CsaV3_1G015230 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTACAAGAGATGCGATTTCTTGGACGGCTTTAATTAACGGTCTTTTGAAACATGGTTACTCGGAACAAGCATTGGAGTGCTTCCATCAGATGCAACGCTCGGGTGTCGCTGCTGATTATGTGTCTATAATTGCTGTTCTTGCTGCCTGTGCTGATTTGGGTGCTCTTACTTTGGGGTTGTGG ATGCCTACAAGAGATGCGATTTCTTGGACGGCTTTAATTAACGGTCTTTTGAAACATGGTTACTCGGAACAAGCATTGGAGTGCTTCCATCAGATGCAACGCTCGGGTGTCGCTGCTGATTATGTGTCTATAATTGCTGTTCTTGCTGCCTGTGCTGATTTGGGTGCTCTTACTTTGGGGTTGTGG ATGCCTACAAGAGATGCGATTTCTTGGACGGCTTTAATTAACGGTCTTTTGAAACATGGTTACTCGGAACAAGCATTGGAGTGCTTCCATCAGATGCAACGCTCGGGTGTCGCTGCTGATTATGTGTCTATAATTGCTGTTCTTGCTGCCTGTGCTGATTTGGGTGCTCTTACTTTGGGGTTGTGG MPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGALTLGLW
BLAST of CsaV3_1G015230 vs. NCBI nr
Match: PQQ12257.1 (pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora]) HSP 1 Score: 87.4 bits (215), Expect = 1.8e-14 Identity = 42/62 (67.74%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. NCBI nr
Match: EMS59351.1 (hypothetical protein TRIUR3_09072 [Triticum urartu]) HSP 1 Score: 78.2 bits (191), Expect = 1.1e-11 Identity = 32/62 (51.61%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. NCBI nr
Match: BAK01831.1 (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 78.2 bits (191), Expect = 1.1e-11 Identity = 32/62 (51.61%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. NCBI nr
Match: XP_021823171.1 (putative F-box/LRR-repeat protein 23 [Prunus avium]) HSP 1 Score: 75.9 bits (185), Expect = 5.5e-11 Identity = 37/61 (60.66%), Postives = 44/61 (72.13%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. NCBI nr
Match: PKA53440.1 (Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]) HSP 1 Score: 75.5 bits (184), Expect = 7.2e-11 Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. TAIR10
Match: AT1G13410.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 62.0 bits (149), Expect = 1.5e-10 Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. TAIR10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 60.5 bits (145), Expect = 4.3e-10 Identity = 25/60 (41.67%), Postives = 42/60 (70.00%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. TAIR10
Match: AT2G33760.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 60.1 bits (144), Expect = 5.7e-10 Identity = 22/62 (35.48%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. TAIR10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 60.1 bits (144), Expect = 5.7e-10 Identity = 26/60 (43.33%), Postives = 42/60 (70.00%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. TAIR10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 58.5 bits (140), Expect = 1.6e-09 Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. Swiss-Prot
Match: sp|A8MQA3|PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 7.8e-09 Identity = 25/60 (41.67%), Postives = 42/60 (70.00%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. Swiss-Prot
Match: sp|Q9SI53|PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.0e-08 Identity = 26/60 (43.33%), Postives = 42/60 (70.00%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. Swiss-Prot
Match: sp|P93011|PP182_ARATH (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H6 PE=3 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.0e-08 Identity = 22/62 (35.48%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. Swiss-Prot
Match: sp|Q9SUH6|PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 3.0e-08 Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. Swiss-Prot
Match: sp|Q5G1T1|PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 5.1e-08 Identity = 25/60 (41.67%), Postives = 41/60 (68.33%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. TrEMBL
Match: tr|M7ZI79|M7ZI79_TRIUA (Uncharacterized protein OS=Triticum urartu OX=4572 GN=TRIUR3_09072 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 7.3e-12 Identity = 32/62 (51.61%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. TrEMBL
Match: tr|A0A287UVB4|A0A287UVB4_HORVV (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 7.3e-12 Identity = 32/62 (51.61%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. TrEMBL
Match: tr|F2E3A9|F2E3A9_HORVV (Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 7.3e-12 Identity = 32/62 (51.61%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. TrEMBL
Match: tr|A0A1D6ATP7|A0A1D6ATP7_WHEAT (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-11 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of CsaV3_1G015230 vs. TrEMBL
Match: tr|M8BH93|M8BH93_AEGTA (Uncharacterized protein OS=Aegilops tauschii OX=37682 GN=F775_21240 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.1e-11 Identity = 31/62 (50.00%), Postives = 47/62 (75.81%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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