CsaV3_1G015030 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATTTTTGCAATAGCTTGTTTAGAAGATGTGTACGGTTTTGTCAATTTCCGAACTAGTTTTGAGAAATGGAATCATTTCCGAAGTATTTTTAAAATGATTTTTGAGAAAGATATTTTGGTTCGAGGAAGCAAACCAGGATTGTGGTGCTCGGATAAGCCATGGAAACTCTTTCTATGGTGACATGCTTTACCGGCAAGCAGATTACACCTCCTTCCAGATTCCTTTCTCGTACATTTACTTCATTACCCCATTTCCAGAAATCAAAGCCAATTCGCGCAGGTCAGTTCTCGTATACTTCTTTCACATTGTTATCTTGCTTTTCCATTGGAACTGTGAAGAGCTTAAGAACGCCAACTTAGAATCGAAGTTAGGACTCATTATTCGAAATTTTGGTTTCTGGATAGATTTGATAGAAGACTGTTCTGTTTCTTCAATTAGAGGAAGACTATAACGGGGAAGTTTGAACGTTTTTCGACTAGGACGCCACTTATCATTTTGATAAGAAATTGACCACTTTATGCTTAGTTCGAACGTAGAATAGGGAATTAATAGCTTAATGGGTACCCCTGTAACTCAGCTTTCGTTGATCCCAACTTCAAGGACTCTAGCATGTGAAAAGCTATATTTAAGTAAGCCTTTATTTGAGTTGTTGGCGTATTCTAGTTTATATCAGATAAAACCACTTATTAATTTACTAACACATTATCCTCTTCTCTTGGCTTTGTATTGTCGACACAATGCTTGGGGCATGCACTTCCAATAGCAGTTTTTTTTTTTTTTTTTTTCTACAAGTAATTTGTTGTTGTTATTTTCTGGCTGTCTATTCCAGTGCTCTTAACTTTAAGTTGGATGACTACCACATGCTGACCTACAACGTTTCTTGTTTTTCAGTAAGTGAAATTGCTGAGGAGGATGTTCTACAAGCATTCTTTGAGGAACGGAAGCTAAATTCGGATTTTATATCAAAAACTTCTGATATGCTGTGGCAGAGGGCAGTCTTGAAATTTGAAGATGTCACTGACGACAGATTTATGGATACTTCTCAAGGACTGGTACAATATGCTTAGTCTTTTAATGCTCAATCTCAATTTTCAATTTATGGGATGACTATGCATGAAATTTATATGTTTCTACAATATTGAACGGACATAGTTGTATGGTCACTTTAGTACCCCTAGTAGCATTTTTTTCCTGTAGCATTATGATAGTCAAAACAGTCCAACTTAGTATAAGTAGATAAAAAACATGCAACATGCCAAGTTAGGTGAAAAAAAATGTGTTTGTGGTCCATGCTCATAGAAATTTCCAAGAAGTTGAACAAATAACACCAAAATGTTCTACTCAAGAATTGTTTGTAAAACATCTTATTGGAGGGGTTATTAGAGGTGGATATGGTAGAAGGAAAAAACACTGAATATGAGTTTCCACTTTACTTTTGAAATCAACTTTTTTCTTGATTTTTTGAAAAATCTGAAAAGAGCAGTCAAGAGCAAGAAAGATATTTCTATTTGCATTAGATCATAGATGTACTGTACATTACACAAAATTGGTGACTCTCAGATAACTTTGAGGTCGTTTCTAACTTTTGGAAAACTAAACTATATTTTGAATGGTTATGACAATAACTAAAATTCTGGTCAGCTTCTTTTATCTTCTTCAGAGGATCAGGCAAACTCTTGTTTCTTTTCCCTTAATGCTTGATTTACGACTCGTAGGTTGATGACAACGATGATGATGGTGGGTTTTTGAAATTGTCTGTTACTCAAAAATGGATCTCGGGTGGTAATTCTGCACCAATCAATAAAAAAGCTGGTAATAAGGTGAGCTACTCCAGTTCTTACATGTTTTGTAAGGTAATAAGGTCACACGAGCATCGGTCTCAGGTGGTAGTTACAGAAGTCATTTTATGTTTTGTTTTTATGAACAACCAGTTTAATTGGTCTGGATCAGTTGCCAGATAAGACCAATGATTGATGCTTTCGTAGTAGACTGATTTTCTCTAATTCCTCTATTTTCTTTAACAGATACTGTCAGATGACCGTGAAAGAAAGAAGAAACTAAATTTTCTCAAATATGAAGCGGTATGATGCTTAAACACAGTATGTTCATTGGTTTAATTTTTACTTCGTATCAGACCATCTTGATATAAAATTTGATCTCTGCACTTCATTCACTAAACTTATCCAAAATCAGTTTTTCATTCTTTTTCTTTCAATGTTTGTACATATATGCATGGGTCACAAAATAAGTTGGGGCTGGATTGGATTGGGGCCTGCAAAATGAAGGCTCTCAACCCTCAACCTCATTATATTTTTAATAACTGATTGAAGGAAATTTAAATAATTTTTTAAAATGGAAATCATTGATATATTGGTCATTAATAACTCTACATAAATAATTGGAAATTATTTTAAATGACAAAACGATTGAAAATATTTACAAATACAACAAAATTTCATAGTCTATCAGTGTCATCAATATTTATCAATGATATTTTGTTGTATTTGTAATATGTTGGTTCACTTTTCCATATTTGAAAGCAACCCTAAATAATATTCATTGTGTAATGTGAATGGATAATATAAAATATTTTAGATCTCAAGTGAAGGATTCAAGGCCCATAGCAGCTCCTCGACAAAGGTCATGATTTTAATGGAAATCAATGATAAGTCATTAATAATTCTACAGAATATTCATTATGAATATTTCAAAATTGATTTTGAAAAAGCTTATGACCACTTGGATTGGAATTTCTTGGATAAGATTTGGGAAAGTTTTTGGGTACAAATGGAAGATGTGGATGTGGAGATGTACGAGAATCGTGTATTCCTTCCTTAATAATGGTTGCCTAAGGCCCAAGGACAAGGTTTTGGCCTCAAGAAGTCTTAGATAGGGAGACCTTTTGTCCCCCTTTCGTTTGCTTGTTGTGATTGTGCTAAGTAGGCTTGTCTCTAGGAGTGTTGGAGGAAAAACAATGATCCCATTGAATGGGAACTGTTGTTCAATGGAGGGTTGTACCTGAGCACAAAACTACATGGGAAAGCTACGATCACTTTCACAACCAATTTCCTAAACTCCACATTAAGATCTAGGTGTCTCTCATTCTCAGGGTATTGTTAGGCCTTCAATGGTAAATACTTATGTGAGGAAGGAAAAACGGGCAATTCACCTCAATAACTGGCTTTTATGTCCTTTATGTTAGTTAATCTTTAAGCAAAGTTATGTTTGTGTGTTGAGTCAAGTTATACTTTGTGTAGACTCTGTGGTTAGTGAAGAACAGTTGGGAGATTGCCACCTACTCCAATTGGTCGAAGTGTTTATGTTGTATTTTGTTGAAAGATATTGATATATCAAGGAAGAACCTCTTAGACCCAAAATACATAGATCAAAATGGTACTTTAACATAAAAATTTCTTGAAGTTCATTTAATAATTTGTTAGTTGACTGTTGACCTTGAAATTTCTTGAACCTTTTAGACCCAAAATACATGTAAACATGCTTTACTTGCATACCTATTGGTGTATAGATTCTTCCATTTTATGTTTCTATTTCAATTCACGTGGAAATGAAATTTCGCTCCCTAACCTACTGTGGTTTTGGGCGTTGATGATATGGGATGTTAAAGTGCTCCCTTATTGAATCTCTGCATGTAAAGATTTTTCTCCCCTTCCTTTTTCATTTTGGGCTGTTTTCAAATATAGCAAAATGAATCAAAATAATTATCTATCAATGATAGATCATAGATTCTAAAACTTTGTTATATTTTGTAAATATCTTAAGTAGATTTGCCATTTGAAATAATTTCCCTTTCATTTTCTATAATTATTTTTTGGCTACATTATGAAACTCCAGAATAGTTTATAATGGCTCAAAATGATGTTTAAAAAATTTGGAAGTTAATTATTAATTTCTTTTAACACAGCTCAAGAGGGAACTAATGCTTTTATCTGTTGGCATTGGAACTGCATGCAGTGGGTATTGCCTGATAGTATTTTCGTTCCAGGTATATTTTCATTGAAGAAGAAAGGGAATTGTCTTGTGTGCTACAGTAAATTTGTTTGAGTTGATTTACGATTCTTTAGTACAAGGAAGTAGAAATGGCATGATGTAGTTTTTGATTTAATACATTCTTCCATTGGGAGTAACAATTATAGGTTGGAGTCAAGTTATAACATAAGGTACTTACAATGTTGACTCCAGTGTCTATATCATTAACATTTATTACCTTAAGTCATCTCATTTTTTTTCAAGTGACAGCTCACTTTCTCTAAACATGACTCACGTCTTGAGTGGAGAATGCTTGCTGATGAATTTTTTTATTTGTTTTTGCTGTTCAGGCTGCCATTAGTTATGCAGTAGGAGTCCTTTCGAGGTTGGTTGATATGAGTTTAATGATGCTGTTACTTTGAAACTTCATTTTGATGTGCTATGTTTCACCACCACGAGTTAGATTTTCATTCCAAAATTTGAAGTTTTCAGGCAAGATTTTTGGTCAGGATGGAATACTAAATATTAATTAACAGGACTCGTTTGAAACAGTTTCTTGGAGAAGTTTGTAAGAGTCAAAGTGAGCTTTAGTCAAATCAATTTTTGCCTTCTACGGAGAAAATAAAAAAGTAGCGTCCGTTCTTGATTTGTAATTAGGTTGGCTTTAGCTCCAATACTTCTCTCCTTCAATAACTAATGGGATTACATCTAATGCAGCTGCTTATACCTCCAGCTATTATATCAGCACGCTGACAAACTATCCAAAGACATGATTCCTGATATTTTCACTCAGAAAAAGACAAAAAAGTATGAACAAATCCCATAGTCGATCTAGTTGTTTATTGTGTATAACTTGTTTGTATCATCATTCATTCCTTATACCAGGATTGGAATAAGAAGTGAAGATATCAAGAACGTGGTTGAGAAATTAGTGAAGGGAAGTGGCGTTGCCCTTTCATCTCCTAGGCTTATGATTCCTGCGGCAATATATGCATTATGGATTCTCTCCCATAAGTTTCTTGCCAACGACTTCTTCGACTTCCAGGTAACAAAAAACTACATTTTAATTTTAAAAAGATGGAAATTTGAACTTTTGACCATTTGGTTGAAGAATATAGTGTCCTAACCAATTAAGCTGTGCTCAAGTTAAAAAGACTATCCTTATTGCATTCGAAAAACCTTTATTTTAGATGGAAGCTTATAGCCCTGGACATTACGCACTCATGTGTTGTCGTGATTTTCTTCCTGTGTTTAGCTTACGCCAGCTATGCTTGGGATGTTTGTCTATAAAGCAGCTGCACTTGTTCAAGTTTATAGGGAGAATGAAAACTTGAGATTGGTCTTTCCAGAAAATGATGGAGATTCGACATGACTGGACCGCTCAAATTTTGAAGTAAAAAACTGATCCACCCACATTGATGAAGCAACTGTTGGTTGTGTTAAGTATTTGGGACTAAGTACTATGCCATTTCATGTTTGTTTGGTTGATTTTTTTCTTCTTCAATTAACAACCCATTTGATCCTATAATACATGGGTGCCAAAAAAACTCATAGAAAATTAATTTCTAGGTAGGTGGTTACCAGGTATTGAATACACGACCCCTTAATTACTGCAACTGTCTGTTTTTTTACTACTAGGCTAGCCGTTTTGTCAAAAGAAGATATGGCCTGCCATGTTTATGCCATTACTGAACCTCAGTTATTCTTGTAGTGGGTGGGTCATTTTAAGTTTAATCTATAGGTCAGGGATTGATACGTTTTATGAGTTACTAATATTTTTTTAGGGTCTGGATACATGGGGAAGGAGTTGCTTGGTAGCTCTTTTAAATGTATCACTCTTAAATCTGTTTATAGGAAACAAGATATTCTCAATAAAAGCTAAATGTATTTTTTTTGTTGTATGTTAATATTTATGGTTTTTTTTTCTGGTTAA ATGGAAACTCTTTCTATGGTGACATGCTTTACCGGCAAGCAGATTACACCTCCTTCCAGATTCCTTTCTCGTACATTTACTTCATTACCCCATTTCCAGAAATCAAAGCCAATTCGCGCAGTAAGTGAAATTGCTGAGGAGGATGTTCTACAAGCATTCTTTGAGGAACGGAAGCTAAATTCGGATTTTATATCAAAAACTTCTGATATGCTGTGGCAGAGGGCAGTCTTGAAATTTGAAGATGTCACTGACGACAGATTTATGGATACTTCTCAAGGACTGGTTGATGACAACGATGATGATGGTGGGTTTTTGAAATTGTCTGTTACTCAAAAATGGATCTCGGGTGGTAATTCTGCACCAATCAATAAAAAAGCTGGTAATAAGATACTGTCAGATGACCGTGAAAGAAAGAAGAAACTAAATTTTCTCAAATATGAAGCGCTCAAGAGGGAACTAATGCTTTTATCTGTTGGCATTGGAACTGCATGCAGTGGGTATTGCCTGATAGTATTTTCGTTCCAGGCTGCCATTAGTTATGCAGTAGGAGTCCTTTCGAGCTGCTTATACCTCCAGCTATTATATCAGCACGCTGACAAACTATCCAAAGACATGATTCCTGATATTTTCACTCAGAAAAAGACAAAAAAGATTGGAATAAGAAGTGAAGATATCAAGAACGTGGTTGAGAAATTAGTGAAGGGAAGTGGCGTTGCCCTTTCATCTCCTAGGCTTATGATTCCTGCGGCAATATATGCATTATGGATTCTCTCCCATAAGTTTCTTGCCAACGACTTCTTCGACTTCCAGCTTACGCCAGCTATGCTTGGGATGTTTGTCTATAAAGCAGCTGCACTTGTTCAAGTTTATAGGGAGAATGAAAACTTGAGATTGGTCTTTCCAGAAAATGATGGAGATTCGACATGA ATGGAAACTCTTTCTATGGTGACATGCTTTACCGGCAAGCAGATTACACCTCCTTCCAGATTCCTTTCTCGTACATTTACTTCATTACCCCATTTCCAGAAATCAAAGCCAATTCGCGCAGTAAGTGAAATTGCTGAGGAGGATGTTCTACAAGCATTCTTTGAGGAACGGAAGCTAAATTCGGATTTTATATCAAAAACTTCTGATATGCTGTGGCAGAGGGCAGTCTTGAAATTTGAAGATGTCACTGACGACAGATTTATGGATACTTCTCAAGGACTGGTTGATGACAACGATGATGATGGTGGGTTTTTGAAATTGTCTGTTACTCAAAAATGGATCTCGGGTGGTAATTCTGCACCAATCAATAAAAAAGCTGGTAATAAGATACTGTCAGATGACCGTGAAAGAAAGAAGAAACTAAATTTTCTCAAATATGAAGCGCTCAAGAGGGAACTAATGCTTTTATCTGTTGGCATTGGAACTGCATGCAGTGGGTATTGCCTGATAGTATTTTCGTTCCAGGCTGCCATTAGTTATGCAGTAGGAGTCCTTTCGAGCTGCTTATACCTCCAGCTATTATATCAGCACGCTGACAAACTATCCAAAGACATGATTCCTGATATTTTCACTCAGAAAAAGACAAAAAAGATTGGAATAAGAAGTGAAGATATCAAGAACGTGGTTGAGAAATTAGTGAAGGGAAGTGGCGTTGCCCTTTCATCTCCTAGGCTTATGATTCCTGCGGCAATATATGCATTATGGATTCTCTCCCATAAGTTTCTTGCCAACGACTTCTTCGACTTCCAGCTTACGCCAGCTATGCTTGGGATGTTTGTCTATAAAGCAGCTGCACTTGTTCAAGTTTATAGGGAGAATGAAAACTTGAGATTGGTCTTTCCAGAAAATGATGGAGATTCGACATGA METLSMVTCFTGKQITPPSRFLSRTFTSLPHFQKSKPIRAVSEIAEEDVLQAFFEERKLNSDFISKTSDMLWQRAVLKFEDVTDDRFMDTSQGLVDDNDDDGGFLKLSVTQKWISGGNSAPINKKAGNKILSDDRERKKKLNFLKYEALKRELMLLSVGIGTACSGYCLIVFSFQAAISYAVGVLSSCLYLQLLYQHADKLSKDMIPDIFTQKKTKKIGIRSEDIKNVVEKLVKGSGVALSSPRLMIPAAIYALWILSHKFLANDFFDFQLTPAMLGMFVYKAAALVQVYRENENLRLVFPENDGDST
BLAST of CsaV3_1G015030 vs. NCBI nr
Match: XP_004139496.1 (PREDICTED: uncharacterized protein LOC101208386 [Cucumis sativus] >KGN64952.1 hypothetical protein Csa_1G166810 [Cucumis sativus]) HSP 1 Score: 599.0 bits (1543), Expect = 9.3e-168 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
BLAST of CsaV3_1G015030 vs. NCBI nr
Match: XP_008463655.1 (PREDICTED: uncharacterized protein LOC103501748 isoform X2 [Cucumis melo]) HSP 1 Score: 568.2 bits (1463), Expect = 1.8e-158 Identity = 294/308 (95.45%), Postives = 301/308 (97.73%), Query Frame = 0
BLAST of CsaV3_1G015030 vs. NCBI nr
Match: XP_008463654.1 (PREDICTED: uncharacterized protein LOC103501748 isoform X1 [Cucumis melo]) HSP 1 Score: 561.6 bits (1446), Expect = 1.6e-156 Identity = 294/314 (93.63%), Postives = 301/314 (95.86%), Query Frame = 0
BLAST of CsaV3_1G015030 vs. NCBI nr
Match: XP_022973155.1 (uncharacterized protein LOC111471665 [Cucurbita maxima]) HSP 1 Score: 514.6 bits (1324), Expect = 2.3e-142 Identity = 268/316 (84.81%), Postives = 286/316 (90.51%), Query Frame = 0
BLAST of CsaV3_1G015030 vs. NCBI nr
Match: XP_022927620.1 (uncharacterized protein LOC111434387 [Cucurbita moschata]) HSP 1 Score: 507.3 bits (1305), Expect = 3.7e-140 Identity = 264/316 (83.54%), Postives = 285/316 (90.19%), Query Frame = 0
BLAST of CsaV3_1G015030 vs. TAIR10
Match: AT5G22340.2 (unknown protein) HSP 1 Score: 278.5 bits (711), Expect = 5.0e-75 Identity = 161/294 (54.76%), Postives = 201/294 (68.37%), Query Frame = 0
BLAST of CsaV3_1G015030 vs. TAIR10
Match: AT2G31040.1 (ATP synthase protein I -related) HSP 1 Score: 45.4 bits (106), Expect = 7.2e-05 Identity = 39/166 (23.49%), Postives = 71/166 (42.77%), Query Frame = 0
BLAST of CsaV3_1G015030 vs. TrEMBL
Match: tr|A0A0A0LVU8|A0A0A0LVU8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G166810 PE=4 SV=1) HSP 1 Score: 599.0 bits (1543), Expect = 6.2e-168 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
BLAST of CsaV3_1G015030 vs. TrEMBL
Match: tr|A0A1S3CLB9|A0A1S3CLB9_CUCME (uncharacterized protein LOC103501748 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501748 PE=4 SV=1) HSP 1 Score: 568.2 bits (1463), Expect = 1.2e-158 Identity = 294/308 (95.45%), Postives = 301/308 (97.73%), Query Frame = 0
BLAST of CsaV3_1G015030 vs. TrEMBL
Match: tr|A0A1S3CK87|A0A1S3CK87_CUCME (uncharacterized protein LOC103501748 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501748 PE=4 SV=1) HSP 1 Score: 561.6 bits (1446), Expect = 1.1e-156 Identity = 294/314 (93.63%), Postives = 301/314 (95.86%), Query Frame = 0
BLAST of CsaV3_1G015030 vs. TrEMBL
Match: tr|A0A061GU42|A0A061GU42_THECC (NF-kappa-B inhibitor-like protein 2 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_041354 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 3.8e-101 Identity = 204/318 (64.15%), Postives = 236/318 (74.21%), Query Frame = 0
BLAST of CsaV3_1G015030 vs. TrEMBL
Match: tr|A0A2P4N5N3|A0A2P4N5N3_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_75478 PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 7.2e-100 Identity = 203/319 (63.64%), Postives = 241/319 (75.55%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |