSEMVEKLIIGSENVDESATIVEDLTFV 60
          MRVNLLKGEILKHLEKFEKVEVDGCDAELLLNLSEMVEKLIIGSENVDESATIVEDLTFV
Sbjct: 1  MRVNLLKGEILKHLEKFEKVEVDGCDAELLLNLSEMVEKLIIGSENVDESATIVEDLTFV 60

Query: 61 CQPLPFCEQQPTSHIG 77
          CQPLPFCEQQPTSHIG
Sbjct: 61 CQPLPFCEQQPTSHIG 76

[Close]
BLAST of CsaV3_1G015610 vs. TrEMBL
Match: tr|A0A0A0LYJ4|A0A0A0LYJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G177730 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-34
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MRVNLLKGEILKHLEKFEKVEVDGCDAELLLNLSEMVEKLIIGSENVDESATIVEDLTFV 60
          MRVNLLKGEILKHLEKFEKVEVDGCDAELLLNLSEMVEKLIIGSENVDESATIVEDLTFV
Sbjct: 1  MRVNLLKGEILKHLEKFEKVEVDGCDAELLLNLSEMVEKLIIGSENVDESATIVEDLTFV 60

Query: 61 CQPLPFCEQQPTSHIG 77
          CQPLPFCEQQPTSHIG
Sbjct: 61 CQPLPFCEQQPTSHIG 76

The following BLAST results are available for this feature:
BLAST of CsaV3_1G015610 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65006.11.5e-34100.00hypothetical protein Csa_1G177730 [Cucumis sativus][more]
BLAST of CsaV3_1G015610 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G015610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G015610 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LYJ4|A0A0A0LYJ4_CUCSA1.0e-34100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G177730 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G015610.1CsaV3_1G015610.1mRNA