CsaV3_1G007720 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G007720
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Description30S ribosomal protein S12-B
Locationchr1 : 4901709 .. 4902150 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGGGAGGAGATTCTCGAACGAGGAAAAGGATCCAATGACTTCGAAAGAATTGAATGAGGAGCCGTATGAGGTGAAAATCTCACGTATGGTTCTGTCGAGTGGCAGTAAGGGTGACTTATCTGTCAACTTTTCCACTATCACCCCCAAAAAACCAAACTCTGCCTTACGTAAAGTTGCCAAAGTACGCTTAACCTCAAGATTTGAAATCACTGCTTATACGTGGTATTTGGCCATAATTTACAAGAACATTCCTTAATATATATTATAATTTGATGCTTTAAAATTAATATTGTAAAAAATACAAAAATTGGGAATGCGGGAAAGTGACAGAGTCCCATTCTTTGAAATGATCAACCATTTTCCAAATATAAGTCCATTTGATAAATAAATTACAAAATAAACATTCAACAGCTTTATCCCATTTATGCAGTTGA

mRNA sequence

ATGGAAGAAGGGAGGAGATTCTCGAACGAGGAAAAGGATCCAATGACTTCGAAAGAATTGAATGAGGAGCCGTATGAGGTGAAAATCTCACGTATGGTTCTGTCGAGTGGCAGTAAGGGTGACTTATCTGTCAACTTTTCCACTATCACCCCCAAAAAACCAAACTCTGCCTTACGTAAAGTTGCCAAAGTACGCTTAACCTCAAGATTTGAAATCACTGCTTATACGTGTTGA

Coding sequence (CDS)

ATGGAAGAAGGGAGGAGATTCTCGAACGAGGAAAAGGATCCAATGACTTCGAAAGAATTGAATGAGGAGCCGTATGAGGTGAAAATCTCACGTATGGTTCTGTCGAGTGGCAGTAAGGGTGACTTATCTGTCAACTTTTCCACTATCACCCCCAAAAAACCAAACTCTGCCTTACGTAAAGTTGCCAAAGTACGCTTAACCTCAAGATTTGAAATCACTGCTTATACGTGTTGA

Protein sequence

MEEGRRFSNEEKDPMTSKELNEEPYEVKISRMVLSSGSKGDLSVNFSTITPKKPNSALRKVAKVRLTSRFEITAYTC
Homology
[Close]
BLAST of CsaV3_1G007720 vs. NCBI nr
Match: KGN64233.1 (30S ribosomal protein S12-B [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 3.9e-30
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 1  MEEGRRFSNEEKDPMTSKELNEEPYEVKISRMVLSSGSKGDLSVNFSTITPKKPNSALRK 60
          MEEGRRFSNEEKDPMTSKELNEEPYEVKISR VLSSGSKGDLSVNFSTITPKKPNSALRK
Sbjct: 1  MEEGRRFSNEEKDPMTSKELNEEPYEVKISRTVLSSGSKGDLSVNFSTITPKKPNSALRK 60

Query: 61 VAKVRLTSRFEITAYT 77
          VA+VRLTS FEITAYT
Sbjct: 61 VARVRLTSGFEITAYT 76

[Close]
BLAST of CsaV3_1G007720 vs. NCBI nr
Match: XP_022932068.1 (uncharacterized protein LOC111438394 [Cucurbita moschata] >XP_023520570.1 uncharacterized protein LOC111783982 [Cucurbita pepo subsp. pepo] >XP_023520572.1 uncharacterized protein LOC111783984 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 0 

Query: 1  MEEGRRFSNEEKDPMTSKELNEEPYEVKISRMVLSSGSKGDLSVNFSTITPKKPNSALRK 60
          MEEGRRFSNEEKDPMTSKELNEEPYEVKIS  VLSSGSKGDLSVNFSTITPKKPNSALRK
Sbjct: 17 MEEGRRFSNEEKDPMTSKELNEEPYEVKISCTVLSSGSKGDLSVNFSTITPKKPNSALRK 76

Query: 61 VAKVRLTSRFEITAY 76
          VA+VRLTS FEITAY
Sbjct: 77 VARVRLTSGFEITAY 91

[Close]
BLAST of CsaV3_1G007720 vs. NCBI nr
Match: PPD74055.1 (hypothetical protein GOBAR_DD29018 [Gossypium barbadense])

HSP 1 Score: 115.9 bits (289), Expect = 6.0e-23
Identity = 63/75 (84.00%), Postives = 65/75 (86.67%), Query Frame = 0 

Query: 1  MEEGRRFSNEEKDPMTSKELNEEPYEVKISRMVLSSGSKGDLSVNFSTITPKKPNSALRK 60
          +EEGRRFSNEEKDPMTSKELNEEPYE         SGSKGDLSVNFSTITPKKPNSALRK
Sbjct: 23 VEEGRRFSNEEKDPMTSKELNEEPYE---------SGSKGDLSVNFSTITPKKPNSALRK 82

Query: 61 VAKVRLTSRFEITAY 76
          VA+VRLTS FEITAY
Sbjct: 83 VARVRLTSGFEITAY 88

[Close]
BLAST of CsaV3_1G007720 vs. NCBI nr
Match: PPD74578.1 (hypothetical protein GOBAR_DD28493 [Gossypium barbadense])

HSP 1 Score: 115.9 bits (289), Expect = 6.0e-23
Identity = 63/75 (84.00%), Postives = 65/75 (86.67%), Query Frame = 0 

Query: 1  MEEGRRFSNEEKDPMTSKELNEEPYEVKISRMVLSSGSKGDLSVNFSTITPKKPNSALRK 60
          +EEGRRFSNEEKDPMTSKELNEEPYE         SGSKGDLSVNFSTITPKKPNSALRK
Sbjct: 23 VEEGRRFSNEEKDPMTSKELNEEPYE---------SGSKGDLSVNFSTITPKKPNSALRK 82

Query: 61 VAKVRLTSRFEITAY 76
          VA+VRLTS FEITAY
Sbjct: 83 VARVRLTSGFEITAY 88

[Close]
BLAST of CsaV3_1G007720 vs. NCBI nr
Match: XP_024929966.1 (uncharacterized protein LOC112488761 [Ziziphus jujuba])

HSP 1 Score: 112.5 bits (280), Expect = 6.7e-22
Identity = 57/75 (76.00%), Postives = 65/75 (86.67%), Query Frame = 0 

Query: 1  MEEGRRFSNEEKDPMTSKELNEEPYEVKISRMVLSSGSKGDLSVNFSTITPKKPNSALRK 60
          +EEG+RFSNEE D MTSKELNEEPYE+KIS MVL +G KGDLS+NFS I PKKPNSAL K
Sbjct: 17 VEEGKRFSNEENDRMTSKELNEEPYEIKISCMVLQNGIKGDLSINFSIIIPKKPNSALSK 76

Query: 61 VAKVRLTSRFEITAY 76
          VA+VRLT RFE+T +
Sbjct: 77 VARVRLTFRFEMTTF 91

[Close]
BLAST of CsaV3_1G007720 vs. TAIR10
Match: ATCG00065.1 (ribosomal protein S12A)

HSP 1 Score: 53.1 bits (126), Expect = 8.7e-08
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 0 

Query: 48 TITPKKPNSALRKVAKVRLTSRFEITAY 76
          TITPKKPNSALRKVA+VRLTS FEITAY
Sbjct: 39 TITPKKPNSALRKVARVRLTSGFEITAY 66

[Close]
BLAST of CsaV3_1G007720 vs. TAIR10
Match: ATCG01230.1 (ribosomal protein S12B)

HSP 1 Score: 53.1 bits (126), Expect = 8.7e-08
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 0 

Query: 48 TITPKKPNSALRKVAKVRLTSRFEITAY 76
          TITPKKPNSALRKVA+VRLTS FEITAY
Sbjct: 39 TITPKKPNSALRKVARVRLTSGFEITAY 66

[Close]
BLAST of CsaV3_1G007720 vs. TAIR10
Match: ATCG00905.1 (ribosomal protein S12C)

HSP 1 Score: 53.1 bits (126), Expect = 8.7e-08
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 0 

Query: 48 TITPKKPNSALRKVAKVRLTSRFEITAY 76
          TITPKKPNSALRKVA+VRLTS FEITAY
Sbjct: 39 TITPKKPNSALRKVARVRLTSGFEITAY 66

[Close]
BLAST of CsaV3_1G007720 vs. TAIR10
Match: AT2G07675.1 (Ribosomal protein S12/S23 family protein)

HSP 1 Score: 41.2 bits (95), Expect = 3.4e-04
Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 0 

Query: 22 EEPYEVKISRMVLSSGSKGDLSVNFSTITPKKPNSALRKVAKVRLTSRFEITAY 76
          EE      +R +     K  +    ST TPKKPNSA RK+AKVRL++R +I A+
Sbjct: 13 EEKRRTDRTRALDKCPQKTGVCPRVSTRTPKKPNSAPRKIAKVRLSNRHDIFAH 66

[Close]
BLAST of CsaV3_1G007720 vs. TAIR10
Match: ATMG00980.1 (Ribosomal protein S12/S23 family protein)

HSP 1 Score: 41.2 bits (95), Expect = 3.4e-04
Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 0 

Query: 22 EEPYEVKISRMVLSSGSKGDLSVNFSTITPKKPNSALRKVAKVRLTSRFEITAY 76
          EE      +R +     K  +    ST TPKKPNSA RK+AKVRL++R +I A+
Sbjct: 13 EEKRRTDRTRALDKCPQKTGVCPRVSTRTPKKPNSAPRKIAKVRLSNRHDIFAH 66

[Close]
BLAST of CsaV3_1G007720 vs. Swiss-Prot
Match: sp|A4GYN8|RR12B_POPTR (30S ribosomal protein S12-B, chloroplastic OS=Populus trichocarpa OX=3694 GN=rps12-B PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.0e-13
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0 

Query: 36 SGSKGDLSVNFSTITPKKPNSALRKVAKVRLTSRFEITAY 76
          SGSKGDLSVNFSTITPKKPNSALRKVA+VRLTS FEITAY
Sbjct: 39 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAY 78

[Close]
BLAST of CsaV3_1G007720 vs. Swiss-Prot
Match: sp|A4QJX7|RR12B_OLIPU (30S ribosomal protein S12-B, chloroplastic OS=Olimarabidopsis pumila OX=74718 GN=rps12-B PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-07
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 0 

Query: 39 KGDLSVNFSTITPKKPNSALRKVAKVRLTSRFEITAY 76
          +G  +  +STITPKKPNSALRKVA+VRLTS FEITAY
Sbjct: 31 RGTCTRVYSTITPKKPNSALRKVARVRLTSGFEITAY 67

[Close]
BLAST of CsaV3_1G007720 vs. Swiss-Prot
Match: sp|Q6RH26|RR12_HELSJ (Plastid 30S ribosomal protein S12 OS=Helicosporidium sp. subsp. Simulium jonesii OX=145475 GN=rps12 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.2e-07
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0 

Query: 35 SSGSKGDLSVNFSTITPKKPNSALRKVAKVRLTSRFEITAY 76
          +S  K  + +   TITPKKPNSALRKVA+VRLTS+ EITAY
Sbjct: 26 NSPQKRGICIRSYTITPKKPNSALRKVARVRLTSKLEITAY 66

[Close]
BLAST of CsaV3_1G007720 vs. Swiss-Prot
Match: sp|A4QJV5|RR12A_OLIPU (30S ribosomal protein S12-A, chloroplastic OS=Olimarabidopsis pumila OX=74718 GN=rps12-A PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.6e-06
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 0 

Query: 48 TITPKKPNSALRKVAKVRLTSRFEITAY 76
          TITPKKPNSALRKVA+VRLTS FEITAY
Sbjct: 39 TITPKKPNSALRKVARVRLTSGFEITAY 66

[Close]
BLAST of CsaV3_1G007720 vs. Swiss-Prot
Match: sp|A4GYT5|RR12A_POPTR (30S ribosomal protein S12-A, chloroplastic OS=Populus trichocarpa OX=3694 GN=rps12-A PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.6e-06
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 0 

Query: 48 TITPKKPNSALRKVAKVRLTSRFEITAY 76
          TITPKKPNSALRKVA+VRLTS FEITAY
Sbjct: 39 TITPKKPNSALRKVARVRLTSGFEITAY 66

[Close]
BLAST of CsaV3_1G007720 vs. TrEMBL
Match: tr|A0A0A0LR16|A0A0A0LR16_CUCSA (30S ribosomal protein S12-B OS=Cucumis sativus OX=3659 GN=Csa_1G044825 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-30
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 1  MEEGRRFSNEEKDPMTSKELNEEPYEVKISRMVLSSGSKGDLSVNFSTITPKKPNSALRK 60
          MEEGRRFSNEEKDPMTSKELNEEPYEVKISR VLSSGSKGDLSVNFSTITPKKPNSALRK
Sbjct: 1  MEEGRRFSNEEKDPMTSKELNEEPYEVKISRTVLSSGSKGDLSVNFSTITPKKPNSALRK 60

Query: 61 VAKVRLTSRFEITAYT 77
          VA+VRLTS FEITAYT
Sbjct: 61 VARVRLTSGFEITAYT 76

[Close]
BLAST of CsaV3_1G007720 vs. TrEMBL
Match: tr|A0A2P5QHR4|A0A2P5QHR4_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD29018 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.0e-23
Identity = 63/75 (84.00%), Postives = 65/75 (86.67%), Query Frame = 0 

Query: 1  MEEGRRFSNEEKDPMTSKELNEEPYEVKISRMVLSSGSKGDLSVNFSTITPKKPNSALRK 60
          +EEGRRFSNEEKDPMTSKELNEEPYE         SGSKGDLSVNFSTITPKKPNSALRK
Sbjct: 23 VEEGRRFSNEEKDPMTSKELNEEPYE---------SGSKGDLSVNFSTITPKKPNSALRK 82

Query: 61 VAKVRLTSRFEITAY 76
          VA+VRLTS FEITAY
Sbjct: 83 VARVRLTSGFEITAY 88

[Close]
BLAST of CsaV3_1G007720 vs. TrEMBL
Match: tr|A0A2P5QJ53|A0A2P5QJ53_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD28493 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.0e-23
Identity = 63/75 (84.00%), Postives = 65/75 (86.67%), Query Frame = 0 

Query: 1  MEEGRRFSNEEKDPMTSKELNEEPYEVKISRMVLSSGSKGDLSVNFSTITPKKPNSALRK 60
          +EEGRRFSNEEKDPMTSKELNEEPYE         SGSKGDLSVNFSTITPKKPNSALRK
Sbjct: 23 VEEGRRFSNEEKDPMTSKELNEEPYE---------SGSKGDLSVNFSTITPKKPNSALRK 82

Query: 61 VAKVRLTSRFEITAY 76
          VA+VRLTS FEITAY
Sbjct: 83 VARVRLTSGFEITAY 88

[Close]
BLAST of CsaV3_1G007720 vs. TrEMBL
Match: tr|U5CU38|U5CU38_AMBTC (Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s02071p00004290 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.9e-21
Identity = 60/75 (80.00%), Postives = 64/75 (85.33%), Query Frame = 0 

Query: 1  MEEGRRFSNEEKDPMTSKELNEEPYEVKISRMVLSSGSKGDLSVNFSTITPKKPNSALRK 60
          +EEGRRFS+EEKDP+TSKELNEEPYE         S SKGDLSVNFSTITPKKPNSALRK
Sbjct: 23 VEEGRRFSSEEKDPITSKELNEEPYE---------SDSKGDLSVNFSTITPKKPNSALRK 82

Query: 61 VAKVRLTSRFEITAY 76
          VA+VRLTS FEITAY
Sbjct: 83 VARVRLTSGFEITAY 88

[Close]
BLAST of CsaV3_1G007720 vs. TrEMBL
Match: tr|A0A0D2V211|A0A0D2V211_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_012G049000 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-20
Identity = 59/75 (78.67%), Postives = 62/75 (82.67%), Query Frame = 0 

Query: 1  MEEGRRFSNEEKDPMTSKELNEEPYEVKISRMVLSSGSKGDLSVNFSTITPKKPNSALRK 60
          +EEGRRFSNEEK+PMTSKELNEE YE         SGSKGDLSVNF TITPKKPNSALRK
Sbjct: 6  VEEGRRFSNEEKNPMTSKELNEESYE---------SGSKGDLSVNFFTITPKKPNSALRK 65

Query: 61 VAKVRLTSRFEITAY 76
          +AKVRLT  FEITAY
Sbjct: 66 IAKVRLTYAFEITAY 71

The following BLAST results are available for this feature:
BLAST of CsaV3_1G007720 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64233.13.9e-3096.0530S ribosomal protein S12-B [Cucumis sativus][more]
XP_022932068.11.3e-2894.67uncharacterized protein LOC111438394 [Cucurbita moschata] >XP_023520570.1 unchar... [more]
PPD74055.16.0e-2384.00hypothetical protein GOBAR_DD29018 [Gossypium barbadense][more]
PPD74578.16.0e-2384.00hypothetical protein GOBAR_DD28493 [Gossypium barbadense][more]
XP_024929966.16.7e-2276.00uncharacterized protein LOC112488761 [Ziziphus jujuba][more]
BLAST of CsaV3_1G007720 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00065.18.7e-0892.86ribosomal protein S12A[more]
ATCG01230.18.7e-0892.86ribosomal protein S12B[more]
ATCG00905.18.7e-0892.86ribosomal protein S12C[more]
AT2G07675.13.4e-0444.44Ribosomal protein S12/S23 family protein[more]
ATMG00980.13.4e-0444.44Ribosomal protein S12/S23 family protein[more]
BLAST of CsaV3_1G007720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A4GYN8|RR12B_POPTR3.0e-1395.0030S ribosomal protein S12-B, chloroplastic OS=Populus trichocarpa OX=3694 GN=rps... [more]
sp|A4QJX7|RR12B_OLIPU1.9e-0775.6830S ribosomal protein S12-B, chloroplastic OS=Olimarabidopsis pumila OX=74718 GN... [more]
sp|Q6RH26|RR12_HELSJ9.2e-0765.85Plastid 30S ribosomal protein S12 OS=Helicosporidium sp. subsp. Simulium jonesii... [more]
sp|A4QJV5|RR12A_OLIPU1.6e-0692.8630S ribosomal protein S12-A, chloroplastic OS=Olimarabidopsis pumila OX=74718 GN... [more]
sp|A4GYT5|RR12A_POPTR1.6e-0692.8630S ribosomal protein S12-A, chloroplastic OS=Populus trichocarpa OX=3694 GN=rps... [more]
BLAST of CsaV3_1G007720 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LR16|A0A0A0LR16_CUCSA2.6e-3096.0530S ribosomal protein S12-B OS=Cucumis sativus OX=3659 GN=Csa_1G044825 PE=4 SV=1[more]
tr|A0A2P5QHR4|A0A2P5QHR4_GOSBA4.0e-2384.00Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD29018 PE=3 SV... [more]
tr|A0A2P5QJ53|A0A2P5QJ53_GOSBA4.0e-2384.00Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD28493 PE=3 SV... [more]
tr|U5CU38|U5CU38_AMBTC2.9e-2180.00Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s02071p00004290... [more]
tr|A0A0D2V211|A0A0D2V211_GOSRA1.4e-2078.67Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_012G0... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR006032Ribosomal_S12/S23
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G007720.1CsaV3_1G007720.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006032Ribosomal protein S12/S23PRINTSPR01034RIBOSOMALS12coord: 51..66
score: 90.1
coord: 67..77
score: 24.51
coord: 36..51
score: 24.57
IPR006032Ribosomal protein S12/S23PFAMPF00164Ribosom_S12_S23coord: 42..76
e-value: 5.3E-11
score: 42.0
IPR006032Ribosomal protein S12/S23PROSITEPS00055RIBOSOMAL_S12coord: 52..59
NoneNo IPR availableGENE3DG3DSA:2.40.50.140coord: 8..77
e-value: 3.2E-12
score: 48.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILYSSF50249Nucleic acid-binding proteinscoord: 43..76

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G007720Silver-seed gourdcarcucB0529
CsaV3_1G007720Silver-seed gourdcarcucB1048
CsaV3_1G007720Cucumber (Gy14) v2cgybcucB002
CsaV3_1G007720Cucumber (Gy14) v1cgycucB109
CsaV3_1G007720Cucurbita maxima (Rimu)cmacucB0248
CsaV3_1G007720Cucurbita maxima (Rimu)cmacucB0464
CsaV3_1G007720Cucurbita moschata (Rifu)cmocucB0234
CsaV3_1G007720Cucurbita moschata (Rifu)cmocucB0457
CsaV3_1G007720Cucurbita pepo (Zucchini)cpecucB0031
CsaV3_1G007720Cucurbita pepo (Zucchini)cpecucB0623
CsaV3_1G007720Wild cucumber (PI 183967)cpicucB001
CsaV3_1G007720Bottle gourd (USVL1VR-Ls)cuclsiB022
CsaV3_1G007720Melon (DHL92) v3.5.1cucmeB024
CsaV3_1G007720Melon (DHL92) v3.6.1cucmedB022
CsaV3_1G007720Watermelon (Charleston Gray)cucwcgB023
CsaV3_1G007720Watermelon (97103) v1cucwmB048
CsaV3_1G007720Watermelon (97103) v2cucwmbB009
CsaV3_1G007720Wax gourdcucwgoB031