CsaV3_1G013830 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G013830
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 9132524 .. 9132807 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCAAGTTGTGTCAATCGAGGCAAGCTGGTGATCAAAAAAAGATTATTAGTGGAAAGGCCTCAAACTTCGTCTGCGCGTCTACGTCCTTCAATGTCGCAACTTTGCCCCGAACGCCTCAGACTACGACTTAGTTATAGAAGTATATTTTTATTGTCAGTTTAGACCTAGGCCTGATTGTAGCCATTTCTCTTCAGTTTCCTCTCCGTTATCTGATTGCTTTTTGTTGGTTTATGTTTTTGAACAATTCCTCATCATCCAACACGTGGATGAAAGGCTAA

mRNA sequence

ATGGAGTCAAGTTGTGTCAATCGAGGCAAGCTGGTGATCAAAAAAAGATTATTAGTGGAAAGGCCTCAAACTTCGTCTGCGCGTCTACGTCCTTCAATGTCGCAACTTTGCCCCGAACGCCTCAGACTACGACTTAGTTATAGAAACCTAGGCCTGATTGTAGCCATTTCTCTTCAGTTTCCTCTCCGTTATCTGATTGCTTTTTGTTGGTTTATGTTTTTGAACAATTCCTCATCATCCAACACGTGGATGAAAGGCTAA

Coding sequence (CDS)

ATGGAGTCAAGTTGTGTCAATCGAGGCAAGCTGGTGATCAAAAAAAGATTATTAGTGGAAAGGCCTCAAACTTCGTCTGCGCGTCTACGTCCTTCAATGTCGCAACTTTGCCCCGAACGCCTCAGACTACGACTTAGTTATAGAAACCTAGGCCTGATTGTAGCCATTTCTCTTCAGTTTCCTCTCCGTTATCTGATTGCTTTTTGTTGGTTTATGTTTTTGAACAATTCCTCATCATCCAACACGTGGATGAAAGGCTAA

Protein sequence

MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQFPLRYLIAFCWFMFLNNSSSSNTWMKG
BLAST of CsaV3_1G013830 vs. NCBI nr
Match: KGN64823.1 (hypothetical protein Csa_1G119900 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 1.8e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query: 1  MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF 60
          MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF
Sbjct: 1  MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF 60

Query: 61 PLRYLIAFCWFMFLNNSSSSNTWMKG 87
          PLRYLIAFCWFMFLNNSSSSNTWMKG
Sbjct: 61 PLRYLIAFCWFMFLNNSSSSNTWMKG 86

BLAST of CsaV3_1G013830 vs. TrEMBL
Match: tr|A0A0A0LSP9|A0A0A0LSP9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G119900 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query: 1  MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF 60
          MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF
Sbjct: 1  MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF 60

Query: 61 PLRYLIAFCWFMFLNNSSSSNTWMKG 87
          PLRYLIAFCWFMFLNNSSSSNTWMKG
Sbjct: 61 PLRYLIAFCWFMFLNNSSSSNTWMKG 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN64823.11.8e-39100.00hypothetical protein Csa_1G119900 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LSP9|A0A0A0LSP9_CUCSA1.2e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G119900 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G013830.1CsaV3_1G013830.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None