CsaV3_1G012890 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ACGGGAATCAATTCTATAAAAGATAGAGTGTTCTTGATTTATATAAGAGGCACGATCATTGAGCAATCTGCTGATATGTTTCGATGGGCTGGAGGAAGGGAGATTCCATATCGTAGAGATTACGTTGTACTAATATCGCAAAATGACAAAAAGAAGGTGAATCTGTCTGTTACCCTCCAAGCAAATCCAGATGACTCTAAGACTAG ACGGGAATCAATTCTATAAAAGATAGAGTGTTCTTGATTTATATAAGAGGCACGATCATTGAGCAATCTGCTGATATGTTTCGATGGGCTGGAGGAAGGGAGATTCCATATCGTAGAGATTACGTTGTACTAATATCGCAAAATGACAAAAAGAAGGTGAATCTGTCTGTTACCCTCCAAGCAAATCCAGATGACTCTAAGACTAG ACGGGAATCAATTCTATAAAAGATAGAGTGTTCTTGATTTATATAAGAGGCACGATCATTGAGCAATCTGCTGATATGTTTCGATGGGCTGGAGGAAGGGAGATTCCATATCGTAGAGATTACGTTGTACTAATATCGCAAAATGACAAAAAGAAGGTGAATCTGTCTGTTACCCTCCAAGCAAATCCAGATGACTCTAAGACTAG TGINSIKDRVFLIYIRGTIIEQSADMFRWAGGREIPYRRDYVVLISQNDKKKVNLSVTLQANPDDSKTX
BLAST of CsaV3_1G012890 vs. NCBI nr
Match: KGN64737.1 (hypothetical protein Csa_1G084850 [Cucumis sativus]) HSP 1 Score: 139.0 bits (349), Expect = 5.9e-30 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of CsaV3_1G012890 vs. NCBI nr
Match: XP_004137258.1 (PREDICTED: receptor-like protein kinase FERONIA [Cucumis sativus] >KGN53792.1 hypothetical protein Csa_4G129580 [Cucumis sativus]) HSP 1 Score: 116.7 bits (291), Expect = 3.1e-23 Identity = 55/66 (83.33%), Postives = 62/66 (93.94%), Query Frame = 0
BLAST of CsaV3_1G012890 vs. NCBI nr
Match: XP_008464587.1 (PREDICTED: receptor-like protein kinase FERONIA [Cucumis melo]) HSP 1 Score: 107.8 bits (268), Expect = 1.5e-20 Identity = 52/66 (78.79%), Postives = 59/66 (89.39%), Query Frame = 0
BLAST of CsaV3_1G012890 vs. NCBI nr
Match: KGN53790.1 (hypothetical protein Csa_4G129560 [Cucumis sativus]) HSP 1 Score: 93.6 bits (231), Expect = 2.8e-16 Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of CsaV3_1G012890 vs. NCBI nr
Match: XP_011654352.1 (PREDICTED: receptor-like protein kinase FERONIA [Cucumis sativus]) HSP 1 Score: 93.6 bits (231), Expect = 2.8e-16 Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of CsaV3_1G012890 vs. TAIR10
Match: AT3G51550.1 (Malectin/receptor-like protein kinase family protein) HSP 1 Score: 43.1 bits (100), Expect = 8.0e-05 Identity = 20/63 (31.75%), Postives = 32/63 (50.79%), Query Frame = 0
BLAST of CsaV3_1G012890 vs. TrEMBL
Match: tr|A0A0A0LV96|A0A0A0LV96_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G084850 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 3.9e-30 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of CsaV3_1G012890 vs. TrEMBL
Match: tr|A0A0A0KZI5|A0A0A0KZI5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G129580 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.1e-23 Identity = 55/66 (83.33%), Postives = 62/66 (93.94%), Query Frame = 0
BLAST of CsaV3_1G012890 vs. TrEMBL
Match: tr|A0A1S3CLU9|A0A1S3CLU9_CUCME (receptor-like protein kinase FERONIA OS=Cucumis melo OX=3656 GN=LOC103502432 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 9.6e-21 Identity = 52/66 (78.79%), Postives = 59/66 (89.39%), Query Frame = 0
BLAST of CsaV3_1G012890 vs. TrEMBL
Match: tr|A0A0A0KVY1|A0A0A0KVY1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G129560 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.9e-16 Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of CsaV3_1G012890 vs. TrEMBL
Match: tr|A0A2P5E977|A0A2P5E977_9ROSA (Mitogen-activated protein kinase kinase kinase OS=Trema orientalis OX=63057 GN=TorRG33x02_220660 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.0e-10 Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |