CsaV3_1G015330 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G015330
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	F10K1.23
Location	chr1 : 10908495 .. 10913741 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGTTGAGAATTACTTGGAAAATTAGGCATCATTATCATTTCATATATATATAAACTCAATACCAATTTCGGATTTAGAAGAACAAAGCTTTCCCACCAATTATTAATTGATGTTCTGTTCATACTCTCTCTTTCTTTCGCGCCTCAGAAGCCGAAGGTTTGGTTTGGCTATTCACTCTCAACTCTTATCAAACTCATTTGATCCAATTTTCCATCCTTAATCTCCATTTATTATCACTTCTTACATTCTCTCTGATTCTTTACCGCTCAAGACTTCCACAGATTTGATGATTCTACTTTGCGAATTCTGGAATCATTTCCCGCTTCCAAAGACGCGACGTCGTTGATGGATGTTAATTCCAGCTTTAAAGAAGTTCTCAGATTTGAATCTCTATCTATCATTCGTGAAACCTCTGAGAAAACTGATGATCATAAGCTTCTAGTCATCGAATTTCTTGTTCGAGCTTTTGCCCTTGTTGGAGACATTGAGGTGATTATTTATTTACATAACTCTCTCTGATCGTTTTTTGTATCTGTGACCCTTCAGTTTTTCTTCTGTAATCGTTTATGAATTTCCTAGTTTTGGTGTCTGTACTCTATGCTAAACGATGAATTTGTTAGCAGATGTGAATGTTTCTCTATTGTTCTACTTATACTTTCATGCTTCTAGAGTTGCTTAGCTTTGAGATACGAGGCCTTGAATTTTCGGGTACTGAAGTCTTTCAATCAACCATGGCTTCAAGTATCACACGCAGAATGGTTAAACTTCGCTGAGCATTCATTGCATGCTGGCTTTTTTTCAATTTCCATAAAGGTAAGGTGATTTCTTTTATTTATGTAATTGCTTAAGATTTTTCTTTAACACTTCGGTATAGGATTCTGTCCAATAAAAGTTCTACATATTATGTCCTTCCAACCACTTATGTATCTACTAATTATGAGGATGTGAGATATGAAGTGAAACCAAATGCTTAATAAAAATGCATTTATCTTTTTGGAAATTAAGAATGCATATGAAGTGGAGAAGTTGATGTTTGCAGTATGCTGGTGCTATGAATAGTAGTTCTATGAAAAGCCTCGTCTGAAGAATTCATTAACAAGGAAAAAATAACTCAGCATAAACAGTGGCTAAGTTTTGCTGGTGATATGCTTGTTGTGGCTAAGTTCATAAGGAAAAGCTTTGTCAGTGATGGTGCTATGCAAATTGTGGGTAGGTTTCAAGAAAGAGAAAAGATTCATATATGGCAAGTTATTAAGTAGAGAAAATGATGGGTAAGGAGAGCCTTTGTCAGAATGTCTGTGAGTTAGTTTTCACATGGTTTGAATTGAAGAATATGCTCATGAAGAACATTGAAGAACATGCATATTTAGTAAACGCGAACAGAAAGATTATAATGGCTTACCTAGACTCGATACACTAATGTGGTAAGATTTATGTTTGAATGAGCACTACTGGGACATAATTAGAACAAGAACAATGCCATTGCTGCCAATAATCTTTCTACCATCCGCACAACTAGCTCAGTTTACATCGATGCATGGTAGGAGAGACAGTGATTGGGCTACGAAGACAATAAGGTAAGGGGAACATTGAAACAGCGGGGAAATTTGTTGTAGGAGCATTGAGGAATCTATGAATTGGTAACAGAAAACTGAGGTTTGGTAGAGTAAGAGTCTAACGCAAGACCCTAGAAATGAGCATGTCTTGTTAGATCACTACTGAACCAAAAAACTTAAGTTTATGGATTATGGAAAATGTAATTATATCAATACTTTAATACTTCCCCTTGTTTGTGGGTGTAGAAATTTGTAGACAACTGGGCAAGGGGAAATCAATATTAATTGAAGTGAAAATGACGTTGTATGGTTTGGAACTTTGAACATAGGACCTCCTGCCTTTTTACTATGTGTTAGATTATTATTCACTCCAGGCCTATCAACTTTTAGTTCTGGAGATTATTATTCTTTTTTATCTCGTGTCTTATTCTCTTATTGCAGCTCTAATTTATAGTACTCAGTTACTTTTCTCCTTCAATACAATGAAATTATGGTGAAGATTTAATTAGTCTCAATACGTATGACTTATTTACAGTTTTCTTTGGTAGGCATATGAGCAAGCGCTGTCAAGCCTTCAGCAGAGTGATACTGCAAACTACACATCACATGGTTCCTTTAAACGCACAGAAGTTATGGAGAAGATAAATAGACTCAAAGATCATGCTCTGAATTTAGCTGGTTCCCATTCTGGTAGGAATCTTAGTCGAGTTAAAAGATTTGATGATCAATTCAATCACTAGATTAGCTGTATGCTTTGGGTTCTAATTTGTTTAAGAACTAACTGTTTCACTTTATATTGAAGGCATTGCATCTGTTGATGATTGACTTTCATGGATAAGATTTTTTACTTCAAACTTCGTGCTTTTTGAATCCCTTGTTGTATCTTAACCAAACATCCAGTGCTTCCATCATAATATTATTTTCAAACGACTTGTTATTCATAAGGAGAAAAAAGAAAATAACCAAATACCTTCTATTTCTATTACATAATTTTAATAACTAATAATTTGGAATGTAGACAATCTTTTAGTCCAAATACCATCTGACTCCTTGATCATTGTGTCTTATTAAATCAGTTCAAGCTCTCACATCTGATTATTTGAAAAAGAAAGTAACTGAAAGGAACAGAAAGATTTCTTCATCCTGCACAAGAAAATTTACAGCGAGCACTCTATTCATAAATGGTATCAGAAACTACAATGCAAGAAAGCTGCATGAATATCGAAGTTTTGAAGGGGTTAACCAGGGTCGCACAAGATCCAGTTTTGTGATCAGACCTACATGTAGTCTCTCTTCATATCCATCTGACTAGATAAATGTTCAGGTTAGTTTTACACGCATGGGTGCATGAGTAACTTTTCCTCTTATCAGTGTAGTATTTCTTTAAACTTTTATATTCATTATATAATTTTATAATAATAGTAACTAGCGGATTTGAACTTTGATGGCATAGAACCGTAATTCACTTAACTTGCGCTTTAGGAGTAGGGTTAAAGTTGATGCTATGCATTTGTTCTTTAATCAATGCCAAGAGGGGGCTAGACTTTATTACTCGAGTGATGTAAATGATTGGTGAGACTGAGTTAAGTAGGAAAGGGCTGAGTAGTTTGGCGAGAGAATGAGTCTAAATGATATTTCTTCTCTCAATAGGTCGAGATAACTATATCTAAGAGGCTCTATTGAACTCCCCATGACTGTTTTTTCCCACATTTTTTTTGTAAGAGAAGTTACAAGCTATTGCGTTAAATTTTTGCAGCTGCTGCATGAATAGATTAAGTGTATGTTTGGATTGACTTTCAAAGAATTGAAAAAAGTGTTTATAAGTGCAGAAAAAGTGTTTGTAAACACTTAAATATCAATCCAAATGCACCATAAGGCATTATTCAAAAACCCATTATTGGTTCCCCATGCTCAAAGTATAGTTGCGGTCGCTAACTCTTCCACCCTGAATTTAACCTTTTATATCATAGACTGGTTAATGCTATGCAGCTTAGAAGTATGGACAATTTTGTTTGACTAGTGTGCCATGTTCGGATGATGTGTGTGCATCTGCAGGTAGATTGTAAAAGCAAAAGTACTTTTGGTATCAAATTGTGATTACCTAACGATTTCTCTTGTGCTAGATAAGTTTTTCATTTTATTTTCTTTATAAATTTGACTGGGATTGAGTCGATGTGGTTCATTGAAGCTTTTAATGTTTATTTTCTTCCTGTTATTTGACGCTTCTGAATTTGTGTGCTTCCTTTAGGCAATAGGTTAGTACTGGACAGTTTATCAAGAAGACCAACTTAACTCTGACTGCTGCAAACTTATTCTTTCTATTACAGGGAGTCGATCAGGGTGACTCGGGCGGCAAAAGAAAAAGTGTTTCTATATAATTCCAGTTGATCTCAGTTCTGTGCAAGTCCAAGTTGCTTCTCCCCGTCTGACAGGTTTGTATTATCAATACCCCACCCCACCCCAAATTCTTCATTTCTTCCTTTTTGTAAGAGTTCAATTTTTCAATACCACAAAATCTTTCATGTGGTAAAATCCACTTGGAGTTCACATGGAAGCCTGTAAATTCTTTCTCATTCCCTCTTTGAGACAAGAGAATGACGTGCTTATTTCATTTCCTTTTCATGCCATTAGTTGTTTGGAAACATTTCAGTGTTTTTTGTTTTGTTTTACTTCACCTCTCTGTGTAGACGTTGAACGTGAAACTTTGGTCCAATCAGAAATTGCCATATTATTTACTAAATTAGTGACAAAATTTTAAATAATTGAATTTGAGATTAATTAAATGTTCATATGTGTCTCCGATTCAAATCCAGACGTTCAAAGGAGATCACCAAAAGAACATGGAGACGGTTCTGGCAGAGCATTTTGAGCGAACCCACTACCATCAACCACCATCCTAGCAACTTCATTTCACCGAGATCTACAGAAATTCTTCTCTCGATCTCACAAATAAAAATAATAATGATGAAGGACATAATATCATAAAAGTATAGAAAGAAAATCGTGTCAATTTGAAGGTTTCCCCGGCCAACCAAGAAATGAACTTCAATTTCCAACAAATCGATCCCAATTGGAACAAGAAACTCTCAGATTTGCTCATTATCTCCACGATTCACATTAAAAAGAAAAAAAAGAGAAGAAACACAATCAATATATATACCTTCTTGAACCAAGTGCATCCCACGACCAAGAAATTTTGGAAGTTATATAAGAGCAAGTGAAACTCATATAACTGCCTTGCCTCTCTTGTGGCATTGTAGTCAAATTTCAACATTTTGCACGTCCATATTGCCTTATGCTCCAACTCTAATGGTAAATGACTGACTTTTCTGAAGACCAACGCACTGGAAGACATACTAATAGGTGTCTTATACACAGTCCTATATGCCTATAACGCCAAATTCATGTGATCGGTCGAGAAGTGTTGACCATTTTCTCCAGAATTTTCTTTATTTCTGTAATGGAGACTTCTGCCTGACCATCAGTTTGACAATGTTAGACTATGGTGACCTTGTGGTTGACATTGTATTTTAACAGCAGTTTAGCGATGATGTGATTGATAAAATGGAAACCTTCATGGCTCATGAGAGCTTGTGAAGTCTCAAATTGTGTATATACGTTCCTCTTCAAAAATTTGCTCATAATTATCGCATCATTTTTCACGCAAGAGATGGCTTCAACCCATTT

mRNA sequence

ATGTTCTGTTCATACTCTCTCTTTCTTTCGCGCCTCAGAAGCCGAAGATTTGATGATTCTACTTTGCGAATTCTGGAATCATTTCCCGCTTCCAAAGACGCGACGTCGTTGATGGATGTTAATTCCAGCTTTAAAGAAGTTCTCAGATTTGAATCTCTATCTATCATTCGTGAAACCTCTGAGAAAACTGATGATCATAAGCTTCTAGTCATCGAATTTCTTGTTCGAGCTTTTGCCCTTGTTGGAGACATTGAGAGTTGCTTAGCTTTGAGATACGAGGCCTTGAATTTTCGGGTACTGAAGTCTTTCAATCAACCATGGCTTCAAGTATCACACGCAGAATGGTTAAACTTCGCTGAGCATTCATTGCATGCTGGCTTTTTTTCAATTTCCATAAAGGCATATGAGCAAGCGCTGTCAAGCCTTCAGCAGAGTGATACTGCAAACTACACATCACATGGTTCCTTTAAACGCACAGAAGTTATGGAGAAGATAAATAGACTCAAAGATCATGCTCTGAATTTAGCTGGTTCCCATTCTGTTCAAGCTCTCACATCTGATTATTTGAAAAAGAAAGTAACTGAAAGGAACAGAAAGATTTCTTCATCCTGCACAAGAAAATTTACAGCGAGCACTCTATTCATAAATGGTATCAGAAACTACAATGCAAGAAAGCTGCATGAATATCGAAGTTTTGAAGGGGTTAACCAGGGTCGCACAAGATCCAGTTTTGTGATCAGACCTACATGTAGTCTCTCTTCATATCCATCTGACTAG

Coding sequence (CDS)

ATGTTCTGTTCATACTCTCTCTTTCTTTCGCGCCTCAGAAGCCGAAGATTTGATGATTCTACTTTGCGAATTCTGGAATCATTTCCCGCTTCCAAAGACGCGACGTCGTTGATGGATGTTAATTCCAGCTTTAAAGAAGTTCTCAGATTTGAATCTCTATCTATCATTCGTGAAACCTCTGAGAAAACTGATGATCATAAGCTTCTAGTCATCGAATTTCTTGTTCGAGCTTTTGCCCTTGTTGGAGACATTGAGAGTTGCTTAGCTTTGAGATACGAGGCCTTGAATTTTCGGGTACTGAAGTCTTTCAATCAACCATGGCTTCAAGTATCACACGCAGAATGGTTAAACTTCGCTGAGCATTCATTGCATGCTGGCTTTTTTTCAATTTCCATAAAGGCATATGAGCAAGCGCTGTCAAGCCTTCAGCAGAGTGATACTGCAAACTACACATCACATGGTTCCTTTAAACGCACAGAAGTTATGGAGAAGATAAATAGACTCAAAGATCATGCTCTGAATTTAGCTGGTTCCCATTCTGTTCAAGCTCTCACATCTGATTATTTGAAAAAGAAAGTAACTGAAAGGAACAGAAAGATTTCTTCATCCTGCACAAGAAAATTTACAGCGAGCACTCTATTCATAAATGGTATCAGAAACTACAATGCAAGAAAGCTGCATGAATATCGAAGTTTTGAAGGGGTTAACCAGGGTCGCACAAGATCCAGTTTTGTGATCAGACCTACATGTAGTCTCTCTTCATATCCATCTGACTAG

Protein sequence

MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHSVQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRTRSSFVIRPTCSLSSYPSD

Homology

[Close]

BLAST of CsaV3_1G015330 vs. NCBI nr
Match: XP_004139510.2 (PREDICTED: uncharacterized protein LOC101211584 isoform X1 [Cucumis sativus] >KGN64980.1 hypothetical protein Csa_1G171020 [Cucumis sativus])

HSP 1 Score: 501.1 bits (1289), Expect = 2.2e-138
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60
           MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS
Sbjct: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60

Query: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120
           EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE
Sbjct: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120

Query: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180
           HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS
Sbjct: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180

Query: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT 240
           VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT
Sbjct: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT 240

Query: 241 RSSFVIRPTCSLSSYPSD 259
           RSSFVIRPTCSLSSYPSD
Sbjct: 241 RSSFVIRPTCSLSSYPSD 258

[Close]

BLAST of CsaV3_1G015330 vs. NCBI nr
Match: XP_011654706.1 (PREDICTED: uncharacterized protein LOC101211584 isoform X2 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 9.7e-118
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 38  MDVNSSFKEVLRFESLSIIRETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNF 97
           MDVNSSFKEVLRFESLSIIRETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNF
Sbjct: 1   MDVNSSFKEVLRFESLSIIRETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNF 60

Query: 98  RVLKSFNQPWLQVSHAEWLNFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFK 157
           RVLKSFNQPWLQVSHAEWLNFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFK
Sbjct: 61  RVLKSFNQPWLQVSHAEWLNFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFK 120

Query: 158 RTEVMEKINRLKDHALNLAGSHSVQALTSDYLKKKVTERNRKISSSCTRKFTASTLFING 217
           RTEVMEKINRLKDHALNLAGSHSVQALTSDYLKKKVTERNRKISSSCTRKFTASTLFING
Sbjct: 121 RTEVMEKINRLKDHALNLAGSHSVQALTSDYLKKKVTERNRKISSSCTRKFTASTLFING 180

Query: 218 IRNYNARKLHEYRSFEGVNQGRTRSSFVIRPTCSLSSYPSD 259
           IRNYNARKLHEYRSFEGVNQGRTRSSFVIRPTCSLSSYPSD
Sbjct: 181 IRNYNARKLHEYRSFEGVNQGRTRSSFVIRPTCSLSSYPSD 221

[Close]

BLAST of CsaV3_1G015330 vs. NCBI nr
Match: XP_008464290.1 (PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_008464291.1 PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_008464292.1 PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_016903176.1 PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_016903177.1 PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_016903178.1 PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_016903179.1 PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo])

HSP 1 Score: 429.1 bits (1102), Expect = 1.1e-116
Identity = 222/237 (93.67%), Postives = 228/237 (96.20%), Query Frame = 0


Query: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60
           MFCSYSLFLSRLRSRRFDDSTLRILE FPASKDATSL DV SSF E+LRFESLSIIRET+
Sbjct: 1   MFCSYSLFLSRLRSRRFDDSTLRILELFPASKDATSLADVKSSFSELLRFESLSIIRETA 60

Query: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120
           EKTDD KLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE
Sbjct: 61  EKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120

Query: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180
           HSLHAGFFSI+IKAYEQALSSLQQSDTANYTSHGSFK TEV+EKINRLKDHALNL+GSHS
Sbjct: 121 HSLHAGFFSIAIKAYEQALSSLQQSDTANYTSHGSFKHTEVIEKINRLKDHALNLSGSHS 180

Query: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQ 238
           VQALTSDYLKKKVTER+RKISSSCTRKFTASTLF NGIRNYNARKLHEYRS  GVNQ
Sbjct: 181 VQALTSDYLKKKVTERSRKISSSCTRKFTASTLFRNGIRNYNARKLHEYRSIGGVNQ 237

[Close]

BLAST of CsaV3_1G015330 vs. NCBI nr
Match: XP_022970621.1 (uncharacterized protein LOC111469552 isoform X2 [Cucurbita maxima])

HSP 1 Score: 380.6 bits (976), Expect = 4.4e-102
Identity = 201/235 (85.53%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 5   YSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTD 64
           YSLF SRLRSRRFDDSTLRILE F ASKD    MDV S  KE+LRFESLSIIRET EKTD
Sbjct: 9   YSLFCSRLRSRRFDDSTLRILEFFSASKDTMYFMDVKSGVKELLRFESLSIIRETVEKTD 68

Query: 65  DHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLH 124
           D KLLVIEFLVRAFALVGDIESCLALRYEALNFR LKSFNQP LQVSHAEWLNFAEHSL+
Sbjct: 69  DQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWLNFAEHSLN 128

Query: 125 AGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHSVQAL 184
           AGFFSI+IKAYEQALSSLQQSDTANYTSHGS KR EV+EKI RLKDHAL  AGSHSVQAL
Sbjct: 129 AGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKRAEVIEKIKRLKDHALKSAGSHSVQAL 188

Query: 185 TSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGR 240
           TS+YLKKKVTERNRKISSSCTRKFTASTLF NGIRN+NA+KLHEY++ EG+   R
Sbjct: 189 TSEYLKKKVTERNRKISSSCTRKFTASTLFRNGIRNHNAKKLHEYQALEGLTSNR 243

[Close]

BLAST of CsaV3_1G015330 vs. NCBI nr
Match: XP_023520164.1 (uncharacterized protein LOC111783465 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.8 bits (974), Expect = 7.4e-102
Identity = 200/241 (82.99%), Postives = 214/241 (88.80%), Query Frame = 0


Query: 5   YSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTD 64
           YSLF SRLRSRRFDDSTLRILE F ASKD  SLMDV S  KE+LRFESLSIIRET +KTD
Sbjct: 9   YSLFCSRLRSRRFDDSTLRILEFFSASKDTMSLMDVKSGVKELLRFESLSIIRETVDKTD 68

Query: 65  DHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLH 124
           D KLLVIEFLVRAFALVGDIESCLALRYEALNFR LKSFNQP LQVSHAEWLNFAEHSL+
Sbjct: 69  DQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWLNFAEHSLN 128

Query: 125 AGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHSVQAL 184
           AGFFSI++KAYEQALSSLQQSDTANYTSHGS K  EV+EKI RLKDH+L  AGSHSVQAL
Sbjct: 129 AGFFSIAMKAYEQALSSLQQSDTANYTSHGSSKCAEVIEKIKRLKDHSLKSAGSHSVQAL 188

Query: 185 TSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRTRSSF 244
           TS+YLKKKVTERNRKISSSCTRKFTASTLF NGIRN+NA+KLHEY++ EG+   R    F
Sbjct: 189 TSEYLKKKVTERNRKISSSCTRKFTASTLFRNGIRNHNAKKLHEYQALEGLTSNRLLGLF 248

Query: 245 V 246
           +
Sbjct: 249 I 249

[Close]

BLAST of CsaV3_1G015330 vs. TAIR10
Match: AT1G07060.1 (unknown protein)

HSP 1 Score: 139.0 bits (349), Expect = 4.0e-33
Identity = 79/174 (45.40%), Postives = 111/174 (63.79%), Query Frame = 0


Query: 7   LFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTDDH 66
           LF++R++ RRFD+ +LRILE    + +  S ++V S  ++ +R ES+ I  E + ++   
Sbjct: 38  LFINRVQDRRFDEESLRILELSLVAMNVKSFLEVRSRLRDFMRSESVVIFGELTGESMVA 97

Query: 67  KLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLHAG 126
           KL V+EF  RAFAL+GD+ESCLA+RYEALN R LKS +  WL VSH+EW  FA  S+  G
Sbjct: 98  KLSVLEFFARAFALLGDMESCLAMRYEALNLRQLKSPSCLWLGVSHSEWTKFAVQSMENG 157

Query: 127 FFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 181
           F SI+ KA E AL SL++       S  +    +  EK+ RL+D A +L  SHS
Sbjct: 158 FPSIAGKASENALLSLKKDSLIEPKSEDNSDILDAAEKVRRLRDSAASLTSSHS 211

[Close]

BLAST of CsaV3_1G015330 vs. TrEMBL
Match: tr|A0A0A0LSV1|A0A0A0LSV1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G171020 PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 1.5e-138
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60
           MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS
Sbjct: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60

Query: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120
           EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE
Sbjct: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120

Query: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180
           HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS
Sbjct: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180

Query: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT 240
           VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT
Sbjct: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT 240

Query: 241 RSSFVIRPTCSLSSYPSD 259
           RSSFVIRPTCSLSSYPSD
Sbjct: 241 RSSFVIRPTCSLSSYPSD 258

[Close]

BLAST of CsaV3_1G015330 vs. TrEMBL
Match: tr|A0A1S3CL48|A0A1S3CL48_CUCME (uncharacterized protein LOC103502216 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502216 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 7.1e-117
Identity = 222/237 (93.67%), Postives = 228/237 (96.20%), Query Frame = 0


Query: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60
           MFCSYSLFLSRLRSRRFDDSTLRILE FPASKDATSL DV SSF E+LRFESLSIIRET+
Sbjct: 1   MFCSYSLFLSRLRSRRFDDSTLRILELFPASKDATSLADVKSSFSELLRFESLSIIRETA 60

Query: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120
           EKTDD KLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE
Sbjct: 61  EKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120

Query: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180
           HSLHAGFFSI+IKAYEQALSSLQQSDTANYTSHGSFK TEV+EKINRLKDHALNL+GSHS
Sbjct: 121 HSLHAGFFSIAIKAYEQALSSLQQSDTANYTSHGSFKHTEVIEKINRLKDHALNLSGSHS 180

Query: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQ 238
           VQALTSDYLKKKVTER+RKISSSCTRKFTASTLF NGIRNYNARKLHEYRS  GVNQ
Sbjct: 181 VQALTSDYLKKKVTERSRKISSSCTRKFTASTLFRNGIRNYNARKLHEYRSIGGVNQ 237

[Close]

BLAST of CsaV3_1G015330 vs. TrEMBL
Match: tr|A0A1S3CL50|A0A1S3CL50_CUCME (uncharacterized protein LOC103502216 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502216 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.1e-80
Identity = 175/237 (73.84%), Postives = 180/237 (75.95%), Query Frame = 0


Query: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60
           MFCSYSLFLSRLRSRRFDDSTLRILE FPASKDATSL DV SSF E+LRFESLSIIRET+
Sbjct: 1   MFCSYSLFLSRLRSRRFDDSTLRILELFPASKDATSLADVKSSFSELLRFESLSIIRETA 60

Query: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120
           EKTDD KLLVIEFLVRAFALVGDIE                                   
Sbjct: 61  EKTDDQKLLVIEFLVRAFALVGDIE----------------------------------- 120

Query: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180
                        AYEQALSSLQQSDTANYTSHGSFK TEV+EKINRLKDHALNL+GSHS
Sbjct: 121 -------------AYEQALSSLQQSDTANYTSHGSFKHTEVIEKINRLKDHALNLSGSHS 180

Query: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQ 238
           VQALTSDYLKKKVTER+RKISSSCTRKFTASTLF NGIRNYNARKLHEYRS  GVNQ
Sbjct: 181 VQALTSDYLKKKVTERSRKISSSCTRKFTASTLFRNGIRNYNARKLHEYRSIGGVNQ 189

[Close]

BLAST of CsaV3_1G015330 vs. TrEMBL
Match: tr|F6GUL6|F6GUL6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g07190 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.6e-52
Identity = 119/229 (51.97%), Postives = 157/229 (68.56%), Query Frame = 0


Query: 5   YSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTD 64
           +SLF S+++SRRFDD TLRILES   SKD  S ++V SS +E +R ESLS+IRE +EK  
Sbjct: 23  FSLFRSQIKSRRFDDGTLRILESVLVSKDVRSFLEVRSSLREFMRSESLSVIREIAEKNV 82

Query: 65  DHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLH 124
           +HK+L+++F VRAFAL GD+ESCLALRYEAL  R LKS +  WLQVSH EWL FAE +L 
Sbjct: 83  EHKILILDFFVRAFALAGDVESCLALRYEALVLRELKSTSYQWLQVSHIEWLTFAEQALD 142

Query: 125 AGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHSVQAL 184
            GF+S++ KA E AL SLQ +D A + +       +++EKI RLKD AL    S SVQA 
Sbjct: 143 NGFYSVAAKACENALLSLQMNDIAEHRADELSGNVQIIEKIKRLKDVALASVVSLSVQAQ 202

Query: 185 TSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFE 234
            +++LKKK  +  +    +      ASTLF +GI+  NARKL E++  +
Sbjct: 203 ATEHLKKKNQKSKKNFLFNKGAHCLASTLFTSGIKKQNARKLLEHQRLQ 251

[Close]

BLAST of CsaV3_1G015330 vs. TrEMBL
Match: tr|A0A251NKC9|A0A251NKC9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G050500 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.5e-50
Identity = 122/248 (49.19%), Postives = 161/248 (64.92%), Query Frame = 0


Query: 7   LFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTDDH 66
           +F S + ++RFDD+TLR+LES   SKD  S ++V S  ++ LR ESLS++RE SEK+   
Sbjct: 4   IFHSLVLNKRFDDATLRVLESALVSKDVKSSIEVRSGLRQFLRSESLSVLREISEKSAGE 63

Query: 67  KLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLHAG 126
           KLLV+EFLVR+FALVGD+ESCLALRYEAL  R LKS   PWLQV + EWLNFA  S  +G
Sbjct: 64  KLLVLEFLVRSFALVGDVESCLALRYEALLLRDLKSATNPWLQVPYTEWLNFAHQSKDSG 123

Query: 127 FFSISIKAYEQALSSLQ---------------QSDTANYTSHGSFKRTEVMEKINRLKDH 186
           F+S++ +A E AL   +               +  T +  + G  +  +V+E+I RLKD 
Sbjct: 124 FYSVAGRACENALVCFKRKCAQDPKTDEVYVTKKSTEDAKADGVLENVQVIEQIKRLKDC 183

Query: 187 ALNLAGSHSVQALTSDYLKKKVTERNRKISSSC-TRKFTASTLFINGIRNYNARKLHEYR 239
           A+  A SHSVQA T+DYLKK++ E++   SS C   K  ASTLF NGI+  N RKL+E R
Sbjct: 184 AMASASSHSVQAQTADYLKKRLKEKSMDCSSVCKDTKPVASTLFRNGIKKRNLRKLNESR 243

The following BLAST results are available for this feature:

BLAST of CsaV3_1G015330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139510.2	2.2e-138	100.00	PREDICTED: uncharacterized protein LOC101211584 isoform X1 [Cucumis sativus] >KG...	[more]
XP_011654706.1	9.7e-118	100.00	PREDICTED: uncharacterized protein LOC101211584 isoform X2 [Cucumis sativus]	[more]
XP_008464290.1	1.1e-116	93.67	PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_022970621.1	4.4e-102	85.53	uncharacterized protein LOC111469552 isoform X2 [Cucurbita maxima]	[more]
XP_023520164.1	7.4e-102	82.99	uncharacterized protein LOC111783465 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_1G015330 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07060.1	4.0e-33	45.40	unknown protein	[more]

BLAST of CsaV3_1G015330 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G015330 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LSV1\|A0A0A0LSV1_CUCSA	1.5e-138	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G171020 PE=4 SV=1	[more]
tr\|A0A1S3CL48\|A0A1S3CL48_CUCME	7.1e-117	93.67	uncharacterized protein LOC103502216 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CL50\|A0A1S3CL50_CUCME	1.1e-80	73.84	uncharacterized protein LOC103502216 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|F6GUL6\|F6GUL6_VITVI	1.6e-52	51.97	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g07190 PE=4 SV=...	[more]
tr\|A0A251NKC9\|A0A251NKC9_PRUPE	1.5e-50	49.19	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G050500 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G015330.1	CsaV3_1G015330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37176	FAMILY NOT NAMED	coord: 5..232

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G015330	CSPI01G15200	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G015330	Cucsa.319510	Cucumber (Gy14) v1	cgycucB496
CsaV3_1G015330	CsGy1G014970	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G015330	MELO3C026086	Melon (DHL92) v3.5.1	cucmeB016
CsaV3_1G015330	MELO3C026086.2	Melon (DHL92) v3.6.1	cucmedB015

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G015330	Cucumber (Chinese Long) v3	cuccucB053
CsaV3_1G015330	Cucurbita maxima (Rimu)	cmacucB0253
CsaV3_1G015330	Cucurbita maxima (Rimu)	cmacucB0476
CsaV3_1G015330	Cucurbita maxima (Rimu)	cmacucB1004
CsaV3_1G015330	Cucurbita moschata (Rifu)	cmocucB0239
CsaV3_1G015330	Cucurbita moschata (Rifu)	cmocucB0472
CsaV3_1G015330	Cucurbita pepo (Zucchini)	cpecucB0003
CsaV3_1G015330	Cucurbita pepo (Zucchini)	cpecucB0632
CsaV3_1G015330	Wild cucumber (PI 183967)	cpicucB318
CsaV3_1G015330	Bottle gourd (USVL1VR-Ls)	cuclsiB017
CsaV3_1G015330	Bottle gourd (USVL1VR-Ls)	cuclsiB033
CsaV3_1G015330	Melon (DHL92) v3.5.1	cucmeB029
CsaV3_1G015330	Melon (DHL92) v3.6.1	cucmedB025
CsaV3_1G015330	Watermelon (Charleston Gray)	cucwcgB024
CsaV3_1G015330	Watermelon (Charleston Gray)	cucwcgB029
CsaV3_1G015330	Watermelon (97103) v1	cucwmB049
CsaV3_1G015330	Watermelon (97103) v1	cucwmB064
CsaV3_1G015330	Watermelon (97103) v2	cucwmbB008
CsaV3_1G015330	Wax gourd	cucwgoB039