CsaV3_1G014220 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G014220
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionLate embryogenesis abundant protein
Locationchr1 : 9656026 .. 9657360 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCATATATTCCTGTTCCTCTTCATTAAGCAAACCAAAAGCACACACCCACACACACTTCTTATATTTCCCATCGACATCTCCCTTCACTTATAGCATGAGGGAGAAAAAGAAATATCAAAATCACCCAGAAAAAGGTAAGAATTTTGTGAAGAACAACAATGAGGAGCAGTACTACAGCAAAGGGAGAAGCATCATCGTCAAAAAAAAGCTCCAAAGGGCAAAATGAGACAACAAAAAAGACGAGAATTATAAGAATCATAGGAAGAAGTTTGTTGAGTGTAATATTTCTTGTTGGTCTTGCAATGGTCATATGTTGGCTTGTTGTGTTCCCCAAAAATCCTCGTATCTTTGTGGAAACTGGCAGAGTCATAGCCCACAATTCAACTCATAATATGCTCAATGCCACCATAGTTTTCACCGTTAAATGCTACAACCCCAACAAAAGAGCCTCGGTTCATTTGCACTCTATGAGGATGATAGTTACTAGCATGGGCCAAGCATTTTCGTCCGTTATCCCGACATTCATGCAGACTCCTGGAAACCAAACCGTCTTGTCGCCTGCTGTTGAGGTCAACTTCGACTATCCATTCGGGCACCAAGAAGAGATAAATCCAGAGCTTCACTTCTCTGCTGAAATCAGGTATACATATCTTAGGTGCATCTTAATATACACCTATCTTTGTGCATTCCAATCACATCACAAACTTCATAATAATATAATAAAATATTTAATACGGAAAGGATAATTTGACGCATAAAAAATTAATAGTATATAGAAATATAGGTGCGAATAGATGTGTGATAATTATTATATATATATATATATATATATAGGTTTTATTGAGGTCAATTTTTTTTTTATATATTTAAAATTAAATGTTTGTGGCGTGTGGGTACTTCATGGAATAAAATCATTACTTTACCTCCTTTTTCACCTAAATCACTAGTGATAACTAGTTCTTGTGGTTAGATTTTGAAAAGTAACTAGGCTTACTTCTACAAATAAATATTTTTCTTTTGTCATCAACCTTTGTTTCTACTTTTAAAATGTAATTTTGTTTCGATCTAATTTGTACTTTCGACTCTGTTGTTATCAGCTATAGTGTCGAGCACTGGACATCGAGACCTCGGTTGCTCCTAATCTATTGTAATAATCTCCTGCTAAGAATCAATGATACTAGAACTTTTGAGAATACCAAATGCAATGTGGATCTTTGAGATCTGATATATATTTGTCGTTTATGATATTCTTGCTGAATAATCTAAAAAATTTGCAACTTAAAGTTCCTTTTTCTTTTTGGTTTGATTTTGCTTTATTTTTTTAATAATCAAG

mRNA sequence

ATGAGGAGCAGTACTACAGCAAAGGGAGAAGCATCATCGTCAAAAAAAAGCTCCAAAGGGCAAAATGAGACAACAAAAAAGACGAGAATTATAAGAATCATAGGAAGAAGTTTGTTGAGTGTAATATTTCTTGTTGGTCTTGCAATGGTCATATGTTGGCTTGTTGTGTTCCCCAAAAATCCTCGTATCTTTGTGGAAACTGGCAGAGTCATAGCCCACAATTCAACTCATAATATGCTCAATGCCACCATAGTTTTCACCGTTAAATGCTACAACCCCAACAAAAGAGCCTCGGTTCATTTGCACTCTATGAGGATGATAGTTACTAGCATGGGCCAAGCATTTTCGTCCGTTATCCCGACATTCATGCAGACTCCTGGAAACCAAACCGTCTTGTCGCCTGCTGTTGAGGTCAACTTCGACTATCCATTCGGGCACCAAGAAGAGATAAATCCAGAGCTTCACTTCTCTGCTGAAATCAGCTATAGTGTCGAGCACTGGACATCGAGACCTCGGTTGCTCCTAATCTATTGTAATAATCTCCTGCTAAGAATCAATGATACTAGAACTTTTGAGAATACCAAATGCAATGTGGATCTTTGA

Coding sequence (CDS)

ATGAGGAGCAGTACTACAGCAAAGGGAGAAGCATCATCGTCAAAAAAAAGCTCCAAAGGGCAAAATGAGACAACAAAAAAGACGAGAATTATAAGAATCATAGGAAGAAGTTTGTTGAGTGTAATATTTCTTGTTGGTCTTGCAATGGTCATATGTTGGCTTGTTGTGTTCCCCAAAAATCCTCGTATCTTTGTGGAAACTGGCAGAGTCATAGCCCACAATTCAACTCATAATATGCTCAATGCCACCATAGTTTTCACCGTTAAATGCTACAACCCCAACAAAAGAGCCTCGGTTCATTTGCACTCTATGAGGATGATAGTTACTAGCATGGGCCAAGCATTTTCGTCCGTTATCCCGACATTCATGCAGACTCCTGGAAACCAAACCGTCTTGTCGCCTGCTGTTGAGGTCAACTTCGACTATCCATTCGGGCACCAAGAAGAGATAAATCCAGAGCTTCACTTCTCTGCTGAAATCAGCTATAGTGTCGAGCACTGGACATCGAGACCTCGGTTGCTCCTAATCTATTGTAATAATCTCCTGCTAAGAATCAATGATACTAGAACTTTTGAGAATACCAAATGCAATGTGGATCTTTGA

Protein sequence

MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRTFENTKCNVDL
Homology
[Close]
BLAST of CsaV3_1G014220 vs. NCBI nr
Match: XP_011648454.1 (PREDICTED: uncharacterized protein LOC105434469 [Cucumis sativus] >KGN64867.1 hypothetical protein Csa_1G132770 [Cucumis sativus])

HSP 1 Score: 391.3 bits (1004), Expect = 1.9e-105
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120
           PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP
Sbjct: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120

Query: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180
           TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN
Sbjct: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 201
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

[Close]
BLAST of CsaV3_1G014220 vs. NCBI nr
Match: XP_008462337.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo])

HSP 1 Score: 364.0 bits (933), Expect = 3.3e-97
Identity = 183/200 (91.50%), Postives = 190/200 (95.00%), Query Frame = 0 

Query: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRS TT KGEASSS+KSSKGQNETTKKTRIIRIIGR LLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120
           PR  VETG+VIAHNSTHNMLNATI FTVKCYNPNKRAS+HLHSMRMI+TSMGQAFSS +P
Sbjct: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120

Query: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180
            FMQTPGNQTVLSPAV+VNFDYPFGH+EEINPELHFSAEISYSV HWTSRPRLL IYCNN
Sbjct: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 201
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

[Close]
BLAST of CsaV3_1G014220 vs. NCBI nr
Match: XP_008462348.1 (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 258.1 bits (658), Expect = 2.5e-65
Identity = 125/176 (71.02%), Postives = 148/176 (84.09%), Query Frame = 0 

Query: 25  TKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNATI 84
           TK+TR+IR++GRSLL VIFLV L M+ICWLVV PK PR+ VETG+V+ H+ST +MLNATI
Sbjct: 13  TKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLNATI 72

Query: 85  VFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVEVNFDYPF 144
            FTVK YNPNKRAS+H+  MRMIV +MG  FSS IP+F  TP NQTVL  AV+VNF+YPF
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLWSAVQVNFEYPF 132

Query: 145 GHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRTFENTKCNVDL 201
           G+ EEINPEL FSAE+SYSVE W S+PRLL IYCN+LLL+IND+ TF+NTKC VDL
Sbjct: 133 GYTEEINPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL 188

[Close]
BLAST of CsaV3_1G014220 vs. NCBI nr
Match: XP_011654134.1 (PREDICTED: protein YLS9-like isoform X2 [Cucumis sativus] >KGN64866.1 hypothetical protein Csa_1G132760 [Cucumis sativus])

HSP 1 Score: 256.9 bits (655), Expect = 5.6e-65
Identity = 123/175 (70.29%), Postives = 149/175 (85.14%), Query Frame = 0 

Query: 25  TKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNATI 84
           TK+TR+IR++GRSLL VIFLV L M+ICWLVV PK+PR+ VETG+VIAH+ST +MLNATI
Sbjct: 13  TKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLNATI 72

Query: 85  VFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVEVNFDYPF 144
            FTVK YNPNKRAS+H+  MRMIV +MG  FSS IP+F  TP NQTVLS AV+VNF+YPF
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLSSAVQVNFEYPF 132

Query: 145 GHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRTFENTKCNVD 200
           G+ EEINPEL FSAE+SYS++ W S+PRLL IYCN++LL+IND+  F+NTKC VD
Sbjct: 133 GYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHILLKINDSTAFDNTKCKVD 187

[Close]
BLAST of CsaV3_1G014220 vs. NCBI nr
Match: XP_023520091.1 (uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55
Identity = 123/215 (57.21%), Postives = 155/215 (72.09%), Query Frame = 0 

Query: 1   MRSSTTAKGEASSS--------KKSSKG-QNETTKKTRIIRIIGRSLLSVIFLVGLAMVI 60
           MRS+T  +GEASSS        K SS G Q+ T K+T+++RIIGRSLL+V+FLVGLA+VI
Sbjct: 1   MRSNT--QGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVI 60

Query: 61  CWLVVFPKNPRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSM 120
           CWLVVFPK P + +E G V  H+ T   LNA+I FT+K YNPNKRAS+H+ SM+M +  M
Sbjct: 61  CWLVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDM 120

Query: 121 GQAFSSVIPTFMQTPGNQTVLSPAVEVNFDYPFGHQEE------INPELHFSAEISYSVE 180
           GQ F++ IPTF Q PGNQT L+P VEVNF YPFG  ++      +NPELHFSA +SY VE
Sbjct: 121 GQTFTTTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVE 180

Query: 181 HWTSRPRLLLIYCNNLLLRINDTRTFENTKCNVDL 201
            W S+ R L IYC+ + L+IN +  F+NTKC VDL
Sbjct: 181 KWASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]
BLAST of CsaV3_1G014220 vs. TAIR10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 61.6 bits (148), Expect = 6.3e-10
Identity = 52/188 (27.66%), Postives = 91/188 (48.40%), Query Frame = 0 

Query: 26  KKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTH-NMLNATI 85
           ++  +I  I   +L++IF+  +  +I WL   PK  R  VE   V   N T+ N ++AT 
Sbjct: 21  RRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATF 80

Query: 86  VFTVKCYNPNKRASVHLHSMRMIVTSMGQ--AFSSVIPTFMQTPGN-----QTVLSPAVE 145
            FT++ +NPN R SV+  S+ + V    Q  AF +V P F Q   N     +T+++  V 
Sbjct: 81  QFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEP-FHQPRMNVKQIDETLIAENVA 140

Query: 146 VNFDYPFGHQEE-----INPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRTFE 201
           V+       + +     I  E+   A + + V  W S  R   I C+++ + ++     +
Sbjct: 141 VSKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQ 200

[Close]
BLAST of CsaV3_1G014220 vs. TAIR10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 48.5 bits (114), Expect = 5.5e-06
Identity = 47/168 (27.98%), Postives = 75/168 (44.64%), Query Frame = 0 

Query: 50  VICWLVVFPKNPRIFVETGRV----IAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMR 109
           +I +L + PK     VE   V    I +N  H  +NA   + +K YNP K  SV  HSMR
Sbjct: 56  LITYLTLRPKRLIYTVEAASVQEFAIGNNDDH--INAKFSYVIKSYNPEKHVSVRYHSMR 115

Query: 110 MIVTSMGQAFS-SVIPTFMQTPGNQT-----VLSPAVEVN-FDYPFGHQEE----INPEL 169
           +      Q+ +   I  F Q P N+T     ++S  V ++ F+      E+    I  E+
Sbjct: 116 ISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEV 175

Query: 170 HFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRT--FENTKCNVDL 201
           + +A +SY    + SR R L   C  +++ +  +    F+   C   L
Sbjct: 176 YITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]
BLAST of CsaV3_1G014220 vs. TAIR10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 48.5 bits (114), Expect = 5.5e-06
Identity = 32/111 (28.83%), Postives = 57/111 (51.35%), Query Frame = 0 

Query: 30  IIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRV--IAHNSTHNMLNATIVFT 89
           ++ +  + ++S+I ++G+A +I WL+V P+  +  V    +    H S  N+L   +  T
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 90  VKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPT-FMQTPGNQTVLSPAVE 138
           V   NPNKR  ++   +       G+ FS++  T F Q   N TVL+P  +
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQ 147

[Close]
BLAST of CsaV3_1G014220 vs. TAIR10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 45.8 bits (107), Expect = 3.6e-05
Identity = 24/85 (28.24%), Postives = 46/85 (54.12%), Query Frame = 0 

Query: 37  SLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNST-HNMLNATIVFTVKCYNPNK 96
           ++ +++ ++G+  +I WLV  P  PR+ V    +   N T   +++ ++ F+V   NPN+
Sbjct: 47  AIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLARNPNR 106

Query: 97  RASVHLHSMRMIVTSMGQAFSSVIP 121
           R S+H   + M VT   Q  +  +P
Sbjct: 107 RVSIHYDKLSMYVTYKDQIITPPLP 131

[Close]
BLAST of CsaV3_1G014220 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.0e-04
Identity = 32/111 (28.83%), Postives = 57/111 (51.35%), Query Frame = 0 

Query: 30  IIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRV--IAHNSTHNMLNATIVFT 89
           ++ +  + ++S+I ++G+A +I WL+V P+  +  V    +    H S  N+L   +  T
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 90  VKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPT-FMQTPGNQTVLSPAVE 138
           V   NPNKR  ++   +       G+ FS++  T F Q   N TVL+P  +
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQ 147

[Close]
BLAST of CsaV3_1G014220 vs. Swiss-Prot
Match: sp|Q8VZ13|Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.0e-04
Identity = 47/168 (27.98%), Postives = 75/168 (44.64%), Query Frame = 0 

Query: 50  VICWLVVFPKNPRIFVETGRV----IAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMR 109
           +I +L + PK     VE   V    I +N  H  +NA   + +K YNP K  SV  HSMR
Sbjct: 56  LITYLTLRPKRLIYTVEAASVQEFAIGNNDDH--INAKFSYVIKSYNPEKHVSVRYHSMR 115

Query: 110 MIVTSMGQAFS-SVIPTFMQTPGNQT-----VLSPAVEVN-FDYPFGHQEE----INPEL 169
           +      Q+ +   I  F Q P N+T     ++S  V ++ F+      E+    I  E+
Sbjct: 116 ISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEV 175

Query: 170 HFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRT--FENTKCNVDL 201
           + +A +SY    + SR R L   C  +++ +  +    F+   C   L
Sbjct: 176 YITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]
BLAST of CsaV3_1G014220 vs. TrEMBL
Match: tr|A0A0A0LVK9|A0A0A0LVK9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.3e-105
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120
           PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP
Sbjct: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120

Query: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180
           TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN
Sbjct: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 201
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

[Close]
BLAST of CsaV3_1G014220 vs. TrEMBL
Match: tr|A0A1S3CGR5|A0A1S3CGR5_CUCME (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500709 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 2.2e-97
Identity = 183/200 (91.50%), Postives = 190/200 (95.00%), Query Frame = 0 

Query: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRS TT KGEASSS+KSSKGQNETTKKTRIIRIIGR LLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120
           PR  VETG+VIAHNSTHNMLNATI FTVKCYNPNKRAS+HLHSMRMI+TSMGQAFSS +P
Sbjct: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120

Query: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180
            FMQTPGNQTVLSPAV+VNFDYPFGH+EEINPELHFSAEISYSV HWTSRPRLL IYCNN
Sbjct: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 201
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

[Close]
BLAST of CsaV3_1G014220 vs. TrEMBL
Match: tr|A0A1S3CGS4|A0A1S3CGS4_CUCME (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.7e-65
Identity = 125/176 (71.02%), Postives = 148/176 (84.09%), Query Frame = 0 

Query: 25  TKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNATI 84
           TK+TR+IR++GRSLL VIFLV L M+ICWLVV PK PR+ VETG+V+ H+ST +MLNATI
Sbjct: 13  TKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLNATI 72

Query: 85  VFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVEVNFDYPF 144
            FTVK YNPNKRAS+H+  MRMIV +MG  FSS IP+F  TP NQTVL  AV+VNF+YPF
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLWSAVQVNFEYPF 132

Query: 145 GHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRTFENTKCNVDL 201
           G+ EEINPEL FSAE+SYSVE W S+PRLL IYCN+LLL+IND+ TF+NTKC VDL
Sbjct: 133 GYTEEINPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL 188

[Close]
BLAST of CsaV3_1G014220 vs. TrEMBL
Match: tr|A0A0A0LY09|A0A0A0LY09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.7e-65
Identity = 123/175 (70.29%), Postives = 149/175 (85.14%), Query Frame = 0 

Query: 25  TKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNATI 84
           TK+TR+IR++GRSLL VIFLV L M+ICWLVV PK+PR+ VETG+VIAH+ST +MLNATI
Sbjct: 13  TKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLNATI 72

Query: 85  VFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVEVNFDYPF 144
            FTVK YNPNKRAS+H+  MRMIV +MG  FSS IP+F  TP NQTVLS AV+VNF+YPF
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLSSAVQVNFEYPF 132

Query: 145 GHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRTFENTKCNVD 200
           G+ EEINPEL FSAE+SYS++ W S+PRLL IYCN++LL+IND+  F+NTKC VD
Sbjct: 133 GYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHILLKINDSTAFDNTKCKVD 187

[Close]
BLAST of CsaV3_1G014220 vs. TrEMBL
Match: tr|A0A0A0LSV0|A0A0A0LSV0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51
Identity = 103/183 (56.28%), Postives = 137/183 (74.86%), Query Frame = 0 

Query: 24  TTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNAT 83
           T K+TR++RI GR+LL ++ LV +AM+ICWL+VFP+NP I VETG+VI H+ T   LNAT
Sbjct: 30  TAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTDRKLNAT 89

Query: 84  IVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVEVNFDYP 143
           I FTV  YNPNK+AS+ + SMRMIV+ MG +F S IP+F Q P N+TVL+  ++ NF YP
Sbjct: 90  IAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTIQGNFIYP 149

Query: 144 FGHQEE------INPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRTFENTKCN 201
           FGH +E      I+PEL FSA++SY +E WTSR RL+ +YC++L L+ ND+  F+N KC 
Sbjct: 150 FGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTVFDNKKCK 209

The following BLAST results are available for this feature:
BLAST of CsaV3_1G014220 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011648454.11.9e-105100.00PREDICTED: uncharacterized protein LOC105434469 [Cucumis sativus] >KGN64867.1 hy... [more]
XP_008462337.13.3e-9791.50PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo][more]
XP_008462348.12.5e-6571.02PREDICTED: protein YLS9-like [Cucumis melo][more]
XP_011654134.15.6e-6570.29PREDICTED: protein YLS9-like isoform X2 [Cucumis sativus] >KGN64866.1 hypothetic... [more]
XP_023520091.11.1e-5557.21uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_1G014220 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G22870.16.3e-1027.66Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT1G08160.15.5e-0627.98Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT2G35980.15.5e-0628.83Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT4G01410.13.6e-0528.24Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
BLAST of CsaV3_1G014220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SJ52|NHL10_ARATH1.0e-0428.83NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1[more]
sp|Q8VZ13|Y1816_ARATH1.0e-0427.98Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P... [more]
BLAST of CsaV3_1G014220 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LVK9|A0A0A0LVK9_CUCSA1.3e-105100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 SV=1[more]
tr|A0A1S3CGR5|A0A1S3CGR5_CUCME2.2e-9791.50NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500709 PE=4 SV=1[more]
tr|A0A1S3CGS4|A0A1S3CGS4_CUCME1.7e-6571.02protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1[more]
tr|A0A0A0LY09|A0A0A0LY09_CUCSA3.7e-6570.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1[more]
tr|A0A0A0LSV0|A0A0A0LSV0_CUCSA1.4e-5156.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G014220.1CsaV3_1G014220.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 87..142
e-value: 1.4E-5
score: 25.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availablePANTHERPTHR31852:SF5GB|AAF18257.1coord: 21..200
NoneNo IPR availablePANTHERPTHR31852FAMILY NOT NAMEDcoord: 21..200

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G014220Cucumber (Gy14) v2cgybcucB002
CsaV3_1G014220Cucumber (Gy14) v1cgycucB322
CsaV3_1G014220Cucurbita maxima (Rimu)cmacucB0188
CsaV3_1G014220Cucurbita maxima (Rimu)cmacucB0234
CsaV3_1G014220Cucurbita maxima (Rimu)cmacucB0694
CsaV3_1G014220Cucurbita moschata (Rifu)cmocucB0172
CsaV3_1G014220Cucurbita moschata (Rifu)cmocucB0221
CsaV3_1G014220Cucurbita pepo (Zucchini)cpecucB0635
CsaV3_1G014220Cucurbita pepo (Zucchini)cpecucB0996
CsaV3_1G014220Wild cucumber (PI 183967)cpicucB001
CsaV3_1G014220Bottle gourd (USVL1VR-Ls)cuclsiB048
CsaV3_1G014220Melon (DHL92) v3.5.1cucmeB010
CsaV3_1G014220Melon (DHL92) v3.6.1cucmedB009
CsaV3_1G014220Watermelon (Charleston Gray)cucwcgB016
CsaV3_1G014220Watermelon (Charleston Gray)cucwcgB030
CsaV3_1G014220Watermelon (97103) v1cucwmB054
CsaV3_1G014220Watermelon (97103) v1cucwmB060
CsaV3_1G014220Watermelon (97103) v1cucwmB074
CsaV3_1G014220Watermelon (97103) v2cucwmbB002
CsaV3_1G014220Watermelon (97103) v2cucwmbB025
CsaV3_1G014220Wax gourdcucwgoB051
CsaV3_1G014220Silver-seed gourdcarcucB0192