CsaV3_1G015420 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.GCATACCAGATGGCTTACATGATCCCAAATGGCATAACACCTTTCAAGCTCATATTCGATAAGTCGTGCCAATTCCTAGTTGAGATAGGACATAAAGCTTATTGGGCGGTCATGCAATGCAACCCAACTCTCGCACAAGCCAACAGAGACAAGGTTTCTTGA GCATACCAGATGGCTTACATGATCCCAAATGGCATAACACCTTTCAAGCTCATATTCGATAAGTCGTGCCAATTCCTAGTTGAGATAGGACATAAAGCTTATTGGGCGGTCATGCAATGCAACCCAACTCTCGCACAAGCCAACAGAGACAAGGTTTCTTGA GCATACCAGATGGCTTACATGATCCCAAATGGCATAACACCTTTCAAGCTCATATTCGATAAGTCGTGCCAATTCCTAGTTGAGATAGGACATAAAGCTTATTGGGCGGTCATGCAATGCAACCCAACTCTCGCACAAGCCAACAGAGACAAGGTTTCTTGA AYQMAYMIPNGITPFKLIFDKSCQFLVEIGHKAYWAVMQCNPTLAQANRDKVS
BLAST of CsaV3_1G015420 vs. NCBI nr
Match: XP_016185592.1 (uncharacterized protein LOC107627254 [Arachis ipaensis] >XP_025635951.1 uncharacterized protein LOC112730053 [Arachis hypogaea]) HSP 1 Score: 69.3 bits (168), Expect = 4.5e-09 Identity = 26/51 (50.98%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. NCBI nr
Match: XP_025661708.1 (uncharacterized protein LOC112757331 [Arachis hypogaea]) HSP 1 Score: 68.6 bits (166), Expect = 7.6e-09 Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. NCBI nr
Match: XP_020987557.1 (uncharacterized protein LOC110275689 [Arachis duranensis]) HSP 1 Score: 67.4 bits (163), Expect = 1.7e-08 Identity = 25/47 (53.19%), Postives = 37/47 (78.72%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. NCBI nr
Match: XP_017644156.1 (PREDICTED: uncharacterized protein LOC108484766 [Gossypium arboreum]) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-08 Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. NCBI nr
Match: XP_025652711.1 (uncharacterized protein LOC112748684 [Arachis hypogaea]) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-08 Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. TrEMBL
Match: tr|A0A1U8J171|A0A1U8J171_GOSHI (uncharacterized protein LOC107902419 OS=Gossypium hirsutum OX=3635 GN=LOC107902419 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.3e-08 Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. TrEMBL
Match: tr|A0A1U8PCF3|A0A1U8PCF3_GOSHI (uncharacterized protein LOC107957757 OS=Gossypium hirsutum OX=3635 GN=LOC107957757 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.1e-07 Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. TrEMBL
Match: tr|A0A2I0KKP6|A0A2I0KKP6_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_010557 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.1e-07 Identity = 25/51 (49.02%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. TrEMBL
Match: tr|A0A1U8N082|A0A1U8N082_GOSHI (uncharacterized protein LOC107943235 OS=Gossypium hirsutum OX=3635 GN=LOC107943235 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.6e-07 Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. TrEMBL
Match: tr|A0A1U8PY47|A0A1U8PY47_GOSHI (uncharacterized protein LOC107963228 OS=Gossypium hirsutum OX=3635 GN=LOC107963228 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 6.2e-07 Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |