CsaV3_1G010850 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G010850
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Polyadenylate-binding protein
Location	chr1 : 6732660 .. 6743551 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATTTGTAGAGAAAAAAAGAAAAACATTTTATTTTCTTTGTTCTAAGTGAATCCAAATGTGAAAGGTTTGGTGAGTTTTTGGGATAAGTAAAAACGTACCAAACAAATTATTTTTATTTTATTTCCTTTTTTAAAACGATAAATGTAATCGATTCCCCCACTGGCCCCCTTCTCTTTGTTTCCTCCCTTTTCGCCCATTATCGGCTTCTAGGGTTAGGGTTTCTCTCTTTGTCCAGACGAGACACTCAAAACTCTCTTCTTCTTTCTCCTTCTTTCCTCACTAAGGAGATTCTCTTATCCCTTTCTCCATTACCATGCAGCCTGCACCTGGTGTTGCCCCTCACAACATGCCTCACCAGGCCCCTCAGTACCAACAACAGCAACCTCCTTACATGATGATGCCCCCTCAGCCGCCCCAACCTCAGCCTGTTCCTCAGATGTGGCCTCAGCAGCCACAGGCCGGTTCCCCACAGGGCCAACCCCCTCAGTCTGCCAACGGGGATGAGGTTCGTACCCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATCTTTAATTGTTTTGCTCATACTGGCGAGGTACGTCTAAGAACGCCACCCACTTTAGATCTTGTGTGTGTGTGTCTTTATTATTTCTTTTTATCGTTGTTGTTGGGAAAAAAAAGATCTAGTTTTGTGATTATTAGGTTGATTGCATAAAGATTTGTCTACACACATGTTGGTATATATGAAGCGGTTCCGAAATTTCGTTTTTTTTTTTGCTGTTGAGATTTAACATTGTTTGTCTCTCCAGGTTTCCTCTGTGAAAGTGATTCGGAACAAGCAAACCGGCCAGTCCGAGGGTTACGGTTTTATTGAGTTTTTAACTCGTCCAGCTGCAGAAAGAGTACTTCAAACTTATAATGGCACCGCCATGCCCAATGGGGCTCAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGATTACACTATTTTTGTGGGAGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAAACATTTAGGGCACGCTATAACTCAGTTAAGGGCGCTAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAGGGTTATGGATTTGTTAAGTTTGGGGACGAGTCTGAACAAATGCGAGCAATGACTGAGATGAACGGTGTTCACTGTTCATCCAGACCCATGCGAATCGGACCAGCAGCTAACAAGAACACTTCTGGCGGTCAGCAGTTCTCGAAAAGTAAATACGAATTCCTCCCCAAACTGGAACATTTTAAATGAAAGACAGGGCATCAAATTTTGTATGGAATAGCTTGTCCATCATTCATTCATTGTATGGATGTGCCGTTTGTGTTTACTGATTTGTGTTTCTGGATGCATTTTGCTTTCTTATGGCCAGACACAATTCTTATTTTCTGTCCTGATTTAGCTCCTCTCCGTTACTTTTATTACTAGTTTCTAGCATTTTAATTCCCCTCTCGTATACCTTGGAAGAATAGTAGCCTTTCATGCCTTTCCATCGTGTACTTCCAATTCGAGCTTTGGTCATTTTAAGTACTATAAAGAAGAATTAATAAACTTATAAAACTCCTCTTTTCTTTAAGCAGGGTGTCAAAAGGCTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACATGCTTACCCTTTAGTACGTTGTTCCATTTAGGTCAGTTTTTTTCCCGCCAATGTCTTACCTCTTTTTTTTTATGTGGCATATTTATGCTACGGTTTTTAATTCACCTTTAGTTCTGCAACGTTTACCTTTTCCTATCATCTGCATGGGTATTTTTTTTGTCTCCCTGGTATTTCAGTCTTAATTCCGTTGGAAGTTTTTATTTTTTCTTTATTAAGTTTAGGGTACGCAGGTTCTTTAGCCAGTTTCATTATTGAAATTTCAGTATGTCTTGCGGCTATTGCTGGCCACTTAGGGTTGTGCTTGTCCTTCTCCTCCTGGCATTTAGGGTTATATGGTTTTACCTTCCTATTGTTTCATTTCAGTATTTGATGATTGGATCTCATTTATGTGTCCAACCCATTACCTGCAAAAGAATTTTGGTCAGCACAAAGTCATGTTTCTTAGTGTTATTAGGGTTCTTAGGAGTCTTATTTCTTACTAGTTTTTTGTTGTGTATCTTGGTATTCATTTTGTCATTCCTTTAGAATATTTCGTTCATCTTCTAAAGTTTTGAATTGGACATAGATATGTTCGGGTATACTTTCTTTGTTCTTTTAAGTAGGATCCTATTAATTGTTTTATTCTGTTCCGTTGTGTGAATCACTTTTATGTGAATGGTTGTGCAAGTTAGGTGCGGTGGATTCTGAGAATGGCATAATATGGTTGTTTGAGTCTGAAGTTAGGTACTCTAGTTGTGATATCTAGTTTTTTATGATGAAAAGCTTTATTATGTCAATTTCTTTTTTAATAATGTGTTTCTCTATGTTTTTCAAATTTACATTCTATGTTGAAATGAGCATGTTTATTTTCTTTTTTTATATTTTGGCCGTATGGTGATCATCATTAGATAATTATGATTGTGCCTTTATGGATTGTCAAAACTTCTATTTGAAATATTGTCTAGTTTTATATTTCTTAGGGCACACGTTGAAATTGGTACTTGTCTTCTAGTTATGCTATTTTGTAACAAATATCGCTCTAATGTATATTTTTCAAATTTCCCAATTTTGTTTGTGAAAATGGACTTCCTATGTACGTAATTTTCTGGATATCTTTTGTAGTTCTTGTTATTTTGGTATTCTTCGTGATTTCTCAATATGAGTACTTCTATGTTGCCCGTTATACCTACTGCCTCTGGTTTTTCCCCCTATAATGAAGCCGACTTTAGGTTGCATCGAACCATTTAAAACAGTGTGACTCTGTAATTCAAAATTTGCTTGTGTTTCAATTTTGTTGTTGGAGTCTTTTTTGAACATGCAACATATGGCATTGAGCCTAGTTCAACAGCCCTCTAAGCCAACCAGCTATGGAATTATTTGGTTGGAGGTTTGATTTGTTATAAGTGGAGCACACAGTGTTTATGCAGGTCTTGTGGATTCTATTTTTTATTTCTCAGTACACATTGCTTATTGCATTGATGTATATTATTTATGCAAGCTTGGACTGTAGCAGAATAATTGATATTGTGTGTTTAACAACTGCTGAACTGGTTGGTTCAAGTTAAAGAGCAAGTTCATTTAGGTTTGATTTTTTACTATTGCAGCTTCATATCAGAATCCTCAAGGGGCTCAGAATGAGAATGATCCAAACAATACGACTGTGGGTTCTTTACCTTATTTTTCCTTCGTCATGTAATTTTATTTGAGTTTTCTAACTTCTGAAATCCTATTGCAGATATTTGTGGGCAATTTGGATGCTAACGTGACAGACGAACACTTGCGACAAGTATTTGGTCAATATGGGGAATTGGTGCATGTAAAGATACCTGTAGGCAAACGATGTGGTTTCGTTCAATTTGCTGACAGGTTTGTATTTTGTTTCTTTTAAAAATATGAAACAGCTTGGTAGTTCTAACAAATGTAACCTAACATCTTAATCTCTCCTGAATTGGCTTGGACACATTTGATGGTTATTTCAATTTTGTTATTAGGAACTGTGCTGAGGAAGCGCTACGTGTGTTGAATGGAACACAAATTGGTGGACAGAACATTAGACTCTCATGGGGACGTAGTCCTTCAAATAAACAGGTTGTGGTATTGTACTCTTTGTGTCCGTTGATGGTTATTGATTATAGTTCTTTCCGAATGTTCATTATTTTCTCATCTTTTTAGCCACAGGCGGACCCTAACCAATGGAATGGAGGTGGCTATTACGGATATGGACAAGGATACGAAAACTATAGCTATGCCCCAGCTCCTCAGGACCCTAATATGTTCTACAGTGGCTATGGTGGGTATGGAAATTACCAGCAGCCTCCCCCACAACAACCGCAGCAGCAGCAGCAAGGAGGATACATGTAGATTTGAAGTTTTGTTTACTCTGCCGTGGCCGCTCCCCTACCGAATCTCCCGGGGATATGATGGTTAAAGATTTTGGCAAAGTTATTTCACCCTCCCATTACATCCATTCTGAAGAACTCATCCTTTTCCTATTTTCTGTTCTACCTAAACTCTTTGATGACATGAGACATCTTTTCTTTTTTATTTATTATTATGTTATCCCGCAGAAGTTTTATTACGACTCTGTGTCGTTTATTTTCTATCACTACATTTTTGGTCTTTTGATGAGAGAGAATCTGGAGGCTTTTTGCCTTTGCTTATGAGTATTGCATTTTATACTGATTTAAACACTGACAAGTAATTCATCCCTAGCAAATTTATGGCCGCTGTGGGGTTGTGTTTTGTTTTTGTTTTTTCCGTTTCTGTTTTCTTCAGTACTTGTGAAAATTGTGCTACAACTATATTGTCCTATTTTATTGAATTGTATGGCTGTGGTATGAACACTTTTCCATGTGGGTCTTGACTTAGGATTACTACTTTTCAACCTTATTTAGTTTGTAAGATTTTGTTGCGGTT

mRNA sequence

ATGCAGCCTGCACCTGGTGTTGCCCCTCACAACATGCCTCACCAGGCCCCTCAGTACCAACAACAGCAACCTCCTTACATGATGATGCCCCCTCAGCCGCCCCAACCTCAGCCTGTTCCTCAGATGTGGCCTCAGCAGCCACAGGCCGGTTCCCCACAGGGCCAACCCCCTCAGTCTGCCAACGGGGATGAGGTTCGTACCCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATCTTTAATTGTTTTGCTCATACTGGCGAGGTTTCCTCTGTGAAAGTGATTCGGAACAAGCAAACCGGCCAGTCCGAGGGTTACGGTTTTATTGAGTTTTTAACTCGTCCAGCTGCAGAAAGAGTACTTCAAACTTATAATGGCACCGCCATGCCCAATGGGGCTCAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGATTACACTATTTTTGTGGGAGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAAACATTTAGGGCACGCTATAACTCAGTTAAGGGCGCTAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAGGGTTATGGATTTGTTAAGTTTGGGGACGAGTCTGAACAAATGCGAGCAATGACTGAGATGAACGGTGTTCACTGTTCATCCAGACCCATGCGAATCGGACCAGCAGCTAACAAGAACACTTCTGGCGGTCAGCAGTTCTCGAAAACTTCATATCAGAATCCTCAAGGGGCTCAGAATGAGAATGATCCAAACAATACGACTATATTTGTGGGCAATTTGGATGCTAACGTGACAGACGAACACTTGCGACAAGTATTTGGTCAATATGGGGAATTGGTGCATGTAAAGATACCTGTAGGCAAACGATGTGGTTTCGTTCAATTTGCTGACAGGAACTGTGCTGAGGAAGCGCTACGTGTGTTGAATGGAACACAAATTGGTGGACAGAACATTAGACTCTCATGGGGACGTAGTCCTTCAAATAAACAGGCGGACCCTAACCAATGGAATGGAGGTGGCTATTACGGATATGGACAAGGATACGAAAACTATAGCTATGCCCCAGCTCCTCAGGACCCTAATATGTTCTACAGTGGCTATGGTGGGTATGGAAATTACCAGCAGCCTCCCCCACAACAACCGCAGCAGCAGCAGCAAGGAGGATACATGTAG

Coding sequence (CDS)

ATGCAGCCTGCACCTGGTGTTGCCCCTCACAACATGCCTCACCAGGCCCCTCAGTACCAACAACAGCAACCTCCTTACATGATGATGCCCCCTCAGCCGCCCCAACCTCAGCCTGTTCCTCAGATGTGGCCTCAGCAGCCACAGGCCGGTTCCCCACAGGGCCAACCCCCTCAGTCTGCCAACGGGGATGAGGTTCGTACCCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATCTTTAATTGTTTTGCTCATACTGGCGAGGTTTCCTCTGTGAAAGTGATTCGGAACAAGCAAACCGGCCAGTCCGAGGGTTACGGTTTTATTGAGTTTTTAACTCGTCCAGCTGCAGAAAGAGTACTTCAAACTTATAATGGCACCGCCATGCCCAATGGGGCTCAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGATTACACTATTTTTGTGGGAGATTTGGCTGGTGATGTTACTGATTATGTGCTACAAGAAACATTTAGGGCACGCTATAACTCAGTTAAGGGCGCTAAAGTTGTGATTGATAGGCTCACTGGACGCACTAAGGGTTATGGATTTGTTAAGTTTGGGGACGAGTCTGAACAAATGCGAGCAATGACTGAGATGAACGGTGTTCACTGTTCATCCAGACCCATGCGAATCGGACCAGCAGCTAACAAGAACACTTCTGGCGGTCAGCAGTTCTCGAAAACTTCATATCAGAATCCTCAAGGGGCTCAGAATGAGAATGATCCAAACAATACGACTATATTTGTGGGCAATTTGGATGCTAACGTGACAGACGAACACTTGCGACAAGTATTTGGTCAATATGGGGAATTGGTGCATGTAAAGATACCTGTAGGCAAACGATGTGGTTTCGTTCAATTTGCTGACAGGAACTGTGCTGAGGAAGCGCTACGTGTGTTGAATGGAACACAAATTGGTGGACAGAACATTAGACTCTCATGGGGACGTAGTCCTTCAAATAAACAGGCGGACCCTAACCAATGGAATGGAGGTGGCTATTACGGATATGGACAAGGATACGAAAACTATAGCTATGCCCCAGCTCCTCAGGACCCTAATATGTTCTACAGTGGCTATGGTGGGTATGGAAATTACCAGCAGCCTCCCCCACAACAACCGCAGCAGCAGCAGCAAGGAGGATACATGTAG

Protein sequence

MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAGSPQGQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQADPNQWNGGGYYGYGQGYENYSYAPAPQDPNMFYSGYGGYGNYQQPPPQQPQQQQQGGYM

Homology

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BLAST of CsaV3_1G010850 vs. NCBI nr
Match: XP_011652720.1 (PREDICTED: polyadenylate-binding protein RBP45 isoform X4 [Cucumis sativus])

HSP 1 Score: 710.7 bits (1833), Expect = 2.9e-201
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60

Query: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300
           GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK
Sbjct: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300

Query: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQADPNQWNGGGYYGYGQGY 360
           RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQADPNQWNGGGYYGYGQGY
Sbjct: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQADPNQWNGGGYYGYGQGY 360

Query: 361 ENYSYAPAPQDPNMFYSG 379
           ENYSYAPAPQDPNMFYSG
Sbjct: 361 ENYSYAPAPQDPNMFYSG 378

[Close]

BLAST of CsaV3_1G010850 vs. NCBI nr
Match: XP_011652716.1 (PREDICTED: polyadenylate-binding protein RBP45 isoform X3 [Cucumis sativus])

HSP 1 Score: 706.1 bits (1821), Expect = 7.0e-200
Identity = 378/379 (99.74%), Postives = 378/379 (99.74%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60

Query: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300
           GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK
Sbjct: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300

Query: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQ-ADPNQWNGGGYYGYGQG 360
           RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQ ADPNQWNGGGYYGYGQG
Sbjct: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQVADPNQWNGGGYYGYGQG 360

Query: 361 YENYSYAPAPQDPNMFYSG 379
           YENYSYAPAPQDPNMFYSG
Sbjct: 361 YENYSYAPAPQDPNMFYSG 379

[Close]

BLAST of CsaV3_1G010850 vs. NCBI nr
Match: XP_004145109.1 (PREDICTED: polyadenylate-binding protein RBP45 isoform X2 [Cucumis sativus])

HSP 1 Score: 705.7 bits (1820), Expect = 9.2e-200
Identity = 378/380 (99.47%), Postives = 378/380 (99.47%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60

Query: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300
           GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK
Sbjct: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300

Query: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNK--QADPNQWNGGGYYGYGQ 360
           RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNK  QADPNQWNGGGYYGYGQ
Sbjct: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYGYGQ 360

Query: 361 GYENYSYAPAPQDPNMFYSG 379
           GYENYSYAPAPQDPNMFYSG
Sbjct: 361 GYENYSYAPAPQDPNMFYSG 380

[Close]

BLAST of CsaV3_1G010850 vs. NCBI nr
Match: XP_011652705.1 (PREDICTED: polyadenylate-binding protein RBP45 isoform X1 [Cucumis sativus])

HSP 1 Score: 705.3 bits (1819), Expect = 1.2e-199
Identity = 378/381 (99.21%), Postives = 378/381 (99.21%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60

Query: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300
           GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK
Sbjct: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300

Query: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNK---QADPNQWNGGGYYGYG 360
           RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNK   QADPNQWNGGGYYGYG
Sbjct: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQVPQADPNQWNGGGYYGYG 360

Query: 361 QGYENYSYAPAPQDPNMFYSG 379
           QGYENYSYAPAPQDPNMFYSG
Sbjct: 361 QGYENYSYAPAPQDPNMFYSG 381

[Close]

BLAST of CsaV3_1G010850 vs. NCBI nr
Match: XP_008441150.1 (PREDICTED: polyadenylate-binding protein RBP45-like isoform X4 [Cucumis melo])

HSP 1 Score: 686.8 bits (1771), Expect = 4.4e-194
Identity = 367/378 (97.09%), Postives = 369/378 (97.62%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 60

Query: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300
           G QQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTD+HLRQVFGQYGELVHVKIPVGK
Sbjct: 241 GSQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDDHLRQVFGQYGELVHVKIPVGK 300

Query: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQADPNQWNGGGYYGYGQGY 360
           RCGFVQF+DRNCAEEALR LNGTQIGGQNIRLSWGRSPSNKQADPNQWNGGGYYGYGQGY
Sbjct: 301 RCGFVQFSDRNCAEEALRALNGTQIGGQNIRLSWGRSPSNKQADPNQWNGGGYYGYGQGY 360

Query: 361 ENYSYAPAPQDPNMFYSG 379
           ENYSYAPAPQDPNMFYSG
Sbjct: 361 ENYSYAPAPQDPNMFYSG 378

[Close]

BLAST of CsaV3_1G010850 vs. TAIR10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 449.9 bits (1156), Expect = 1.7e-126
Identity = 227/324 (70.06%), Postives = 263/324 (81.17%), Query Frame = 0


Query: 58  QSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTR 117
           Q    DE+RTLWIGDLQYWMDEN+++ CFAHTGE+ S KVIRNKQTGQ EGYGFIEF + 
Sbjct: 54  QPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASH 113

Query: 118 PAAERVLQTYNGTAMPN-GAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQ 177
            AAERVLQT+N   +P+   Q FRLNWA  S+G+KR DDSPDYTIFVGDLA DVTDY+L 
Sbjct: 114 AAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILL 173

Query: 178 ETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPA 237
           ETFRA Y SVKGAKVVIDR+TGRTKGYGFV+F DESEQ+RAMTEMNGV CS+RPMRIGPA
Sbjct: 174 ETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPA 233

Query: 238 ANKNTSGGQQFSKTSYQ-NPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVH 297
           A+K    GQ   + SYQ +  G   +NDPNNTT+FVG LDA+VTD+HL+ VF QYGE+VH
Sbjct: 234 ASKKGVTGQ---RDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVH 293

Query: 298 VKIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQA-DPNQWNGGG 357
           VKIP GKRCGFVQF++++CAEEALR+LNG Q+GG  +RLSWGRSPSNKQ+ DP+Q+    
Sbjct: 294 VKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQSGDPSQFY--- 353

Query: 358 YYGYGQGYENYSYAPAPQDPNMFY 377
           Y GYGQG E Y Y   PQDPN +Y
Sbjct: 354 YGGYGQGQEQYGYT-MPQDPNAYY 369

[Close]

BLAST of CsaV3_1G010850 vs. TAIR10
Match: AT5G54900.1 (RNA-binding protein 45A)

HSP 1 Score: 437.2 bits (1123), Expect = 1.1e-122
Identity = 224/331 (67.67%), Postives = 260/331 (78.55%), Query Frame = 0


Query: 55  QPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEF 114
           Q P SA+  +V++LWIGDLQ WMDENYI + FA +GE +S KVIRNK TGQSEGYGFIEF
Sbjct: 51  QNPGSAS--DVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEF 110

Query: 115 LTRPAAERVLQTYNGTAMPNGAQNFRLNW--ASAGEKR-QDDSPDYTIFVGDLAGDVTDY 174
           ++   AERVLQTYNG  MP+  Q FRLNW  A AGEKR Q + PD+TIFVGDLA +VTDY
Sbjct: 111 VSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDY 170

Query: 175 VLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRI 234
           +L +TF+  Y SVKGAKVV+DR TGR+KGYGFV+F DE+EQMRAMTEMNG +CS+RPMRI
Sbjct: 171 MLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRI 230

Query: 235 GPAANKNTSGGQQFSKTSYQNPQGAQ-NENDPNNTTIFVGNLDANVTDEHLRQVFGQYGE 294
           GPAANKN    Q      YQN QGA   +NDPNNTTIFVG LDANVTD+ L+ +FGQ+GE
Sbjct: 231 GPAANKNALPMQ---PAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGE 290

Query: 295 LVHVKIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQADPNQWNG 354
           L+HVKIP GKRCGFVQ+A++  AE AL VLNGTQ+GGQ+IRLSWGRSP NKQ+D  QWNG
Sbjct: 291 LLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQSDQAQWNG 350

Query: 355 GGYYGY---GQGYENYSYAPAPQDPNMFYSG 379
           GGYYGY    QG   Y+  P  QDPN +Y G
Sbjct: 351 GGYYGYPPQPQGGYGYAAQPPTQDPNAYYGG 375

[Close]

BLAST of CsaV3_1G010850 vs. TAIR10
Match: AT4G27000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 422.9 bits (1086), Expect = 2.2e-118
Identity = 212/310 (68.39%), Postives = 245/310 (79.03%), Query Frame = 0


Query: 64  EVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 123
           E+R+LWIGDLQ WMDENY+ N F  TGE ++ KVIRNKQ G SEGYGFIEF+    AER 
Sbjct: 78  EIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERN 137

Query: 124 LQTYNGTAMPNGAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARY 183
           LQTYNG  MP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA DVTD++L ETF+A Y
Sbjct: 138 LQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVY 197

Query: 184 NSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSG 243
           +SVKGAKVV DR TGR+KGYGFV+F DESEQ+RAMTEMNG +CSSRPMR GPAANK    
Sbjct: 198 SSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLT 257

Query: 244 GQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKR 303
            Q     SYQN QG   E+DP NTTIFVG +D +VT++ L+ VFGQ+GELVHVKIP GKR
Sbjct: 258 MQ---PASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKR 317

Query: 304 CGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQADPNQ---WNGGGYYGY-G 363
           CGFVQ+A+R CAE+AL VLNGTQ+GGQ+IRLSWGRSPSNKQ  P+Q     GGGYYGY  
Sbjct: 318 CGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPP 377

Query: 364 QGYENYSYAP 368
           QGYE Y YAP
Sbjct: 378 QGYEAYGYAP 384

[Close]

BLAST of CsaV3_1G010850 vs. TAIR10
Match: AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 365.9 bits (938), Expect = 3.1e-101
Identity = 196/347 (56.48%), Postives = 238/347 (68.59%), Query Frame = 0


Query: 55  QPPQSA-----NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGY 114
           QPPQ +       +EVRTLWIGDLQYW+DENY+ +CF+ TGE+ SVKVIRNK TGQ EGY
Sbjct: 8   QPPQGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGY 67

Query: 115 GFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGE-KRQDDSPDYTIFVGDLAGDV 174
           GFIEF++  AAER LQTYNGT MP     FRLNWAS G  ++ D  PD++IFVGDLA DV
Sbjct: 68  GFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDV 127

Query: 175 TDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRP 234
           TDY+LQETFR  Y+SV+GAKVV D  TGR+KGYGFVKF +ESE+ RAM EMNG++CS+RP
Sbjct: 128 TDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRP 187

Query: 235 MRIGPAANKNTSGGQQFSKTSYQNP-------------QGAQNENDPNNTTIFVGNLDAN 294
           MRI  A  K   G QQ   T    P               A  E+D   TTI V NLD N
Sbjct: 188 MRISAATPKKNVGVQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQN 247

Query: 295 VTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWG 354
           VT+E L++ F Q GE+++VKIP  K  G+VQF  R  AEEA++ + G  IG Q +R+SW 
Sbjct: 248 VTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWS 307

Query: 355 RSPSN----KQADPNQWNGGGYYGYGQGYENYSYAPAPQDPNMFYSG 379
           ++P       QADPNQWN  GYYGYGQGY+ Y+Y  A QDP+++  G
Sbjct: 308 KNPGQDGWVTQADPNQWN--GYYGYGQGYDAYAYG-ATQDPSVYAYG 351

[Close]

BLAST of CsaV3_1G010850 vs. TAIR10
Match: AT1G49600.1 (RNA-binding protein 47A)

HSP 1 Score: 365.5 bits (937), Expect = 4.1e-101
Identity = 193/322 (59.94%), Postives = 229/322 (71.12%), Query Frame = 0


Query: 65  VRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVL 124
           V+TLW+GDL +WMDE Y+  CF+HT EVSSVKVIRNKQT QSEGYGF+EFL+R AAE  L
Sbjct: 118 VKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEAL 177

Query: 125 QTYNGTAMPNGAQNFRLNWA--SAGEKR-QDDSPDYTIFVGDLAGDVTDYVLQETFRARY 184
           Q+++G  MPN  Q FRLNWA  S GEKR  ++ PD +IFVGDLA DV+D VL ETF  RY
Sbjct: 178 QSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRY 237

Query: 185 NSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNT-- 244
            SVKGAKVVID  TGR+KGYGFV+FGDE+E+ RAMTEMNG  CSSR MR+G A  K    
Sbjct: 238 PSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAA 297

Query: 245 ----SGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVK 304
               +G Q  +        G+ ++ + NN+TIFVG LDA+VT+E L Q F  +GE+V VK
Sbjct: 298 YGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVK 357

Query: 305 IPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSN--KQADPNQWNGGGY 364
           IPVGK CGFVQFA+R  AEEA+  LNGT IG   +RLSWGRSP+   +    NQWNGG  
Sbjct: 358 IPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQWNGG-- 417

Query: 365 YGYGQGYENYSYAPAPQDPNMF 376
           Y  GQGY N     A QD NM+
Sbjct: 418 YSRGQGYNN---GYANQDSNMY 434

[Close]

BLAST of CsaV3_1G010850 vs. Swiss-Prot
Match: sp|Q9LEB4|RBP45_NICPL (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 6.0e-134
Identity = 233/324 (71.91%), Postives = 264/324 (81.48%), Query Frame = 0


Query: 56  PPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFL 115
           P  + N +EVR+LWIGDLQYWMDENY+  CF HTGE+ S KVIRNKQTGQSEGYGF+EF 
Sbjct: 74  PSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFLEFR 133

Query: 116 TRPAAERVLQTYNGTAMPNGAQNFRLNWASAGE-KRQDDSPDYTIFVGDLAGDVTDYVLQ 175
           +  AAE +LQTYNGT MPN  QNFR+NWAS G  +R+DDS ++TIFVGDLA DVTDY+LQ
Sbjct: 134 SHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSAEHTIFVGDLAADVTDYILQ 193

Query: 176 ETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPA 235
           ETF++ Y+SV+GAKVV DR+TGR+KGYGFVKF DESEQ+RAMTEMNGV CS+RPMRIGPA
Sbjct: 194 ETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRIGPA 253

Query: 236 ANKNTSGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHV 295
           ANK   G  Q  K +YQNPQ  Q E+DPNNTTIFVG LD  V +EHLRQVF  YGELVHV
Sbjct: 254 ANKKPVGTPQ--KATYQNPQATQGESDPNNTTIFVGGLDPTVAEEHLRQVFSPYGELVHV 313

Query: 296 KIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQADPNQW--NGGG 355
           KI  GKRCGFVQF  R  AE+AL  LNGTQ+GGQ+IRLSWGRSPS+KQ D  QW  +GG 
Sbjct: 314 KIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSPSSKQTDQTQWGGSGGA 373

Query: 356 YYGYGQGYENYSYAPAPQDPNMFY 377
           YYGYGQGYE Y YAP  QDPNM+Y
Sbjct: 374 YYGYGQGYEAYGYAPPAQDPNMYY 395

[Close]

BLAST of CsaV3_1G010850 vs. Swiss-Prot
Match: sp|Q9SAB3|RB45B_ARATH (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 3.0e-125
Identity = 227/324 (70.06%), Postives = 263/324 (81.17%), Query Frame = 0


Query: 58  QSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTR 117
           Q    DE+RTLWIGDLQYWMDEN+++ CFAHTGE+ S KVIRNKQTGQ EGYGFIEF + 
Sbjct: 54  QPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASH 113

Query: 118 PAAERVLQTYNGTAMPN-GAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQ 177
            AAERVLQT+N   +P+   Q FRLNWA  S+G+KR DDSPDYTIFVGDLA DVTDY+L 
Sbjct: 114 AAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILL 173

Query: 178 ETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPA 237
           ETFRA Y SVKGAKVVIDR+TGRTKGYGFV+F DESEQ+RAMTEMNGV CS+RPMRIGPA
Sbjct: 174 ETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPA 233

Query: 238 ANKNTSGGQQFSKTSYQ-NPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVH 297
           A+K    GQ   + SYQ +  G   +NDPNNTT+FVG LDA+VTD+HL+ VF QYGE+VH
Sbjct: 234 ASKKGVTGQ---RDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVH 293

Query: 298 VKIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQA-DPNQWNGGG 357
           VKIP GKRCGFVQF++++CAEEALR+LNG Q+GG  +RLSWGRSPSNKQ+ DP+Q+    
Sbjct: 294 VKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQSGDPSQFY--- 353

Query: 358 YYGYGQGYENYSYAPAPQDPNMFY 377
           Y GYGQG E Y Y   PQDPN +Y
Sbjct: 354 YGGYGQGQEQYGYT-MPQDPNAYY 369

[Close]

BLAST of CsaV3_1G010850 vs. Swiss-Prot
Match: sp|Q9FPJ8|RB45A_ARATH (Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A PE=2 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 2.0e-121
Identity = 224/331 (67.67%), Postives = 260/331 (78.55%), Query Frame = 0


Query: 55  QPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEF 114
           Q P SA+  +V++LWIGDLQ WMDENYI + FA +GE +S KVIRNK TGQSEGYGFIEF
Sbjct: 51  QNPGSAS--DVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEF 110

Query: 115 LTRPAAERVLQTYNGTAMPNGAQNFRLNW--ASAGEKR-QDDSPDYTIFVGDLAGDVTDY 174
           ++   AERVLQTYNG  MP+  Q FRLNW  A AGEKR Q + PD+TIFVGDLA +VTDY
Sbjct: 111 VSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDY 170

Query: 175 VLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRI 234
           +L +TF+  Y SVKGAKVV+DR TGR+KGYGFV+F DE+EQMRAMTEMNG +CS+RPMRI
Sbjct: 171 MLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRI 230

Query: 235 GPAANKNTSGGQQFSKTSYQNPQGAQ-NENDPNNTTIFVGNLDANVTDEHLRQVFGQYGE 294
           GPAANKN    Q      YQN QGA   +NDPNNTTIFVG LDANVTD+ L+ +FGQ+GE
Sbjct: 231 GPAANKNALPMQ---PAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGE 290

Query: 295 LVHVKIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQADPNQWNG 354
           L+HVKIP GKRCGFVQ+A++  AE AL VLNGTQ+GGQ+IRLSWGRSP NKQ+D  QWNG
Sbjct: 291 LLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQSDQAQWNG 350

Query: 355 GGYYGY---GQGYENYSYAPAPQDPNMFYSG 379
           GGYYGY    QG   Y+  P  QDPN +Y G
Sbjct: 351 GGYYGYPPQPQGGYGYAAQPPTQDPNAYYGG 375

[Close]

BLAST of CsaV3_1G010850 vs. Swiss-Prot
Match: sp|Q93W34|RP45C_ARATH (Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C PE=2 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 3.9e-117
Identity = 212/310 (68.39%), Postives = 245/310 (79.03%), Query Frame = 0


Query: 64  EVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERV 123
           E+R+LWIGDLQ WMDENY+ N F  TGE ++ KVIRNKQ G SEGYGFIEF+    AER 
Sbjct: 78  EIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERN 137

Query: 124 LQTYNGTAMPNGAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARY 183
           LQTYNG  MP+  Q FRLNWA   AGE+RQ + P++T+FVGDLA DVTD++L ETF+A Y
Sbjct: 138 LQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVY 197

Query: 184 NSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSG 243
           +SVKGAKVV DR TGR+KGYGFV+F DESEQ+RAMTEMNG +CSSRPMR GPAANK    
Sbjct: 198 SSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLT 257

Query: 244 GQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKR 303
            Q     SYQN QG   E+DP NTTIFVG +D +VT++ L+ VFGQ+GELVHVKIP GKR
Sbjct: 258 MQ---PASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKR 317

Query: 304 CGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQADPNQ---WNGGGYYGY-G 363
           CGFVQ+A+R CAE+AL VLNGTQ+GGQ+IRLSWGRSPSNKQ  P+Q     GGGYYGY  
Sbjct: 318 CGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPP 377

Query: 364 QGYENYSYAP 368
           QGYE Y YAP
Sbjct: 378 QGYEAYGYAP 384

[Close]

BLAST of CsaV3_1G010850 vs. Swiss-Prot
Match: sp|Q9LEB3|RBP47_NICPL (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.6e-102
Identity = 194/332 (58.43%), Postives = 241/332 (72.59%), Query Frame = 0


Query: 63  DEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAER 122
           ++ +T+WIGDLQ WMDE+Y+ +CF+  GEV SVK+IRNKQTGQSE YGF+EF T  AAE+
Sbjct: 81  EDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEK 140

Query: 123 VLQTYNGTAMPNGAQNFRLNWA--SAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 182
           VLQ+YNGT MPN  Q FRLNWA  S GEKR +   D++IFVGDLA DVTD +L++TF +R
Sbjct: 141 VLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASR 200

Query: 183 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 242
           Y S+KGAKVV+D  TG +KGYGFV+FGDESE+ RAMTEMNGV+CSSR MRIG A  K  S
Sbjct: 201 YPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPS 260

Query: 243 GGQQFSK----------TSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGE 302
             +Q+S           ++     G+Q++ D +NTTIFVG LD+ VTDE LRQ F Q+GE
Sbjct: 261 AHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGE 320

Query: 303 LVHVKIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQA---DPNQ 362
           +V VKIP GK CGFVQF+DR+ A+EA++ L+G  IG Q +RLSWGRSP+NKQ      +Q
Sbjct: 321 VVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQ 380

Query: 363 WNGGGYYGYGQGYENYSY-APAPQDPNMFYSG 379
           WNGG  Y   Q Y  Y Y A   QD  M+ +G
Sbjct: 381 WNGG--YNGRQNYGGYGYGASQNQDSGMYATG 410

[Close]

BLAST of CsaV3_1G010850 vs. TrEMBL
Match: tr|A0A1S3B3E5|A0A1S3B3E5_CUCME (polyadenylate-binding protein RBP45-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485366 PE=4 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 2.9e-194
Identity = 367/378 (97.09%), Postives = 369/378 (97.62%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 60

Query: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300
           G QQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTD+HLRQVFGQYGELVHVKIPVGK
Sbjct: 241 GSQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDDHLRQVFGQYGELVHVKIPVGK 300

Query: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQADPNQWNGGGYYGYGQGY 360
           RCGFVQF+DRNCAEEALR LNGTQIGGQNIRLSWGRSPSNKQADPNQWNGGGYYGYGQGY
Sbjct: 301 RCGFVQFSDRNCAEEALRALNGTQIGGQNIRLSWGRSPSNKQADPNQWNGGGYYGYGQGY 360

Query: 361 ENYSYAPAPQDPNMFYSG 379
           ENYSYAPAPQDPNMFYSG
Sbjct: 361 ENYSYAPAPQDPNMFYSG 378

[Close]

BLAST of CsaV3_1G010850 vs. TrEMBL
Match: tr|A0A1S3B2A3|A0A1S3B2A3_CUCME (polyadenylate-binding protein RBP45-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485366 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 7.2e-193
Identity = 367/379 (96.83%), Postives = 369/379 (97.36%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 60

Query: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300
           G QQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTD+HLRQVFGQYGELVHVKIPVGK
Sbjct: 241 GSQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDDHLRQVFGQYGELVHVKIPVGK 300

Query: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQ-ADPNQWNGGGYYGYGQG 360
           RCGFVQF+DRNCAEEALR LNGTQIGGQNIRLSWGRSPSNKQ ADPNQWNGGGYYGYGQG
Sbjct: 301 RCGFVQFSDRNCAEEALRALNGTQIGGQNIRLSWGRSPSNKQVADPNQWNGGGYYGYGQG 360

Query: 361 YENYSYAPAPQDPNMFYSG 379
           YENYSYAPAPQDPNMFYSG
Sbjct: 361 YENYSYAPAPQDPNMFYSG 379

[Close]

BLAST of CsaV3_1G010850 vs. TrEMBL
Match: tr|A0A1S3B2Q3|A0A1S3B2Q3_CUCME (polyadenylate-binding protein RBP45-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485366 PE=4 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 9.4e-193
Identity = 367/380 (96.58%), Postives = 369/380 (97.11%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 60

Query: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300
           G QQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTD+HLRQVFGQYGELVHVKIPVGK
Sbjct: 241 GSQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDDHLRQVFGQYGELVHVKIPVGK 300

Query: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNK--QADPNQWNGGGYYGYGQ 360
           RCGFVQF+DRNCAEEALR LNGTQIGGQNIRLSWGRSPSNK  QADPNQWNGGGYYGYGQ
Sbjct: 301 RCGFVQFSDRNCAEEALRALNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYGYGQ 360

Query: 361 GYENYSYAPAPQDPNMFYSG 379
           GYENYSYAPAPQDPNMFYSG
Sbjct: 361 GYENYSYAPAPQDPNMFYSG 380

[Close]

BLAST of CsaV3_1G010850 vs. TrEMBL
Match: tr|A0A1S3B2R4|A0A1S3B2R4_CUCME (polyadenylate-binding protein RBP45-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485366 PE=4 SV=1)

HSP 1 Score: 681.4 bits (1757), Expect = 1.2e-192
Identity = 367/381 (96.33%), Postives = 369/381 (96.85%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 60

Query: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300
           G QQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTD+HLRQVFGQYGELVHVKIPVGK
Sbjct: 241 GSQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDDHLRQVFGQYGELVHVKIPVGK 300

Query: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNK---QADPNQWNGGGYYGYG 360
           RCGFVQF+DRNCAEEALR LNGTQIGGQNIRLSWGRSPSNK   QADPNQWNGGGYYGYG
Sbjct: 301 RCGFVQFSDRNCAEEALRALNGTQIGGQNIRLSWGRSPSNKQVPQADPNQWNGGGYYGYG 360

Query: 361 QGYENYSYAPAPQDPNMFYSG 379
           QGYENYSYAPAPQDPNMFYSG
Sbjct: 361 QGYENYSYAPAPQDPNMFYSG 381

[Close]

BLAST of CsaV3_1G010850 vs. TrEMBL
Match: tr|A0A1S3B3F4|A0A1S3B3F4_CUCME (polyadenylate-binding protein RBP45-like OS=Cucumis melo OX=3656 GN=LOC103485380 PE=4 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 1.3e-173
Identity = 344/384 (89.58%), Postives = 349/384 (90.89%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQPPQSA 60
           MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       A
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 60

Query: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  NGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180
           ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR
Sbjct: 121 ERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTS 240
           YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQ+RAMTEMNGVHCSSRPMRIGPAANKNTS
Sbjct: 181 YNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTS 240

Query: 241 GGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGK 300
           G QQFSKTSYQNP G QNENDPNNTTIFVGNLD+NVTDEHLRQVF QYGELVHVKIP GK
Sbjct: 241 GSQQFSKTSYQNPPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNK--QADPNQWN----GGGYY 360
           RCGFVQF+DR+CAEEALR+LNGTQIGGQNIRLSWGRSPSNK  QADPNQWN         
Sbjct: 301 RCGFVQFSDRSCAEEALRMLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNXXXXXXXXX 360

Query: 361 GYGQGYENYSYAPAPQDPNMFYSG 379
                      APA QDPNMFYSG
Sbjct: 361 XXXXXXXXXXXAPAAQDPNMFYSG 384

The following BLAST results are available for this feature:

BLAST of CsaV3_1G010850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652720.1	2.9e-201	100.00	PREDICTED: polyadenylate-binding protein RBP45 isoform X4 [Cucumis sativus]	[more]
XP_011652716.1	7.0e-200	99.74	PREDICTED: polyadenylate-binding protein RBP45 isoform X3 [Cucumis sativus]	[more]
XP_004145109.1	9.2e-200	99.47	PREDICTED: polyadenylate-binding protein RBP45 isoform X2 [Cucumis sativus]	[more]
XP_011652705.1	1.2e-199	99.21	PREDICTED: polyadenylate-binding protein RBP45 isoform X1 [Cucumis sativus]	[more]
XP_008441150.1	4.4e-194	97.09	PREDICTED: polyadenylate-binding protein RBP45-like isoform X4 [Cucumis melo]	[more]

BLAST of CsaV3_1G010850 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11650.2	1.7e-126	70.06	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G54900.1	1.1e-122	67.67	RNA-binding protein 45A	[more]
AT4G27000.1	2.2e-118	68.39	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G19350.1	3.1e-101	56.48	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G49600.1	4.1e-101	59.94	RNA-binding protein 47A	[more]

BLAST of CsaV3_1G010850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LEB4\|RBP45_NICPL	6.0e-134	71.91	Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
sp\|Q9SAB3\|RB45B_ARATH	3.0e-125	70.06	Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P...	[more]
sp\|Q9FPJ8\|RB45A_ARATH	2.0e-121	67.67	Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A P...	[more]
sp\|Q93W34\|RP45C_ARATH	3.9e-117	68.39	Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C P...	[more]
sp\|Q9LEB3\|RBP47_NICPL	1.6e-102	58.43	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]

BLAST of CsaV3_1G010850 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B3E5\|A0A1S3B3E5_CUCME	2.9e-194	97.09	polyadenylate-binding protein RBP45-like isoform X4 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A1S3B2A3\|A0A1S3B2A3_CUCME	7.2e-193	96.83	polyadenylate-binding protein RBP45-like isoform X3 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A1S3B2Q3\|A0A1S3B2Q3_CUCME	9.4e-193	96.58	polyadenylate-binding protein RBP45-like isoform X2 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A1S3B2R4\|A0A1S3B2R4_CUCME	1.2e-192	96.33	polyadenylate-binding protein RBP45-like isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A1S3B3F4\|A0A1S3B3F4_CUCME	1.3e-173	89.58	polyadenylate-binding protein RBP45-like OS=Cucumis melo OX=3656 GN=LOC103485380...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009735	response to cytokinin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G010850.1	CsaV3_1G010850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 266..333 e-value: 2.8E-22 score: 90.0 coord: 158..232 e-value: 1.4E-18 score: 77.8 coord: 67..142 e-value: 3.8E-13 score: 59.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 68..132 e-value: 1.9E-12 score: 46.7 coord: 159..227 e-value: 7.3E-13 score: 48.0 coord: 267..331 e-value: 1.2E-17 score: 63.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 265..337 score: 17.899
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 66..146 score: 15.63
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 157..236 score: 16.517
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 144..244 e-value: 1.1E-20 score: 75.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 65..143 e-value: 3.8E-23 score: 83.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 245..347 e-value: 2.5E-27 score: 97.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 384..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 377..402
None	No IPR available	PANTHER	PTHR43955:SF2	SUBFAMILY NOT NAMED	coord: 1..395
None	No IPR available	PANTHER	PTHR43955	FAMILY NOT NAMED	coord: 1..395
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 156..235 e-value: 4.50767E-47 score: 156.67
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 67..145 e-value: 5.13469E-45 score: 151.261
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 264..335 e-value: 1.84215E-37 score: 130.501
None	No IPR available	SUPERFAMILY	SSF81995	beta-sandwich domain of Sec23/24	coord: 2..61
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 250..361
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 64..239

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G010850	CSPI01G10780	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G010850	Cucsa.085910	Cucumber (Gy14) v1	cgycucB089
CsaV3_1G010850	CmaCh13G007330	Cucurbita maxima (Rimu)	cmacucB0249
CsaV3_1G010850	CmaCh18G002500	Cucurbita maxima (Rimu)	cmacucB0474
CsaV3_1G010850	CmoCh13G007620	Cucurbita moschata (Rifu)	cmocucB0235
CsaV3_1G010850	CmoCh18G002770	Cucurbita moschata (Rifu)	cmocucB0457
CsaV3_1G010850	Cp4.1LG09g09000	Cucurbita pepo (Zucchini)	cpecucB0031
CsaV3_1G010850	CsGy1G010670	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G010850	Cla019389	Watermelon (97103) v1	cucwmB013
CsaV3_1G010850	MELO3C002464	Melon (DHL92) v3.5.1	cucmeB024
CsaV3_1G010850	ClCG03G004810	Watermelon (Charleston Gray)	cucwcgB038
CsaV3_1G010850	Lsi02G006070	Bottle gourd (USVL1VR-Ls)	cuclsiB022
CsaV3_1G010850	MELO3C035529.2	Melon (DHL92) v3.6.1	cucmedB022
CsaV3_1G010850	Cla97C03G055960	Watermelon (97103) v2	cucwmbB030
CsaV3_1G010850	Bhi08G001517	Wax gourd	cucwgoB037

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G010850	Cucumber (Chinese Long) v3	cuccucB044
CsaV3_1G010850	Silver-seed gourd	carcucB0529
CsaV3_1G010850	Silver-seed gourd	carcucB0672
CsaV3_1G010850	Silver-seed gourd	carcucB0969
CsaV3_1G010850	Silver-seed gourd	carcucB1049
CsaV3_1G010850	Cucumber (Gy14) v2	cgybcucB247
CsaV3_1G010850	Cucumber (Gy14) v1	cgycucB018
CsaV3_1G010850	Cucurbita maxima (Rimu)	cmacucB0775
CsaV3_1G010850	Cucurbita maxima (Rimu)	cmacucB1005
CsaV3_1G010850	Cucurbita moschata (Rifu)	cmocucB0760
CsaV3_1G010850	Cucurbita moschata (Rifu)	cmocucB0989
CsaV3_1G010850	Cucurbita pepo (Zucchini)	cpecucB0059
CsaV3_1G010850	Cucurbita pepo (Zucchini)	cpecucB0586
CsaV3_1G010850	Cucurbita pepo (Zucchini)	cpecucB0624
CsaV3_1G010850	Wild cucumber (PI 183967)	cpicucB310
CsaV3_1G010850	Bottle gourd (USVL1VR-Ls)	cuclsiB020
CsaV3_1G010850	Melon (DHL92) v3.5.1	cucmeB092
CsaV3_1G010850	Melon (DHL92) v3.6.1	cucmedB085
CsaV3_1G010850	Watermelon (Charleston Gray)	cucwcgB015
CsaV3_1G010850	Watermelon (97103) v1	cucwmB050
CsaV3_1G010850	Watermelon (97103) v2	cucwmbB001
CsaV3_1G010850	Wax gourd	cucwgoB026