CsaV3_1G010530 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G010530
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Ankyrin repeat-containing protein
Location	chr1 : 6564493 .. 6564933 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGAAAGAAAACAACGATGATCATGATGGCCTAACACATCGTCAACTCTTCACAAAAGAGCACGAAAATCTACGGAAAGACGAGGAACAATGGATTAAAAACATGGCAAGCTCGTGCATGCTGGTGGCAACTCTAGTCGTGACAATGGTTTTCGCAGCGTTATATACGCTTCCAGGAGGCAACAATGACAAGGATGGGATTCCTATTTTCGAAAAGGATAAGAAATTTGCAGTGTTCATAATAGCAGATTTTGCCGCTCTGGTGATGTCAACAACTTCTATACTCACCTTTTTGTCAATTTTGATATTGCGCTATGCGGAAGAAGATTTTTTTGGTGTTGTTGCCGATCAAGTTATTGTTCGGATTGGTGACATTGCTTCTTGTTATAACATGCATGGTGGTGGCTTTCTGTGCAACCTTCTTTCTTTCGTATAG

mRNA sequence

ATGAAGATGAAAGAAAACAACGATGATCATGATGGCCTAACACATCGTCAACTCTTCACAAAAGAGCACGAAAATCTACGGAAAGACGAGGAACAATGGATTAAAAACATGGCAAGCTCGTGCATGCTGGTGGCAACTCTAGTCGTGACAATGGTTTTCGCAGCGTTATATACGCTTCCAGGAGGCAACAATGACAAGGATGGGATTCCTATTTTCGAAAAGGATAAGAAATTTGCAGTGTTCATAATAGCAGATTTTGCCGCTCTGGTGATGTCAACAACTTCTATACTCACCTTTTTGTCAATTTTGATATTGCGCTATGCGGAAGAAGATTTTTTTGGTGTTGTTGCCGATCAAGTTATTGTTCGGATTGGTGACATTGCTTCTTGTTATAACATGCATGGTGGTGGCTTTCTGTGCAACCTTCTTTCTTTCGTATAG

Coding sequence (CDS)

ATGAAGATGAAAGAAAACAACGATGATCATGATGGCCTAACACATCGTCAACTCTTCACAAAAGAGCACGAAAATCTACGGAAAGACGAGGAACAATGGATTAAAAACATGGCAAGCTCGTGCATGCTGGTGGCAACTCTAGTCGTGACAATGGTTTTCGCAGCGTTATATACGCTTCCAGGAGGCAACAATGACAAGGATGGGATTCCTATTTTCGAAAAGGATAAGAAATTTGCAGTGTTCATAATAGCAGATTTTGCCGCTCTGGTGATGTCAACAACTTCTATACTCACCTTTTTGTCAATTTTGATATTGCGCTATGCGGAAGAAGATTTTTTTGGTGTTGTTGCCGATCAAGTTATTGTTCGGATTGGTGACATTGCTTCTTGTTATAACATGCATGGTGGTGGCTTTCTGTGCAACCTTCTTTCTTTCGTATAG

Protein sequence

MKMKENNDDHDGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPGGNNDKDGIPIFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDFFGVVADQVIVRIGDIASCYNMHGGGFLCNLLSFV

Homology

[Close]

BLAST of CsaV3_1G010530 vs. NCBI nr
Match: XP_011652574.1 (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37
Identity = 86/112 (76.79%), Postives = 94/112 (83.93%), Query Frame = 0


Query: 1   MKMKENNDDHDGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLP 60
           M+MKEN  DHD  T R+L TKEHE LRKD E WIK MA SCMLVATLV T+VFAA +T+P
Sbjct: 387 MRMKENYGDHDYPTPRELLTKEHEKLRKDGEGWIKTMAGSCMLVATLVDTVVFAAAFTVP 446

Query: 61  GGNNDKDGIPIFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDF 113
           GGNNDK+GIPI  KDKKF +FIIADF A+VMSTTSILTFLSILI RYAEEDF
Sbjct: 447 GGNNDKNGIPILRKDKKFELFIIADFVAMVMSTTSILTFLSILISRYAEEDF 498

[Close]

BLAST of CsaV3_1G010530 vs. NCBI nr
Match: XP_011652584.1 (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X2 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37
Identity = 86/112 (76.79%), Postives = 94/112 (83.93%), Query Frame = 0


Query: 1   MKMKENNDDHDGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLP 60
           M+MKEN  DHD  T R+L TKEHE LRKD E WIK MA SCMLVATLV T+VFAA +T+P
Sbjct: 372 MRMKENYGDHDYPTPRELLTKEHEKLRKDGEGWIKTMAGSCMLVATLVDTVVFAAAFTVP 431

Query: 61  GGNNDKDGIPIFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDF 113
           GGNNDK+GIPI  KDKKF +FIIADF A+VMSTTSILTFLSILI RYAEEDF
Sbjct: 432 GGNNDKNGIPILRKDKKFELFIIADFVAMVMSTTSILTFLSILISRYAEEDF 483

[Close]

BLAST of CsaV3_1G010530 vs. NCBI nr
Match: XP_011652589.1 (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X3 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37
Identity = 86/112 (76.79%), Postives = 94/112 (83.93%), Query Frame = 0


Query: 1   MKMKENNDDHDGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLP 60
           M+MKEN  DHD  T R+L TKEHE LRKD E WIK MA SCMLVATLV T+VFAA +T+P
Sbjct: 367 MRMKENYGDHDYPTPRELLTKEHEKLRKDGEGWIKTMAGSCMLVATLVDTVVFAAAFTVP 426

Query: 61  GGNNDKDGIPIFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDF 113
           GGNNDK+GIPI  KDKKF +FIIADF A+VMSTTSILTFLSILI RYAEEDF
Sbjct: 427 GGNNDKNGIPILRKDKKFELFIIADFVAMVMSTTSILTFLSILISRYAEEDF 478

[Close]

BLAST of CsaV3_1G010530 vs. NCBI nr
Match: XP_008440794.1 (PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis melo])

HSP 1 Score: 151.4 bits (381), Expect = 2.4e-33
Identity = 75/121 (61.98%), Postives = 99/121 (81.82%), Query Frame = 0


Query: 2   KMKENNDDHDGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPG 61
           +MK  N+  D LT R+LFTKEH++LR++ E+W+KN A+SCMLVA L+ T+VFAA +T+PG
Sbjct: 418 EMKMKNEHGDRLTPRELFTKEHKHLRREGEEWMKNTANSCMLVAALIATVVFAAAFTVPG 477

Query: 62  GNNDKDGIPIFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDFFGVVADQVI 121
           GN DKDGIPIF+K++ F VF+I+D AALVMSTTSILTFLSIL  RYAEEDF   +  +++
Sbjct: 478 GNEDKDGIPIFQKNQVFTVFVISDVAALVMSTTSILTFLSILTARYAEEDFLISLPSKLL 537

Query: 122 V 123
           +
Sbjct: 538 I 538

[Close]

BLAST of CsaV3_1G010530 vs. NCBI nr
Match: XP_011652562.1 (PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 2.4e-33
Identity = 77/112 (68.75%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 1   MKMKENNDDHDGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLP 60
           MKMK  +DD   LT R+LFTKEH++L K+ E+W+KN A+SCMLVA L+ T+VFAA +T+P
Sbjct: 152 MKMKNEHDDR--LTPRELFTKEHKHLLKEGEEWMKNTANSCMLVAALIATVVFAAAFTVP 211

Query: 61  GGNNDKDGIPIFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDF 113
           GGN+DKDGIPIF+K++ F VF+I+D AALVMSTTSILTFLSIL  RYAEEDF
Sbjct: 212 GGNDDKDGIPIFQKNQVFTVFVISDVAALVMSTTSILTFLSILTARYAEEDF 261

[Close]

BLAST of CsaV3_1G010530 vs. TAIR10
Match: AT5G35810.1 (Ankyrin repeat family protein)

HSP 1 Score: 105.1 bits (261), Expect = 3.6e-23
Identity = 60/116 (51.72%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 2   KMKENNDDHDGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPG 61
           K K+    HD      LFTKEH+NLRK+ E+W+K  A++C+LV+TL+ T+VFAA +TLPG
Sbjct: 151 KNKKEEVAHD------LFTKEHDNLRKEGEKWMKETATACILVSTLIATVVFAAAFTLPG 210

Query: 62  GNNDKD-----GIPIFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDF 113
           GN+        G P F K+  F VFII+D  AL+ S TSI+ FLSIL  RYAE  F
Sbjct: 211 GNDTSGDIKTLGFPTFRKEFWFEVFIISDSVALLSSVTSIMIFLSILTSRYAEASF 260

[Close]

BLAST of CsaV3_1G010530 vs. TAIR10
Match: AT5G04700.1 (Ankyrin repeat family protein)

HSP 1 Score: 98.6 bits (244), Expect = 3.4e-21
Identity = 47/106 (44.34%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 17  QLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPGGNNDKD-GIPIFEKD 76
           ++FTKEH+ LR++ E+W+K+ A SC LVA L+VT+ FAA++T+PGG +D   G P   +D
Sbjct: 488 EIFTKEHQGLRQEAEKWMKDTAMSCSLVAALIVTVTFAAVFTVPGGTDDNSKGKPFHLRD 547

Query: 77  KKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDFFGVVADQVI 122
           ++F +FI++D  +   S TS+L FL IL  RY+ +DF   +  ++I
Sbjct: 548 RRFIIFIVSDLISCFASCTSVLIFLGILTARYSFDDFLVFLPTKMI 593

[Close]

BLAST of CsaV3_1G010530 vs. TAIR10
Match: AT3G54070.1 (Ankyrin repeat family protein)

HSP 1 Score: 97.4 bits (241), Expect = 7.6e-21
Identity = 55/114 (48.25%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 5   ENNDDHDGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPGGNN 64
           E  +    L H  +FT++HENLRK+ E+W+K  A++CML ATL+ T+VFAA  T+PGGN+
Sbjct: 373 ETKNTKGELAH-DIFTEQHENLRKEGERWMKETATACMLGATLIATVVFAAAITIPGGND 432

Query: 65  DKD------GIPIFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDF 113
           D        G P F K   F +F ++D  AL  S  SI+ FLSI   RYAEEDF
Sbjct: 433 DSGDKANTLGFPNFRKRLLFDIFTLSDSVALFSSMMSIVIFLSIFTSRYAEEDF 485

[Close]

BLAST of CsaV3_1G010530 vs. TAIR10
Match: AT5G04690.1 (Ankyrin repeat family protein)

HSP 1 Score: 94.4 bits (233), Expect = 6.4e-20
Identity = 48/112 (42.86%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 11  DGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPGGNNDKD-GI 70
           + LT  ++F KEHE +R + E+W+K+ A SC LVA L+VT+ FAA++T+PGG +D   G 
Sbjct: 440 ENLTPIEIFRKEHEAMRLEAEKWMKDTAMSCSLVAALIVTVTFAAIFTVPGGTDDNSGGR 499

Query: 71  PIFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDF-FGVVADQV 121
           P    ++ F +FI++D  +   + TS+L FL IL  RYA +DF F + A+ +
Sbjct: 500 PFHRHERIFVIFIVSDLISCFAACTSVLIFLGILTARYAFDDFLFSLPANMI 551

[Close]

BLAST of CsaV3_1G010530 vs. TAIR10
Match: AT5G04730.1 (Ankyrin-repeat containing protein)

HSP 1 Score: 89.0 bits (219), Expect = 2.7e-18
Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 0


Query: 11  DGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPGGNNDKDGIP 70
           D  T RQ+F   HE+LRK+ E+W+K  A++C  VA L+ T+ F A++T+PGG +   G P
Sbjct: 417 DNKTPRQIFEHYHEHLRKEGEEWMKYTATACSFVAALIATVTFQAIFTVPGGIDGTSGSP 476

Query: 71  IFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDF 113
           +   D  F  FI  D  A   S  S+L FLSIL  RY+ +DF
Sbjct: 477 LILNDLHFRAFIFTDTLAFFASCISVLIFLSILTSRYSFDDF 518

[Close]

BLAST of CsaV3_1G010530 vs. Swiss-Prot
Match: sp|A2CIR5|NPR4_ORYSJ (Ankyrin repeat-containing protein NPR4 OS=Oryza sativa subsp. japonica OX=39947 GN=NPR4 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.3e-05
Identity = 38/123 (30.89%), Postives = 61/123 (49.59%), Query Frame = 0


Query: 24  ENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPGGNNDKDGIPIFEKDKKFAVFII 83
           + LRK   + I N  +S  +VA L  T+ FAA++T+PGGN + +G+ +  +   F +F I
Sbjct: 397 KELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGNAN-NGVAVVVQAASFRIFFI 456

Query: 84  ADFAALVMSTTSILTFLSILILRYAEEDFFGVV--------ADQVIVRIGDIASCYNMHG 139
             F A+ + T+  +  + I ++R   +    VV           V   I  IASCY + G
Sbjct: 457 --FNAIALFTSLAVVVVQITVVRGETKSERKVVEVINKLMWLASVCTTISFIASCYIVLG 516

[Close]

BLAST of CsaV3_1G010530 vs. Swiss-Prot
Match: sp|Q9C7A2|ITN1_ARATH (Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana OX=3702 GN=ITN1 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.1e-04
Identity = 35/104 (33.65%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 7   NDDHDGLTHRQLFTKEHEN----LRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPGG 66
           ND H  L   +   K   N    LRK   + I N  +S  +VA L  T+ FAA++T+PGG
Sbjct: 384 NDVHIQLEQTKRTNKNVHNISKELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGG 443

Query: 67  NNDKDGIPIFEKDKKFAVFIIADFAALVMSTTSILTFLSILILR 107
           +N+ DG  +      F +F I  F AL + T+  +  + I ++R
Sbjct: 444 DNN-DGSAVVVGRASFKIFFI--FNALALFTSLAVVVVQITLVR 484

[Close]

BLAST of CsaV3_1G010530 vs. TrEMBL
Match: tr|A0A1S3B1Y7|A0A1S3B1Y7_CUCME (ankyrin repeat-containing protein At3g12360-like OS=Cucumis melo OX=3656 GN=LOC103485099 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-33
Identity = 75/121 (61.98%), Postives = 99/121 (81.82%), Query Frame = 0


Query: 2   KMKENNDDHDGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPG 61
           +MK  N+  D LT R+LFTKEH++LR++ E+W+KN A+SCMLVA L+ T+VFAA +T+PG
Sbjct: 418 EMKMKNEHGDRLTPRELFTKEHKHLRREGEEWMKNTANSCMLVAALIATVVFAAAFTVPG 477

Query: 62  GNNDKDGIPIFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDFFGVVADQVI 121
           GN DKDGIPIF+K++ F VF+I+D AALVMSTTSILTFLSIL  RYAEEDF   +  +++
Sbjct: 478 GNEDKDGIPIFQKNQVFTVFVISDVAALVMSTTSILTFLSILTARYAEEDFLISLPSKLL 537

Query: 122 V 123
           +
Sbjct: 538 I 538

[Close]

BLAST of CsaV3_1G010530 vs. TrEMBL
Match: tr|A0A1S4E238|A0A1S4E238_CUCME (ankyrin repeat-containing protein At3g12360-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990316 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 72/105 (68.57%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 8   DDHDGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPGGNNDKD 67
           D  D LT RQLF+++HE LRKD E+W+K+ A+SCM+VATL+ T+VFAA +T PGGNNDKD
Sbjct: 261 DPADTLTPRQLFSRQHEQLRKDGEEWMKSTANSCMVVATLITTVVFAAAFTFPGGNNDKD 320

Query: 68  GIPIFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDF 113
           G PIF +++ F VFII+D AALV+STTSILTFLSIL  RYAEEDF
Sbjct: 321 GTPIFRQNQAFTVFIISDVAALVLSTTSILTFLSILTSRYAEEDF 365

[Close]

BLAST of CsaV3_1G010530 vs. TrEMBL
Match: tr|A0A1S4E2U7|A0A1S4E2U7_CUCME (ankyrin repeat-containing protein At3g12360-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990316 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 72/105 (68.57%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 8   DDHDGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPGGNNDKD 67
           D  D LT RQLF+++HE LRKD E+W+K+ A+SCM+VATL+ T+VFAA +T PGGNNDKD
Sbjct: 211 DPADTLTPRQLFSRQHEQLRKDGEEWMKSTANSCMVVATLITTVVFAAAFTFPGGNNDKD 270

Query: 68  GIPIFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDF 113
           G PIF +++ F VFII+D AALV+STTSILTFLSIL  RYAEEDF
Sbjct: 271 GTPIFRQNQAFTVFIISDVAALVLSTTSILTFLSILTSRYAEEDF 315

[Close]

BLAST of CsaV3_1G010530 vs. TrEMBL
Match: tr|A0A1S3B2F0|A0A1S3B2F0_CUCME (ankyrin repeat-containing protein At5g02620-like OS=Cucumis melo OX=3656 GN=LOC103485059 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.4e-29
Identity = 67/100 (67.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 13  LTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPGGNNDKDGIPIF 72
           LT R+LFTKEH++L KD E+W+KN A+SCMLVATL+ T+VFAA +T+PGGN+DK G P F
Sbjct: 543 LTPRELFTKEHKSLLKDGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKSGTPNF 602

Query: 73  EKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDF 113
            +++ F VF+I D AALV STTSILTFLSIL  RYAE+DF
Sbjct: 603 RQNQAFTVFVITDVAALVFSTTSILTFLSILTSRYAEDDF 642

[Close]

BLAST of CsaV3_1G010530 vs. TrEMBL
Match: tr|A0A251SHX3|A0A251SHX3_HELAN (Putative ankyrin repeat-containing domain, PGG domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0442181 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-26
Identity = 64/117 (54.70%), Postives = 86/117 (73.50%), Query Frame = 0


Query: 11  DGLTHRQLFTKEHENLRKDEEQWIKNMASSCMLVATLVVTMVFAALYTLPGGNNDKDGIP 70
           DGLT R+LFT+EH+ L K+ E+WIK +AS CM+VA L+ T+VFAA +T+PGG N  DGIP
Sbjct: 230 DGLTPRELFTREHKELIKEGEEWIKGVASQCMVVAALIATIVFAAAFTIPGGYNQNDGIP 289

Query: 71  IFEKDKKFAVFIIADFAALVMSTTSILTFLSILILRYAEEDFFGVVADQVIVRIGDI 128
           IF +   F VF++AD  +L +STTSILTFLSIL  RYAE DF   +  ++++ I  +
Sbjct: 290 IFYRKPIFVVFVVADAMSLFLSTTSILTFLSILTSRYAEHDFVESLPKKLMLGISTL 346

The following BLAST results are available for this feature:

BLAST of CsaV3_1G010530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652574.1	1.6e-37	76.79	PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis ...	[more]
XP_011652584.1	1.6e-37	76.79	PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X2 [Cucumis ...	[more]
XP_011652589.1	1.6e-37	76.79	PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X3 [Cucumis ...	[more]
XP_008440794.1	2.4e-33	61.98	PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis melo]	[more]
XP_011652562.1	2.4e-33	68.75	PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis sativus]	[more]

BLAST of CsaV3_1G010530 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35810.1	3.6e-23	51.72	Ankyrin repeat family protein	[more]
AT5G04700.1	3.4e-21	44.34	Ankyrin repeat family protein	[more]
AT3G54070.1	7.6e-21	48.25	Ankyrin repeat family protein	[more]
AT5G04690.1	6.4e-20	42.86	Ankyrin repeat family protein	[more]
AT5G04730.1	2.7e-18	44.12	Ankyrin-repeat containing protein	[more]

BLAST of CsaV3_1G010530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A2CIR5\|NPR4_ORYSJ	3.3e-05	30.89	Ankyrin repeat-containing protein NPR4 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
sp\|Q9C7A2\|ITN1_ARATH	8.1e-04	33.65	Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana OX=3702 GN=ITN1 P...	[more]

BLAST of CsaV3_1G010530 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B1Y7\|A0A1S3B1Y7_CUCME	1.6e-33	61.98	ankyrin repeat-containing protein At3g12360-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A1S4E238\|A0A1S4E238_CUCME	1.2e-31	68.57	ankyrin repeat-containing protein At3g12360-like isoform X1 OS=Cucumis melo OX=3...	[more]
tr\|A0A1S4E2U7\|A0A1S4E2U7_CUCME	1.2e-31	68.57	ankyrin repeat-containing protein At3g12360-like isoform X2 OS=Cucumis melo OX=3...	[more]
tr\|A0A1S3B2F0\|A0A1S3B2F0_CUCME	5.4e-29	67.00	ankyrin repeat-containing protein At5g02620-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A251SHX3\|A0A251SHX3_HELAN	1.1e-26	54.70	Putative ankyrin repeat-containing domain, PGG domain protein OS=Helianthus annu...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR026961	PGG_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G010530.1	CsaV3_1G010530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 32..113 e-value: 2.4E-22 score: 78.8
None	No IPR available	PANTHER	PTHR24177:SF33	ANKYRIN REPEAT FAMILY PROTEIN-RELATED	coord: 7..118
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 7..118

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G010530	Cucumber (Chinese Long) v3	cuccucB044
CsaV3_1G010530	Silver-seed gourd	carcucB0529
CsaV3_1G010530	Silver-seed gourd	carcucB0672
CsaV3_1G010530	Silver-seed gourd	carcucB0969
CsaV3_1G010530	Silver-seed gourd	carcucB1049
CsaV3_1G010530	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G010530	Cucumber (Gy14) v2	cgybcucB247
CsaV3_1G010530	Cucumber (Gy14) v1	cgycucB018
CsaV3_1G010530	Cucumber (Gy14) v1	cgycucB089
CsaV3_1G010530	Cucurbita maxima (Rimu)	cmacucB0249
CsaV3_1G010530	Cucurbita maxima (Rimu)	cmacucB0474
CsaV3_1G010530	Cucurbita maxima (Rimu)	cmacucB0775
CsaV3_1G010530	Cucurbita maxima (Rimu)	cmacucB1005
CsaV3_1G010530	Cucurbita moschata (Rifu)	cmocucB0235
CsaV3_1G010530	Cucurbita moschata (Rifu)	cmocucB0457
CsaV3_1G010530	Cucurbita moschata (Rifu)	cmocucB0760
CsaV3_1G010530	Cucurbita moschata (Rifu)	cmocucB0989
CsaV3_1G010530	Cucurbita pepo (Zucchini)	cpecucB0031
CsaV3_1G010530	Cucurbita pepo (Zucchini)	cpecucB0059
CsaV3_1G010530	Cucurbita pepo (Zucchini)	cpecucB0586
CsaV3_1G010530	Cucurbita pepo (Zucchini)	cpecucB0624
CsaV3_1G010530	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G010530	Wild cucumber (PI 183967)	cpicucB009
CsaV3_1G010530	Wild cucumber (PI 183967)	cpicucB010
CsaV3_1G010530	Wild cucumber (PI 183967)	cpicucB310
CsaV3_1G010530	Bottle gourd (USVL1VR-Ls)	cuclsiB020
CsaV3_1G010530	Bottle gourd (USVL1VR-Ls)	cuclsiB022
CsaV3_1G010530	Bottle gourd (USVL1VR-Ls)	cuclsiB029
CsaV3_1G010530	Melon (DHL92) v3.5.1	cucmeB024
CsaV3_1G010530	Melon (DHL92) v3.5.1	cucmeB035
CsaV3_1G010530	Melon (DHL92) v3.5.1	cucmeB092
CsaV3_1G010530	Melon (DHL92) v3.6.1	cucmedB022
CsaV3_1G010530	Melon (DHL92) v3.6.1	cucmedB032
CsaV3_1G010530	Melon (DHL92) v3.6.1	cucmedB085
CsaV3_1G010530	Watermelon (Charleston Gray)	cucwcgB015
CsaV3_1G010530	Watermelon (Charleston Gray)	cucwcgB038
CsaV3_1G010530	Watermelon (97103) v1	cucwmB013
CsaV3_1G010530	Watermelon (97103) v1	cucwmB050
CsaV3_1G010530	Watermelon (97103) v2	cucwmbB001
CsaV3_1G010530	Watermelon (97103) v2	cucwmbB030
CsaV3_1G010530	Watermelon (97103) v2	cucwmbB040
CsaV3_1G010530	Wax gourd	cucwgoB037