CsaV3_1G010860 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G010860
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	15.4 kDa class V heat shock protein
Location	chr1 : 6744164 .. 6745308 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAAATGACCTCAAGGGACGCTGCAAGTTGCCGAAAAAATATCCAATGCTTTGTTATATTTAGAGGTTGAAAAGGCCTCTTCAAAATCCTATATCCATTCTCACCACTAACCACCCCCCGCCAAAACATCCAAAAATCTTCCTTCCCATCAACAATGGAGATTTCTACCTCTACTCCTCATCCCCTTCTCTTTCCTTACTACCATTACTCCATTCCCCATAATTACGTTCACTGGGTTCAAACCTCAGACTCTCATCTTTTCTCCGCCGATCTCCCTGGTACTTCCATTTTCCCCCATTCATTTCTACCCCACTTGGTTTTTATTTATTTATTTATTTTTACGTTCTCGTTCGTTAATTTTACGTGTAGGTGTTCGGAAGGAGGAGATAAAAGTGGAGGTTGAAGATTCGCGGTATCTGATCATTCGGACAGAGGCTGTGAATGGAGTTACTTCTCCGGCCAAGAGTTTCTCCAGGAAATTTCGACTTCCGGTTTTGGTTGATGTAGATGGAATTTCGGCTGGGTTTGAGAATGGGGTTTTGGAGATCACGGTACCAAGGTCGTCTTTTAGGAGAAGATCTGTTGTTCATTCTCCTGACCAACATCAACTTCTTGCCAGGGCTGCTTGATCGATCAATTTGAAAGCGAGTTTGCTGCCCTCTCTGCTTTCTATTTTCCATTTTTTTTCTCTTTTGGTTGGTTGGAAAATTGGAGAAATTTGAAGCTCTGTATTGTTAGTTTGTGATGAATAGGAAGAATTTATGTATCAACAAATTAAATTGTTGGGTTTACAAGTAGAAGTAAGTGTAGGATTGGATTGATCTGGTTAAATTTGGACTGCTTGATGTTTATTCAAATATTTTTATGAGTTCCATGTCCACTTGGTTACTTAATTTTGACAATAGGGATCAAGGCATTAAATTTAATGATAGAACACAACTTCTTATGTTCATGAATTTGATGGAGCAGCCTTTTTGGAGGGAGAAAACATGAACTGACCACATTTTACATTACCAATGAGATGAGTTTTTACAGTCAAAAGAGAGAAATAGTTAATGCTTCCACACCACTTTAGTTATATAATATTAAATTTTGTTACTGTAGATTTTGTGTTTTTTATTTTCTATATAAAAATTACTTCTTT

mRNA sequence

ATGGAGATTTCTACCTCTACTCCTCATCCCCTTCTCTTTCCTTACTACCATTACTCCATTCCCCATAATTACGTTCACTGGGTTCAAACCTCAGACTCTCATCTTTTCTCCGCCGATCTCCCTGGTGTTCGGAAGGAGGAGATAAAAGTGGAGGTTGAAGATTCGCGGTATCTGATCATTCGGACAGAGGCTGTGAATGGAGTTACTTCTCCGGCCAAGAGTTTCTCCAGGAAATTTCGACTTCCGGTTTTGGTTGATGTAGATGGAATTTCGGCTGGGTTTGAGAATGGGGTTTTGGAGATCACGGTACCAAGGTCGTCTTTTAGGAGAAGATCTGTTGTTCATTCTCCTGACCAACATCAACTTCTTGCCAGGGCTGCTTGA

Coding sequence (CDS)

ATGGAGATTTCTACCTCTACTCCTCATCCCCTTCTCTTTCCTTACTACCATTACTCCATTCCCCATAATTACGTTCACTGGGTTCAAACCTCAGACTCTCATCTTTTCTCCGCCGATCTCCCTGGTGTTCGGAAGGAGGAGATAAAAGTGGAGGTTGAAGATTCGCGGTATCTGATCATTCGGACAGAGGCTGTGAATGGAGTTACTTCTCCGGCCAAGAGTTTCTCCAGGAAATTTCGACTTCCGGTTTTGGTTGATGTAGATGGAATTTCGGCTGGGTTTGAGAATGGGGTTTTGGAGATCACGGTACCAAGGTCGTCTTTTAGGAGAAGATCTGTTGTTCATTCTCCTGACCAACATCAACTTCTTGCCAGGGCTGCTTGA

Protein sequence

MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQHQLLARAA

Homology

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BLAST of CsaV3_1G010860 vs. NCBI nr
Match: XP_004145106.1 (PREDICTED: 15.4 kDa class V heat shock protein [Cucumis sativus] >KGN64532.1 hypothetical protein Csa_1G063560 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 1.2e-65
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60
           MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII
Sbjct: 1   MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60

Query: 61  RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH 120
           RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH
Sbjct: 61  RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH 120

Query: 121 QLLARAA 128
           QLLARAA
Sbjct: 121 QLLARAA 127

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BLAST of CsaV3_1G010860 vs. NCBI nr
Match: XP_008441176.1 (PREDICTED: 15.4 kDa class V heat shock protein [Cucumis melo])

HSP 1 Score: 236.9 bits (603), Expect = 3.8e-59
Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60
           MEIS S P PLLFPYY Y+IPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII
Sbjct: 1   MEISISDPRPLLFPYYRYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60

Query: 61  RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH 120
           RTEAV+GVTSPAKSFSRKFRLPV+VDVDGISAGFENGVLEITVPRSSFRRR+V HSPDQ 
Sbjct: 61  RTEAVDGVTSPAKSFSRKFRLPVMVDVDGISAGFENGVLEITVPRSSFRRRAVAHSPDQL 120

Query: 121 QLLARAA 128
           QLLARAA
Sbjct: 121 QLLARAA 127

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BLAST of CsaV3_1G010860 vs. NCBI nr
Match: ADU55781.1 (HSP15 [Citrullus lanatus])

HSP 1 Score: 214.5 bits (545), Expect = 2.0e-52
Identity = 114/135 (84.44%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MEISTSTPHP--------LLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEISTS P          LLFPY+HY+IPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRS 120
           EDSRYLIIRTEAV+GVT PAKSFSRKFRLPVLVDVD ISAGFENGVLEITVPR SFRR S
Sbjct: 61  EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR-SFRRSS 120

Query: 121 VVHSPDQHQLLARAA 128
           V+HSPD  QLLARAA
Sbjct: 121 VIHSPD--QLLARAA 132

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BLAST of CsaV3_1G010860 vs. NCBI nr
Match: XP_023001317.1 (15.4 kDa class V heat shock protein [Cucurbita maxima])

HSP 1 Score: 206.8 bits (525), Expect = 4.3e-50
Identity = 110/137 (80.29%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 1   MEIST-------STPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVE 60
           MEIST       S P  LLFPYYHY++P NYVHW QTS+SH+FSADLPGVRKEEIKVEVE
Sbjct: 1   MEISTSHASLHNSLPPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEVE 60

Query: 61  DSRYLIIRTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSV 120
           DSRYLIIRT+AV+GVT PAKSFSRKFRLPVLVDVD ISAGFENGVLEITVPR SFR RSV
Sbjct: 61  DSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR-SFRTRSV 120

Query: 121 VH---SPDQHQLLARAA 128
           +H   SPDQ QLLARAA
Sbjct: 121 IHQTDSPDQLQLLARAA 136

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BLAST of CsaV3_1G010860 vs. NCBI nr
Match: XP_022933175.1 (15.4 kDa class V heat shock protein [Cucurbita moschata] >XP_023518998.1 15.4 kDa class V heat shock protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201.1 bits (510), Expect = 2.3e-48
Identity = 108/138 (78.26%), Postives = 115/138 (83.33%), Query Frame = 0


Query: 1   MEISTSTPHP--------LLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEISTS P          LLFPYYHY++P NYVHW QTS+SH+FSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRS 120
           EDSRYLIIRT+AV+GVT PAKSFSRKFRLPVLVDVD ISAGFENGVLEITVPR S R RS
Sbjct: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR-SLRTRS 120

Query: 121 VVH---SPDQHQLLARAA 128
           V+H   S DQ QLLARAA
Sbjct: 121 VIHQTDSSDQLQLLARAA 137

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BLAST of CsaV3_1G010860 vs. TAIR10
Match: AT4G21870.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 5.6e-28
Identity = 64/109 (58.72%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 23  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VNGVTSPAKSFSRKFR 82
           N+V W Q+ DSH FS DLPG+RKEEIKVE+EDS YLIIRTEA  ++    P K+F RKFR
Sbjct: 26  NHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFR 85

Query: 83  LPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHS--PDQHQLLARAA 128
           LP  +D+ GISAG+E+GVL + VP+    RR +  S  P+  QLLARAA
Sbjct: 86  LPESIDMIGISAGYEDGVLTVIVPKRIMTRRLIDPSDVPESLQLLARAA 134

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BLAST of CsaV3_1G010860 vs. TAIR10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 4.9e-16
Identity = 44/111 (39.64%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 19  SIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVNGV 78
           +I +  V W +T+++H+F ADLPG++KEE+KVE+ED   L I          + +  + V
Sbjct: 42  AIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRV 101

Query: 79  TSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPR-SSFRRRSVVHSPD 119
              +  FSRKFRLP  V +D + A  ENGVL +TVP+  + ++++ V S D
Sbjct: 102 ERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSID 152

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BLAST of CsaV3_1G010860 vs. TAIR10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-15
Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = 0


Query: 19  SIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVNGV 78
           +I +  V W +T+++H+F ADLPG++KEE+KVE+ED   L I          + +  + V
Sbjct: 44  AITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRV 103

Query: 79  TSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPR-SSFRRRSVVHSPD 119
              +  FSRKF+LP  V +D + A  ENGVL +TVP+    ++++ V S D
Sbjct: 104 ERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSID 154

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BLAST of CsaV3_1G010860 vs. TAIR10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 78.6 bits (192), Expect = 3.2e-15
Identity = 38/99 (38.38%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 25  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVNGVTSPAKS 84
           V W +T ++H+F ADLPG++KEE+KVE+E+   L I          + +  + V   +  
Sbjct: 48  VDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQ 107

Query: 85  FSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSV 114
           F+R+FRLP  V +D + A  ENGVL +TVP++  ++  V
Sbjct: 108 FTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADV 146

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BLAST of CsaV3_1G010860 vs. TAIR10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 78.2 bits (191), Expect = 4.1e-15
Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = 0


Query: 25  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVN----------GVTSPAKS 84
           V W +T ++H+F ADLPG+RKEE+KVEVED   L I  E  N           V   +  
Sbjct: 52  VDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGK 111

Query: 85  FSRKFRLPVLVDVDGISAGFENGVLEITVPR 106
           F+R+FRLP    ++ I A  ENGVL +TVP+
Sbjct: 112 FTRRFRLPENAKMEEIKASMENGVLSVTVPK 142

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BLAST of CsaV3_1G010860 vs. Swiss-Prot
Match: sp|O49710|HS154_ARATH (15.4 kDa class V heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP15.4 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.0e-26
Identity = 64/109 (58.72%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 23  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VNGVTSPAKSFSRKFR 82
           N+V W Q+ DSH FS DLPG+RKEEIKVE+EDS YLIIRTEA  ++    P K+F RKFR
Sbjct: 26  NHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFR 85

Query: 83  LPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHS--PDQHQLLARAA 128
           LP  +D+ GISAG+E+GVL + VP+    RR +  S  P+  QLLARAA
Sbjct: 86  LPESIDMIGISAGYEDGVLTVIVPKRIMTRRLIDPSDVPESLQLLARAA 134

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BLAST of CsaV3_1G010860 vs. Swiss-Prot
Match: sp|Q7EZ57|HS188_ORYSJ (18.8 kDa class V heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP18.8 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.7e-22
Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 23  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTE------AVNGVTSPAKSFS 82
           ++V W +T+ +HL+SA LPGVRKEEI+VEVED+ YL+IRTE               +SF+
Sbjct: 55  SHVSWEETAAAHLYSASLPGVRKEEIRVEVEDAMYLVIRTELDDXXXXXXXXXXXXRSFA 114

Query: 83  RKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVH 116
           RKFRLP +VD DGISA + +GVL +TVPR   R R VV+
Sbjct: 115 RKFRLPAMVDADGISAEYTHGVLRVTVPRLHTRARPVVN 153

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BLAST of CsaV3_1G010860 vs. Swiss-Prot
Match: sp|P27777|HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.0e-16
Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 25  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVNGVTSPAKS 84
           + W +T +SH+F ADLPGV+KEE+KVEVE+   L+I          + +  + V   +  
Sbjct: 45  IDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 104

Query: 85  FSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSV 114
           F R+FRLP    VD + AG ENGVL +TVP++  ++  V
Sbjct: 105 FMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEV 143

[Close]

BLAST of CsaV3_1G010860 vs. Swiss-Prot
Match: sp|Q943E6|HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.0e-16
Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 25  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVNGVTSPAKS 84
           + W +T +SH+F ADLPGV+KEE+KVEVE+   L+I          + +  + V   +  
Sbjct: 45  IDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 104

Query: 85  FSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSV 114
           F R+FRLP    VD + AG ENGVL +TVP++  ++  V
Sbjct: 105 FMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEV 143

[Close]

BLAST of CsaV3_1G010860 vs. Swiss-Prot
Match: sp|Q943E7|HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.0e-15
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 25  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVNGVTSPAKS 84
           V W +T +SH+F ADLPGV+KEE+KVEVE+   L+I          + +  + V   +  
Sbjct: 44  VDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 103

Query: 85  FSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSV 114
           F R+FRLP    VD + A  ENGVL +TVP++  ++  V
Sbjct: 104 FMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEV 142

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BLAST of CsaV3_1G010860 vs. TrEMBL
Match: tr|A0A0A0LUT8|A0A0A0LUT8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063560 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 8.2e-66
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60
           MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII
Sbjct: 1   MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60

Query: 61  RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH 120
           RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH
Sbjct: 61  RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH 120

Query: 121 QLLARAA 128
           QLLARAA
Sbjct: 121 QLLARAA 127

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BLAST of CsaV3_1G010860 vs. TrEMBL
Match: tr|A0A1S3B2U7|A0A1S3B2U7_CUCME (15.4 kDa class V heat shock protein OS=Cucumis melo OX=3656 GN=LOC103485389 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.5e-59
Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60
           MEIS S P PLLFPYY Y+IPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII
Sbjct: 1   MEISISDPRPLLFPYYRYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60

Query: 61  RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH 120
           RTEAV+GVTSPAKSFSRKFRLPV+VDVDGISAGFENGVLEITVPRSSFRRR+V HSPDQ 
Sbjct: 61  RTEAVDGVTSPAKSFSRKFRLPVMVDVDGISAGFENGVLEITVPRSSFRRRAVAHSPDQL 120

Query: 121 QLLARAA 128
           QLLARAA
Sbjct: 121 QLLARAA 127

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BLAST of CsaV3_1G010860 vs. TrEMBL
Match: tr|H6TB34|H6TB34_CITLA (HSP15 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.4e-52
Identity = 114/135 (84.44%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MEISTSTPHP--------LLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEISTS P          LLFPY+HY+IPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRS 120
           EDSRYLIIRTEAV+GVT PAKSFSRKFRLPVLVDVD ISAGFENGVLEITVPR SFRR S
Sbjct: 61  EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR-SFRRSS 120

Query: 121 VVHSPDQHQLLARAA 128
           V+HSPD  QLLARAA
Sbjct: 121 VIHSPD--QLLARAA 132

[Close]

BLAST of CsaV3_1G010860 vs. TrEMBL
Match: tr|A0A2N9F053|A0A2N9F053_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8370 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.0e-35
Identity = 88/138 (63.77%), Postives = 101/138 (73.19%), Query Frame = 0


Query: 1   MEISTSTPHP---------LLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVE 60
           ME+S S  +P         LLFP YH++ P NYVHW QT +SH+FSADLPGVRKEEIKVE
Sbjct: 1   MELSVSAFYPSWQYLYPSHLLFP-YHFT-PENYVHWTQTPESHMFSADLPGVRKEEIKVE 60

Query: 61  VEDSRYLIIRTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRR 120
           VEDSRYLIIRTEA+   + PAKSF RKFRLP  VD+DGISAG+ENGVL +TVPRS  RR 
Sbjct: 61  VEDSRYLIIRTEAIEESSVPAKSFMRKFRLPGRVDIDGISAGYENGVLTVTVPRSFRRRG 120

Query: 121 SVVHSPDQHQLL--ARAA 128
             +   DQ + L  ARAA
Sbjct: 121 FSIELADQPEQLEVARAA 136

[Close]

BLAST of CsaV3_1G010860 vs. TrEMBL
Match: tr|A0A2I4DM24|A0A2I4DM24_9ROSI (15.4 kDa class V heat shock protein OS=Juglans regia OX=51240 GN=LOC108981472 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.7e-35
Identity = 82/124 (66.13%), Postives = 97/124 (78.23%), Query Frame = 0


Query: 8   PHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVNG 67
           P  LLFPY+   IP NYVHW +T +SH+FSADLPGVRKEEIKVEVEDSRYLIIRTEAV+ 
Sbjct: 15  PTHLLFPYHF--IPENYVHWTETPESHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDE 74

Query: 68  VTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSV----VHSPDQHQLL 127
            + PAKSF RKFRLP ++D+DGISAG+E+GVL ITVPR  FRR          P+Q +++
Sbjct: 75  SSEPAKSFMRKFRLPGMIDLDGISAGYEDGVLTITVPR--FRRNGFYIDPADKPEQLEVV 134

The following BLAST results are available for this feature:

BLAST of CsaV3_1G010860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145106.1	1.2e-65	100.00	PREDICTED: 15.4 kDa class V heat shock protein [Cucumis sativus] >KGN64532.1 hyp...	[more]
XP_008441176.1	3.8e-59	92.13	PREDICTED: 15.4 kDa class V heat shock protein [Cucumis melo]	[more]
ADU55781.1	2.0e-52	84.44	HSP15 [Citrullus lanatus]	[more]
XP_023001317.1	4.3e-50	80.29	15.4 kDa class V heat shock protein [Cucurbita maxima]	[more]
XP_022933175.1	2.3e-48	78.26	15.4 kDa class V heat shock protein [Cucurbita moschata] >XP_023518998.1 15.4 kD...	[more]

BLAST of CsaV3_1G010860 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G21870.1	5.6e-28	58.72	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	4.9e-16	39.64	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	1.1e-15	38.74	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	3.2e-15	38.38	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	4.1e-15	45.05	HSP20-like chaperones superfamily protein	[more]

BLAST of CsaV3_1G010860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O49710\|HS154_ARATH	1.0e-26	58.72	15.4 kDa class V heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP15.4 P...	[more]
sp\|Q7EZ57\|HS188_ORYSJ	5.7e-22	53.54	18.8 kDa class V heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
sp\|P27777\|HS16A_ORYSJ	8.0e-16	41.41	16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
sp\|Q943E6\|HS16B_ORYSJ	8.0e-16	41.41	16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
sp\|Q943E7\|HS16C_ORYSJ	3.0e-15	41.41	16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of CsaV3_1G010860 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LUT8\|A0A0A0LUT8_CUCSA	8.2e-66	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063560 PE=3 SV=1	[more]
tr\|A0A1S3B2U7\|A0A1S3B2U7_CUCME	2.5e-59	92.13	15.4 kDa class V heat shock protein OS=Cucumis melo OX=3656 GN=LOC103485389 PE=3...	[more]
tr\|H6TB34\|H6TB34_CITLA	1.4e-52	84.44	HSP15 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
tr\|A0A2N9F053\|A0A2N9F053_FAGSY	2.0e-35	63.77	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8370 PE=3 SV=1	[more]
tr\|A0A2I4DM24\|A0A2I4DM24_9ROSI	5.7e-35	66.13	15.4 kDa class V heat shock protein OS=Juglans regia OX=51240 GN=LOC108981472 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR031107	HSP20
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0006950	response to stress
biological_process	GO:0009408	response to heat
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G010860.1	CsaV3_1G010860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 15..114 e-value: 1.4E-22 score: 81.9
IPR008978	HSP20-like chaperone	SUPERFAMILY	SSF49764	HSP20-like chaperones	coord: 12..108
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 27..107 e-value: 3.8E-15 score: 55.8
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 16..120 score: 18.912
None	No IPR available	PANTHER	PTHR11527:SF97	15.4 KDA CLASS V HEAT SHOCK PROTEIN	coord: 18..115
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY	coord: 18..115

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G010860	CSPI01G10800	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G010860	Cucsa.085930	Cucumber (Gy14) v1	cgycucB089
CsaV3_1G010860	CmaCh13G007320	Cucurbita maxima (Rimu)	cmacucB0249
CsaV3_1G010860	CmoCh13G007610	Cucurbita moschata (Rifu)	cmocucB0235
CsaV3_1G010860	Cp4.1LG20g03690	Cucurbita pepo (Zucchini)	cpecucB0624
CsaV3_1G010860	CsGy1G010680	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G010860	Carg07541	Silver-seed gourd	carcucB1049
CsaV3_1G010860	Cla019390	Watermelon (97103) v1	cucwmB013
CsaV3_1G010860	MELO3C002465	Melon (DHL92) v3.5.1	cucmeB024
CsaV3_1G010860	ClCG03G004820	Watermelon (Charleston Gray)	cucwcgB038
CsaV3_1G010860	Lsi02G006090	Bottle gourd (USVL1VR-Ls)	cuclsiB022
CsaV3_1G010860	MELO3C002465.2	Melon (DHL92) v3.6.1	cucmedB022
CsaV3_1G010860	Bhi08G001519	Wax gourd	cucwgoB037

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G010860	Cucumber (Gy14) v2	cgybcucB247
CsaV3_1G010860	Cucumber (Gy14) v1	cgycucB018
CsaV3_1G010860	Cucurbita maxima (Rimu)	cmacucB0474
CsaV3_1G010860	Cucurbita maxima (Rimu)	cmacucB0775
CsaV3_1G010860	Cucurbita maxima (Rimu)	cmacucB1005
CsaV3_1G010860	Cucurbita moschata (Rifu)	cmocucB0457
CsaV3_1G010860	Cucurbita moschata (Rifu)	cmocucB0760
CsaV3_1G010860	Cucurbita moschata (Rifu)	cmocucB0989
CsaV3_1G010860	Cucurbita pepo (Zucchini)	cpecucB0031
CsaV3_1G010860	Cucurbita pepo (Zucchini)	cpecucB0059
CsaV3_1G010860	Cucurbita pepo (Zucchini)	cpecucB0586
CsaV3_1G010860	Wild cucumber (PI 183967)	cpicucB310
CsaV3_1G010860	Bottle gourd (USVL1VR-Ls)	cuclsiB020
CsaV3_1G010860	Melon (DHL92) v3.5.1	cucmeB092
CsaV3_1G010860	Melon (DHL92) v3.6.1	cucmedB085
CsaV3_1G010860	Watermelon (Charleston Gray)	cucwcgB015
CsaV3_1G010860	Watermelon (97103) v1	cucwmB050
CsaV3_1G010860	Watermelon (97103) v2	cucwmbB001
CsaV3_1G010860	Watermelon (97103) v2	cucwmbB030
CsaV3_1G010860	Wax gourd	cucwgoB026
CsaV3_1G010860	Cucumber (Chinese Long) v3	cuccucB044
CsaV3_1G010860	Silver-seed gourd	carcucB0529
CsaV3_1G010860	Silver-seed gourd	carcucB0672
CsaV3_1G010860	Silver-seed gourd	carcucB0969