CsaV3_1G009440 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G009440
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	NAC domain-containing protein 105-like
Location	chr1 : 5856082 .. 5857507 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCGAGCCTGATTCCCGTGGGTTACGTCTTTTGTCCCACGGAGGAAGAACTGTTGGGTTACTATCTCTACAGCAAAGTTTTGGGAGAACAAGCTTCTCCACTTGTGTTGCCGGTGATCGATCTTTACACCCAAGAGCCCTCTCAAATATGGCAACAATGTAGAGGGGTTGATAATAAAGATATCTATTTCTTCACTACTCTCCAAAAAAAGAAATCTCGTATCATCCGAAAGGTTGGTTCTAATGGTGGCACTTGGAGCGGTGAGAACAAACCTCAACAAGTATTTTCTTCAACTATTGATAATCTCCTCCTTGGCACCATGAAACGGTTTCGATATGAGAAATCTCAAGTAAAAGAGGATTGTACATGGATTATGTATGAGTATACCCTCAATCCATTTATCGTACCAGAAGGGTTGGTGCATGATTCCTATGTGCTTTGTATGATTCGGAAAAAGATAGTCAAATCAGAAAAAATGGTCATGGCCTCAAACAAAAGACAAGCATCAAATAATAATTGGCCAATGACAAGTATGCATGTAGATAATCAGAACCACAAACGCATGAAATTACAAGAGGAAGCTGTGGTTGATTGCATCGATGCTACTATTGGATGGTAAGTACAATTTTAAGAAATTTTGATCGTTAAAAATTATTTTTTATTATATTTTGTTCATGTCTAACTAACAAGTATATGTTAATTTTGTTGATGCATTTTTTTCACAATGCATGTTCTTAAATTAACTTTTTTTTTATTTATTTTTATCATAGTCCAACAACACAAATGACATCATGTTTTCAAAGTTTATCAAATGTTGCATCGAATGAAGCTGTGGATGACTTGCAGCATGAAGATTGCATCAATGTTCATACTGAATGGTACGTACAATTTTAATTAATTTTGATCGTTAAAAGTTATTTTTAATTATCATGTTTAACAAGTACATGTTAATTTTGTTGATGCATTTTTTTAAAAATACATGTTCCTAAACTATTTTTCTTCTCATAGTCCAACAACACAAATGGAATCATGTTTTCAAGCTATATCAAATGTTGCATCCAATGAAGCCATGGTTGAGTTACATAACGAATGTTGCATCAATACTCCTATTGAATGGTCAGTACGATTTTAATTAATTTTGATCGTTAAAGTTATTCTTATTTATATTTTGTTCATGTCTAACGAGTACATGTTAATTTTATTATGCATTTCTTTTAACGATGCATGTTTTTAAACTTTTTTTTTTTTTGTTTTCTCATAGTTCAACCACACAAAAAGAATCATGTTTTCAAGATTTATCAAATGGTTACTTATTATTTGCAAACGAGAATGAGAATGAAATTGAACCATGCAACAACGGGGAACTACCAAACGTTGAAGATGGTTTGAATTATGACAATGAGTGGTATTTCAGACTATGA

mRNA sequence

ATGGATCCGAGCCTGATTCCCGTGGGTTACGTCTTTTGTCCCACGGAGGAAGAACTGTTGGGTTACTATCTCTACAGCAAAGTTTTGGGAGAACAAGCTTCTCCACTTGTGTTGCCGGTGATCGATCTTTACACCCAAGAGCCCTCTCAAATATGGCAACAATGTAGAGGGGTTGATAATAAAGATATCTATTTCTTCACTACTCTCCAAAAAAAGAAATCTCGTATCATCCGAAAGGTTGGTTCTAATGGTGGCACTTGGAGCGGTGAGAACAAACCTCAACAAGTATTTTCTTCAACTATTGATAATCTCCTCCTTGGCACCATGAAACGGTTTCGATATGAGAAATCTCAAGTAAAAGAGGATTGTACATGGATTATGTATGAGTATACCCTCAATCCATTTATCGTACCAGAAGGGTTGGTGCATGATTCCTATGTGCTTTGTATGATTCGGAAAAAGATAGTCAAATCAGAAAAAATGGTCATGGCCTCAAACAAAAGACAAGCATCAAATAATAATTGGCCAATGACAAGTATGCATGTAGATAATCAGAACCACAAACGCATGAAATTACAAGAGGAAGCTGTGGTTGATTGCATCGATGCTACTATTGGATGTCCAACAACACAAATGACATCATGTTTTCAAAGTTTATCAAATGTTGCATCGAATGAAGCTGTGGATGACTTGCAGCATGAAGATTGCATCAATGTTCATACTGAATGTCCAACAACACAAATGGAATCATGTTTTCAAGCTATATCAAATGTTGCATCCAATGAAGCCATGGTTGAGTTACATAACGAATGTTGCATCAATACTCCTATTGAATGTTCAACCACACAAAAAGAATCATGTTTTCAAGATTTATCAAATGGTTACTTATTATTTGCAAACGAGAATGAGAATGAAATTGAACCATGCAACAACGGGGAACTACCAAACGTTGAAGATGGTTTGAATTATGACAATGAGTGGTATTTCAGACTATGA

Coding sequence (CDS)

ATGGATCCGAGCCTGATTCCCGTGGGTTACGTCTTTTGTCCCACGGAGGAAGAACTGTTGGGTTACTATCTCTACAGCAAAGTTTTGGGAGAACAAGCTTCTCCACTTGTGTTGCCGGTGATCGATCTTTACACCCAAGAGCCCTCTCAAATATGGCAACAATGTAGAGGGGTTGATAATAAAGATATCTATTTCTTCACTACTCTCCAAAAAAAGAAATCTCGTATCATCCGAAAGGTTGGTTCTAATGGTGGCACTTGGAGCGGTGAGAACAAACCTCAACAAGTATTTTCTTCAACTATTGATAATCTCCTCCTTGGCACCATGAAACGGTTTCGATATGAGAAATCTCAAGTAAAAGAGGATTGTACATGGATTATGTATGAGTATACCCTCAATCCATTTATCGTACCAGAAGGGTTGGTGCATGATTCCTATGTGCTTTGTATGATTCGGAAAAAGATAGTCAAATCAGAAAAAATGGTCATGGCCTCAAACAAAAGACAAGCATCAAATAATAATTGGCCAATGACAAGTATGCATGTAGATAATCAGAACCACAAACGCATGAAATTACAAGAGGAAGCTGTGGTTGATTGCATCGATGCTACTATTGGATGTCCAACAACACAAATGACATCATGTTTTCAAAGTTTATCAAATGTTGCATCGAATGAAGCTGTGGATGACTTGCAGCATGAAGATTGCATCAATGTTCATACTGAATGTCCAACAACACAAATGGAATCATGTTTTCAAGCTATATCAAATGTTGCATCCAATGAAGCCATGGTTGAGTTACATAACGAATGTTGCATCAATACTCCTATTGAATGTTCAACCACACAAAAAGAATCATGTTTTCAAGATTTATCAAATGGTTACTTATTATTTGCAAACGAGAATGAGAATGAAATTGAACCATGCAACAACGGGGAACTACCAAACGTTGAAGATGGTTTGAATTATGACAATGAGTGGTATTTCAGACTATGA

Protein sequence

MDPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDNKDIYFFTTLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVKEDCTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRQASNNNWPMTSMHVDNQNHKRMKLQEEAVVDCIDATIGCPTTQMTSCFQSLSNVASNEAVDDLQHEDCINVHTECPTTQMESCFQAISNVASNEAMVELHNECCINTPIECSTTQKESCFQDLSNGYLLFANENENEIEPCNNGELPNVEDGLNYDNEWYFRL

Homology

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BLAST of CsaV3_1G009440 vs. NCBI nr
Match: XP_011660358.1 (PREDICTED: uncharacterized protein LOC105436381 [Cucumis sativus])

HSP 1 Score: 531.9 bits (1369), Expect = 1.5e-147
Identity = 326/327 (99.69%), Postives = 327/327 (100.00%), Query Frame = 0


Query: 1   MDPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDN 60
           MDPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDN
Sbjct: 1   MDPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDN 60

Query: 61  KDIYFFTTLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVK 120
           KDIYFFTTLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVK
Sbjct: 61  KDIYFFTTLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVK 120

Query: 121 EDCTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRQASNNNWPMTSM 180
           EDCTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKR+ASNNNWPMTSM
Sbjct: 121 EDCTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRRASNNNWPMTSM 180

Query: 181 HVDNQNHKRMKLQEEAVVDCIDATIGCPTTQMTSCFQSLSNVASNEAVDDLQHXXXXXXX 240
           HVDNQNHKRMKLQEEAVVDCIDATIGCPTTQMTSCFQSLSNVASNEAVDDLQHXXXXXXX
Sbjct: 181 HVDNQNHKRMKLQEEAVVDCIDATIGCPTTQMTSCFQSLSNVASNEAVDDLQHXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYLLFAN 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYLLFAN
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYLLFAN 300

Query: 301 ENENEIEPCNNGELPNVEDGLNYDNEW 328
           ENENEIEPCNNGELPNVEDGLNYDNEW
Sbjct: 301 ENENEIEPCNNGELPNVEDGLNYDNEW 327

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BLAST of CsaV3_1G009440 vs. NCBI nr
Match: XP_008443570.1 (PREDICTED: NAC domain-containing protein 105-like [Cucumis melo])

HSP 1 Score: 347.1 bits (889), Expect = 6.8e-92
Identity = 190/342 (55.56%), Postives = 219/342 (64.04%), Query Frame = 0


Query: 1   MDPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDN 60
           MDPS++P+G+ FCPT+EELLGYYL++KVLGEQA  L LPVIDLY  EPS+IWQ+C GVD 
Sbjct: 1   MDPSMLPLGFTFCPTDEELLGYYLFNKVLGEQAPLLELPVIDLYIHEPSEIWQKCGGVDK 60

Query: 61  KDIYFFTTLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVK 120
           +D+YFFTTL+KKKSRIIRKVGSNG TWS EN+ +QVFSSTID+LLLG++KRF Y+K + K
Sbjct: 61  QDVYFFTTLKKKKSRIIRKVGSNGNTWSCENRARQVFSSTIDHLLLGSVKRFHYQKPKAK 120

Query: 121 E-----DCTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRQASNNNW 180
           +     DCTWIMYEYTL+P IVP+GLVHDSYVLCMIRKKIVKS+K+VM S KRQ S +NW
Sbjct: 121 DCTDINDCTWIMYEYTLDPSIVPKGLVHDSYVLCMIRKKIVKSQKIVMTSKKRQIS-SNW 180

Query: 181 PMTSMHVDNQNHKRMKLQEEAVVD------CIDATIGCP-TTQMTSCFQSLSNVASNEAV 240
           P TSMHVD+Q HK  +L+E  VVD      CIDA I CP TTQM SC Q LSN       
Sbjct: 181 PTTSMHVDDQTHKHRRLEENDVVDLQKEYCCIDAPIECPTTTQMESCNQGLSN------D 240

Query: 241 DDLQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           D L                                                         
Sbjct: 241 DHLIFAKEIEMEIERCNHVELSNVEDGLIMTRLEEKDVVDLQKECCIDVAIGCPIELCRQ 300

Query: 301 XXXXXGYLLFANENENEIEPCNNGELPNVEDGLNYDNEWYFR 331
                  L+FA   ENEIE  NN E  NVEDG NYDNEWYFR
Sbjct: 301 DLSNDDDLIFAKAIENEIERYNNMEQSNVEDGSNYDNEWYFR 335

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BLAST of CsaV3_1G009440 vs. NCBI nr
Match: KGN65107.1 (hypothetical protein Csa_1G224380 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53
Identity = 105/209 (50.24%), Postives = 151/209 (72.25%), Query Frame = 0


Query: 8   VGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDNKDIYFFT 67
           +GY FCPT+EELL YYLY KV+G    P++L V+D+YT+EP QIWQQC GVD +D++FFT
Sbjct: 1   MGYTFCPTDEELLCYYLYHKVVGGFVPPIMLSVVDIYTKEPPQIWQQCGGVDGQDVHFFT 60

Query: 68  TLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVKE------ 127
            L+KKKSR++RKVG NG TWSGE+K  +VFS   +N L+G  KRF YE  ++K+      
Sbjct: 61  CLKKKKSRVVRKVGPNGATWSGESKATKVFSH--NNTLVGDFKRFHYENPKMKKGGHHNN 120

Query: 128 DCTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRQASNNNWPMTS-- 187
           + +WIMYEYTL+P +VPEG+VH S+VL M+RKKI+K +K   ++ K+ +S  +WP T+  
Sbjct: 121 NYSWIMYEYTLHPNLVPEGVVHHSFVLFMLRKKILKQDKRAFSAIKQTSSCLDWPNTTKA 180

Query: 188 ------MHVDNQNHKRMKLQEEAVVDCID 203
                 +H+D+ N KR +++E+  +D ++
Sbjct: 181 TTTQLEVHIDDLNTKRRRVEEQICIDRVE 207

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BLAST of CsaV3_1G009440 vs. NCBI nr
Match: XP_022934631.1 (NAC domain-containing protein 12-like [Cucurbita moschata])

HSP 1 Score: 209.5 bits (532), Expect = 1.7e-50
Identity = 101/183 (55.19%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 1   MDPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDN 60
           MD S+ P GY F PT+EELL YYL+ K++G+    + LPVID+Y+ EP+ IWQQC G+++
Sbjct: 1   MDSSMFPFGYDFAPTDEELLIYYLFHKIVGDIVPSISLPVIDIYSHEPAMIWQQCGGMED 60

Query: 61  KDIYFFTTLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKS--- 120
           KDIYFFTTL+KKKSRIIRKVG NGGTWSGE+K  +VFSS  +N  +GT+KRF YE S   
Sbjct: 61  KDIYFFTTLKKKKSRIIRKVGLNGGTWSGESKGHKVFSSA-NNAPIGTIKRFHYETSGGV 120

Query: 121 -QVKEDCTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRQASNNNWP 180
               +DC+WIM+EYTL+P ++  G VHDSYV+C+IRK+I+K  +  ++S  +     N P
Sbjct: 121 NANDDDCSWIMHEYTLDPTVLTNGFVHDSYVVCLIRKRILKKVRNTVSSTIQAPFVFNGP 180

[Close]

BLAST of CsaV3_1G009440 vs. NCBI nr
Match: XP_023528741.1 (transcription factor JUNGBRUNNEN 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.5 bits (532), Expect = 1.7e-50
Identity = 101/183 (55.19%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 1   MDPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDN 60
           MD S+ P GY F PT+EELL YYL+ K++G+    + LPVID+Y+ EP+ IWQQC G+++
Sbjct: 1   MDSSMFPFGYDFAPTDEELLIYYLFHKIVGDIVPSISLPVIDIYSHEPAMIWQQCGGMED 60

Query: 61  KDIYFFTTLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKS--- 120
           KDIYFFTTL+KKKSRIIRKVG NGGTWSGE+K  +VFSS  +N  +GT+KRF YE S   
Sbjct: 61  KDIYFFTTLKKKKSRIIRKVGINGGTWSGESKGHKVFSSA-NNAPIGTIKRFHYETSGGV 120

Query: 121 -QVKEDCTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRQASNNNWP 180
               +DC+WIM+EYTL+P ++  G VHDSYV+C+IRK+I+K  +  ++S  +     N P
Sbjct: 121 NANDDDCSWIMHEYTLDPTVLTNGFVHDSYVVCLIRKRILKKVRNTVSSTIQAPFVFNGP 180

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BLAST of CsaV3_1G009440 vs. TAIR10
Match: AT3G15170.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 76.3 bits (186), Expect = 4.1e-14
Identity = 53/177 (29.94%), Postives = 87/177 (49.15%), Query Frame = 0


Query: 2   DPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDNK 61
           D SL+P G+ F PT+EEL+ YYL  KVL    S   +  +DL   EP ++ ++ + +  K
Sbjct: 16  DESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAK-MGEK 75

Query: 62  DIYFFTTLQKKKSRIIR-KVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVK 121
           + YFFT   +K    +R    +  G W    K +++ SS   + LLG  K   + K +  
Sbjct: 76  EWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKS-LLGMKKTLVFYKGRAP 135

Query: 122 --EDCTWIMYEYTLN---PFIVPEGLVHDSYVLCMI--RKKIVKSEKMVMASNKRQA 171
             E   W+M+EY L+    +        D +VLC +  +  +V  E  +++S+   A
Sbjct: 136 KGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSGVVSRETNLISSSSSSA 190

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BLAST of CsaV3_1G009440 vs. TAIR10
Match: AT1G54330.1 (NAC domain containing protein 20)

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-13
Identity = 50/164 (30.49%), Postives = 77/164 (46.95%), Query Frame = 0


Query: 1   MDPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDN 60
           M P  +P G+ F PT+EEL+ YYL  KV G+     ++P +DLY  EP  + ++     N
Sbjct: 1   MAPMSLPPGFRFHPTDEELVAYYLDRKVNGQAIELEIIPEVDLYKCEPWDLPEKSFLPGN 60

Query: 61  -KDIYFFTTLQKKKSRIIR-KVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQ 120
             + YF++T  KK     R    +  G W    K + V S     + +G  K   Y + +
Sbjct: 61  DMEWYFYSTRDKKYPNGSRTNRATRAGYWKATGKDRTVESK---KMKMGMKKTLVYYRGR 120

Query: 121 VKED--CTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEK 161
                   W+M+EY L     P   + +SY LC + KK ++  K
Sbjct: 121 APHGLRTNWVMHEYRLTH--APSSSLKESYALCRVFKKNIQIPK 159

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BLAST of CsaV3_1G009440 vs. TAIR10
Match: AT2G24430.1 (NAC domain containing protein 38)

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-13
Identity = 43/152 (28.29%), Postives = 78/152 (51.32%), Query Frame = 0


Query: 6   IPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDNKDIYF 65
           +P G+ F PT+EEL+ YYL +K+  +  +   +  +DL   EP ++ ++ + +  K+ YF
Sbjct: 16  LPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLNKSEPWELPEKAK-MGGKEWYF 75

Query: 66  FTTLQKKKSRIIR-KVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVK--ED 125
           F+   +K    +R    +N G W    K +++F+ST    L+G  K   + + +    E 
Sbjct: 76  FSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSE-LVGMKKTLVFYRGRAPRGEK 135

Query: 126 CTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKK 155
             W+M+EY L+          D +V+C + KK
Sbjct: 136 TCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKK 165

[Close]

BLAST of CsaV3_1G009440 vs. TAIR10
Match: AT3G10490.2 (NAC domain containing protein 52)

HSP 1 Score: 73.2 bits (178), Expect = 3.5e-13
Identity = 51/157 (32.48%), Postives = 77/157 (49.04%), Query Frame = 0


Query: 4   SLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCR-GVDNKD 63
           SL P G+ F PT+EEL+ YYL  KVLG+      +  +D+Y  EP  +    R    +++
Sbjct: 26  SLAP-GFRFHPTDEELVSYYLKRKVLGQPVRFDAIGEVDIYKHEPWDLAVFSRLKTRDQE 85

Query: 64  IYFFTTLQKKKSRIIR-KVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVKE 123
            YF++ L KK     R    +N G W    K +++     D LLLG  K   +   +  +
Sbjct: 86  WYFYSALDKKYGNGARMNRATNRGYWKATGKDREI---RRDILLLGMKKTLVFHSGRAPD 145

Query: 124 D--CTWIMYEYTLNPFIVPE--GLVHDSYVLCMIRKK 155
                W+M+EY L  +   +   LV D+YVLC +  K
Sbjct: 146 GLRTNWVMHEYRLVEYETEKNGNLVQDAYVLCRVFHK 178

[Close]

BLAST of CsaV3_1G009440 vs. TAIR10
Match: AT5G46590.1 (NAC domain containing protein 96)

HSP 1 Score: 73.2 bits (178), Expect = 3.5e-13
Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = 0


Query: 1   MDPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDN 60
           M  S +P G+ F PT+EEL+ YYL  KV G +    V+PVIDLY+ +P ++  +   + N
Sbjct: 1   MGSSCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDK-SFLPN 60

Query: 61  KDI--YFFTTLQKKKSRIIR-KVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKS 120
           +D+  YFF +  KK     R   G+  G W    K +++ S +  + ++G  K   + K 
Sbjct: 61  RDMEWYFFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSRS--SSIIGYRKTLVFYKG 120

Query: 121 Q--VKEDCTWIMYEYTLNPFIVPEGL--VHDSYVLCMIRKK 155
           +  + +   WIM+EY L      +G   +  ++VLC +  K
Sbjct: 121 RAPLGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMK 158

[Close]

BLAST of CsaV3_1G009440 vs. Swiss-Prot
Match: sp|Q9FRV4|NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.4e-13
Identity = 53/177 (29.94%), Postives = 87/177 (49.15%), Query Frame = 0


Query: 2   DPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDNK 61
           D SL+P G+ F PT+EEL+ YYL  KVL    S   +  +DL   EP ++ ++ + +  K
Sbjct: 16  DESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAK-MGEK 75

Query: 62  DIYFFTTLQKKKSRIIR-KVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVK 121
           + YFFT   +K    +R    +  G W    K +++ SS   + LLG  K   + K +  
Sbjct: 76  EWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKS-LLGMKKTLVFYKGRAP 135

Query: 122 --EDCTWIMYEYTLN---PFIVPEGLVHDSYVLCMI--RKKIVKSEKMVMASNKRQA 171
             E   W+M+EY L+    +        D +VLC +  +  +V  E  +++S+   A
Sbjct: 136 KGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSGVVSRETNLISSSSSSA 190

[Close]

BLAST of CsaV3_1G009440 vs. Swiss-Prot
Match: sp|Q9SQY0|NAC52_ARATH (NAC domain containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=NAC052 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 6.2e-12
Identity = 51/157 (32.48%), Postives = 77/157 (49.04%), Query Frame = 0


Query: 4   SLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCR-GVDNKD 63
           SL P G+ F PT+EEL+ YYL  KVLG+      +  +D+Y  EP  +    R    +++
Sbjct: 26  SLAP-GFRFHPTDEELVSYYLKRKVLGQPVRFDAIGEVDIYKHEPWDLAVFSRLKTRDQE 85

Query: 64  IYFFTTLQKKKSRIIR-KVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVKE 123
            YF++ L KK     R    +N G W    K +++     D LLLG  K   +   +  +
Sbjct: 86  WYFYSALDKKYGNGARMNRATNRGYWKATGKDREI---RRDILLLGMKKTLVFHSGRAPD 145

Query: 124 D--CTWIMYEYTLNPFIVPE--GLVHDSYVLCMIRKK 155
                W+M+EY L  +   +   LV D+YVLC +  K
Sbjct: 146 GLRTNWVMHEYRLVEYETEKNGNLVQDAYVLCRVFHK 178

[Close]

BLAST of CsaV3_1G009440 vs. Swiss-Prot
Match: sp|Q9LS24|NAC96_ARATH (NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 6.2e-12
Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = 0


Query: 1   MDPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDN 60
           M  S +P G+ F PT+EEL+ YYL  KV G +    V+PVIDLY+ +P ++  +   + N
Sbjct: 1   MGSSCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDK-SFLPN 60

Query: 61  KDI--YFFTTLQKKKSRIIR-KVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKS 120
           +D+  YFF +  KK     R   G+  G W    K +++ S +  + ++G  K   + K 
Sbjct: 61  RDMEWYFFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSRS--SSIIGYRKTLVFYKG 120

Query: 121 Q--VKEDCTWIMYEYTLNPFIVPEGL--VHDSYVLCMIRKK 155
           +  + +   WIM+EY L      +G   +  ++VLC +  K
Sbjct: 121 RAPLGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMK 158

[Close]

BLAST of CsaV3_1G009440 vs. Swiss-Prot
Match: sp|Q9FFI5|NAC86_ARATH (NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-11
Identity = 51/168 (30.36%), Postives = 81/168 (48.21%), Query Frame = 0


Query: 1   MDPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDN 60
           M P  +P G+ F PT+EEL+ YYL  K+ G++    ++P +DLY  EP  +  +      
Sbjct: 1   MAPVSLPPGFRFHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKSLIPSK 60

Query: 61  KDIYFFTTLQKKK----SRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEK 120
              +FF + + +K    SR  R   + GG W    K ++V   +  +  +GT K   Y +
Sbjct: 61  DQEWFFFSPRDRKYPNGSRTNR--ATKGGYWKATGKDRRV---SWRDRAIGTKKTLVYYR 120

Query: 121 SQVKEDCT--WIMYEYTLNPF-IVPEGL-VHDSYVLCMIRKKIVKSEK 161
            +        W+M+EY L+     P    + D+Y LC + KKIV   K
Sbjct: 121 GRAPHGIRTGWVMHEYRLDESECEPSAFGMQDAYALCRVFKKIVIEAK 163

[Close]

BLAST of CsaV3_1G009440 vs. Swiss-Prot
Match: sp|Q9LVA1|NC101_ARATH (NAC domain-containing protein 101 OS=Arabidopsis thaliana OX=3702 GN=NAC101 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.9e-11
Identity = 63/195 (32.31%), Postives = 92/195 (47.18%), Query Frame = 0


Query: 6   IPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQC-RGV-DNKDI 65
           IP GY F PT+EEL+ YYL +KV        V+  +DLY  EP  I + C RG  + ++ 
Sbjct: 7   IPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGTGEEREW 66

Query: 66  YFFTTLQKK---KSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVK 125
           YFF+   KK    +R  R  GS  G W    + + ++S      L+G  K   + K +  
Sbjct: 67  YFFSHKDKKYPTGTRTNRATGS--GFWKATGRDKAIYSK---QELVGMRKTLVFYKGRAP 126

Query: 126 --EDCTWIMYEYTLNPFIVPEGLVH-DSYVLCMIRKKIV-----KSEKMVMASNKRQASN 185
             +   WIM+EY L       G  H + +V+C   KK +      + + +M S+  Q S 
Sbjct: 127 NGQKSDWIMHEYRLE--TDENGPPHEEGWVVCRAFKKKLTTMNYNNPRTMMGSSSGQES- 186

Query: 186 NNWPMTSMHVDNQNH 188
            NW    M V N N+
Sbjct: 187 -NWFTQQMDVGNGNY 192

[Close]

BLAST of CsaV3_1G009440 vs. TrEMBL
Match: tr|A0A1S3B8F1|A0A1S3B8F1_CUCME (NAC domain-containing protein 105-like OS=Cucumis melo OX=3656 GN=LOC103487127 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.5e-92
Identity = 190/342 (55.56%), Postives = 219/342 (64.04%), Query Frame = 0


Query: 1   MDPSLIPVGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDN 60
           MDPS++P+G+ FCPT+EELLGYYL++KVLGEQA  L LPVIDLY  EPS+IWQ+C GVD 
Sbjct: 1   MDPSMLPLGFTFCPTDEELLGYYLFNKVLGEQAPLLELPVIDLYIHEPSEIWQKCGGVDK 60

Query: 61  KDIYFFTTLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVK 120
           +D+YFFTTL+KKKSRIIRKVGSNG TWS EN+ +QVFSSTID+LLLG++KRF Y+K + K
Sbjct: 61  QDVYFFTTLKKKKSRIIRKVGSNGNTWSCENRARQVFSSTIDHLLLGSVKRFHYQKPKAK 120

Query: 121 E-----DCTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRQASNNNW 180
           +     DCTWIMYEYTL+P IVP+GLVHDSYVLCMIRKKIVKS+K+VM S KRQ S +NW
Sbjct: 121 DCTDINDCTWIMYEYTLDPSIVPKGLVHDSYVLCMIRKKIVKSQKIVMTSKKRQIS-SNW 180

Query: 181 PMTSMHVDNQNHKRMKLQEEAVVD------CIDATIGCP-TTQMTSCFQSLSNVASNEAV 240
           P TSMHVD+Q HK  +L+E  VVD      CIDA I CP TTQM SC Q LSN       
Sbjct: 181 PTTSMHVDDQTHKHRRLEENDVVDLQKEYCCIDAPIECPTTTQMESCNQGLSN------D 240

Query: 241 DDLQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           D L                                                         
Sbjct: 241 DHLIFAKEIEMEIERCNHVELSNVEDGLIMTRLEEKDVVDLQKECCIDVAIGCPIELCRQ 300

Query: 301 XXXXXGYLLFANENENEIEPCNNGELPNVEDGLNYDNEWYFR 331
                  L+FA   ENEIE  NN E  NVEDG NYDNEWYFR
Sbjct: 301 DLSNDDDLIFAKAIENEIERYNNMEQSNVEDGSNYDNEWYFR 335

[Close]

BLAST of CsaV3_1G009440 vs. TrEMBL
Match: tr|A0A0A0LWA5|A0A0A0LWA5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G224380 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 8.4e-54
Identity = 105/209 (50.24%), Postives = 151/209 (72.25%), Query Frame = 0


Query: 8   VGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLYTQEPSQIWQQCRGVDNKDIYFFT 67
           +GY FCPT+EELL YYLY KV+G    P++L V+D+YT+EP QIWQQC GVD +D++FFT
Sbjct: 1   MGYTFCPTDEELLCYYLYHKVVGGFVPPIMLSVVDIYTKEPPQIWQQCGGVDGQDVHFFT 60

Query: 68  TLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQVKE------ 127
            L+KKKSR++RKVG NG TWSGE+K  +VFS   +N L+G  KRF YE  ++K+      
Sbjct: 61  CLKKKKSRVVRKVGPNGATWSGESKATKVFSH--NNTLVGDFKRFHYENPKMKKGGHHNN 120

Query: 128 DCTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRQASNNNWPMTS-- 187
           + +WIMYEYTL+P +VPEG+VH S+VL M+RKKI+K +K   ++ K+ +S  +WP T+  
Sbjct: 121 NYSWIMYEYTLHPNLVPEGVVHHSFVLFMLRKKILKQDKRAFSAIKQTSSCLDWPNTTKA 180

Query: 188 ------MHVDNQNHKRMKLQEEAVVDCID 203
                 +H+D+ N KR +++E+  +D ++
Sbjct: 181 TTTQLEVHIDDLNTKRRRVEEQICIDRVE 207

[Close]

BLAST of CsaV3_1G009440 vs. TrEMBL
Match: tr|A0A0A0L807|A0A0A0L807_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110040 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 9.6e-50
Identity = 103/204 (50.49%), Postives = 143/204 (70.10%), Query Frame = 0


Query: 1   MDPSLIPVGYVFCPTEEELLGYYLYSK--VLGEQASPLVLPVIDLYTQEPSQIWQQCRGV 60
           M+ S++P+GY+FCPT+EELL YYLY K  ++G    P++LPV+D+YT+E SQIWQQCRGV
Sbjct: 1   MNTSMLPMGYIFCPTDEELLCYYLYHKITIVGGFIPPIMLPVVDIYTKESSQIWQQCRGV 60

Query: 61  DNKDIYFFTTLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQ 120
             +D++FF  L+KKKS  +RKVG NG  WSGE+K  +VFS   +N L+G  K F YE  +
Sbjct: 61  HGQDVHFFICLKKKKSCAVRKVGPNGAIWSGESKATKVFSH--NNTLVGAFKLFHYENPK 120

Query: 121 VKED------CTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRQASN 180
           +K+D       +WIMYEYTL+P +VPEG+VH S+VL M+RKKI+K +K   ++ K+  S 
Sbjct: 121 MKKDGHHNNNYSWIMYEYTLHPNLVPEGVVHHSFVLFMLRKKILKQDKRAFSATKQTFSC 180

Query: 181 NNWPMTS--------MHVDNQNHK 189
            +WP T+        +HVD+ N K
Sbjct: 181 IDWPNTTTATTTQLEVHVDDPNTK 202

[Close]

BLAST of CsaV3_1G009440 vs. TrEMBL
Match: tr|A0A1S3CPA2|A0A1S3CPA2_CUCME (NAC domain-containing protein 83-like OS=Cucumis melo OX=3656 GN=LOC103503286 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.4e-23
Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 0


Query: 8   VGYVFCPTEEELLGYYLYSKVLGEQASPLVLPVIDLY-TQEPSQIWQQCRGVDNKDIYFF 67
           VG  F PT+++LL +YLY K+ G+      +   DLY   EP +IWQ  +G+D +D+YFF
Sbjct: 16  VGVKFRPTDQQLL-HYLYCKINGQPYFQGAIFDFDLYGGTEPWEIWQSFKGIDGEDLYFF 75

Query: 68  TTLQKK-------KSRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYEKSQV 127
           T L++         + I RK+G   GTWSGEN    +F++  D  ++G  KRFRYE  QV
Sbjct: 76  TKLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIFANEDDEQIIGYRKRFRYENDQV 135

Query: 128 KE-DCTWIMYEYTLNPFIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRQASNNNWPMT 187
           +E    WIM+EY L+   +    V  +YVLC IRK      K+ +   +     N   MT
Sbjct: 136 EEHHGEWIMHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEI---RELQQPNKKRMT 195

Query: 188 SMHVDNQNHKRMKLQEEAVVD 200
           +  +      + K +E  +VD
Sbjct: 196 APKISPNKRLKTKAKESCLVD 212

[Close]

BLAST of CsaV3_1G009440 vs. TrEMBL
Match: tr|A0A067F1P8|A0A067F1P8_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g045647mg PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.7e-22
Identity = 69/158 (43.67%), Postives = 98/158 (62.03%), Query Frame = 0


Query: 6   IPVGYVFCPTEEELLGYYLYSKVLGEQASPL--VLPVIDLY-TQEPSQIWQQCRGV---- 65
           +P+G  F P++E+L+ +YL++K+ G  A  L   +   +LY  +EP QIW+Q  GV    
Sbjct: 8   LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQF-GVRDLE 67

Query: 66  DNKDIYFFTTLQKKK---SRIIRKVGSNGGTWSGENKPQQVFSSTIDNLLLGTMKRFRYE 125
           D +D+YFFT L+KK    SRI R+VG+  GTW GE+  + V S       +G+ KRFRYE
Sbjct: 68  DGEDLYFFTRLKKKSVNGSRIDRRVGT--GTWQGEDAGKAVVSRN-SRKKIGSKKRFRYE 127

Query: 126 KSQVKEDCTWIMYEYTLNPFIVPEGLVHDSYVLCMIRK 154
           K Q   +C WI++EY+LNP  +P+ L     VLC IRK
Sbjct: 128 KDQSPHNCCWILHEYSLNPLQLPQNLQSSDLVLCRIRK 161

The following BLAST results are available for this feature:

BLAST of CsaV3_1G009440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011660358.1	1.5e-147	99.69	PREDICTED: uncharacterized protein LOC105436381 [Cucumis sativus]	[more]
XP_008443570.1	6.8e-92	55.56	PREDICTED: NAC domain-containing protein 105-like [Cucumis melo]	[more]
KGN65107.1	1.3e-53	50.24	hypothetical protein Csa_1G224380 [Cucumis sativus]	[more]
XP_022934631.1	1.7e-50	55.19	NAC domain-containing protein 12-like [Cucurbita moschata]	[more]
XP_023528741.1	1.7e-50	55.19	transcription factor JUNGBRUNNEN 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_1G009440 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15170.1	4.1e-14	29.94	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT1G54330.1	1.6e-13	30.49	NAC domain containing protein 20	[more]
AT2G24430.1	2.7e-13	28.29	NAC domain containing protein 38	[more]
AT3G10490.2	3.5e-13	32.48	NAC domain containing protein 52	[more]
AT5G46590.1	3.5e-13	31.68	NAC domain containing protein 96	[more]

BLAST of CsaV3_1G009440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FRV4\|NAC54_ARATH	7.4e-13	29.94	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV...	[more]
sp\|Q9SQY0\|NAC52_ARATH	6.2e-12	32.48	NAC domain containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=NAC052 PE=1 ...	[more]
sp\|Q9LS24\|NAC96_ARATH	6.2e-12	31.68	NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 ...	[more]
sp\|Q9FFI5\|NAC86_ARATH	1.8e-11	30.36	NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 ...	[more]
sp\|Q9LVA1\|NC101_ARATH	6.9e-11	32.31	NAC domain-containing protein 101 OS=Arabidopsis thaliana OX=3702 GN=NAC101 PE=2...	[more]

BLAST of CsaV3_1G009440 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B8F1\|A0A1S3B8F1_CUCME	4.5e-92	55.56	NAC domain-containing protein 105-like OS=Cucumis melo OX=3656 GN=LOC103487127 P...	[more]
tr\|A0A0A0LWA5\|A0A0A0LWA5_CUCSA	8.4e-54	50.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G224380 PE=4 SV=1	[more]
tr\|A0A0A0L807\|A0A0A0L807_CUCSA	9.6e-50	50.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110040 PE=4 SV=1	[more]
tr\|A0A1S3CPA2\|A0A1S3CPA2_CUCME	3.4e-23	36.32	NAC domain-containing protein 83-like OS=Cucumis melo OX=3656 GN=LOC103503286 PE...	[more]
tr\|A0A067F1P8\|A0A067F1P8_CITSI	1.7e-22	43.67	Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g045647m...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036093	NAC_dom_sf
IPR003441	NAC-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G009440.1	CsaV3_1G009440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 7..132 e-value: 2.0E-19 score: 70.6
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 6..154 score: 28.059
IPR036093	NAC domain superfamily	GENE3D	G3DSA:3.30.310.150		coord: 15..160 e-value: 2.2E-21 score: 78.3
IPR036093	NAC domain superfamily	SUPERFAMILY	SSF101941	NAC domain	coord: 5..154
None	No IPR available	PANTHER	PTHR31989:SF58	NAC DOMAIN-CONTAINING PROTEIN 101-RELATED	coord: 6..290
None	No IPR available	PANTHER	PTHR31989	FAMILY NOT NAMED	coord: 6..290

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G009440	CSPI01G09320	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G009440	Cucsa.391880	Cucumber (Gy14) v1	cgycucB592
CsaV3_1G009440	CsGy1G009360	Cucumber (Gy14) v2	cgybcucB002

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G009440	Cucumber (Chinese Long) v3	cuccucB003
CsaV3_1G009440	Cucumber (Chinese Long) v3	cuccucB010
CsaV3_1G009440	Silver-seed gourd	carcucB0397
CsaV3_1G009440	Silver-seed gourd	carcucB0529
CsaV3_1G009440	Silver-seed gourd	carcucB1046
CsaV3_1G009440	Cucumber (Gy14) v2	cgybcucB011
CsaV3_1G009440	Cucumber (Gy14) v1	cgycucB237
CsaV3_1G009440	Cucurbita maxima (Rimu)	cmacucB0078
CsaV3_1G009440	Cucurbita maxima (Rimu)	cmacucB0124
CsaV3_1G009440	Cucurbita maxima (Rimu)	cmacucB0235
CsaV3_1G009440	Cucurbita maxima (Rimu)	cmacucB0464
CsaV3_1G009440	Cucurbita moschata (Rifu)	cmocucB0066
CsaV3_1G009440	Cucurbita moschata (Rifu)	cmocucB0110
CsaV3_1G009440	Cucurbita moschata (Rifu)	cmocucB0222
CsaV3_1G009440	Cucurbita moschata (Rifu)	cmocucB0457
CsaV3_1G009440	Cucurbita pepo (Zucchini)	cpecucB0031
CsaV3_1G009440	Cucurbita pepo (Zucchini)	cpecucB0439
CsaV3_1G009440	Cucurbita pepo (Zucchini)	cpecucB0634
CsaV3_1G009440	Cucurbita pepo (Zucchini)	cpecucB0808
CsaV3_1G009440	Wild cucumber (PI 183967)	cpicucB015
CsaV3_1G009440	Bottle gourd (USVL1VR-Ls)	cuclsiB022
CsaV3_1G009440	Bottle gourd (USVL1VR-Ls)	cuclsiB077
CsaV3_1G009440	Melon (DHL92) v3.5.1	cucmeB024
CsaV3_1G009440	Melon (DHL92) v3.5.1	cucmeB051
CsaV3_1G009440	Melon (DHL92) v3.6.1	cucmedB022
CsaV3_1G009440	Melon (DHL92) v3.6.1	cucmedB048
CsaV3_1G009440	Watermelon (Charleston Gray)	cucwcgB038
CsaV3_1G009440	Watermelon (Charleston Gray)	cucwcgB080
CsaV3_1G009440	Watermelon (97103) v1	cucwmB013
CsaV3_1G009440	Watermelon (97103) v1	cucwmB098
CsaV3_1G009440	Watermelon (97103) v2	cucwmbB030
CsaV3_1G009440	Watermelon (97103) v2	cucwmbB071
CsaV3_1G009440	Wax gourd	cucwgoB070