CsaV3_1G013210 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G013210
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 8531295 .. 8531486 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACGATTGGGACGGGGCTACCGGTGAGAACCCGGCGTTGCAGATCTGGACAACGGCGCGGTGAGACGGTTGTGTCTGGCTGGGTTTGGACGGAACAGAGAGGAGAAAAGAGGGAGACAGCCGGCGATGCAGATCTGGACGACGGTTGTGAGCGGAGGGCGTGGCGGTTTTGGCTTCGACGGAGATAG

mRNA sequence

ATGGAGACGATTGGGACGGGGCTACCGGTGAGAACCCGGCGTTGCAGATCTGGACAACGGCGCGGTGAGACGGTTGTGTCTGGCTGGGTTTGGACGGAACAGAGAGGAGAAAAGAGGGAGACAGCCGGCGATGCAGATCTGGACGACGGTTGTGAGCGGAGGGCGTGGCGGTTTTGGCTTCGACGGAGATAG

Coding sequence (CDS)

ATGGAGACGATTGGGACGGGGCTACCGGTGAGAACCCGGCGTTGCAGATCTGGACAACGGCGCGGTGAGACGGTTGTGTCTGGCTGGGTTTGGACGGAACAGAGAGGAGAAAAGAGGGAGACAGCCGGCGATGCAGATCTGGACGACGGTTGTGAGCGGAGGGCGTGGCGGTTTTGGCTTCGACGGAGATAG

Protein sequence

METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWLRRR
BLAST of CsaV3_1G013210 vs. NCBI nr
Match: KGN64773.1 (hypothetical protein Csa_1G096080 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 9.3e-30
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0

Query: 1  METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWL 60
          METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWL
Sbjct: 1  METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWL 60

Query: 61 RRR 64
          RRR
Sbjct: 61 RRR 63

BLAST of CsaV3_1G013210 vs. TrEMBL
Match: tr|A0A0A0LSK8|A0A0A0LSK8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096080 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.2e-30
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0

Query: 1  METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWL 60
          METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWL
Sbjct: 1  METIGTGLPVRTRRCRSGQRRGETVVSGWVWTEQRGEKRETAGDADLDDGCERRAWRFWL 60

Query: 61 RRR 64
          RRR
Sbjct: 61 RRR 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN64773.19.3e-30100.00hypothetical protein Csa_1G096080 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LSK8|A0A0A0LSK8_CUCSA6.2e-30100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096080 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G013210.1CsaV3_1G013210.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None