CsaV3_1G008920 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATTTGAACAACAAATTTAAGATTTGAAAAGATTATATATTATTTGAAAAGTTGTTTATGACAAATTTCTCAACCAAAGATCTAAAACTTTACCTATTTAATTAGCACGTGAGTTGTATATATATATTATATAAATGCCACGTGTGTAAAAAATTAAAATAAGTTGTGGGACCCATTGGAGTTGGTAGATTCCATTGGACCACGTAAGCACGCGTTCAAAGGACAATATAGTCTTTTAGGTATTTTTGTTTAAGGGTATTTCCGTCACTCGAATTTTTAACAACTACCCTCACGGCTCACACCTCACCTCACCAGACCATACCAGCTAAATCTCGCCGTATTCATAATTATATATATAACGTAACCCAACTTCTTCTCCCATTCTGTTTCTTCAATTCTTCCCAATTTTCCCTTAACAATTCATTCTTTGTTTTCCTTTTTCTTTTCTCTTCTCTTCTCTTCAATTCTCTCAGGATTCAGGTAATTTGAATTACGAATTTCCCTCCTTCTTTTTTTTCTCTTTCTTCTTCTCCATTCATCCATATCCATGACTTTGATTTCTGTTCATCGTTATTTACACAGCTTTTCCGATTAACCTGGTGTTGATTTTAACCATAATGCCTGACTTCCCTCGTTTTCTTCATCTATTGCTTTTAAATTACTTTTTTCTGCTTTCCAGTTGCCCGTTGAATGGTTTATTGCTGCGCATTAGGAACTTTCATCAGTTCAAACACTTTGGTTATGAACCTACTATCTGATTGATGTCTTTTTTTTTTTTTCTCTTTTTTTTAGGTTTTAGGGTTTTTCACGATATGGGTTCTACTTGTTTTGGTTGTTCTGTTTAGTTATTAGTAGAAAATTTTAGAATGCTTGGGTTATTTATGTCTGATGTTACTGATTGATGGTTGGCCGTTGGGTTGGGGTTTAATTTTGAACCAATGTACAACGTTTTAGTGAATTTAAGGTAGTTGTTTGAATAGCTAGATTGTTTTCATGAAGTGTTGAGGATCCCAGATTCCCGGGTTAATTGAAATATCTGGTACAATATGAACTACTCTTTTCTTTGTCAATGGATTATGAAGATGGAACTTATGTTATATAATATGATATCAACCCTAAATTAGTATTTGGTCTAAAAGAATTTGAATCTAATTAAAAAATGATGGCCCATCTTGAGAGAGAATGTTGAGGATCTCACCTTAATCAAGGGACCTCATAATCTTTATAGGGTTGACTCTTTAGTTGTCAATTAGTTATATGATTGAACCCCATGTTATCTAATATGTAGATGTTGATATATTTTATTAAGTTAACAGAAACTCTTTTGTGCCTACTTTTCCTTGAAAATTAATCCATGAAAAAATGCATCGAAGATTTGATGGCTTTATACGTGGATTTGGTGAATGACTAGGAAGCTTCTAGTTGATAACTCTTTCTTCTTCCGCAAGTGTTACATCTGACAACTTCTATCAGAGAACCTTTGAATATCACACCATAGTACTGATCCAGACTTCTTTTGATCTCTATCTCTAACATTTTGTTTTCACGGTCTTATTTTTACTTTGTGAGAGAAGAGTGTTGACTGTTGAAAAGTTGCTTGGGGAGATTTTCATATAGAAGAATACGTGTATTCCAGAACTTATTGCCCATTTGGTTGCCCGATAGTTTATTTGTTGTTATGCCAATTTTCTAAGCCTTTTTCTTTTATCTTTAAAAATGGATGAAATCCCATTGAGGAAAAGGAAAATACATCTTTTTTTTTTCTATTATTGTTCTTTTATTCATAGCCCCACCTCAAATGAAAAACAAAATCCCACAAAGAGGTAAAAGAAAGAAAGAAAACCTAGATAATGTAGCAGGCTTAAGGGTTTACTGCTTCGGTATCAAAGCAGACTGCCTACTACAACAGCCATGCTCTAAAAAATGCACATGGTGCCTGTTGTTAGATTTGAGATACATAACCAGGGCGTAACATTTTTGTCCAGTGGAAGAGGACCATGGTAATAAATGGAAAGGTTTTCCGTTTATCAATCATTTTCATCTTATTCTACCTATTTTTGCCTTGTTAAGATTTACTTATTAAATGTAGATCTCCATTTGTTAGCGAGACATATTTTTTCTTCTTTTCTATCTTCCAAGAAGTTGACATAGCCGTAGGTAAATGGTTCTTTTGATTGCATGGTGGCCATTTCTCGAATGTGTGAAACCTGCCTTTACAATCTTATCTTATGGCATCTTATTCTTATAGTTCATGTTTTTGTTATAGGATTCAACTGTTTTCTACAACATGGCATCTGCAAATGGGATAGGAAGTATTCAAGGAAAACAGCCTTTATTTTCTTTCGGTGTTATCTCTGATGTTCAATATGCTGATATTCCTGATGGTCGCTCGTTCCTCGGCACTCCTCGTTATTATCGACATAGTATTCTTGTGCTGAAAAGGGCAGTTCAAAGCTGGAACAACCACCAAAAGCTTAAATTTGTCCTTAACTTCGGAGATATTGTTGATGGATTTTGCCCCAAGGACCAATCGTTCAGCACTATTAAGAAAGTAGTTAGTGAATTTGATAATTTTAATGGACGGGTATATCATATGATTGGAAACCACTGCCTTTACAATCTTCCTCGCAAAGAATTACTTCCATTATTGAAGATTCCAAATCATGATGAAGGTCATGCTTATTACGACTTCTCACCTACTCCAAATTTCAGATTCGTCGTACTTGATGGTTACGATATAAGTGCTATTGGCTGGCCTCGGGACCATCCAAAATCAGTGGAGGCCCTTAAAATCTTGTCTCAGAGAAACCCAAATGCAGATAAAAACAGCCCATCAGGATTGGTTGGCTTAGGAAGAAGATACCTTATGTTCAATGGAGGAGTTGGTAAAGAACAATTGAAATGGTTAGATGGTATACTTAAGGAAGCAACACATTTGAAACAAAAAGTGATTGTTTGTTGTCATCTGCCCCTTGATCCTGGGGCAACATCTTTTGCAGCACTTTTATGGAACTACGATGAAGTAATGGACCTGATACACAAATACAATTGTGTCAAAGTTTGCCTGGCTGGACATGATCATAAAGGTGGATATGCAATTGATTCCCATGGAATACATCATAGGGTTCTTGAAGCTGCCCTCGAGTGCCCCCCTGGCACCAACGCATTTGGATATGTCGATGTGTACAATGATGGTTTATATCTTACTGCTACTGACCGGATGAGCAGCTCTAAAATGCTTTTCGATTCGGATCAAACTTGTGACCATGAGAATGGCTGCACTACAGACCCTATAACTTCTACGTAACAACTCATTTCTGATGTATATACTTCATGATCATAAAGTATATAACAATTCGAAAAAGGAAAATTTCGAAAGTTTTAAGTTAGATTCCCTTGAAGAGATGACTGAGGAGCCATTGACAAATGGTTTCGTAATTTTTTATGTCACTAGCAACTACCCCCTTTACAAGGGTTAGTAGTTATGATCACATCCTAATTGTTGGAACTTGCATTTAAATTTGAATTTTTTTTTCAAATCAGGTGTTCATTTTGGATG ATGGCATCTGCAAATGGGATAGGAAGTATTCAAGGAAAACAGCCTTTATTTTCTTTCGGTGTTATCTCTGATGTTCAATATGCTGATATTCCTGATGGTCGCTCGTTCCTCGGCACTCCTCGTTATTATCGACATAGTATTCTTGTGCTGAAAAGGGCAGTTCAAAGCTGGAACAACCACCAAAAGCTTAAATTTGTCCTTAACTTCGGAGATATTGTTGATGGATTTTGCCCCAAGGACCAATCGTTCAGCACTATTAAGAAAGTAGTTAGTGAATTTGATAATTTTAATGGACGGGTATATCATATGATTGGAAACCACTGCCTTTACAATCTTCCTCGCAAAGAATTACTTCCATTATTGAAGATTCCAAATCATGATGAAGGTCATGCTTATTACGACTTCTCACCTACTCCAAATTTCAGATTCGTCGTACTTGATGGTTACGATATAAGTGCTATTGGCTGGCCTCGGGACCATCCAAAATCAGTGGAGGCCCTTAAAATCTTGTCTCAGAGAAACCCAAATGCAGATAAAAACAGCCCATCAGGATTGGTTGGCTTAGGAAGAAGATACCTTATGTTCAATGGAGGAGTTGGTAAAGAACAATTGAAATGGTTAGATGGTATACTTAAGGAAGCAACACATTTGAAACAAAAAGTGATTGTTTGTTGTCATCTGCCCCTTGATCCTGGGGCAACATCTTTTGCAGCACTTTTATGGAACTACGATGAAGTAATGGACCTGATACACAAATACAATTGTGTCAAAGTTTGCCTGGCTGGACATGATCATAAAGGTGGATATGCAATTGATTCCCATGGAATACATCATAGGGTTCTTGAAGCTGCCCTCGAGTGCCCCCCTGGCACCAACGCATTTGGATATGTCGATGTGTACAATGATGGTTTATATCTTACTGCTACTGACCGGATGAGCAGCTCTAAAATGCTTTTCGATTCGGATCAAACTTGTGACCATGAGAATGGCTGCACTACAGACCCTATAACTTCTACGTAA ATGGCATCTGCAAATGGGATAGGAAGTATTCAAGGAAAACAGCCTTTATTTTCTTTCGGTGTTATCTCTGATGTTCAATATGCTGATATTCCTGATGGTCGCTCGTTCCTCGGCACTCCTCGTTATTATCGACATAGTATTCTTGTGCTGAAAAGGGCAGTTCAAAGCTGGAACAACCACCAAAAGCTTAAATTTGTCCTTAACTTCGGAGATATTGTTGATGGATTTTGCCCCAAGGACCAATCGTTCAGCACTATTAAGAAAGTAGTTAGTGAATTTGATAATTTTAATGGACGGGTATATCATATGATTGGAAACCACTGCCTTTACAATCTTCCTCGCAAAGAATTACTTCCATTATTGAAGATTCCAAATCATGATGAAGGTCATGCTTATTACGACTTCTCACCTACTCCAAATTTCAGATTCGTCGTACTTGATGGTTACGATATAAGTGCTATTGGCTGGCCTCGGGACCATCCAAAATCAGTGGAGGCCCTTAAAATCTTGTCTCAGAGAAACCCAAATGCAGATAAAAACAGCCCATCAGGATTGGTTGGCTTAGGAAGAAGATACCTTATGTTCAATGGAGGAGTTGGTAAAGAACAATTGAAATGGTTAGATGGTATACTTAAGGAAGCAACACATTTGAAACAAAAAGTGATTGTTTGTTGTCATCTGCCCCTTGATCCTGGGGCAACATCTTTTGCAGCACTTTTATGGAACTACGATGAAGTAATGGACCTGATACACAAATACAATTGTGTCAAAGTTTGCCTGGCTGGACATGATCATAAAGGTGGATATGCAATTGATTCCCATGGAATACATCATAGGGTTCTTGAAGCTGCCCTCGAGTGCCCCCCTGGCACCAACGCATTTGGATATGTCGATGTGTACAATGATGGTTTATATCTTACTGCTACTGACCGGATGAGCAGCTCTAAAATGCTTTTCGATTCGGATCAAACTTGTGACCATGAGAATGGCTGCACTACAGACCCTATAACTTCTACGTAA MASANGIGSIQGKQPLFSFGVISDVQYADIPDGRSFLGTPRYYRHSILVLKRAVQSWNNHQKLKFVLNFGDIVDGFCPKDQSFSTIKKVVSEFDNFNGRVYHMIGNHCLYNLPRKELLPLLKIPNHDEGHAYYDFSPTPNFRFVVLDGYDISAIGWPRDHPKSVEALKILSQRNPNADKNSPSGLVGLGRRYLMFNGGVGKEQLKWLDGILKEATHLKQKVIVCCHLPLDPGATSFAALLWNYDEVMDLIHKYNCVKVCLAGHDHKGGYAIDSHGIHHRVLEAALECPPGTNAFGYVDVYNDGLYLTATDRMSSSKMLFDSDQTCDHENGCTTDPITST
BLAST of CsaV3_1G008920 vs. NCBI nr
Match: XP_011651823.1 (PREDICTED: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase isoform X2 [Cucumis sativus] >KGN64352.1 hypothetical protein Csa_1G047440 [Cucumis sativus]) HSP 1 Score: 726.1 bits (1873), Expect = 5.6e-206 Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. NCBI nr
Match: XP_004152495.2 (PREDICTED: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase isoform X1 [Cucumis sativus]) HSP 1 Score: 726.1 bits (1873), Expect = 5.6e-206 Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. NCBI nr
Match: XP_008439024.1 (PREDICTED: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase isoform X1 [Cucumis melo]) HSP 1 Score: 703.0 bits (1813), Expect = 5.0e-199 Identity = 328/339 (96.76%), Postives = 332/339 (97.94%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. NCBI nr
Match: XP_008439034.1 (PREDICTED: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase isoform X2 [Cucumis melo]) HSP 1 Score: 703.0 bits (1813), Expect = 5.0e-199 Identity = 328/339 (96.76%), Postives = 332/339 (97.94%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. NCBI nr
Match: XP_022137749.1 (manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [Momordica charantia]) HSP 1 Score: 647.5 bits (1669), Expect = 2.5e-182 Identity = 302/339 (89.09%), Postives = 317/339 (93.51%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. TAIR10
Match: AT4G24730.1 (Calcineurin-like metallo-phosphoesterase superfamily protein) HSP 1 Score: 454.9 bits (1169), Expect = 4.3e-128 Identity = 205/310 (66.13%), Postives = 254/310 (81.94%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. Swiss-Prot
Match: sp|Q9SB68|ADPRM_ARATH (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Arabidopsis thaliana OX=3702 GN=At4g24730 PE=2 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 3.2e-136 Identity = 213/303 (70.30%), Postives = 261/303 (86.14%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. Swiss-Prot
Match: sp|Q8H5F8|ADPRM_ORYSJ (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0688000 PE=2 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 3.9e-134 Identity = 204/320 (63.75%), Postives = 260/320 (81.25%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. Swiss-Prot
Match: sp|Q5M886|ADPRM_RAT (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Rattus norvegicus OX=10116 GN=Adprm PE=1 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 6.1e-63 Identity = 126/317 (39.75%), Postives = 180/317 (56.78%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. Swiss-Prot
Match: sp|Q66JJ3|ADPRM_XENTR (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Xenopus tropicalis OX=8364 GN=adprm PE=2 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.8e-62 Identity = 123/316 (38.92%), Postives = 184/316 (58.23%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. Swiss-Prot
Match: sp|A7YY53|ADPRM_BOVIN (Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Bos taurus OX=9913 GN=ADPRM PE=2 SV=2) HSP 1 Score: 238.4 bits (607), Expect = 1.1e-61 Identity = 123/318 (38.68%), Postives = 179/318 (56.29%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. TrEMBL
Match: tr|A0A0A0LU75|A0A0A0LU75_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G047440 PE=4 SV=1) HSP 1 Score: 726.1 bits (1873), Expect = 3.7e-206 Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. TrEMBL
Match: tr|A0A1S3AXQ9|A0A1S3AXQ9_CUCME (manganese-dependent ADP-ribose/CDP-alcohol diphosphatase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483938 PE=4 SV=1) HSP 1 Score: 703.0 bits (1813), Expect = 3.3e-199 Identity = 328/339 (96.76%), Postives = 332/339 (97.94%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. TrEMBL
Match: tr|A0A1S3AYD9|A0A1S3AYD9_CUCME (manganese-dependent ADP-ribose/CDP-alcohol diphosphatase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483938 PE=4 SV=1) HSP 1 Score: 703.0 bits (1813), Expect = 3.3e-199 Identity = 328/339 (96.76%), Postives = 332/339 (97.94%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. TrEMBL
Match: tr|A0A2P4KZJ1|A0A2P4KZJ1_QUESU (Manganese-dependent adp-ribose/cdp-alcohol diphosphatase OS=Quercus suber OX=58331 GN=CFP56_53166 PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 4.0e-152 Identity = 244/325 (75.08%), Postives = 283/325 (87.08%), Query Frame = 0
BLAST of CsaV3_1G008920 vs. TrEMBL
Match: tr|A0A2N9IWR8|A0A2N9IWR8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56471 PE=4 SV=1) HSP 1 Score: 546.2 bits (1406), Expect = 5.2e-152 Identity = 243/319 (76.18%), Postives = 286/319 (89.66%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |