CsaV3_1G013060 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G013060
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRBR-type E3 ubiquitin transferase
Locationchr1 : 8402134 .. 8406277 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTGCCTCATTCTCACGTCAAATAATAATTATTTGAGGAAAAAGAAAAAGAGTTTAGTTTGTATTTTCAATCGCAAAGGTTGCGCGTACTCGGTTAAGAAAAGGTACGATTCAGCGGAATGTGGAAGATCATTTCTCCGTCTTTCCATCTTCCTTCTACAATCATTTTCAACAAATTCTCCAAATTCCAAAACCCCTTTTGATTCTTCTATACTCCTTCAGTTTCCCTATCTTCTTCACTCCCCATTACTCCACTCTTCTTCTCTCCCAACCTCACACAACCAACAATCAACTGCAATGGCGGACACCATGAACGACGACGACTGCGTTCAGGATTTGATCACCCAACAGCGTTCCGAAATCCTTTCCGCCAAAACCCTTTTCTCTGATCTCGATTTCGCCTTCCAACTTCAACTCCAGGAGGCAATGGATGCCTCTCTTGCTTCTAAACCCTCCACCGACTCATCTTCCTCACTTAACACCCCCGACCCTGTCTTGGATTCTGAAGACACTAGCGGTTTAGACTTGGCTACCACTCTTATGCTCGAAGACATTGCGAGGTTTGCTATGGAGTTCAAGGACCGGGAGCAATGTCAGACTGAAATGAGGAAAATGAAGGAGGAGCTTGATCGTCGGATTCATGATCAGAAGTTTGCGGAATTTATTCGGAGTGTTCCTGAGAATGAGTGGAGGGAGTATGGGGATAATTATGAGAAGCCGTATGGTGAAAGTTCATCGTCTTCTTCTTCTTCTTCTTCTTCTTCCTGGAGTGTGGACTCTGAATGTTGTAGGGTGTATTCGAAGGGGTTGATTAGTGAAGAGAGGATTAGAGATATGGTGGTTAGGGTTGCTGGAATTGGGGTTGCGGTTTGTGATCCTAAGGATAATCTGTTGTTTGAGAAGATGAGTCCTATAGAATCTATGGTGGAAGGTAAAGAAACCAGCAGCGAATGCGCTGAGCTTGAAGCGCTGGTTGAAGGTCTCAATGTTGCTCTTATTTTAGGCTTGAAAACTGTCACATTTTTCTGTGCTGATTACATGCTCTACCAGTATGTAAGTTGCTTCAACTGTTCATTCATCCCTCCTTTTAATGTCGATATATTATTCCATGGTTAGAGTCTAAGAAGCACGGATATATACATTTTTAAAAGAAGAAAATTCAAAGTAAATGCACTGATCTATTTATATGCTTCAAAAATTAGTTTGAGGTATTTCACAATCAAAATTGTTATTATTGTCATATATGCGACTTTTTTGTCTGCCAACAAATGTTCTATTCACATCTTCCACATTTGTTGTGCATTAGGCGTGTGATGTTAATAAGTGTTGGAGTGTCGGACACGGCTAGGACATAGATATGCAAGCCAAATTAAAGCGTTCGTGCTTCTTATGTTAGAGTTGTGTTGATTATTGTTCTTTGAATATGGTTCTCTGTCGGAAATCATTTAAGAGTGTTTGGGTATGAGAGTTTATTTGATTTACAATTCTCTGAGGAGATGCTTTTTTTGTGAACAGGAATGGTCTTTGAGAACATTAAGCAAATATTACTGTGAATGCTGAAAATACACCCAATTGAAGAGCCTTTGGAGCATAAAAATATGGCTAGTGAAAGTTATTGTCCTATCTTAAGCCATTGTCGCCACCTACTTAGATTTGATATAATCCTTCAAGTTAACTTGACAACCAATAGTAGGTGGAGTGTGCGAAGAGGATACTCTCGGATATAAAAAATTTAAAAAACAAACTCAGGGGTACTTAGATTAGTGCTTAAATAAAGAGCTCTGTTTAGAAGCCATAATAAACGTACAATCTGCAAGTTCCAAATGTGCCTAATAAACTAATAAGGTGGGTGGTATTGGTTTCTTACCAAAGAAAAATATTAATGAACATATAATAATATTAACAAGGCTGGTATGAACTTTTTATCTGCTGCATCATGATCTCCACTGTCCTTAGCAGTTGGCTGAATATATGAACGAGACTAGTAGTTTGAAGTCTTATGTTAGATTAATGTTTATACCCCATTTATTAATATATGAATTGCCAGCTTTTTCAATAAATCCTTGTGGACAAAAAAATATAAATAAATAAACATCTTTTGGTTTTCCTTCGAGTGATTTATCTTTGTTGACATCAAATGATCGTATTATCATTTTAATTTAATTGGATTGAGTGCATTGCAAACTCTAGCACCCAGTAATATTTGTCTCTTTTCTGACTTTTCATATCCGATATGAGAAAGGGATATAATAAAAAGTTATAATTTGATATCCTAATCCATGCTCTGTGGTTACAGCTTACAGGTAGGGTGCCTCCAGCAACAAGCTCCACGGAAAAATTGGTTAATGAGGTGGTTGTTCTTCAGGGAAAATTTACATACTGTAACCCATCTCTCGTGACACGTAATGATATCAAGTTTGCTTTCAAACTTGCAAGAGAGGCTATAGTTTCTCAAATCACCTGGCCTGCACAAGCTGAAAATGGAAAGTGCTTGAAGGAAGAAACTTGCACAATTTGCTTTGAAGATGTTAGTGTGGATCAGATGTTCTCAGTTGATGGTTGTTTGCACAGATACTGCTTTTCTTGTATGAAACAGCATGTAGAAGTAAGGTTGCTGAACGGGAATGGGATGCAGGCAAACTGTCCACATCAGGGTTGTACGTCTGAGCTTAATATTGAAAGCTGCGGAAAGTTCTTGGAACCTAAGGTGTTTGAGATTATGAGCCAAAGAATTAAGGAAGCTTCTGTGCCTGTTCAGGAGAAAGTTTATTGCCCCTATTCCAGGTGCTCAGCATTAATGTCCAAAACAGATCTGTTAAGATACACCGAGGCTTTTTATATTGATGCGGAACGAACTGGGGCAAGGAAGTGCATGAAATGTAATCAGTTTTTCTGTATAAATTGCAAGGTCGCTTGGCATTATAACCTGACTTGCTACGACCACAGAAAGTTGAATCCCAATCTCCATCCAGATGAGAAAATGCTGAAGTCTCTTGCAACAAGGAAACTTTGGCGCCAATGCATTGTGTGTAACAATATGGTTGAATTGGCGGAAGGCTGCTATCACATCACCTGCAGGTGCACTATTTAGCTTTATCTATCTCACTTGCTCCATTTTTTCCTGGATGAACTGCAAATTGAGCAAAAAAATTACAACAGTTAACTGCAATATTTCTACAGCACCCAATAAACATTAATGCAATTCACAAACTTCTACATTCTTGGAGGTTGAGTTAGGGAACAGTATCTGAAATAAAAGAGTGCTAAGATTAATAATGAAATGGATACTGAAAAACACCCGTCAAAGTTGGTTAGCTGCACTCTCAATTTGCTGGATATGGATTTGTCTTGTCAAATAAAACAATAATAATTGACATTTGATTTGTTGAGGTTAGGACAGTTTTTTATCTTGCGCTTTTATATTGCTGCAAGTTTCTTTTGTTCATTGGAGTTTTCTCTCTCCTTTTTTAAATGTTAATGGTTTCTGTTCGCAGATGTGGATATGAGTTTTGCTATACATGTGGAGCCCCCTGGAAAAATAAGAAACCTACATGTAAGTGTCCGATATGGGACGAGCGGAACATCATACATCGAAGATGAGCTTTAGCTTTTTAGGTGACAATCTGGGGGATACTTGCGCCCTTTCTTCTCCCCTTCTGTTTCTTTGCAAACTTTTGTAAGGTAGCCGAAGATAGTAGGGTATTTTGTGCAGTTGTCTAGTTGGTGACATACTGAAGTTAAATCACAGCTTTGTCGACTTTAAATGTCTCATTTTCTATCTTGCAAGACAACCTCAGTCAGGTTGGAACTGATGGAAGAATACAAGTATAGATAGTAAGTTTCTTTTTCATCACTTTTAGGTTTGACATGAAGAGTTACTCATGTACAGTTTTTTTGGTCCACAAATTTCTTGTGGTCAGGAAAATAGGTTTTTAATGACTTAGAACTTTGGAACTTTCGTGTTGTTTAATGCATTAGAACAGAACAACGATGCTCTTGTTATTCTTAAACTTATTTCAAGATTGTTTGTACATGGATGTGACTTGTCCAAAACCTCTTGCATCTTTAGAGAACATGATCCACAGCTTAAAAAAACAAAAGAAAGAAAAGGACACCTCTTTTGGAAAAATCATGGCCAAGATAT

mRNA sequence

ATGGCGGACACCATGAACGACGACGACTGCGTTCAGGATTTGATCACCCAACAGCGTTCCGAAATCCTTTCCGCCAAAACCCTTTTCTCTGATCTCGATTTCGCCTTCCAACTTCAACTCCAGGAGGCAATGGATGCCTCTCTTGCTTCTAAACCCTCCACCGACTCATCTTCCTCACTTAACACCCCCGACCCTGTCTTGGATTCTGAAGACACTAGCGGTTTAGACTTGGCTACCACTCTTATGCTCGAAGACATTGCGAGGTTTGCTATGGAGTTCAAGGACCGGGAGCAATGTCAGACTGAAATGAGGAAAATGAAGGAGGAGCTTGATCGTCGGATTCATGATCAGAAGTTTGCGGAATTTATTCGGAGTGTTCCTGAGAATGAGTGGAGGGAGTATGGGGATAATTATGAGAAGCCGTATGGTGAAAGTTCATCGTCTTCTTCTTCTTCTTCTTCTTCTTCCTGGAGTGTGGACTCTGAATGTTGTAGGGTGTATTCGAAGGGGTTGATTAGTGAAGAGAGGATTAGAGATATGGTGGTTAGGGTTGCTGGAATTGGGGTTGCGGTTTGTGATCCTAAGGATAATCTGTTGTTTGAGAAGATGAGTCCTATAGAATCTATGGTGGAAGGTAAAGAAACCAGCAGCGAATGCGCTGAGCTTGAAGCGCTGGTTGAAGGTCTCAATGTTGCTCTTATTTTAGGCTTGAAAACTGTCACATTTTTCTGTGCTGATTACATGCTCTACCAGTATCTTACAGGTAGGGTGCCTCCAGCAACAAGCTCCACGGAAAAATTGGTTAATGAGGTGGTTGTTCTTCAGGGAAAATTTACATACTGTAACCCATCTCTCGTGACACGTAATGATATCAAGTTTGCTTTCAAACTTGCAAGAGAGGCTATAGTTTCTCAAATCACCTGGCCTGCACAAGCTGAAAATGGAAAGTGCTTGAAGGAAGAAACTTGCACAATTTGCTTTGAAGATGTTAGTGTGGATCAGATGTTCTCAGTTGATGGTTGTTTGCACAGATACTGCTTTTCTTGTATGAAACAGCATGTAGAAGTAAGGTTGCTGAACGGGAATGGGATGCAGGCAAACTGTCCACATCAGGGTTGTACGTCTGAGCTTAATATTGAAAGCTGCGGAAAGTTCTTGGAACCTAAGGTGTTTGAGATTATGAGCCAAAGAATTAAGGAAGCTTCTGTGCCTGTTCAGGAGAAAGTTTATTGCCCCTATTCCAGGTGCTCAGCATTAATGTCCAAAACAGATCTGTTAAGATACACCGAGGCTTTTTATATTGATGCGGAACGAACTGGGGCAAGGAAGTGCATGAAATGTAATCAGTTTTTCTGTATAAATTGCAAGGTCGCTTGGCATTATAACCTGACTTGCTACGACCACAGAAAGTTGAATCCCAATCTCCATCCAGATGAGAAAATGCTGAAGTCTCTTGCAACAAGGAAACTTTGGCGCCAATGCATTGTGTGTAACAATATGGTTGAATTGGCGGAAGGCTGCTATCACATCACCTGCAGCACCCAATAA

Coding sequence (CDS)

ATGGCGGACACCATGAACGACGACGACTGCGTTCAGGATTTGATCACCCAACAGCGTTCCGAAATCCTTTCCGCCAAAACCCTTTTCTCTGATCTCGATTTCGCCTTCCAACTTCAACTCCAGGAGGCAATGGATGCCTCTCTTGCTTCTAAACCCTCCACCGACTCATCTTCCTCACTTAACACCCCCGACCCTGTCTTGGATTCTGAAGACACTAGCGGTTTAGACTTGGCTACCACTCTTATGCTCGAAGACATTGCGAGGTTTGCTATGGAGTTCAAGGACCGGGAGCAATGTCAGACTGAAATGAGGAAAATGAAGGAGGAGCTTGATCGTCGGATTCATGATCAGAAGTTTGCGGAATTTATTCGGAGTGTTCCTGAGAATGAGTGGAGGGAGTATGGGGATAATTATGAGAAGCCGTATGGTGAAAGTTCATCGTCTTCTTCTTCTTCTTCTTCTTCTTCCTGGAGTGTGGACTCTGAATGTTGTAGGGTGTATTCGAAGGGGTTGATTAGTGAAGAGAGGATTAGAGATATGGTGGTTAGGGTTGCTGGAATTGGGGTTGCGGTTTGTGATCCTAAGGATAATCTGTTGTTTGAGAAGATGAGTCCTATAGAATCTATGGTGGAAGGTAAAGAAACCAGCAGCGAATGCGCTGAGCTTGAAGCGCTGGTTGAAGGTCTCAATGTTGCTCTTATTTTAGGCTTGAAAACTGTCACATTTTTCTGTGCTGATTACATGCTCTACCAGTATCTTACAGGTAGGGTGCCTCCAGCAACAAGCTCCACGGAAAAATTGGTTAATGAGGTGGTTGTTCTTCAGGGAAAATTTACATACTGTAACCCATCTCTCGTGACACGTAATGATATCAAGTTTGCTTTCAAACTTGCAAGAGAGGCTATAGTTTCTCAAATCACCTGGCCTGCACAAGCTGAAAATGGAAAGTGCTTGAAGGAAGAAACTTGCACAATTTGCTTTGAAGATGTTAGTGTGGATCAGATGTTCTCAGTTGATGGTTGTTTGCACAGATACTGCTTTTCTTGTATGAAACAGCATGTAGAAGTAAGGTTGCTGAACGGGAATGGGATGCAGGCAAACTGTCCACATCAGGGTTGTACGTCTGAGCTTAATATTGAAAGCTGCGGAAAGTTCTTGGAACCTAAGGTGTTTGAGATTATGAGCCAAAGAATTAAGGAAGCTTCTGTGCCTGTTCAGGAGAAAGTTTATTGCCCCTATTCCAGGTGCTCAGCATTAATGTCCAAAACAGATCTGTTAAGATACACCGAGGCTTTTTATATTGATGCGGAACGAACTGGGGCAAGGAAGTGCATGAAATGTAATCAGTTTTTCTGTATAAATTGCAAGGTCGCTTGGCATTATAACCTGACTTGCTACGACCACAGAAAGTTGAATCCCAATCTCCATCCAGATGAGAAAATGCTGAAGTCTCTTGCAACAAGGAAACTTTGGCGCCAATGCATTGTGTGTAACAATATGGTTGAATTGGCGGAAGGCTGCTATCACATCACCTGCAGCACCCAATAA

Protein sequence

MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSLNTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFAEFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDMVVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLAREAIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITCSTQ
BLAST of CsaV3_1G013060 vs. NCBI nr
Match: XP_004147300.2 (PREDICTED: uncharacterized protein LOC101222498 [Cucumis sativus] >KGN64756.1 hypothetical protein Csa_1G088460 [Cucumis sativus])

HSP 1 Score: 1010.7 bits (2612), Expect = 1.7e-291
Identity = 512/512 (100.00%), Postives = 512/512 (100.00%), Query Frame = 0

Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL
Sbjct: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA
Sbjct: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXSVDSECCRVYSKGLISEERIRDM 180
           EFIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXSVDSECCRVYSKGLISEERIRDM
Sbjct: 121 EFIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXSVDSECCRVYSKGLISEERIRDM 180

Query: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240
           VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV
Sbjct: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240

Query: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300
           TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE
Sbjct: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300

Query: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360
           AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN
Sbjct: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360

Query: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420
           GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM
Sbjct: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420

Query: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480
           SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK
Sbjct: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480

Query: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           MLKSLATRKLWRQCIVCNNMVELAEGCYHITC
Sbjct: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 512

BLAST of CsaV3_1G013060 vs. NCBI nr
Match: XP_008463535.1 (PREDICTED: uncharacterized protein LOC103501665 [Cucumis melo])

HSP 1 Score: 948.3 bits (2450), Expect = 1.0e-272
Identity = 476/512 (92.97%), Postives = 496/512 (96.88%), Query Frame = 0

Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADT+NDDDCVQ+LITQQRSE+LSAKTLFSDLD+AFQLQLQEAMDASL S PS +SSSSL
Sbjct: 1   MADTLNDDDCVQELITQQRSELLSAKTLFSDLDYAFQLQLQEAMDASLTSIPSIESSSSL 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           NT DPVLDSE+TSGLDLATTLMLEDIARFAMEFKDRE CQTEMRKMKEELDRRIHDQKFA
Sbjct: 61  NTADPVLDSEETSGLDLATTLMLEDIARFAMEFKDREHCQTEMRKMKEELDRRIHDQKFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXSVDSECCRVYSKGLISEERIRDM 180
           E+IRSVPENEWREYGDNYEKPYGE   XXXXXXXXX +VDSEC RVYSKGLISEERIRD 
Sbjct: 121 EYIRSVPENEWREYGDNYEKPYGE--SXXXXXXXXXWNVDSECFRVYSKGLISEERIRDT 180

Query: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240
           VVRVAGIG+AVCDPKDNLLFEKMSPIESMVEGKETS+ECAELEALVEGLNVALILGLK++
Sbjct: 181 VVRVAGIGIAVCDPKDNLLFEKMSPIESMVEGKETSNECAELEALVEGLNVALILGLKSI 240

Query: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300
           TFFCADYMLYQYLTGRVPPATSST KLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE
Sbjct: 241 TFFCADYMLYQYLTGRVPPATSSTAKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300

Query: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360
           AIVSQITWPA+A+NG CLK ETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEV+LLN
Sbjct: 301 AIVSQITWPAEADNGNCLK-ETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVKLLN 360

Query: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420
           GNGMQANCPHQGCTSE+NIESCGKFLEPKVFEIMSQRIKEASVP+QEKVYCPYSRCSALM
Sbjct: 361 GNGMQANCPHQGCTSEVNIESCGKFLEPKVFEIMSQRIKEASVPIQEKVYCPYSRCSALM 420

Query: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480
           SKT+LLRYTEA YIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYD+R LNPNLHPDE+
Sbjct: 421 SKTELLRYTEASYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDYRNLNPNLHPDEQ 480

Query: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           MLKSLATRKLWRQCIVCNNMVELAEGCYHITC
Sbjct: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 509

BLAST of CsaV3_1G013060 vs. NCBI nr
Match: XP_022157931.1 (uncharacterized protein LOC111024540 [Momordica charantia])

HSP 1 Score: 836.6 bits (2160), Expect = 4.4e-239
Identity = 426/516 (82.56%), Postives = 465/516 (90.12%), Query Frame = 0

Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADTM+DDD +Q+++++QRSE+L+AKTLFSDLD AFQLQLQEAM+ASL SKPST  S S 
Sbjct: 1   MADTMDDDDYLQEVVSEQRSELLAAKTLFSDLDLAFQLQLQEAMNASLDSKPSTQPSPSR 60

Query: 61  NTPDPVLDSED-TSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKF 120
           N   P L+SED +S LDLATTLMLEDIARFAMEFKDREQC TEMRKMKEELDRRIHDQ F
Sbjct: 61  NRVVPKLESEDSSSALDLATTLMLEDIARFAMEFKDREQCHTEMRKMKEELDRRIHDQNF 120

Query: 121 AEFIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXS---VDSECCRVYSKGLISEER 180
           A +IR+VPE+EWR YGDNYEKPY  XXXXXXXXXXXXX+   +DSE  RVYSKGLISEER
Sbjct: 121 ATYIRNVPEDEWRRYGDNYEKPYSGXXXXXXXXXXXXXARVCLDSEIFRVYSKGLISEER 180

Query: 181 IRDMVVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILG 240
           IRDM VRVA IGVAVCDPKDNLLFEKM P+ES+V+GKE +SECAELEALVEGLNVALILG
Sbjct: 181 IRDMKVRVAAIGVAVCDPKDNLLFEKMMPLESVVDGKEINSECAELEALVEGLNVALILG 240

Query: 241 LKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFK 300
           LK VTFFCADYMLYQYLTGRVPP  SS   LVNEV++LQ +FTYCNPSLVTRND+KFAFK
Sbjct: 241 LKNVTFFCADYMLYQYLTGRVPPGASSLATLVNEVILLQRRFTYCNPSLVTRNDMKFAFK 300

Query: 301 LAREAIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEV 360
           LAREAIVSQITWP +A NGKCLK+ETC ICFEDV VDQMFSVDGCLHRYCFSCMKQHVEV
Sbjct: 301 LAREAIVSQITWPTEAGNGKCLKKETCIICFEDVRVDQMFSVDGCLHRYCFSCMKQHVEV 360

Query: 361 RLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRC 420
           RLLNGNGM+ NCPHQGCTS +NIESCGKFLEPKV EIMSQRIKEASVP+ EKVYCPYSRC
Sbjct: 361 RLLNGNGMKVNCPHQGCTSGINIESCGKFLEPKVIEIMSQRIKEASVPILEKVYCPYSRC 420

Query: 421 SALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLH 480
           SALMSK++LL+YTEA +I AE++GARKCMKCNQFFCINCKV WHYNLTCYD+RK NPN  
Sbjct: 421 SALMSKSELLKYTEASFIGAEQSGARKCMKCNQFFCINCKVPWHYNLTCYDYRKSNPNPR 480

Query: 481 PDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           PDE MLKSLA+RKLWRQC+ CNNMVELAEGCYHITC
Sbjct: 481 PDETMLKSLASRKLWRQCVKCNNMVELAEGCYHITC 516

BLAST of CsaV3_1G013060 vs. NCBI nr
Match: XP_023519052.1 (uncharacterized protein LOC111782521 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 791.6 bits (2043), Expect = 1.6e-225
Identity = 403/519 (77.65%), Postives = 452/519 (87.09%), Query Frame = 0

Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADT+ DDD +QDLIT+QRSEIL+AKTL SDLD A+QLQ+QEAMDASL SK S+   +S+
Sbjct: 1   MADTV-DDDYLQDLITEQRSEILAAKTLISDLDLAYQLQMQEAMDASLGSKSSSKRPASV 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           N   PVL+SE+T  LD ATTL+LEDIAR AME KDREQCQ EMRKMKEE+DRRIHDQ FA
Sbjct: 61  NRVVPVLESEETGALDFATTLLLEDIARIAMEHKDREQCQAEMRKMKEEIDRRIHDQNFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXS-------VDSECCRVYSKGLIS 180
            +I +VP++EW +YGDNYE     XXXXXXXXXXXXX        +DSEC RVYSKGLIS
Sbjct: 121 NYILNVPDDEWSKYGDNYEXXXXXXXXXXXXXXXXXXXXXXXRGLLDSECFRVYSKGLIS 180

Query: 181 EERIRDMVVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVAL 240
           EERIRDM VRVAGIGVAVCDPKDNLLFEK  P+ES+V+GKETS ECAELEALVEGLN+AL
Sbjct: 181 EERIRDMTVRVAGIGVAVCDPKDNLLFEKTRPLESVVDGKETSCECAELEALVEGLNIAL 240

Query: 241 ILGLKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKF 300
           +LGLK VTFFCADYMLYQY+   V P +SS   +VNEV +LQGKFTYCNPSLVTRNDIKF
Sbjct: 241 VLGLKKVTFFCADYMLYQYIIRSVAPGSSSMATVVNEVSLLQGKFTYCNPSLVTRNDIKF 300

Query: 301 AFKLAREAIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQH 360
           AF+LAREAIVSQITWPA++ENGKCLK ETCTICFED+ VDQMFSVDGCLHRYCFSCMKQ 
Sbjct: 301 AFRLAREAIVSQITWPAESENGKCLK-ETCTICFEDICVDQMFSVDGCLHRYCFSCMKQD 360

Query: 361 VEVRLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPY 420
           +E+RLLNGNGMQANCPH GCTSE+NIESCGKFL+ +V +I+SQRIKEAS+PV EKVYCPY
Sbjct: 361 LEIRLLNGNGMQANCPHLGCTSEINIESCGKFLDSRVIDIISQRIKEASMPVLEKVYCPY 420

Query: 421 SRCSALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNP 480
           SRCSALMSK++LL+Y+EA Y DAERTGARKCMKCN FFCINCK  WHYN+TCYD RKLNP
Sbjct: 421 SRCSALMSKSELLKYSEASYFDAERTGARKCMKCNLFFCINCKAPWHYNMTCYDFRKLNP 480

Query: 481 NLHPDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
            L PDE+MLKSLA++KLWRQC+ CN MVELAEGCYHITC
Sbjct: 481 VLRPDEEMLKSLASKKLWRQCVACNTMVELAEGCYHITC 517

BLAST of CsaV3_1G013060 vs. NCBI nr
Match: XP_022964983.1 (uncharacterized protein LOC111464930 [Cucurbita moschata])

HSP 1 Score: 788.1 bits (2034), Expect = 1.8e-224
Identity = 403/519 (77.65%), Postives = 451/519 (86.90%), Query Frame = 0

Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADT+ DDD +QDLIT+QRSEIL+AKTL SDLD A+QLQ+QEAM+ASL SK S+   +++
Sbjct: 1   MADTV-DDDYLQDLITEQRSEILAAKTLISDLDLAYQLQMQEAMNASLGSKSSSKGPATV 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           N   PVL+SE+T  LD ATTL+LEDIAR AME KDREQCQ EMRKMKEELDRRIHDQ FA
Sbjct: 61  NRVVPVLESEETGALDFATTLLLEDIARIAMEHKDREQCQAEMRKMKEELDRRIHDQNFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXS-------VDSECCRVYSKGLIS 180
            +I +VP++EW +YGDNY      XXXXXXXXXXXXX        +DSEC RVYSKGLIS
Sbjct: 121 NYILNVPDDEWSKYGDNYXXXXXXXXXXXXXXXXXXXXXXXXRGLLDSECFRVYSKGLIS 180

Query: 181 EERIRDMVVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVAL 240
           EERIRDM VRVAGIGVAVCDPKDNLLFEK  P+ES+V+GKETS ECAELEALVEGL++AL
Sbjct: 181 EERIRDMTVRVAGIGVAVCDPKDNLLFEKTRPLESVVDGKETSCECAELEALVEGLHIAL 240

Query: 241 ILGLKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKF 300
           +LGLK VTFFCADYMLYQY+   V P +SS   LVNEV +LQGKFTYCNPSLVTRNDIKF
Sbjct: 241 VLGLKKVTFFCADYMLYQYIIRSVAPGSSSMATLVNEVSLLQGKFTYCNPSLVTRNDIKF 300

Query: 301 AFKLAREAIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQH 360
           AF+LAREAIVSQITWPA++ENGKCLK ETCTICFEDV VDQMFSVDGCLHRYCFSCMKQ 
Sbjct: 301 AFRLAREAIVSQITWPAESENGKCLK-ETCTICFEDVCVDQMFSVDGCLHRYCFSCMKQD 360

Query: 361 VEVRLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPY 420
           +E+RLLNGNGMQANCPH GCTSE+NIESCGKFL+ +V EI+SQRIKEAS+PV EKVYCPY
Sbjct: 361 LEIRLLNGNGMQANCPHLGCTSEINIESCGKFLDSRVIEIISQRIKEASMPVLEKVYCPY 420

Query: 421 SRCSALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNP 480
           SRCSALMSK++LL+Y+EA Y DAERTGARKCMKCN FFCINCK  WHYN+TCYD RKLNP
Sbjct: 421 SRCSALMSKSELLKYSEASYFDAERTGARKCMKCNLFFCINCKAPWHYNMTCYDFRKLNP 480

Query: 481 NLHPDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
            L PDE+MLKSLA++KLWRQC+ CN MVELAEGCYHITC
Sbjct: 481 VLRPDEEMLKSLASKKLWRQCVTCNTMVELAEGCYHITC 517

BLAST of CsaV3_1G013060 vs. TAIR10
Match: AT5G60250.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 340.1 bits (871), Expect = 2.4e-93
Identity = 162/349 (46.42%), Postives = 229/349 (65.62%), Query Frame = 0

Query: 165 RVYSKGLISEERIR-DMVVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELE 224
           R+Y KGL+S+E  +  M   V+G GVA+CD +DNLLFE   P+         S + AEL+
Sbjct: 146 RLYFKGLVSDENGKGKMTDVVSGFGVAICDQRDNLLFEMKGPLID----NGMSRQGAELK 205

Query: 225 ALVEGLNVALILGLKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNP 284
           AL+ GL  AL LG+K + FFC  Y ++QY+TG+          L++++  +   F+    
Sbjct: 206 ALIRGLTEALKLGIKHIVFFCDSYPIFQYVTGKWMAKQKKISLLLDDLQSIMQHFSSYQH 265

Query: 285 SLVTRNDIKFAFKLAREAIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLH 344
            LV RND+KFA+KLARE+I+S +T        K + +E C ICF D+  + MFSVD C H
Sbjct: 266 VLVARNDVKFAYKLARESILSMVTPHEDPRQAKAVLKEECAICFNDIVAEGMFSVDKCRH 325

Query: 345 RYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASV 404
           R+CF C+KQHVEV+LL  +GM   CPH GC SEL I++CGK L PK+ ++  QR++E ++
Sbjct: 326 RFCFQCVKQHVEVKLL--HGMAPKCPHDGCKSELVIDACGKLLTPKLSKLWQQRLQENAI 385

Query: 405 PVQEKVYCPYSRCSALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNL 464
           PV E+VYCPY RCSALMSKT +    ++      ++G R+C++C   FC++CKV WH NL
Sbjct: 386 PVTERVYCPYPRCSALMSKTKISESAKSLLSLYPKSGVRRCVECRGLFCVDCKVPWHGNL 445

Query: 465 TCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           +C +++KL+P    D+  LKSLA  K+WRQC  C +M+EL++GC HITC
Sbjct: 446 SCTEYKKLHPEPPADDVKLKSLANNKMWRQCGKCQHMIELSQGCNHITC 488

BLAST of CsaV3_1G013060 vs. TAIR10
Match: AT2G25370.1 (RING/U-box superfamily protein)

HSP 1 Score: 275.8 bits (704), Expect = 5.5e-74
Identity = 150/356 (42.13%), Postives = 213/356 (59.83%), Query Frame = 0

Query: 159 VDSECCRVYSKGLISEERIRDMVVRV--AGIGVAVCDPKDNLLFEKMSPIESMVEGKETS 218
           +D+   R+  KGL++ E + D V +   AG GVA+CD KDNLL E    I+  +   E S
Sbjct: 149 MDNVVYRLCFKGLVNYEAVADDVEKAVKAGFGVAICDEKDNLLHE----IKESLRDIEIS 208

Query: 219 SECAELEALVEGLNVALILGLKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQG 278
               E+ ALV GL+ +  LG++ V  +C D  +YQ + GR   +    + LV EV  +  
Sbjct: 209 RRGVEIMALVRGLSESFDLGMRNVVIYCDDDWIYQSIIGR-GKSKKKIDHLVEEVQGILE 268

Query: 279 KFTYCNPSLVTRNDIKFAFKLAREAIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMF 338
           K    +  LV RND+KFAF+LAREAI  + +    AE G     ETC I FE+  V+ MF
Sbjct: 269 KMACIDAVLVARNDVKFAFRLAREAI-GRNSVDVNAEQG-----ETCGIFFEETDVEHMF 328

Query: 339 SVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQ 398
             + CLHR+CF C+KQHV+V+L +G   +  C   GC  +L +E C K L  K+ E+  Q
Sbjct: 329 VTEKCLHRHCFPCVKQHVKVKLRSGT--EPTCLEYGCKFKLTLERCSKVLTLKLIEMWKQ 388

Query: 399 RIKEASVPVQEKVYCPYSRCSALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCK 458
           ++KE S+P  E++YCPY  CS LMSKT+L         +A+ +  R C+KC   FCI+CK
Sbjct: 389 KMKEDSIPAAERIYCPYPNCSMLMSKTELSS-------EADLSNVRTCVKCCGLFCIDCK 448

Query: 459 VAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           V  H +L+  D++KL+P+   D+  LKSLA  K+WRQC+ C +M+EL+ GC H+TC
Sbjct: 449 VPSHTDLSYDDYKKLHPDPLVDDLKLKSLANDKMWRQCVKCRHMIELSHGCNHMTC 484

BLAST of CsaV3_1G013060 vs. TAIR10
Match: AT3G45580.1 (RING/U-box protein with C6HC-type zinc finger)

HSP 1 Score: 259.2 bits (661), Expect = 5.3e-69
Identity = 142/349 (40.69%), Postives = 204/349 (58.45%), Query Frame = 0

Query: 165 RVYSKGLISEERIRDMVVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEA 224
           R+Y KGL+SEE +      +AG GVA+CD  DNLLF+     E + + + T  E  E+ A
Sbjct: 29  RLYFKGLVSEETVE----LLAGFGVAICDKDDNLLFQMK---EQVHDSRVTVLE-VEIMA 88

Query: 225 LVEGLNVALILGLKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPS 284
           L  GL  A+ LG+  ++ +   Y +++ +  +   A  +   L++ V  ++ + T   P 
Sbjct: 89  LKRGLTEAVGLGIDNISIYSDHYRIFELVMEKSASAEENFALLMDNVQHIRQRLTSSFPV 148

Query: 285 LVTRNDIKFAFKLAREAIVSQITWPAQAENGKCLKEETCTICFED-VSVDQMFSVDGCLH 344
           LVTRN IKF ++LA E IVS+I+            ++TC+IC +D    + MFSV  C H
Sbjct: 149 LVTRNQIKFVYELAMETIVSEISIHIPDH------DKTCSICSDDNFEPELMFSVALCGH 208

Query: 345 RYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASV 404
            +C  C+K+H+EVRLL G      C H  C S+L + +C   L  K+  +   RI+E S+
Sbjct: 209 EFCVECVKRHIEVRLLAGG--VPRCLHYQCESKLTLANCANLLTSKLKAMWELRIEEESI 268

Query: 405 PVQEKVYCPYSRCSALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNL 464
           PV+E+VYCP  RCS+LMS T L   T       E    R C+KC + FCINCK+ WH NL
Sbjct: 269 PVEERVYCPNPRCSSLMSVTKLSNSTR------EDVTMRSCVKCGEPFCINCKLPWHSNL 328

Query: 465 TCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           +C D++ L PN   D+  LK+LA +K+WRQC  C N++EL+EGC HITC
Sbjct: 329 SCNDYKSLGPNPTADDIKLKALANQKMWRQCENCKNVIELSEGCMHITC 355

BLAST of CsaV3_1G013060 vs. TAIR10
Match: AT5G37560.1 (RING/U-box superfamily protein)

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-68
Identity = 141/356 (39.61%), Postives = 205/356 (57.58%), Query Frame = 0

Query: 159 VDSECCRVYSKGLISEERIRD--MVVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETS 218
           VD+   ++Y KGL+S E   D   +V+V G GVA+CD  DNL +     +   V  +E  
Sbjct: 31  VDNVVYKLYFKGLVSGETATDKKAIVKV-GFGVAICDEADNLFYGMNKSLYEAVINREE- 90

Query: 219 SECAELEALVEGLNVALILGLKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQG 278
              A++ AL+ GL  ++  G+K V   C D  +YQ + GR  P   +   L+ EV  L+G
Sbjct: 91  ---ADILALITGLYESIHRGVKNVVICCDDRQIYQTIIGREKPQQKNVH-LLEEVQRLRG 150

Query: 279 KFTYCNPSLVTRNDIKFAFKLAREAIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMF 338
           +       LV   D  FA +LA +A+V      A  E     K  TC+IC +    + M 
Sbjct: 151 RLASTGTVLVATRDDNFALRLAIDALVK-----ATQE-----KPLTCSICSDKTDAEHML 210

Query: 339 SVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQ 398
             D CLHR+CFSC+KQ V+V+L   +G+   C   GC SEL +ESC   L PK+ E+  +
Sbjct: 211 LNDKCLHRHCFSCVKQQVKVKL--RSGIVPPCLEDGCKSELTLESCSMVLTPKLIEMWKR 270

Query: 399 RIKEASVPVQEKVYCPYSRCSALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCK 458
           +++E  +P  EK+YCPY  CS LMSKT+L R       +AE++  R C+KC++ FCI+CK
Sbjct: 271 KMEEDLIPDAEKIYCPYRSCSMLMSKTELSR-------EAEQSNVRACIKCSELFCIDCK 330

Query: 459 VAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           V WH +L+C D+++++     ++ MLK LA  ++WRQC  C +M+EL EGC HITC
Sbjct: 331 VPWHSDLSCADYKRIHSERLVNDMMLKVLANDQMWRQCSECKHMIELTEGCNHITC 361

BLAST of CsaV3_1G013060 vs. TAIR10
Match: AT2G21420.1 (IBR domain containing protein)

HSP 1 Score: 256.1 bits (653), Expect = 4.5e-68
Identity = 149/355 (41.97%), Postives = 203/355 (57.18%), Query Frame = 0

Query: 160 DSECCRVYSKGLISEERIRDMVVRV-AGIGVAVCDPKDNLLFEKMSPIESMVEGKET-SS 219
           DS   R++ KGL+S+E   DM   V AG G+A+CD  + LL+     ++  + G +  + 
Sbjct: 46  DSLVYRLFFKGLVSDETTTDMEEIVKAGFGIAICDEANTLLYN----MKKSLNGDDVINP 105

Query: 220 ECAELEALVEGLNVALILGLKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGK 279
           E  E++AL+  LNV++ + L+ V   C DY ++Q LTGR  P  +    LV +V  L+GK
Sbjct: 106 EEVEIKALICVLNVSIQMELRNVMICCGDYQIFQILTGRGKPQQNIVH-LVEQVQHLRGK 165

Query: 280 FTYCNPSLVTRNDIKFAFKLAREAIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFS 339
            +     LV R D+     LA EAI                  ETC IC E+   D+MF 
Sbjct: 166 LSSTEVVLVPRADV---IILAIEAIGG----------------ETCCICRENTDADRMFF 225

Query: 340 VDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQR 399
            + C HR CFSC+ +HV+  LL   G+   C H  C SEL  ESC K L P + E   ++
Sbjct: 226 TENCFHRQCFSCVNRHVQRMLL--CGISPTCLHFPCNSELTFESCSKVLTPNLIEFWKRK 285

Query: 400 IKEASVPVQEKVYCPYSRCSALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKV 459
           I+E  VP  +K+YCPY RCS LMSKT L R T       +++  R C+KC + FCI+CKV
Sbjct: 286 IEEDLVPAADKIYCPYRRCSMLMSKTALSRET-------DQSNVRACIKCCRLFCIDCKV 345

Query: 460 AWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
             H  L+C D++KLNP+   D K LKSLA +K WRQC+ C+N+VEL EGC HITC
Sbjct: 346 PSHAGLSCVDYKKLNPDPLYDVK-LKSLANKKKWRQCVQCSNLVELFEGCNHITC 366

BLAST of CsaV3_1G013060 vs. Swiss-Prot
Match: sp|P0CE10|DEAHB_ARATH (ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01020 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.4e-12
Identity = 48/195 (24.62%), Postives = 83/195 (42.56%), Query Frame = 0

Query: 320  EETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNI 379
            E  C IC  +  VD  +S++GC H +C +C+ +  E  + N +     C H  C + + +
Sbjct: 1558 ELECPICLSE--VDDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVV 1617

Query: 380  ESCGKFL-EPKVFEIMSQRIKEASVPVQEKV-YCPYSRCSALMSKTDLLRYTEAFYIDAE 439
                  L + K+ E++S  +         K+ +C    C ++          E F     
Sbjct: 1618 ADMRALLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQESGEPFI---- 1677

Query: 440  RTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVC 499
                  C  C+   C  C + +H  +TC  ++K   N  PD   LK  A  K  ++C +C
Sbjct: 1678 ------CGACHSETCTRCHLEYHPLITCERYKKFKEN--PD-LSLKDWAKGKDVKECPIC 1737

Query: 500  NNMVELAEGCYHITC 513
             + +E  +GC H+ C
Sbjct: 1738 KSTIEKTDGCNHLQC 1737

BLAST of CsaV3_1G013060 vs. Swiss-Prot
Match: sp|F4KGU4|DEAHC_ARATH (ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g10370 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 9.7e-12
Identity = 48/195 (24.62%), Postives = 81/195 (41.54%), Query Frame = 0

Query: 320  EETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNI 379
            E  C IC  +  VD  +S++GC H +C +C+ +  E  + N +     C H  C + + +
Sbjct: 1561 EVECPICLSE--VDDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVL 1620

Query: 380  ESCGKFL-EPKVFEIMSQRIKEASVPVQEKV-YCPYSRCSALMSKTDLLRYTEAFYIDAE 439
                  L + K+ E+ S  +         K  +C    C ++          E F     
Sbjct: 1621 ADMRALLSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVAGPQESGEPFI---- 1680

Query: 440  RTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVC 499
                  C  C+   C  C + +H  +TC  ++K   N  PD   LK  A  K  ++C +C
Sbjct: 1681 ------CGACHSEICTRCHLEYHPLITCERYKKFKEN--PD-LSLKDWAKGKNVKECPIC 1740

Query: 500  NNMVELAEGCYHITC 513
             + +E  +GC H+ C
Sbjct: 1741 KSTIEKTDGCNHMKC 1740

BLAST of CsaV3_1G013060 vs. Swiss-Prot
Match: sp|A4IIY1|R144A_XENTR (Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis OX=8364 GN=rnf144a PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.4e-10
Identity = 44/196 (22.45%), Postives = 79/196 (40.31%), Query Frame = 0

Query: 322 TCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNIES 381
           +C +C  + +V+QM ++  C   +C  C+KQ+VE+ +  G     +CP   C    +++ 
Sbjct: 19  SCKLCLGEYTVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDASCPKRGHLQE 78

Query: 382 CGKFLEPKVFEIMSQRIKEASVPVQE-----KVYCPYSRCSALMSKTDLLRYTEAFYIDA 441
               +E  V   + Q+ K+     +      + +CP S C A+    +            
Sbjct: 79  --NEIECMVAAEIMQKYKKLQFEKEILLDPCRTWCPSSSCQAVCKLQEK---------GI 138

Query: 442 ERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIV 501
           +     +C  C+  FC  CK  WH    C ++  +           KSL      ++C  
Sbjct: 139 QNPQLVQCSACDIEFCSACKANWHPGQGCPENMAITFLPGDSSSFFKSLEDDVPIKRCPK 198

Query: 502 CNNMVELAEGCYHITC 513
           C   +E  EGC  + C
Sbjct: 199 CKVYIERDEGCAQMMC 203

BLAST of CsaV3_1G013060 vs. Swiss-Prot
Match: sp|Q9LVW9|ARI4_ARATH (Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana OX=3702 GN=ARI4 PE=5 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 1.1e-04
Identity = 43/197 (21.83%), Postives = 76/197 (38.58%), Query Frame = 0

Query: 319 KEETCTICF-EDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSEL 378
           K   C IC  ED+S   M  ++ C HR+C  C K+H  VR+  G G +  C    C +  
Sbjct: 115 KTMKCDICMEEDLSKYAMTRME-CGHRFCNDCWKEHFTVRINEGEGKRIRCMAYKCNT-- 174

Query: 379 NIESCGKFLEPKVFEIMSQRIKEASVPVQEKV-YCPYS-RCSALMSKTDLLRYTEAFYID 438
             +   + +  ++ E   + + E+ V     V +CP +  C   +              D
Sbjct: 175 ICDEARQLVSTELAEKFDRFLIESYVEDNNMVKWCPSTPHCGNAIRNIK----------D 234

Query: 439 AERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCI 498
                  +C  C   FC +C    H   +C   +        + + +  +      + C 
Sbjct: 235 DGDVDEVEC-SCGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWMTVNT--KLCP 294

Query: 499 VCNNMVELAEGCYHITC 513
            C+  ++  +GC H+TC
Sbjct: 295 KCSKPIQKRDGCNHMTC 295

BLAST of CsaV3_1G013060 vs. TrEMBL
Match: tr|A0A0A0LXM8|A0A0A0LXM8_CUCSA (RBR-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G088460 PE=3 SV=1)

HSP 1 Score: 1010.7 bits (2612), Expect = 1.1e-291
Identity = 512/512 (100.00%), Postives = 512/512 (100.00%), Query Frame = 0

Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL
Sbjct: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA
Sbjct: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXSVDSECCRVYSKGLISEERIRDM 180
           EFIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXSVDSECCRVYSKGLISEERIRDM
Sbjct: 121 EFIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXSVDSECCRVYSKGLISEERIRDM 180

Query: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240
           VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV
Sbjct: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240

Query: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300
           TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE
Sbjct: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300

Query: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360
           AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN
Sbjct: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360

Query: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420
           GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM
Sbjct: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420

Query: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480
           SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK
Sbjct: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480

Query: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           MLKSLATRKLWRQCIVCNNMVELAEGCYHITC
Sbjct: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 512

BLAST of CsaV3_1G013060 vs. TrEMBL
Match: tr|A0A1S3CJH8|A0A1S3CJH8_CUCME (RBR-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103501665 PE=3 SV=1)

HSP 1 Score: 948.3 bits (2450), Expect = 6.9e-273
Identity = 476/512 (92.97%), Postives = 496/512 (96.88%), Query Frame = 0

Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADT+NDDDCVQ+LITQQRSE+LSAKTLFSDLD+AFQLQLQEAMDASL S PS +SSSSL
Sbjct: 1   MADTLNDDDCVQELITQQRSELLSAKTLFSDLDYAFQLQLQEAMDASLTSIPSIESSSSL 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           NT DPVLDSE+TSGLDLATTLMLEDIARFAMEFKDRE CQTEMRKMKEELDRRIHDQKFA
Sbjct: 61  NTADPVLDSEETSGLDLATTLMLEDIARFAMEFKDREHCQTEMRKMKEELDRRIHDQKFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXSVDSECCRVYSKGLISEERIRDM 180
           E+IRSVPENEWREYGDNYEKPYGE   XXXXXXXXX +VDSEC RVYSKGLISEERIRD 
Sbjct: 121 EYIRSVPENEWREYGDNYEKPYGE--SXXXXXXXXXWNVDSECFRVYSKGLISEERIRDT 180

Query: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240
           VVRVAGIG+AVCDPKDNLLFEKMSPIESMVEGKETS+ECAELEALVEGLNVALILGLK++
Sbjct: 181 VVRVAGIGIAVCDPKDNLLFEKMSPIESMVEGKETSNECAELEALVEGLNVALILGLKSI 240

Query: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300
           TFFCADYMLYQYLTGRVPPATSST KLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE
Sbjct: 241 TFFCADYMLYQYLTGRVPPATSSTAKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300

Query: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360
           AIVSQITWPA+A+NG CLK ETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEV+LLN
Sbjct: 301 AIVSQITWPAEADNGNCLK-ETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVKLLN 360

Query: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420
           GNGMQANCPHQGCTSE+NIESCGKFLEPKVFEIMSQRIKEASVP+QEKVYCPYSRCSALM
Sbjct: 361 GNGMQANCPHQGCTSEVNIESCGKFLEPKVFEIMSQRIKEASVPIQEKVYCPYSRCSALM 420

Query: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480
           SKT+LLRYTEA YIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYD+R LNPNLHPDE+
Sbjct: 421 SKTELLRYTEASYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDYRNLNPNLHPDEQ 480

Query: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           MLKSLATRKLWRQCIVCNNMVELAEGCYHITC
Sbjct: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 509

BLAST of CsaV3_1G013060 vs. TrEMBL
Match: tr|A0A251NMJ3|A0A251NMJ3_PRUPE (RBR-type E3 ubiquitin transferase OS=Prunus persica OX=3760 GN=PRUPE_6G094500 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 7.9e-168
Identity = 302/511 (59.10%), Postives = 385/511 (75.34%), Query Frame = 0

Query: 3   DTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSLNT 62
           D   D D +  ++++QR ++++AKTL SDLD AF+LQ+QEAM ASLA  P          
Sbjct: 2   DDRTDPDDLHTILSEQRRDLMAAKTLDSDLDMAFKLQMQEAMSASLALNPXXXXXXXXXX 61

Query: 63  PDPVLDSEDTSG-LDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFAE 122
                        LDLA TLMLED+ RFA E++D E+  +EM K KE+L+RRIHDQKFA 
Sbjct: 62  XXXXXXXXXXDAILDLAATLMLEDVERFAQEWEDHERTVSEMMKTKEDLNRRIHDQKFAA 121

Query: 123 FIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXSVDSECCRVYSKGLISEERIRDMV 182
            +  VP++ W ++GD YE+PY      XXXXXXXX +V++E  R+Y KGL+SEER+RDM 
Sbjct: 122 DLCDVPDDYWAKHGDYYERPY-SADESXXXXXXXXAAVETENLRLYCKGLVSEERVRDMK 181

Query: 183 VRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTVT 242
           V VAG GVA+CDP+DNL+FE    +E++ +G   S+E AELEA++EGLN AL L LK+VT
Sbjct: 182 VVVAGAGVAICDPRDNLIFEARKNLEAVADGVVLSNEAAELEAIIEGLNKALTLDLKSVT 241

Query: 243 FFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLAREA 302
           F+C DYMLYQY+T RV P  S    LVN+V +LQ KF YC+PSLVTR DIKFA K+AREA
Sbjct: 242 FYCDDYMLYQYVTNRVRPGNSKVATLVNQVALLQRKFEYCSPSLVTRTDIKFALKVAREA 301

Query: 303 IVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNG 362
           IVSQITW A + NGK LK ETC ICFE+  V +MFS+DGCLHRYC SCMKQHVEV+ LNG
Sbjct: 302 IVSQITWRADSSNGKSLK-ETCVICFEETDVAEMFSIDGCLHRYCCSCMKQHVEVKFLNG 361

Query: 363 NGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALMS 422
            G  A CPH+GC +E+NI+SC KFL PK+ E +SQRIKE+S+PV +KVYCP  RCSALMS
Sbjct: 362 MG--AECPHEGCKNEVNIDSCAKFLAPKLVEAISQRIKESSIPVTDKVYCPNPRCSALMS 421

Query: 423 KTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKM 482
           K ++L YT+  ++ AE+TGAR+CMKC+ +FCINCKV WH+N+TCYD+++ +P  H ++++
Sbjct: 422 KKEVLEYTKTTFVRAEQTGARRCMKCHYYFCINCKVPWHFNMTCYDYKRSHPYPHREDQL 481

Query: 483 LKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           L SLAT+KLWRQC+ CN+MVELAEGCYHITC
Sbjct: 482 LNSLATKKLWRQCVKCNHMVELAEGCYHITC 508

BLAST of CsaV3_1G013060 vs. TrEMBL
Match: tr|M5W805|M5W805_PRUPE (RBR-type E3 ubiquitin transferase (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa025188mg PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 7.9e-168
Identity = 302/511 (59.10%), Postives = 385/511 (75.34%), Query Frame = 0

Query: 3   DTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSLNT 62
           D   D D +  ++++QR ++++AKTL SDLD AF+LQ+QEAM ASLA  P          
Sbjct: 2   DDRTDPDDLHTILSEQRRDLMAAKTLDSDLDMAFKLQMQEAMSASLALNPXXXXXXXXXX 61

Query: 63  PDPVLDSEDTSG-LDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFAE 122
                        LDLA TLMLED+ RFA E++D E+  +EM K KE+L+RRIHDQKFA 
Sbjct: 62  XXXXXXXXXXDAILDLAATLMLEDVERFAQEWEDHERTVSEMMKTKEDLNRRIHDQKFAA 121

Query: 123 FIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXSVDSECCRVYSKGLISEERIRDMV 182
            +  VP++ W ++GD YE+PY      XXXXXXXX +V++E  R+Y KGL+SEER+RDM 
Sbjct: 122 DLCDVPDDYWAKHGDYYERPY-SADESXXXXXXXXAAVETENLRLYCKGLVSEERVRDMK 181

Query: 183 VRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTVT 242
           V VAG GVA+CDP+DNL+FE    +E++ +G   S+E AELEA++EGLN AL L LK+VT
Sbjct: 182 VVVAGAGVAICDPRDNLIFEARKNLEAVADGVVLSNEAAELEAIIEGLNKALTLDLKSVT 241

Query: 243 FFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLAREA 302
           F+C DYMLYQY+T RV P  S    LVN+V +LQ KF YC+PSLVTR DIKFA K+AREA
Sbjct: 242 FYCDDYMLYQYVTNRVRPGNSKVATLVNQVALLQRKFEYCSPSLVTRTDIKFALKVAREA 301

Query: 303 IVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNG 362
           IVSQITW A + NGK LK ETC ICFE+  V +MFS+DGCLHRYC SCMKQHVEV+ LNG
Sbjct: 302 IVSQITWRADSSNGKSLK-ETCVICFEETDVAEMFSIDGCLHRYCCSCMKQHVEVKFLNG 361

Query: 363 NGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALMS 422
            G  A CPH+GC +E+NI+SC KFL PK+ E +SQRIKE+S+PV +KVYCP  RCSALMS
Sbjct: 362 MG--AECPHEGCKNEVNIDSCAKFLAPKLVEAISQRIKESSIPVTDKVYCPNPRCSALMS 421

Query: 423 KTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKM 482
           K ++L YT+  ++ AE+TGAR+CMKC+ +FCINCKV WH+N+TCYD+++ +P  H ++++
Sbjct: 422 KKEVLEYTKTTFVRAEQTGARRCMKCHYYFCINCKVPWHFNMTCYDYKRSHPYPHREDQL 481

Query: 483 LKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           L SLAT+KLWRQC+ CN+MVELAEGCYHITC
Sbjct: 482 LNSLATKKLWRQCVKCNHMVELAEGCYHITC 508

BLAST of CsaV3_1G013060 vs. TrEMBL
Match: tr|A0A251NMM0|A0A251NMM0_PRUPE (RBR-type E3 ubiquitin transferase OS=Prunus persica OX=3760 GN=PRUPE_6G094500 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 7.9e-168
Identity = 302/511 (59.10%), Postives = 385/511 (75.34%), Query Frame = 0

Query: 3   DTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSLNT 62
           D   D D +  ++++QR ++++AKTL SDLD AF+LQ+QEAM ASLA  P          
Sbjct: 2   DDRTDPDDLHTILSEQRRDLMAAKTLDSDLDMAFKLQMQEAMSASLALNPXXXXXXXXXX 61

Query: 63  PDPVLDSEDTSG-LDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFAE 122
                        LDLA TLMLED+ RFA E++D E+  +EM K KE+L+RRIHDQKFA 
Sbjct: 62  XXXXXXXXXXDAILDLAATLMLEDVERFAQEWEDHERTVSEMMKTKEDLNRRIHDQKFAA 121

Query: 123 FIRSVPENEWREYGDNYEKPYGEXXXXXXXXXXXXXSVDSECCRVYSKGLISEERIRDMV 182
            +  VP++ W ++GD YE+PY      XXXXXXXX +V++E  R+Y KGL+SEER+RDM 
Sbjct: 122 DLCDVPDDYWAKHGDYYERPY-SADESXXXXXXXXAAVETENLRLYCKGLVSEERVRDMK 181

Query: 183 VRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTVT 242
           V VAG GVA+CDP+DNL+FE    +E++ +G   S+E AELEA++EGLN AL L LK+VT
Sbjct: 182 VVVAGAGVAICDPRDNLIFEARKNLEAVADGVVLSNEAAELEAIIEGLNKALTLDLKSVT 241

Query: 243 FFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLAREA 302
           F+C DYMLYQY+T RV P  S    LVN+V +LQ KF YC+PSLVTR DIKFA K+AREA
Sbjct: 242 FYCDDYMLYQYVTNRVRPGNSKVATLVNQVALLQRKFEYCSPSLVTRTDIKFALKVAREA 301

Query: 303 IVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNG 362
           IVSQITW A + NGK LK ETC ICFE+  V +MFS+DGCLHRYC SCMKQHVEV+ LNG
Sbjct: 302 IVSQITWRADSSNGKSLK-ETCVICFEETDVAEMFSIDGCLHRYCCSCMKQHVEVKFLNG 361

Query: 363 NGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALMS 422
            G  A CPH+GC +E+NI+SC KFL PK+ E +SQRIKE+S+PV +KVYCP  RCSALMS
Sbjct: 362 MG--AECPHEGCKNEVNIDSCAKFLAPKLVEAISQRIKESSIPVTDKVYCPNPRCSALMS 421

Query: 423 KTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKM 482
           K ++L YT+  ++ AE+TGAR+CMKC+ +FCINCKV WH+N+TCYD+++ +P  H ++++
Sbjct: 422 KKEVLEYTKTTFVRAEQTGARRCMKCHYYFCINCKVPWHFNMTCYDYKRSHPYPHREDQL 481

Query: 483 LKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           L SLAT+KLWRQC+ CN+MVELAEGCYHITC
Sbjct: 482 LNSLATKKLWRQCVKCNHMVELAEGCYHITC 508

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004147300.21.7e-291100.00PREDICTED: uncharacterized protein LOC101222498 [Cucumis sativus] >KGN64756.1 hy... [more]
XP_008463535.11.0e-27292.97PREDICTED: uncharacterized protein LOC103501665 [Cucumis melo][more]
XP_022157931.14.4e-23982.56uncharacterized protein LOC111024540 [Momordica charantia][more]
XP_023519052.11.6e-22577.65uncharacterized protein LOC111782521 [Cucurbita pepo subsp. pepo][more]
XP_022964983.11.8e-22477.65uncharacterized protein LOC111464930 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT5G60250.12.4e-9346.42zinc finger (C3HC4-type RING finger) family protein[more]
AT2G25370.15.5e-7442.13RING/U-box superfamily protein[more]
AT3G45580.15.3e-6940.69RING/U-box protein with C6HC-type zinc finger[more]
AT5G37560.12.0e-6839.61RING/U-box superfamily protein[more]
AT2G21420.14.5e-6841.97IBR domain containing protein[more]
Match NameE-valueIdentityDescription
sp|P0CE10|DEAHB_ARATH7.4e-1224.62ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
sp|F4KGU4|DEAHC_ARATH9.7e-1224.62ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
sp|A4IIY1|R144A_XENTR2.4e-1022.45Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis OX=8364 GN=rn... [more]
sp|Q9LVW9|ARI4_ARATH1.1e-0421.83Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana OX=3702 GN=ARI... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LXM8|A0A0A0LXM8_CUCSA1.1e-291100.00RBR-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G088460 PE=... [more]
tr|A0A1S3CJH8|A0A1S3CJH8_CUCME6.9e-27392.97RBR-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103501665 PE=3 S... [more]
tr|A0A251NMJ3|A0A251NMJ3_PRUPE7.9e-16859.10RBR-type E3 ubiquitin transferase OS=Prunus persica OX=3760 GN=PRUPE_6G094500 PE... [more]
tr|M5W805|M5W805_PRUPE7.9e-16859.10RBR-type E3 ubiquitin transferase (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_... [more]
tr|A0A251NMM0|A0A251NMM0_PRUPE7.9e-16859.10RBR-type E3 ubiquitin transferase OS=Prunus persica OX=3760 GN=PRUPE_6G094500 PE... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR017907Znf_RING_CS
IPR031127E3_UB_ligase_RBR
IPR036397RNaseH_sf
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR002867IBR_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G013060.1CsaV3_1G013060.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002867IBR domainSMARTSM00647ibrneu5coord: 392..465
e-value: 3.1E-12
score: 56.6
IPR002867IBR domainPFAMPF01485IBRcoord: 394..465
e-value: 1.0E-12
score: 48.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 317..403
e-value: 7.8E-17
score: 63.1
NoneNo IPR availablePFAMPF13456RVT_3coord: 184..301
e-value: 1.4E-17
score: 63.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..72
NoneNo IPR availablePANTHERPTHR11685:SF217TRANSLATION TERMINATION INHIBITOR PROTEIN ITT1coord: 30..512
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 320..404
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 480..513
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 323..369
e-value: 6.1E-5
score: 22.7
IPR036397Ribonuclease H superfamilyGENE3DG3DSA:3.30.420.10coord: 165..303
e-value: 1.1E-8
score: 37.2
IPR031127E3 ubiquitin ligase RBR familyPANTHERPTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGcoord: 30..512
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 341..350
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 323..369
score: 9.509

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G013060CSPI01G12890Wild cucumber (PI 183967)cpicucB001
CsaV3_1G013060CSPI06G16220Wild cucumber (PI 183967)cpicucB320
CsaV3_1G013060Cucsa.207410Cucumber (Gy14) v1cgycucB332
CsaV3_1G013060CmaCh20G004680Cucurbita maxima (Rimu)cmacucB0649
CsaV3_1G013060CmaCh02G008720Cucurbita maxima (Rimu)cmacucB0693
CsaV3_1G013060CmoCh20G005030Cucurbita moschata (Rifu)cmocucB0634
CsaV3_1G013060CmoCh02G008710Cucurbita moschata (Rifu)cmocucB0678
CsaV3_1G013060Cp4.1LG16g05570Cucurbita pepo (Zucchini)cpecucB0332
CsaV3_1G013060Cp4.1LG20g09090Cucurbita pepo (Zucchini)cpecucB0635
CsaV3_1G013060CsGy6G015740Cucumber (Gy14) v2cgybcucB256
CsaV3_1G013060CsGy1G012970Cucumber (Gy14) v2cgybcucB002
CsaV3_1G013060Cla005054Watermelon (97103) v1cucwmB015
CsaV3_1G013060Cla000546Watermelon (97103) v1cucwmB080
CsaV3_1G013060MELO3C025743Melon (DHL92) v3.5.1cucmeB009
CsaV3_1G013060MELO3C005007Melon (DHL92) v3.5.1cucmeB010
CsaV3_1G013060ClCG02G020920Watermelon (Charleston Gray)cucwcgB035
CsaV3_1G013060ClCG03G002380Watermelon (Charleston Gray)cucwcgB040
CsaV3_1G013060Lsi02G014430Bottle gourd (USVL1VR-Ls)cuclsiB025
CsaV3_1G013060Lsi10G012930Bottle gourd (USVL1VR-Ls)cuclsiB002
CsaV3_1G013060MELO3C005007.2Melon (DHL92) v3.6.1cucmedB009
CsaV3_1G013060MELO3C025743.2Melon (DHL92) v3.6.1cucmedB008
CsaV3_1G013060Cla97C02G046940Watermelon (97103) v2cucwmbB028
CsaV3_1G013060Cla97C03G053410Watermelon (97103) v2cucwmbB032
CsaV3_1G013060Bhi10G000477Wax gourdcucwgoB022
CsaV3_1G013060Bhi08G000252Wax gourdcucwgoB051
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_1G013060CsaV3_6G021590Cucumber (Chinese Long) v3cuccucB055
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G013060Silver-seed gourdcarcucB0474
CsaV3_1G013060Cucurbita maxima (Rimu)cmacucB0234
CsaV3_1G013060Cucurbita maxima (Rimu)cmacucB0518
CsaV3_1G013060Cucurbita moschata (Rifu)cmocucB0221
CsaV3_1G013060Cucurbita moschata (Rifu)cmocucB0505
CsaV3_1G013060Cucurbita pepo (Zucchini)cpecucB0657