CsaV3_1G014240 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTAAACATCAAAAAGAAAATATATCAAAACCACCGAAAAGTGAAAAAGTGCTGAAAAGAAAAAAACAGATGAGGAGCAATGGTAAAGCAGGAGAACCACCACCACCACCATCATCATCATCATCAAAAGAAATGTCCTATGTAATAAAACATGGGACCGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTTGTGGCTATCGCAATGATTATATGTTGGCTTATTGTGTTTCCCAGAAACCCAGATATCATTGTGGAAACTGGCCAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCGACCATAGCTTTTACTGTTACAAGCTATAACCCTAACAAAAAAGCCTCCATTCGTATGGATTCCATGAGGATGATAGTTAGTGATATGGGGTTGTCGTTTTGGTCCGACATCCCCAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGACCTCCACCATCCAAGGCAACTTCATTTACCCATTTGGCCACATGAAAGAATTGATGAAGTTGGAGGGTATCAGTCCGGAGCTTCGCTTCTCGGCTAAAGTCAGGTAAAACCATTTGACTATATGTTTGTTTGTTTTTTTTTTTTTAATTCAAAATTTGTATTCTTTTTAGTTCTACAACTTAAAATCAAATTTTTAAAAATCTTAAATTTAGTATCTCAAACCTAATTTCTACCGAATTTGATTAAATACCAATAATAGTTTCCACTCATGAAAGTGTGAATTTGTACACTTTCAAAATTTATAATAAAAATGTTAATATATAACAAAAAGATAAAATTTAAATCAACAATAAACTAAGTGACACAAGAGAGTTCAAATGAACAACTTTACTTTCCCTCAAATTTGAAGTAATACCTTGTTTCTATTTTTAAGTACTAACAAGATGACCATTATTTTTTTGCTTTATTTTTAGATTTTGATAATTAAGCTTGTGTATATTACTTTTACAATATACATCAATTTTGTTATTTATAAATGTTTTCATATGCTATTTAAGTTATTTTTTAGTTTTTTAACATATAGTTTTGGTGTAAATTAAACATTTTTTTTGGTGTTCTTATCAGTTACATTATGGAGAGATGGACATCGAGAGATCGGTTGGTGGAGGTTTATTGTGATAGCCTTAGGCTTAAGTTCAATGATTCTACAGTTTTTGATAATAAAAAATGTAAAGTTGATCTATGAGATTTTCATCTTGTTGTGTTCTTCTTGCTCAATAATGATCCCAAAGATTTGTAACTCAAAGTTTTAATTGTGTTATTTTTATGAATAGAGAGAGTTGATCTTGTAATTATTTATTTTCAGTTTTTTGAATTTTCATGATTTGTGTTTGAATAATAATGTAGAAAAATGGTATAGAAGATTAAAAGATCAGGTTAAGGGAAGTAGAGTTTGGTTTTGGAAGAGTTGACTAAGATTATATAATTTAATTTGTTGATGTGTGTGAAGAAAAAGAAAAAAGTGTAATGGTGACCTAGAAAAAAGAAACATCTAAAACTTATTAATTACAGGA ATGAGGAGCAATGGTAAAGCAGGAGAACCACCACCACCACCATCATCATCATCATCAAAAGAAATGTCCTATGTAATAAAACATGGGACCGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTTGTGGCTATCGCAATGATTATATGTTGGCTTATTGTGTTTCCCAGAAACCCAGATATCATTGTGGAAACTGGCCAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCGACCATAGCTTTTACTGTTACAAGCTATAACCCTAACAAAAAAGCCTCCATTCGTATGGATTCCATGAGGATGATAGTTAGTGATATGGGGTTGTCGTTTTGGTCCGACATCCCCAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGACCTCCACCATCCAAGGCAACTTCATTTACCCATTTGGCCACATGAAAGAATTGATGAAGTTGGAGGGTATCAGTCCGGAGCTTCGCTTCTCGGCTAAAGTCAGTTACATTATGGAGAGATGGACATCGAGAGATCGGTTGGTGGAGGTTTATTGTGATAGCCTTAGGCTTAAGTTCAATGATTCTACAGTTTTTGATAATAAAAAATGTAAAGTTGATCTATGA ATGAGGAGCAATGGTAAAGCAGGAGAACCACCACCACCACCATCATCATCATCATCAAAAGAAATGTCCTATGTAATAAAACATGGGACCGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTTGTGGCTATCGCAATGATTATATGTTGGCTTATTGTGTTTCCCAGAAACCCAGATATCATTGTGGAAACTGGCCAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCGACCATAGCTTTTACTGTTACAAGCTATAACCCTAACAAAAAAGCCTCCATTCGTATGGATTCCATGAGGATGATAGTTAGTGATATGGGGTTGTCGTTTTGGTCCGACATCCCCAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGACCTCCACCATCCAAGGCAACTTCATTTACCCATTTGGCCACATGAAAGAATTGATGAAGTTGGAGGGTATCAGTCCGGAGCTTCGCTTCTCGGCTAAAGTCAGTTACATTATGGAGAGATGGACATCGAGAGATCGGTTGGTGGAGGTTTATTGTGATAGCCTTAGGCTTAAGTTCAATGATTCTACAGTTTTTGATAATAAAAAATGTAAAGTTGATCTATGA MRSNGKAGEPPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL
BLAST of CsaV3_1G014240 vs. NCBI nr
Match: XP_004139454.1 (PREDICTED: uncharacterized protein LOC101218532 [Cucumis sativus] >KGN64868.1 hypothetical protein Csa_1G134270 [Cucumis sativus]) HSP 1 Score: 396.0 bits (1016), Expect = 8.2e-107 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. NCBI nr
Match: XP_008462326.1 (PREDICTED: uncharacterized protein LOC103500702 [Cucumis melo]) HSP 1 Score: 364.4 bits (934), Expect = 2.7e-97 Identity = 180/191 (94.24%), Postives = 187/191 (97.91%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. NCBI nr
Match: XP_023520091.1 (uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 259.2 bits (661), Expect = 1.2e-65 Identity = 119/190 (62.63%), Postives = 155/190 (81.58%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. NCBI nr
Match: XP_022964992.1 (uncharacterized protein At1g08160-like [Cucurbita moschata]) HSP 1 Score: 258.8 bits (660), Expect = 1.6e-65 Identity = 119/190 (62.63%), Postives = 155/190 (81.58%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. NCBI nr
Match: XP_022970341.1 (uncharacterized protein At1g08160-like [Cucurbita maxima]) HSP 1 Score: 255.4 bits (651), Expect = 1.7e-64 Identity = 118/189 (62.43%), Postives = 153/189 (80.95%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. TAIR10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 61.2 bits (147), Expect = 8.7e-10 Identity = 48/176 (27.27%), Postives = 79/176 (44.89%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. TAIR10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 59.3 bits (142), Expect = 3.3e-09 Identity = 52/181 (28.73%), Postives = 84/181 (46.41%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. TAIR10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07 Identity = 47/166 (28.31%), Postives = 78/166 (46.99%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. TAIR10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 45.8 bits (107), Expect = 3.8e-05 Identity = 44/186 (23.66%), Postives = 76/186 (40.86%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. TAIR10
Match: AT4G09590.1 (NDR1/HIN1-like 22) HSP 1 Score: 43.5 bits (101), Expect = 1.9e-04 Identity = 27/105 (25.71%), Postives = 52/105 (49.52%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 6.0e-08 Identity = 52/181 (28.73%), Postives = 84/181 (46.41%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. Swiss-Prot
Match: sp|Q8VZ13|Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.9e-06 Identity = 47/166 (28.31%), Postives = 78/166 (46.99%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. TrEMBL
Match: tr|A0A0A0LSV0|A0A0A0LSV0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 5.5e-107 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. TrEMBL
Match: tr|A0A1S3CGQ5|A0A1S3CGQ5_CUCME (uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=4 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 1.8e-97 Identity = 180/191 (94.24%), Postives = 187/191 (97.91%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. TrEMBL
Match: tr|A0A1S3CGS4|A0A1S3CGS4_CUCME (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 8.0e-58 Identity = 115/185 (62.16%), Postives = 144/185 (77.84%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. TrEMBL
Match: tr|A0A0A0LY09|A0A0A0LY09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.3e-57 Identity = 113/184 (61.41%), Postives = 145/184 (78.80%), Query Frame = 0
BLAST of CsaV3_1G014240 vs. TrEMBL
Match: tr|A0A0A0LVK9|A0A0A0LVK9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.7e-52 Identity = 103/183 (56.28%), Postives = 137/183 (74.86%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |