CsaV3_1G008880 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G008880
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 5533509 .. 5533949 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCACAGGGCAGTGGACAACTTCAGTGGTGAGATTCTCTCCAAAGTCGTCCGCCACAGCCGCAACAAATCCGAATCTTACTCAACCTCCTCCGCCGCCGAGGAGGAGGAGCTCACCAATCCTGCTTCTGCCGTTCAAAAATGGATATCCAACATTCTCAAACCACCCCCCAATCCCGCCATTTCCATCCCCGATCCTCCTCCTTCCACTCCTCGCAAATCTCGATTCCACGCCCATCTTCCACCCTCTCGCCTCCCAAATACTCCCTCAGATGCCCTTCTTTCTCCGCCTAAAACTTTAACTGATCCCCCTCCTCGACGAACGGTTTCATCGCCGGCTTTTTCGCTTCAGACAGTTAGGTCCAAATCCAATCTAAATGGGTTTTCGCAGAACGATTATGGAGATTTGGAATTTGGTCTTAATGGGTTCCTCAAAGAACAGCG

mRNA sequence

ACAGGGCAGTGGACAACTTCAGTGGTGAGATTCTCTCCAAAGTCGTCCGCCACAGCCGCAACAAATCCGAATCTTACTCAACCTCCTCCGCCGCCGAGGAGGAGGAGCTCACCAATCCTGCTTCTGCCGTTCAAAAATGGATATCCAACATTCTCAAACCACCCCCCAATCCCGCCATTTCCATCCCCGATCCTCCTCCTTCCACTCCTCGCAAATCTCGATTCCACGCCCATCTTCCACCCTCTCGCCTCCCAAATACTCCCTCAGATGCCCTTCTTTCTCCGCCTAAAACTTTAA

Coding sequence (CDS)

ACAGGGCAGTGGACAACTTCAGTGGTGAGATTCTCTCCAAAGTCGTCCGCCACAGCCGCAACAAATCCGAATCTTACTCAACCTCCTCCGCCGCCGAGGAGGAGGAGCTCACCAATCCTGCTTCTGCCGTTCAAAAATGGATATCCAACATTCTCAAACCACCCCCCAATCCCGCCATTTCCATCCCCGATCCTCCTCCTTCCACTCCTCGCAAATCTCGATTCCACGCCCATCTTCCACCCTCTCGCCTCCCAAATACTCCCTCAGATGCCCTTCTTTCTCCGCCTAAAACTTTAA

Protein sequence

TGQWTTSVVRFSPKSSATAATNPNLTQPPPPPRRRSSPILLLPFKNGYPTFSNHPPIPPFPSPILLLPLLANLDSTPIFHPLASQILPQMPFFLRLKL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G008880.1CsaV3_1G008880.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G008880Cucumber (Chinese Long) v3cuccucB002
CsaV3_1G008880Cucumber (Chinese Long) v3cuccucB010
CsaV3_1G008880Silver-seed gourdcarcucB0529
CsaV3_1G008880Silver-seed gourdcarcucB0655
CsaV3_1G008880Cucumber (Gy14) v2cgybcucB002
CsaV3_1G008880Cucumber (Gy14) v2cgybcucB009
CsaV3_1G008880Cucumber (Gy14) v1cgycucB109
CsaV3_1G008880Cucumber (Gy14) v1cgycucB316
CsaV3_1G008880Cucumber (Gy14) v1cgycucB595
CsaV3_1G008880Cucurbita maxima (Rimu)cmacucB0074
CsaV3_1G008880Cucurbita maxima (Rimu)cmacucB0121
CsaV3_1G008880Cucurbita maxima (Rimu)cmacucB0186
CsaV3_1G008880Cucurbita maxima (Rimu)cmacucB0464
CsaV3_1G008880Cucurbita maxima (Rimu)cmacucB0484
CsaV3_1G008880Cucurbita moschata (Rifu)cmocucB0061
CsaV3_1G008880Cucurbita moschata (Rifu)cmocucB0105
CsaV3_1G008880Cucurbita moschata (Rifu)cmocucB0457
CsaV3_1G008880Cucurbita pepo (Zucchini)cpecucB0031
CsaV3_1G008880Cucurbita pepo (Zucchini)cpecucB0435
CsaV3_1G008880Cucurbita pepo (Zucchini)cpecucB0801
CsaV3_1G008880Wild cucumber (PI 183967)cpicucB001
CsaV3_1G008880Wild cucumber (PI 183967)cpicucB013
CsaV3_1G008880Wild cucumber (PI 183967)cpicucB074
CsaV3_1G008880Bottle gourd (USVL1VR-Ls)cuclsiB022
CsaV3_1G008880Bottle gourd (USVL1VR-Ls)cuclsiB057
CsaV3_1G008880Bottle gourd (USVL1VR-Ls)cuclsiB075
CsaV3_1G008880Bottle gourd (USVL1VR-Ls)cuclsiB096
CsaV3_1G008880Melon (DHL92) v3.5.1cucmeB024
CsaV3_1G008880Melon (DHL92) v3.5.1cucmeB047
CsaV3_1G008880Melon (DHL92) v3.5.1cucmeB066
CsaV3_1G008880Melon (DHL92) v3.6.1cucmedB022
CsaV3_1G008880Melon (DHL92) v3.6.1cucmedB044
CsaV3_1G008880Melon (DHL92) v3.6.1cucmedB062
CsaV3_1G008880Watermelon (Charleston Gray)cucwcgB038
CsaV3_1G008880Watermelon (Charleston Gray)cucwcgB067
CsaV3_1G008880Watermelon (Charleston Gray)cucwcgB079
CsaV3_1G008880Watermelon (Charleston Gray)cucwcgB102
CsaV3_1G008880Watermelon (97103) v1cucwmB013
CsaV3_1G008880Watermelon (97103) v1cucwmB041
CsaV3_1G008880Watermelon (97103) v2cucwmbB030
CsaV3_1G008880Watermelon (97103) v2cucwmbB068
CsaV3_1G008880Watermelon (97103) v2cucwmbB056
CsaV3_1G008880Watermelon (97103) v2cucwmbB088
CsaV3_1G008880Wax gourdcucwgoB033
CsaV3_1G008880Wax gourdcucwgoB073