CsaV3_1G012520 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGATTAGGTTGAAGCATGTATGGCATATGTGGTAACACCTCTTGGAAAAAAGATTAGTTGTATGTAGAACCTTAATAAAGTTGTTTGTTTTGCATTATTAACCCCATTTGGAAGTAAAAACATAAGATGAAATGAAACAGTAAGCTTAGAAACAAAGAATAGTAAAGAATAGTAAAGAATAGGAGGATATAGGAATGTAATTGAATGTGTTGATAAAGAAAGGTGAAAAAGCATAGAGATTTTGTGGTAAATGTAAAATAAAAGGATGACATAAATGAATGAAAGTCAAACACAAAAAAAGAGATTTATAAAAGGGTTGGAGATGGAAGGGGTAAAGCGATAAGAAATGAAAGTAATTTATGATTGATTGAATTAGAAAAGTGAAAGAGTATAATAAAGATGGAAGAAGAAGAGAGAAGTAGAAATGTAGTAATGATTCAATGTAAAGTAAAAAAAGAAAAGAAAAGAGTTGAGTTGGAAGGTGGGAAGGTAGGATGAAGGAGCGTGGGGGGTGGGGGTGATGGAGAAATGGGAAGGTAACTGGGAAGACAGTGATGGTGAGAGTAGCGAAACCCTCGTAGGATTGTGTCGCGTGGGGTTAAGAAGATCTGCATAATAGAGGGAGCCACGCGTCAACCTTTGGTCGGTACTACGTTTATGGGCCCCTCCATCCTAAACGCGGGGACCCAATAACAATCAACCAAACCCCCAACCATTTTCTTTTTCTTTTTCTTTTTTTTCTATTTCATATTTCTTCTTAATACAATATATGTATTTTTTTTATTATTGTCAAATGGAAAATTCCGAAATTACCCTGGACATGGGGCAAGTTCCCTTGCATGGGGGGGTGGGTTCAAGTATTGAATACCAGCCGTTGGATAACGCGACAAAAAACCCAGATGATGTTTGGAATCAATGACGCGGTTAAGCTTGTTACACGACACGTAGCATGGGGACACAATCCCCATCCCATCCTCAGCAGTCAAAATCCCTCATTTTGACTATGCAATTTCTATTTCTTTTTTTTATTATTATTTTTTTTAAATTCTAAAATTCCAAAAATTCTTTTCTATAAAACCCCGAATCCCTCCCTTCCCATTTCCTCTATAATCAACATACAATCAATCCATCGCATTACCGTTTCCTCCCAATACTCACAAAAAAAAATTACTATGGCGCCGAGAGACAAGGTTAAGACGGCGGCGGCGGCGGTGTCGGCGCCTCCCGGGTCTAAGGACATGGAGGTGCATTTTAGAGGGGTGAGGAAGAGGCCATGGGGGAGATACGCGGCGGAGATTAGAGATCCGGCTAAGAAAAGCCGTGTCTGGTTAGGCACGTTTGACACGGCGGAGGAAGCCGCGAGGGCTTACGACGCCGCCGCCCGCAAATTCCGTGGCGCCAAGGCTAAAACTAATTTTCCCTTTCCGCCTACCGTCAACGATCTTAATCTGAGTCCTAGTCGGAGTAGTACCGTCGAATCTTCCAGCCGGGACCCCACTGATTTTGACCTTAATCAGGCTGCCGCTGGATCTAGGCTGCCGTTTCCTTTCCAACAGCATCAATTCGGAGGAGGGATTTTCCCTCAACAAGCCAATCAATTTCGGTTCTTGGATCATCCCATTTTCCGAAACGGAACGGAATCCGGTGTGATTTACGATCGTCACCGTGTAAAGGCGGTGGTCCAGTGCGGCGGAGTTCAAAGTGACTCAGATTCATCCTCTGTTATTAATCTGAACCAAAACGATGACCACAAATCAAGACCCGCTCTAGATCTCGATCTCAATTTCCCTCCACCGGACTCCGCTTAGGTTTTGATTATCCATGTCCATGAATTTTTTTTAATTCTCTCCATGTAAATTAATACACGTGTACTAGAAATTTAAAAAAAAAAAAAAAGACAAAAACAAAGGAGACTATGGGAGTTGTTGGTTGGGTTCGGTTTCTGTTATGGATATATATGAAGGTGAGGGTAGGCTGCAGCCCAGATCGTCGTGGCGGAGCGAACGATTATTCGAGGCGGGAGAAGAGATTAATATTTAGATGCACTCAATCTGTTTACATCCAAATGGGGAGAAAATTTATAAATATTTTCTATACAATTTTGTCGAATTAGAAAAAGAAAAATATGAATATAGTTTAAAATGTTTAGTAATTTTTTTAAGATTTCATATGTACTCTTTTTTGACATGTGTTGGATTTCTACATGTCGTTTTCTGTCTCATTTAACTTGTTCTTCAGCATAGTGTTGTGTGTCTTTTCTTTATTTTCAAAGGAAATGACAATTTGTGGTAATTTCTTTTCCTTTCACTGTGCCTTTCCATTATCATCTGTCTTTACTTATTTCCTTCTTCACTTCTGTTTATTTTTATCTTCACGTACTCCCTCCACTATAGCTATTTATGAAAGTTTGGCGGCCCACAGAAATCCCCTTCTTTCTTTTGCCCTTTTTGTTTTGTTTTGTTTAAATTATAAATTTGAAATTTTCGGATTTTGCTTGTGTTGGAGCGTGAGCCATTTGGGATGATGATTGTAACAAAATGATTCGGAATGGTTCCGATCTCTCTTCGGTGGCCTTAACTCAGGTGCAAATGGGTTGTCCTTGTCCATTATCTCTTATCATTTTTGTGGTTTGCTACTTGAATTTGGTTATTATTTGTCGCAATAAAACGAAAAGCTTATTAAAGCCCCTTTGGTACCCTGCAAAATTGGGTGTTGTTCGTTTTGATGGGGGCTTTCCTGTTATGCTTGATTATTCTACCCATCTCTTACTTATTGAATATGAATTTCGGGAGTTTTTTTTCTTCTCCCTTGCTCAGTGATCCCTTCCTTCTCAAGGCTGGCTCAACAGACAAAGCTGAATGCGCTTATTGAAAATTTTTAAATAGTAACTAGGTTACTATAATCTAAAATAGTTCTTGTCTTAAACGGGCCATAAAATGGTTTGTAGCTTCCTATTATAGAAATTTGCTTAAAAGTTTCCAAAATTCAAACCTTAACTCATATTTGGTATCGTAATGTGGAAAAAGATTTGAACACTTCAATTCAGTCCCTTGCTTGTCAACAGTTTTTGGAGTGTAATTTGATACGTGAATTTCTGGCTTGTTTTGTGTAAAAGATAACAATAATCCAAAATATATAATTTATTTAGTAAAGTGTGGGGACTAAATTTATAATTAGTCCATTATAGATAAAGAATAATGATGAAAATATGAGAGGTTTGACTAATAGATTTTGTCGTTTTATTTTGTATGAAAACAAAGGCGTTTGTGTTCCGTTTTTGATGGACACACTTCATGGAAATCTCTT ATGGCGCCGAGAGACAAGGTTAAGACGGCGGCGGCGGCGGTGTCGGCGCCTCCCGGGTCTAAGGACATGGAGGTGCATTTTAGAGGGGTGAGGAAGAGGCCATGGGGGAGATACGCGGCGGAGATTAGAGATCCGGCTAAGAAAAGCCGTGTCTGGTTAGGCACGTTTGACACGGCGGAGGAAGCCGCGAGGGCTTACGACGCCGCCGCCCGCAAATTCCGTGGCGCCAAGGCTAAAACTAATTTTCCCTTTCCGCCTACCGTCAACGATCTTAATCTGAGTCCTAGTCGGAGTAGTACCGTCGAATCTTCCAGCCGGGACCCCACTGATTTTGACCTTAATCAGGCTGCCGCTGGATCTAGGCTGCCGTTTCCTTTCCAACAGCATCAATTCGGAGGAGGGATTTTCCCTCAACAAGCCAATCAATTTCGGTTCTTGGATCATCCCATTTTCCGAAACGGAACGGAATCCGGTGTGATTTACGATCGTCACCGTGTAAAGGCGGTGGTCCAGTGCGGCGGAGTTCAAAGTGACTCAGATTCATCCTCTGTTATTAATCTGAACCAAAACGATGACCACAAATCAAGACCCGCTCTAGATCTCGATCTCAATTTCCCTCCACCGGACTCCGCTTAG ATGGCGCCGAGAGACAAGGTTAAGACGGCGGCGGCGGCGGTGTCGGCGCCTCCCGGGTCTAAGGACATGGAGGTGCATTTTAGAGGGGTGAGGAAGAGGCCATGGGGGAGATACGCGGCGGAGATTAGAGATCCGGCTAAGAAAAGCCGTGTCTGGTTAGGCACGTTTGACACGGCGGAGGAAGCCGCGAGGGCTTACGACGCCGCCGCCCGCAAATTCCGTGGCGCCAAGGCTAAAACTAATTTTCCCTTTCCGCCTACCGTCAACGATCTTAATCTGAGTCCTAGTCGGAGTAGTACCGTCGAATCTTCCAGCCGGGACCCCACTGATTTTGACCTTAATCAGGCTGCCGCTGGATCTAGGCTGCCGTTTCCTTTCCAACAGCATCAATTCGGAGGAGGGATTTTCCCTCAACAAGCCAATCAATTTCGGTTCTTGGATCATCCCATTTTCCGAAACGGAACGGAATCCGGTGTGATTTACGATCGTCACCGTGTAAAGGCGGTGGTCCAGTGCGGCGGAGTTCAAAGTGACTCAGATTCATCCTCTGTTATTAATCTGAACCAAAACGATGACCACAAATCAAGACCCGCTCTAGATCTCGATCTCAATTTCCCTCCACCGGACTCCGCTTAG MAPRDKVKTAAAAVSAPPGSKDMEVHFRGVRKRPWGRYAAEIRDPAKKSRVWLGTFDTAEEAARAYDAAARKFRGAKAKTNFPFPPTVNDLNLSPSRSSTVESSSRDPTDFDLNQAAAGSRLPFPFQQHQFGGGIFPQQANQFRFLDHPIFRNGTESGVIYDRHRVKAVVQCGGVQSDSDSSSVINLNQNDDHKSRPALDLDLNFPPPDSA
BLAST of CsaV3_1G012520 vs. NCBI nr
Match: XP_004146656.1 (PREDICTED: ethylene-responsive transcription factor 11 [Cucumis sativus] >KGN64701.1 hypothetical protein Csa_1G075060 [Cucumis sativus]) HSP 1 Score: 425.6 bits (1093), Expect = 9.7e-116 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. NCBI nr
Match: XP_008442824.1 (PREDICTED: ethylene-responsive transcription factor 8 [Cucumis melo]) HSP 1 Score: 402.5 bits (1033), Expect = 8.8e-109 Identity = 200/211 (94.79%), Postives = 204/211 (96.68%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. NCBI nr
Match: XP_023542234.1 (ethylene-responsive transcription factor 11-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 300.4 bits (768), Expect = 4.7e-78 Identity = 164/213 (77.00%), Postives = 173/213 (81.22%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. NCBI nr
Match: XP_022955196.1 (ethylene-responsive transcription factor 11-like [Cucurbita moschata]) HSP 1 Score: 297.7 bits (761), Expect = 3.0e-77 Identity = 163/213 (76.53%), Postives = 172/213 (80.75%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. NCBI nr
Match: XP_022994473.1 (ethylene-responsive transcription factor 11-like [Cucurbita maxima]) HSP 1 Score: 297.4 bits (760), Expect = 4.0e-77 Identity = 164/213 (77.00%), Postives = 172/213 (80.75%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. TAIR10
Match: AT3G15210.1 (ethylene responsive element binding factor 4) HSP 1 Score: 139.4 bits (350), Expect = 2.5e-33 Identity = 98/208 (47.12%), Postives = 119/208 (57.21%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. TAIR10
Match: AT1G53170.1 (ethylene response factor 8) HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30 Identity = 88/185 (47.57%), Postives = 109/185 (58.92%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. TAIR10
Match: AT1G28370.1 (ERF domain protein 11) HSP 1 Score: 129.0 bits (323), Expect = 3.4e-30 Identity = 98/211 (46.45%), Postives = 116/211 (54.98%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. TAIR10
Match: AT5G44210.1 (erf domain protein 9) HSP 1 Score: 125.2 bits (313), Expect = 4.9e-29 Identity = 89/220 (40.45%), Postives = 114/220 (51.82%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. TAIR10
Match: AT1G28360.1 (ERF domain protein 12) HSP 1 Score: 112.8 bits (281), Expect = 2.5e-25 Identity = 58/76 (76.32%), Postives = 62/76 (81.58%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. Swiss-Prot
Match: sp|O80340|ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 4.5e-32 Identity = 98/208 (47.12%), Postives = 119/208 (57.21%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. Swiss-Prot
Match: sp|Q40477|ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.7e-31 Identity = 100/213 (46.95%), Postives = 118/213 (55.40%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. Swiss-Prot
Match: sp|Q9LW49|ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 2.2e-31 Identity = 97/208 (46.63%), Postives = 113/208 (54.33%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. Swiss-Prot
Match: sp|Q9MAI5|ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ERF8 PE=1 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.1e-29 Identity = 88/185 (47.57%), Postives = 109/185 (58.92%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. Swiss-Prot
Match: sp|Q9C5I3|ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=ERF11 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 6.1e-29 Identity = 98/211 (46.45%), Postives = 116/211 (54.98%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. TrEMBL
Match: tr|A0A0A0LXG4|A0A0A0LXG4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075060 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 6.4e-116 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. TrEMBL
Match: tr|A0A1S3B6N3|A0A1S3B6N3_CUCME (ethylene-responsive transcription factor 8 OS=Cucumis melo OX=3656 GN=LOC103486594 PE=4 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 5.8e-109 Identity = 200/211 (94.79%), Postives = 204/211 (96.68%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. TrEMBL
Match: tr|V7BSX1|V7BSX1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G183100g PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 3.5e-45 Identity = 129/222 (58.11%), Postives = 144/222 (64.86%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. TrEMBL
Match: tr|A0A2I4DWT6|A0A2I4DWT6_9ROSI (ethylene-responsive transcription factor 4-like OS=Juglans regia OX=51240 GN=LOC108984188 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.2e-44 Identity = 128/244 (52.46%), Postives = 141/244 (57.79%), Query Frame = 0
BLAST of CsaV3_1G012520 vs. TrEMBL
Match: tr|A0A2I4DTA1|A0A2I4DTA1_9ROSI (ethylene-responsive transcription factor 4-like OS=Juglans regia OX=51240 GN=LOC108983254 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.2e-44 Identity = 131/246 (53.25%), Postives = 145/246 (58.94%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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