CsaV3_1G007200 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G007200
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Down syndrome critical region protein 3 like
Location	chr1 : 4565305 .. 4568963 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGTTGGATGGGGAAGTTTAAGCCCAACTTGAAATTAATCTCTCCAACTAACAAAAATGATATAAAAGTATTGATTGGTTAATGACAAAATAATTTAAGAAATAGTCTAAGAAGTTGAAATAATTAACTAAGCTATGTTGGGATTGACACATAAAGTTTTGTGCAAATTCGTTATTATGGTAAATGTTGGGGGTAATCTAGCGAATTAATATTAAGTAGAAGGGTCAACTAGCAAACCCATATAATAGTTTTCCCTTAAGCGATCGTCTTCTTCACTTGGCGCTGGCGGTGTTTGCTTTCGGGAGTTGCAATGCCGGTGGTAGAGCTCAAGCTTTCTCGAACTAATCGTATCTACCGGCCTTCTGTAAGAATTCTCTTTCAATCTTCATCTCTTTCATCTTCATTCAACTAATCCATTACTATCGCTCTTACGATGTTGTTCAGGAACATCTTCAAGGCCAAATCATTGTCAATTCTCGCTCCTCGATTTCCCATTCTGGAATTCGCCTTGCTCTCAATGGATCCGTCAATTTGCAGGTATTAGAAAGAAGCACTTGTTGAGTGACAGAATCATGGAGGATTATTGCTTTTCATGTAATCGTAACTTTATTCTCTTTCTTCATCCATTGGATGCATTTCATGGGGGAAAAGGTTCGTGGAGGATCTGCAGGTGTTATTGAGTCGGTTTACGGTGTTATCAAGCCTATTTCGATAGTGTGAGTTGGCTTTTTTTACGTTGTTTTAAGTGAATTCTGGATTCTTTAGGTGTACTAGTATACGAAAGTCATGTAATATTTGAATTTGATTGCAAATTTGTTCCAATTTTTGAAGACGATAGCAATCTCTATATCGATTACATAATTTCAGATGACATTATAAGCAATACTATATGAAATCATTTAGGATATGGTTAGGTATTGAGGAATTTAGTGCTTCCACTAGTGTTCCGACCTGAAATTTATATTGGAAATGGTTATTGCATCATTTTTTTATTTTACTTATCCAACGGTTATACTTTATCTTGCTCTTCAATTGATTTTGTTTCCTCCACTCTCATAATAATAGGAATAGGAGCATTTTGGTTAGCCCATCTGGAAAGCTTGCTTCAGGTACAAACGAGGTAAATTAGCTGTTGAGAGCTATGAAATCTCGACATTGTTACATGAATCAATGTTTGATATGTTTATTCTCTTATGGTTGAGTTCAATTTGGACAAATATTTAATTTTTGTTGCATAATTGCATGTGATGTTTATTGTTATTATGTATGGTTATACTTGTACCCTCACAGCATATCTTCTTGACCCTCACATCCTCTTACAAATGGTCTATATACCGTACCGATAGATGTTCGCTTATTTGTTGCCTGCACTTTCAGTTTTCAGATAGTCAACTGAATGAATTCTCTCAAAATCTTTCCAGATTCCATTTTCCGTAATCCTGAGACAGCCAAACGAAAACTTGGGAAAATATTACGAGACTTTTCATGGAACTGACATTAACATTCAGGTGAGTGTTGTGAATCTTTTTATTTTGCTTCAGACTATGAGAATGCTAAATGGCATGGTTTTCACTATTATTCACTTCCCGCTCCAAAAAGAAATGAGATTTCTCATAACACGAACCTGATATTTGTCAATTACTGAATAATATGATAGTATTTAGTAACTGTAGATATAAGCAGAGGGTACCTACACAAGTCATTATCTGCCACGATGGAGTTTATAGTTGAAAGTGATACAGGTATGCTTTAGTTGACCCTTCACTGTTATGTATTTAACTCAAATATATGAAATTAAAATTTCCTTTTGTTCTGTACCAGCTGATTTCCTTGAGCGGCCGCTGTCCTCTGAGATGGTCATCTTTTACATCACTCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAGATCAGGTATTTTCATTATTATTGTTGCTTTTCTTTCATGTTTTATGCTTTTATCAGGTGTGATTTTATTTTATTTTATTTTCACATAGGAATATTTGCATACAAGCCAAAGAACAATTACTACTTTAGTTTTTGTACTTTTACGTATCCTTTTGCTGATGGGGGTACTTCTTTATAGGTGGCTTTCGAGTTACTGGGAAAATGTCAACTCTGTGCTCTCTTTCAGACCCCCTCACTGGTGAATTAATCGTTGAAACATCTGCAGTCCCCATTAATTCAATTGACATTCACTTGTGTCGCGTCGAATCTGTTATTCTTGGAGAGAGAATCATAACTGAAACATCTGTGATCCAAACTACCCAAGTATGTGCCATCACATCTTCTCAGCATACATTAGTTTTTGGCCGAACAAAGTTTCGTATAAAATTCTGATTTTATTTCTTGTTTTTCACTAGATAGCAGACGGAGATGTATGTCGCAACATTACTCTGCCTATTTATGTTATACTACCCCGCCTTTTGACTTGCCCAACAGTCTTTGCTGGGTGAGTTGCAAATACTATAACTCTTCAACCCTTTTTTTGTCTTTTTCTTTTCAATAACAAGGAATTCGGGGAGATTTGAACCTTCCACTTAAAAAAAAAAAGGAGTAGATGCTTCTGAATGAAGCTCTTCATGATGGCTTCACCCATTGGATGGGGATATTTAAAGTATTGGTATTAAATTCGGAGTTTAGTTCAGCATTCTGTTGAAATCGTTTAATATTATGTCAAACTATCGTGGGTTGACCTAGTGGTAAAAAAAGAGACAAAGTCTTAATAAATGGAAAAGAGATCATGGTTTCAATTCATGATGACCACCTACTTAGGATCAAATTTCCTATAAGTTTTCTTGACACTCGAATGTTGCAAGGTTATGTGAGTTGTCTTAGAAGATCGTAAGTTGGTCTAGATTGTAAAAAGAAGATATTATGTCGAATAATTTTATTTGGTTGATGATTGGAAACAACTTGTTCCCCTTCTAAGTTCTCTCTCTATGGTTGGTATCAGATCTTGTTGAAAGTGTGGTTTATATTTGACTAATAACTTGTCCTAATCGTTTATGACAGTCCATTTTCAATTGAATTTAAAGTCTACATCGTTATAACCTTTCAATCAGAGCTATCAAAGTTACATCCCAAGACTGATCCAAGAACTCCAAGGCTATGGGTGAGCATCTCTTGGACTTTCTCTTGTTGTCTTGTTTAACTAATCTAACATGCTCTCTTGTTCTCAACTCTAGCTTGCAATTGAATCTCTACCCATGGAGCTTCTTCGATGTCGGTCAGACGATTAGATCAACGAATCCTTATATTGTCATTTGTGTCTGTTGGATGATGTAAATTTTAAAAAGCAGCAGGTGAAGAAAATCATGCTAAAGACCAAGTGTTGTGTACTCATTTGTACTAATGTTATGGGGATTTTTTTGTTCTGCATAAAGTATCGAACTCCCGATTTACACTAGTAATTTGTAATATTAGTAGTGCGAACACTAGTCATTTGTAATATTAGTAGTGCGAACACTAGTCATTTGTAATATTGGTAGACTTTGTACGTATGTTAGCAACTTCTACATGTTGATGTGTCAAGCCAAACAATAGATGATTGTAGTATTGATTTTTCTAGTCGTGTATTGATTTTTCTCCCTCAAATATGCAAATCGTTTAGTGAATGTTTTTTCCCGTCCTACAATAAATGTCATTAGGAC

mRNA sequence

ATGCCGGTGGTAGAGCTCAAGCTTTCTCGAACTAATCGTATCTACCGGCCTTCTGAACATCTTCAAGGCCAAATCATTGTCAATTCTCGCTCCTCGATTTCCCATTCTGGAATTCGCCTTGCTCTCAATGGATCCGTCAATTTGCAGGTTCGTGGAGGATCTGCAGGTGTTATTGAGTCGGTTTACGGTGTTATCAAGCCTATTTCGATAGTGAATAGGAGCATTTTGGTTAGCCCATCTGGAAAGCTTGCTTCAGGTACAAACGAGATTCCATTTTCCGTAATCCTGAGACAGCCAAACGAAAACTTGGGAAAATATTACGAGACTTTTCATGGAACTGACATTAACATTCAGTATTTAGTAACTGTAGATATAAGCAGAGGGTACCTACACAAGTCATTATCTGCCACGATGGAGTTTATAGTTGAAAGTGATACAGCTGATTTCCTTGAGCGGCCGCTGTCCTCTGAGATGGTCATCTTTTACATCACTCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAGATCAGGTGGCTTTCGAGTTACTGGGAAAATGTCAACTCTGTGCTCTCTTTCAGACCCCCTCACTGGTGAATTAATCGTTGAAACATCTGCAGTCCCCATTAATTCAATTGACATTCACTTGTGTCGCGTCGAATCTGTTATTCTTGGAGAGAGAATCATAACTGAAACATCTGTGATCCAAACTACCCAAATAGCAGACGGAGATGTATGTCGCAACATTACTCTGCCTATTTATGTTATACTACCCCGCCTTTTGACTTGCCCAACAGTCTTTGCTGGTCCATTTTCAATTGAATTTAAAGTCTACATCGTTATAACCTTTCAATCAGAGCTATCAAAGTTACATCCCAAGACTGATCCAAGAACTCCAAGGCTATGGCTTGCAATTGAATCTCTACCCATGGAGCTTCTTCGATGTCGGTCAGACGATTAG

Coding sequence (CDS)

ATGCCGGTGGTAGAGCTCAAGCTTTCTCGAACTAATCGTATCTACCGGCCTTCTGAACATCTTCAAGGCCAAATCATTGTCAATTCTCGCTCCTCGATTTCCCATTCTGGAATTCGCCTTGCTCTCAATGGATCCGTCAATTTGCAGGTTCGTGGAGGATCTGCAGGTGTTATTGAGTCGGTTTACGGTGTTATCAAGCCTATTTCGATAGTGAATAGGAGCATTTTGGTTAGCCCATCTGGAAAGCTTGCTTCAGGTACAAACGAGATTCCATTTTCCGTAATCCTGAGACAGCCAAACGAAAACTTGGGAAAATATTACGAGACTTTTCATGGAACTGACATTAACATTCAGTATTTAGTAACTGTAGATATAAGCAGAGGGTACCTACACAAGTCATTATCTGCCACGATGGAGTTTATAGTTGAAAGTGATACAGCTGATTTCCTTGAGCGGCCGCTGTCCTCTGAGATGGTCATCTTTTACATCACTCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAGATCAGGTGGCTTTCGAGTTACTGGGAAAATGTCAACTCTGTGCTCTCTTTCAGACCCCCTCACTGGTGAATTAATCGTTGAAACATCTGCAGTCCCCATTAATTCAATTGACATTCACTTGTGTCGCGTCGAATCTGTTATTCTTGGAGAGAGAATCATAACTGAAACATCTGTGATCCAAACTACCCAAATAGCAGACGGAGATGTATGTCGCAACATTACTCTGCCTATTTATGTTATACTACCCCGCCTTTTGACTTGCCCAACAGTCTTTGCTGGTCCATTTTCAATTGAATTTAAAGTCTACATCGTTATAACCTTTCAATCAGAGCTATCAAAGTTACATCCCAAGACTGATCCAAGAACTCCAAGGCTATGGCTTGCAATTGAATCTCTACCCATGGAGCTTCTTCGATGTCGGTCAGACGATTAG

Protein sequence

MPVVELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVYGVIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYLVTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGGFRVTGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPRLWLAIESLPMELLRCRSDD

Homology

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BLAST of CsaV3_1G007200 vs. NCBI nr
Match: XP_004137506.1 (PREDICTED: Down syndrome critical region protein 3 homolog isoform X1 [Cucumis sativus] >KGN64179.1 hypothetical protein Csa_1G042860 [Cucumis sativus])

HSP 1 Score: 625.2 bits (1611), Expect = 1.3e-175
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MPVVELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIES 60
           MPVVELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIES
Sbjct: 1   MPVVELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIES 60

Query: 61  VYGVIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYL 120
           VYGVIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYL
Sbjct: 61  VYGVIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYL 120

Query: 121 VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG 180
           VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG
Sbjct: 121 VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG 180

Query: 181 FRVTGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQ 240
           FRVTGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQ
Sbjct: 181 FRVTGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQ 240

Query: 241 IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP 300
           IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP
Sbjct: 241 IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP 300

Query: 301 RLWLAIESLPMELLRCRSDD 321
           RLWLAIESLPMELLRCRSDD
Sbjct: 301 RLWLAIESLPMELLRCRSDD 320

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BLAST of CsaV3_1G007200 vs. NCBI nr
Match: XP_008464938.1 (PREDICTED: Down syndrome critical region protein 3 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 609.4 bits (1570), Expect = 7.2e-171
Identity = 311/320 (97.19%), Postives = 316/320 (98.75%), Query Frame = 0


Query: 1   MPVVELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIES 60
           MPVVELKLSRTNRIYRP EHLQGQIIVNSRSSISHSGIR+ALNGSVNLQVRGGSAGVIES
Sbjct: 1   MPVVELKLSRTNRIYRPCEHLQGQIIVNSRSSISHSGIRIALNGSVNLQVRGGSAGVIES 60

Query: 61  VYGVIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYL 120
           VYGVIKPI IVNRSILV PSGKLASGTNEIPFSVILRQP+ENLGK+YETFHGTDINIQYL
Sbjct: 61  VYGVIKPILIVNRSILVRPSGKLASGTNEIPFSVILRQPSENLGKFYETFHGTDINIQYL 120

Query: 121 VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG 180
           VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG
Sbjct: 121 VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG 180

Query: 181 FRVTGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQ 240
           FRVTGKMSTLCSLSDP+TGELIVETSAV INSIDIHLCRVESVILGERIITETSVIQTTQ
Sbjct: 181 FRVTGKMSTLCSLSDPITGELIVETSAVLINSIDIHLCRVESVILGERIITETSVIQTTQ 240

Query: 241 IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP 300
           IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP
Sbjct: 241 IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP 300

Query: 301 RLWLAIESLPMELLRCRSDD 321
           RLWLAIESLPMEL+RCRSDD
Sbjct: 301 RLWLAIESLPMELIRCRSDD 320

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BLAST of CsaV3_1G007200 vs. NCBI nr
Match: XP_022924207.1 (Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita moschata] >XP_023520407.1 Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 581.6 bits (1498), Expect = 1.6e-162
Identity = 295/317 (93.06%), Postives = 306/317 (96.53%), Query Frame = 0


Query: 4   VELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVYG 63
           VE++LSRTNRIYRPSEHLQGQIIVNSRSSISH GI L LNGSVNLQVRGGSAGVIESVYG
Sbjct: 3   VEIRLSRTNRIYRPSEHLQGQIIVNSRSSISHYGISLLLNGSVNLQVRGGSAGVIESVYG 62

Query: 64  VIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYLVTV 123
           VIKP+SIVNRSI V PSGKL SGT EIPFSVILRQP+ENLGK+YETFHGTDINIQYLVTV
Sbjct: 63  VIKPLSIVNRSIEVRPSGKLPSGTTEIPFSVILRQPSENLGKFYETFHGTDINIQYLVTV 122

Query: 124 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGGFRV 183
            ISRGYLHKSLSAT+EFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPEL+SGGFRV
Sbjct: 123 GISRGYLHKSLSATIEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGFRV 182

Query: 184 TGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIAD 243
           TGKM+TLCSLSDP+TGEL VE SAVPI+SIDIHLCRVESVILGERIITETSVIQTTQIAD
Sbjct: 183 TGKMATLCSLSDPITGELTVEASAVPISSIDIHLCRVESVILGERIITETSVIQTTQIAD 242

Query: 244 GDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPRLW 303
           GDVCRNITLPIY ILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPRLW
Sbjct: 243 GDVCRNITLPIYAILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPRLW 302

Query: 304 LAIESLPMELLRCRSDD 321
           LAIESLP+ELLRCRSDD
Sbjct: 303 LAIESLPLELLRCRSDD 319

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BLAST of CsaV3_1G007200 vs. NCBI nr
Match: XP_023001800.1 (Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 577.4 bits (1487), Expect = 3.0e-161
Identity = 293/317 (92.43%), Postives = 304/317 (95.90%), Query Frame = 0


Query: 4   VELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVYG 63
           VE++LSRTNRIYRPSEHLQGQIIVNSRSSISH GI L LNGSVNLQVRGGSAGVIESVYG
Sbjct: 3   VEIRLSRTNRIYRPSEHLQGQIIVNSRSSISHYGISLLLNGSVNLQVRGGSAGVIESVYG 62

Query: 64  VIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYLVTV 123
           VIKPISIVNRSI V PSGKL SGT EIPFSVILRQP+ENLGK+YETFHGTDINIQYLVTV
Sbjct: 63  VIKPISIVNRSIEVRPSGKLPSGTTEIPFSVILRQPDENLGKFYETFHGTDINIQYLVTV 122

Query: 124 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGGFRV 183
            ISRGYLHKSLSAT+EFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPEL+SGGFRV
Sbjct: 123 GISRGYLHKSLSATIEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGFRV 182

Query: 184 TGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIAD 243
           TGKM+TLCSLSDP+TGEL VE SAVPI+SIDIHLCRVESVILGERIITETSVIQTTQIAD
Sbjct: 183 TGKMATLCSLSDPITGELTVEASAVPISSIDIHLCRVESVILGERIITETSVIQTTQIAD 242

Query: 244 GDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPRLW 303
           GDVCRNI LPIY ILPRLLTCPTVFAGPFSIEFKVY VITFQSELSK+HPKTDPRTPRLW
Sbjct: 243 GDVCRNIALPIYAILPRLLTCPTVFAGPFSIEFKVYTVITFQSELSKVHPKTDPRTPRLW 302

Query: 304 LAIESLPMELLRCRSDD 321
           LAIESLP+ELLRCRSDD
Sbjct: 303 LAIESLPLELLRCRSDD 319

[Close]

BLAST of CsaV3_1G007200 vs. NCBI nr
Match: XP_022137704.1 (Down syndrome critical region protein 3 homolog isoform X1 [Momordica charantia])

HSP 1 Score: 567.0 bits (1460), Expect = 4.1e-158
Identity = 288/317 (90.85%), Postives = 303/317 (95.58%), Query Frame = 0


Query: 4   VELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVYG 63
           VEL+LSRTNRIYRPSEHLQGQIIVNS SSISHSGIRLA+NGSVNLQ+RGGSAGVIESVYG
Sbjct: 3   VELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESVYG 62

Query: 64  VIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYLVTV 123
           VIKP  IVN+SI V PSGKLASGT EIPFS+ILRQP+E LG++YETFHGT+INIQYLVTV
Sbjct: 63  VIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLVTV 122

Query: 124 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGGFRV 183
           DISRGYLHKSLSAT+EFIVESDTAD LERPLSSEMVIFYITQDTQRHPLLPEL+SGGFRV
Sbjct: 123 DISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGFRV 182

Query: 184 TGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIAD 243
           TGKMSTLCSLSDP+TGEL VE SAVPINSIDIHLCRVESVILGERIITETSVIQ+TQIAD
Sbjct: 183 TGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIAD 242

Query: 244 GDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPRLW 303
           GDVCRNITLPIYVI PRLLTCPTVFAGPFSIEFKVYIVITFQS LSKLH KTDPRTPRLW
Sbjct: 243 GDVCRNITLPIYVIPPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLW 302

Query: 304 LAIESLPMELLRCRSDD 321
           LAIESLP+EL+R RSDD
Sbjct: 303 LAIESLPLELVRSRSDD 319

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BLAST of CsaV3_1G007200 vs. TAIR10
Match: AT1G48550.1 (Vacuolar protein sorting-associated protein 26)

HSP 1 Score: 451.8 bits (1161), Expect = 3.5e-127
Identity = 221/317 (69.72%), Postives = 270/317 (85.17%), Query Frame = 0


Query: 4   VELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVYG 63
           V +KLSR+NRIYR SE ++G+I++ S +SISH  IRL++NGSVNLQVRGGSAGVIES YG
Sbjct: 7   VNVKLSRSNRIYRSSEPVEGKIVIKSATSISHQAIRLSVNGSVNLQVRGGSAGVIESFYG 66

Query: 64  VIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENL-GKYYETFHGTDINIQYLVT 123
           VIKPI IV ++I V  SGK+  GT EIPFS+ LR+P E +  K+YETFHGT+INIQYL+T
Sbjct: 67  VIKPIQIVKKTIEVKSSGKIPPGTTEIPFSLNLREPGEGIVEKFYETFHGTNINIQYLLT 126

Query: 124 VDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGGFR 183
            DI RGYLHK LSATMEFI+ES   D  ERP+  E+VIFYITQDTQRHPLLP++++GGFR
Sbjct: 127 ADIPRGYLHKPLSATMEFIIESGRVDLPERPIPPEIVIFYITQDTQRHPLLPDIKTGGFR 186

Query: 184 VTGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIA 243
           VTGK++T CSL DPL+GEL VE S+VPI SIDIHL RVES+I+GERI+TETS+IQ+TQIA
Sbjct: 187 VTGKLATQCSLQDPLSGELTVEASSVPITSIDIHLLRVESIIVGERIVTETSLIQSTQIA 246

Query: 244 DGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPRL 303
           DGDVCRN+TLPIYV+LPRLL CP+VFAGPFS+EFKV I I+F+S+L+K  PK+DP  PRL
Sbjct: 247 DGDVCRNMTLPIYVLLPRLLMCPSVFAGPFSVEFKVCITISFKSKLAKAQPKSDPTAPRL 306

Query: 304 WLAIESLPMELLRCRSD 320
           W+A+E LP+EL+R + D
Sbjct: 307 WMALERLPLELVRTKRD 323

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BLAST of CsaV3_1G007200 vs. Swiss-Prot
Match: sp|Q5RF33|DSCR3_PONAB (Down syndrome critical region protein 3 homolog OS=Pongo abelii OX=9601 GN=DSCR3 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.0e-51
Identity = 122/317 (38.49%), Postives = 177/317 (55.84%), Query Frame = 0


Query: 4   VELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVYG 63
           +++K+ R N++Y   E L G ++++S+ S+ H G+ L + G+VNLQ+   S GV E+ Y 
Sbjct: 5   LDIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYN 64

Query: 64  VIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYLVTV 123
            +KPI I+N +I +   GK  SG  EIPF   L      +   YET+HG  +NIQY +  
Sbjct: 65  SVKPIQIINSNIEMVKPGKFPSGKTEIPFEFPLHVKGNKV--LYETYHGVFVNIQYTLRC 124

Query: 124 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYIT----QDTQRHPLLPELRSG 183
           D+ R  L K L+ T EFIV S      +   S   V F IT    Q+ +   LLP+    
Sbjct: 125 DMKRSLLAKDLTKTCEFIVHSAPQ---KGKFSPSPVHFTITPETLQNARERALLPK---- 184

Query: 184 GFRVTGKM-STLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQT 243
            F + G + ST C ++ PLTGEL+VE+S   I S+++ L RVE+    E    + + IQ 
Sbjct: 185 -FLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQN 244

Query: 244 TQIADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPR 303
            QIADGDVCR +++PIY++ PRL TCPT+    F +EF+V IV+        LHP     
Sbjct: 245 IQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKVEFEVNIVVL-------LHPD---- 296

Query: 304 TPRLWLAIESLPMELLR 316
                L  E+ P++L R
Sbjct: 305 ----HLITENFPLKLCR 296

[Close]

BLAST of CsaV3_1G007200 vs. Swiss-Prot
Match: sp|O14972|DSCR3_HUMAN (Down syndrome critical region protein 3 OS=Homo sapiens OX=9606 GN=DSCR3 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.9e-51
Identity = 120/314 (38.22%), Postives = 175/314 (55.73%), Query Frame = 0


Query: 4   VELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVYG 63
           +++K+ R N++Y   E L G ++++S+ S+ H G+ L + G+VNLQ+   S GV E+ Y 
Sbjct: 5   LDIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYN 64

Query: 64  VIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYLVTV 123
            +KPI I+N +I +   GK  SG  EIPF   L      +   YET+HG  +NIQY +  
Sbjct: 65  SVKPIQIINSTIEMVKPGKFPSGKTEIPFEFPLHLKGNKV--LYETYHGVFVNIQYTLRC 124

Query: 124 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYIT-QDTQRHPLLPELRSGGFR 183
           D+ R  L K L+ T EFIV S        P   +  I   T Q+ +   LLP+     F 
Sbjct: 125 DMKRSLLAKDLTKTCEFIVHSAPQKGKFTPSPVDFTITPETLQNVKERALLPK-----FL 184

Query: 184 VTGKM-STLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQI 243
           + G + ST C ++ PLTGEL+VE+S   I S+++ L RVE+    E    + + IQ  QI
Sbjct: 185 LRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQI 244

Query: 244 ADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPR 303
           ADGDVCR +++PIY++ PRL TCPT+    F +EF+V IV+        LHP        
Sbjct: 245 ADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKVEFEVNIVVL-------LHPD------- 296

Query: 304 LWLAIESLPMELLR 316
             L  E+ P++L R
Sbjct: 305 -HLITENFPLKLCR 296

[Close]

BLAST of CsaV3_1G007200 vs. Swiss-Prot
Match: sp|O35075|DSCR3_MOUSE (Down syndrome critical region protein 3 homolog OS=Mus musculus OX=10090 GN=Dscr3 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 8.6e-51
Identity = 112/289 (38.75%), Postives = 170/289 (58.82%), Query Frame = 0


Query: 4   VELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVYG 63
           +++K+ R N++Y   E L G ++++S+ S+ H G+ L + G+VNLQ+   S GV E+ Y 
Sbjct: 5   LDIKIKRANKVYHAGEMLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYN 64

Query: 64  VIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYLVTV 123
            +KPI I+N +I V   GK+ SG  E+PF   L      +   YET+HG  +NIQY +  
Sbjct: 65  SVKPIQIINSTIDVLKPGKIPSGKTEVPFEFPLLVKGSKV--LYETYHGVFVNIQYTLRC 124

Query: 124 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYIT----QDTQRHPLLPELRSG 183
           D+ R  L K L+ T EFIV S      +  L+   V F IT    Q+ +    LP+    
Sbjct: 125 DMRRSLLAKDLTKTCEFIVHSAPQ---KGKLTPSPVDFTITPETLQNVKERASLPK---- 184

Query: 184 GFRVTGKM-STLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQT 243
            F + G + ST C+++ PLTGEL+VE S   I SI++ L RVE+    E    + + IQ 
Sbjct: 185 -FFIRGHLNSTNCAITQPLTGELVVEHSDAAIRSIELQLVRVETCGCAEGYARDATEIQN 244

Query: 244 TQIADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSE 288
            QIADGD+CRN+++P+Y++ PRL TCPT+    F +EF+V +V+   ++
Sbjct: 245 IQIADGDICRNLSVPLYMVFPRLFTCPTLETTNFKVEFEVNVVVLLHAD 283

[Close]

BLAST of CsaV3_1G007200 vs. Swiss-Prot
Match: sp|Q54DI8|DSCR3_DICDI (Down syndrome critical region protein 3 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0292212 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.9e-45
Identity = 101/289 (34.95%), Postives = 169/289 (58.48%), Query Frame = 0


Query: 3   VVELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVY 62
           V++LKL + ++IYRP   + G +++NS+  +SHSG+ + + G+V LQ+   S G+ E+ Y
Sbjct: 4   VLDLKLKKIDKIYRPGSKVSGNVVINSKDDMSHSGVTIVVEGTVQLQLSSKSVGLFEAFY 63

Query: 63  GVIKPISIVNRSILV-SPSGKLASGTNEIPFSVILRQ-PNENLGKYYETFHGTDINIQYL 122
             +KPI++++ +I V +  GK  +G  E+PF   L   PN+ L   Y+T+HG  +NIQY 
Sbjct: 64  NSLKPITLMHYTISVTNGGGKFQAGITELPFEFTLEPLPNQQL---YDTYHGVFVNIQYS 123

Query: 123 VTVDISRGYLHKSLSATMEFIVE--SDTADFLERPLSSEMVIFYI-TQDTQRHPLLPELR 182
           +  D+ RG L K LS T+EFIVE  S   + L +     ++ F I          + +  
Sbjct: 124 IKCDVKRGILSKDLSKTIEFIVEVPSQNKEVLMKSTPESLITFNIXXXXXXXXKKISKAD 183

Query: 183 SGGFRVTGKM-STLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVI 242
              F+++G + S +C++++   G +I+E++   I S+++ L RVE+    +    E + I
Sbjct: 184 VPTFKISGGLVSAICNINEAFQGHMIIESADTVIKSVELQLVRVETCGCADGYAREVTEI 243

Query: 243 QTTQIADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQ 286
           Q  QIADGD+ RN  +P+Y++ PRL TC +     F IEF+V +VI  +
Sbjct: 244 QNIQIADGDIWRNFKIPLYMVFPRLFTCISTAGKTFKIEFEVNLVIMLE 289

[Close]

BLAST of CsaV3_1G007200 vs. TrEMBL
Match: tr|A0A0A0LT45|A0A0A0LT45_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042860 PE=4 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 8.3e-176
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MPVVELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIES 60
           MPVVELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIES
Sbjct: 1   MPVVELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIES 60

Query: 61  VYGVIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYL 120
           VYGVIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYL
Sbjct: 61  VYGVIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYL 120

Query: 121 VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG 180
           VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG
Sbjct: 121 VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG 180

Query: 181 FRVTGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQ 240
           FRVTGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQ
Sbjct: 181 FRVTGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQ 240

Query: 241 IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP 300
           IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP
Sbjct: 241 IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP 300

Query: 301 RLWLAIESLPMELLRCRSDD 321
           RLWLAIESLPMELLRCRSDD
Sbjct: 301 RLWLAIESLPMELLRCRSDD 320

[Close]

BLAST of CsaV3_1G007200 vs. TrEMBL
Match: tr|A0A1S3CMM2|A0A1S3CMM2_CUCME (Down syndrome critical region protein 3 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502664 PE=4 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 4.7e-171
Identity = 311/320 (97.19%), Postives = 316/320 (98.75%), Query Frame = 0


Query: 1   MPVVELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIES 60
           MPVVELKLSRTNRIYRP EHLQGQIIVNSRSSISHSGIR+ALNGSVNLQVRGGSAGVIES
Sbjct: 1   MPVVELKLSRTNRIYRPCEHLQGQIIVNSRSSISHSGIRIALNGSVNLQVRGGSAGVIES 60

Query: 61  VYGVIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYL 120
           VYGVIKPI IVNRSILV PSGKLASGTNEIPFSVILRQP+ENLGK+YETFHGTDINIQYL
Sbjct: 61  VYGVIKPILIVNRSILVRPSGKLASGTNEIPFSVILRQPSENLGKFYETFHGTDINIQYL 120

Query: 121 VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG 180
           VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG
Sbjct: 121 VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG 180

Query: 181 FRVTGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQ 240
           FRVTGKMSTLCSLSDP+TGELIVETSAV INSIDIHLCRVESVILGERIITETSVIQTTQ
Sbjct: 181 FRVTGKMSTLCSLSDPITGELIVETSAVLINSIDIHLCRVESVILGERIITETSVIQTTQ 240

Query: 241 IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP 300
           IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP
Sbjct: 241 IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP 300

Query: 301 RLWLAIESLPMELLRCRSDD 321
           RLWLAIESLPMEL+RCRSDD
Sbjct: 301 RLWLAIESLPMELIRCRSDD 320

[Close]

BLAST of CsaV3_1G007200 vs. TrEMBL
Match: tr|A0A1S3CMT2|A0A1S3CMT2_CUCME (Down syndrome critical region protein 3 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502664 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 1.3e-144
Identity = 278/320 (86.88%), Postives = 281/320 (87.81%), Query Frame = 0


Query: 1   MPVVELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIES 60
           MPVVELKLSRTNRIYRP EHLQGQIIVNSRSSISHSGIR+ALNGSVNLQVRGGSAGVIES
Sbjct: 1   MPVVELKLSRTNRIYRPCEHLQGQIIVNSRSSISHSGIRIALNGSVNLQVRGGSAGVIES 60

Query: 61  VYGVIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYL 120
           VYGVIKPI IVNRSILV PSGKLAS                                   
Sbjct: 61  VYGVIKPILIVNRSILVRPSGKLAS----------------------------------- 120

Query: 121 VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG 180
           VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG
Sbjct: 121 VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG 180

Query: 181 FRVTGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQ 240
           FRVTGKMSTLCSLSDP+TGELIVETSAV INSIDIHLCRVESVILGERIITETSVIQTTQ
Sbjct: 181 FRVTGKMSTLCSLSDPITGELIVETSAVLINSIDIHLCRVESVILGERIITETSVIQTTQ 240

Query: 241 IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP 300
           IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP
Sbjct: 241 IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP 285

Query: 301 RLWLAIESLPMELLRCRSDD 321
           RLWLAIESLPMEL+RCRSDD
Sbjct: 301 RLWLAIESLPMELIRCRSDD 285

[Close]

BLAST of CsaV3_1G007200 vs. TrEMBL
Match: tr|A0A1S3CPJ5|A0A1S3CPJ5_CUCME (Down syndrome critical region protein 3 homolog isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502664 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 7.1e-143
Identity = 275/320 (85.94%), Postives = 278/320 (86.88%), Query Frame = 0


Query: 1   MPVVELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIES 60
           MPVVELKLSRTNRIYRP EHLQGQIIVNSRSSISHSGIR+ALNGSVNLQVRGGSAGVIES
Sbjct: 1   MPVVELKLSRTNRIYRPCEHLQGQIIVNSRSSISHSGIRIALNGSVNLQVRGGSAGVIES 60

Query: 61  VYGVIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYL 120
           VYGVIKPI IVNRSILV PSGKLAS                                   
Sbjct: 61  VYGVIKPILIVNRSILVRPSGKLAS----------------------------------- 120

Query: 121 VTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG 180
              DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG
Sbjct: 121 ---DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGG 180

Query: 181 FRVTGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQ 240
           FRVTGKMSTLCSLSDP+TGELIVETSAV INSIDIHLCRVESVILGERIITETSVIQTTQ
Sbjct: 181 FRVTGKMSTLCSLSDPITGELIVETSAVLINSIDIHLCRVESVILGERIITETSVIQTTQ 240

Query: 241 IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP 300
           IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP
Sbjct: 241 IADGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTP 282

Query: 301 RLWLAIESLPMELLRCRSDD 321
           RLWLAIESLPMEL+RCRSDD
Sbjct: 301 RLWLAIESLPMELIRCRSDD 282

[Close]

BLAST of CsaV3_1G007200 vs. TrEMBL
Match: tr|B9IED2|B9IED2_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G037600v3 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 1.9e-135
Identity = 241/315 (76.51%), Postives = 288/315 (91.43%), Query Frame = 0


Query: 4   VELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVYG 63
           + LK SR+NRIYRPSE ++G+I++ S SSISH GIRL++NGSVNLQVRGGSAGVIE+ YG
Sbjct: 5   IALKFSRSNRIYRPSEPVEGKIVIKSPSSISHYGIRLSVNGSVNLQVRGGSAGVIETFYG 64

Query: 64  VIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNE-NLGKYYETFHGTDINIQYLVT 123
           V+KPI+IVN+SI V PSGK+ SGT E+PF+++L+Q  E +L ++YETFHGTD++IQYL T
Sbjct: 65  VVKPITIVNKSIEVKPSGKIGSGTTEVPFTMVLKQNGEKSLERFYETFHGTDVSIQYLFT 124

Query: 124 VDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGGFR 183
           VDI+RGYL+KSLSATME IVESD AD LERP+S EM IFYITQDTQRHPLLPE++SGGFR
Sbjct: 125 VDIARGYLYKSLSATMEVIVESDKADLLERPVSPEMAIFYITQDTQRHPLLPEIKSGGFR 184

Query: 184 VTGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIA 243
           VTG+MSTLCSL DP++GEL VETSAVPI+SIDIHL RVES+++GE+I+TETS+IQTTQIA
Sbjct: 185 VTGRMSTLCSLLDPISGELTVETSAVPISSIDIHLLRVESILMGEKIVTETSLIQTTQIA 244

Query: 244 DGDVCRNITLPIYVILPRLLTCPTVFAGPFSIEFKVYIVITFQSELSKLHPKTDPRTPRL 303
           DGDVCRN+TLPIYVILPRLLTCP+VFAGPFSIEFKV IVI+FQSELSKLH K+DPRTPRL
Sbjct: 245 DGDVCRNLTLPIYVILPRLLTCPSVFAGPFSIEFKVSIVISFQSELSKLHKKSDPRTPRL 304

Query: 304 WLAIESLPMELLRCR 318
           WLA+E+LP+EL+R R
Sbjct: 305 WLAMETLPLELVRTR 319

The following BLAST results are available for this feature:

BLAST of CsaV3_1G007200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137506.1	1.3e-175	100.00	PREDICTED: Down syndrome critical region protein 3 homolog isoform X1 [Cucumis s...	[more]
XP_008464938.1	7.2e-171	97.19	PREDICTED: Down syndrome critical region protein 3 homolog isoform X1 [Cucumis m...	[more]
XP_022924207.1	1.6e-162	93.06	Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita moschata] ...	[more]
XP_023001800.1	3.0e-161	92.43	Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita maxima]	[more]
XP_022137704.1	4.1e-158	90.85	Down syndrome critical region protein 3 homolog isoform X1 [Momordica charantia]	[more]

BLAST of CsaV3_1G007200 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G48550.1	3.5e-127	69.72	Vacuolar protein sorting-associated protein 26	[more]

BLAST of CsaV3_1G007200 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5RF33\|DSCR3_PONAB	3.0e-51	38.49	Down syndrome critical region protein 3 homolog OS=Pongo abelii OX=9601 GN=DSCR3...	[more]
sp\|O14972\|DSCR3_HUMAN	3.9e-51	38.22	Down syndrome critical region protein 3 OS=Homo sapiens OX=9606 GN=DSCR3 PE=2 SV...	[more]
sp\|O35075\|DSCR3_MOUSE	8.6e-51	38.75	Down syndrome critical region protein 3 homolog OS=Mus musculus OX=10090 GN=Dscr...	[more]
sp\|Q54DI8\|DSCR3_DICDI	1.9e-45	34.95	Down syndrome critical region protein 3 homolog OS=Dictyostelium discoideum OX=4...	[more]

BLAST of CsaV3_1G007200 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT45\|A0A0A0LT45_CUCSA	8.3e-176	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042860 PE=4 SV=1	[more]
tr\|A0A1S3CMM2\|A0A1S3CMM2_CUCME	4.7e-171	97.19	Down syndrome critical region protein 3 homolog isoform X1 OS=Cucumis melo OX=36...	[more]
tr\|A0A1S3CMT2\|A0A1S3CMT2_CUCME	1.3e-144	86.88	Down syndrome critical region protein 3 homolog isoform X2 OS=Cucumis melo OX=36...	[more]
tr\|A0A1S3CPJ5\|A0A1S3CPJ5_CUCME	7.1e-143	85.94	Down syndrome critical region protein 3 homolog isoform X3 OS=Cucumis melo OX=36...	[more]
tr\|B9IED2\|B9IED2_POPTR	1.9e-135	76.51	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G037600v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014756	Ig_E-set
IPR028934	Vps26-related
IPR014752	Arrestin_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G007200.1	CsaV3_1G007200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014752	Arrestin, C-terminal	GENE3D	G3DSA:2.60.40.640		coord: 186..290 e-value: 9.9E-9 score: 36.9
IPR014752	Arrestin, C-terminal	GENE3D	G3DSA:2.60.40.640		coord: 3..146 e-value: 4.4E-29 score: 102.9
IPR028934	Vacuolar protein sorting protein 26 related	PFAM	PF03643	Vps26	coord: 11..283 e-value: 3.1E-32 score: 111.6
IPR028934	Vacuolar protein sorting protein 26 related	PANTHER	PTHR12233	VACUOLAR PROTEIN SORTING 26 RELATED	coord: 1..315
None	No IPR available	PANTHER	PTHR12233:SF2	DOWN SYNDROME CRITICAL REGION PROTEIN 3	coord: 1..315
IPR014756	Immunoglobulin E-set	SUPERFAMILY	SSF81296	E set domains	coord: 4..144

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G007200	CSPI01G07260	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G007200	Cucsa.121970	Cucumber (Gy14) v1	cgycucB163
CsaV3_1G007200	CmaCh13G009850	Cucurbita maxima (Rimu)	cmacucB0248
CsaV3_1G007200	CmoCh13G010200	Cucurbita moschata (Rifu)	cmocucB0234
CsaV3_1G007200	Cp4.1LG20g01620	Cucurbita pepo (Zucchini)	cpecucB0623
CsaV3_1G007200	CsGy1G007100	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G007200	Carg04851	Silver-seed gourd	carcucB0418
CsaV3_1G007200	Cla018450	Watermelon (97103) v1	cucwmB070
CsaV3_1G007200	MELO3C002137	Melon (DHL92) v3.5.1	cucmeB024
CsaV3_1G007200	ClCG04G010590	Watermelon (Charleston Gray)	cucwcgB063
CsaV3_1G007200	Lsi02G002390	Bottle gourd (USVL1VR-Ls)	cuclsiB022
CsaV3_1G007200	MELO3C002137.2	Melon (DHL92) v3.6.1	cucmedB022
CsaV3_1G007200	Cla97C04G077410	Watermelon (97103) v2	cucwmbB054

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G007200	Silver-seed gourd	carcucB0529
CsaV3_1G007200	Cucurbita maxima (Rimu)	cmacucB0464
CsaV3_1G007200	Cucurbita moschata (Rifu)	cmocucB0457
CsaV3_1G007200	Cucurbita pepo (Zucchini)	cpecucB0031
CsaV3_1G007200	Wax gourd	cucwgoB031