CsaV3_1G005590 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G005590
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 3622149 .. 3622498 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGAAAAAAGAGAAGATTGAGAGAACCAAAGTGAGGGAAATGGGAAAGAAAGCAAAGAAGAGGAAGATCAAAGAAAAAAAGGGGAAAACCCAAGTGAGGAAAGAGGCAAGAGAAAGTGTAGAGGGGGAGGTACGATATGAATCGCACCGACAATGAGTAAATGAATGAAGAAGAAGAAGAAGAAGAAGAAAAGGAAGATATGGAGGAAGTTAAAAGGGAAGGGACTGGCGGAAAGGGAGAATGGCGGGCAGCAAAACAGGAAAGGCAAAGGCAAAGGCAAAGGCGAAGGCATTCAATCCTCTGCTTACAAGATCGCACGAAAGGTCAGCCTAAGATTTCGGCCGTGA

mRNA sequence

ATGCGGAAAAAAGAGAAGATTGAGAGAACCAAAGTGAGGGAAATGGGAAAGAAAGCAAAGAAGAGGAAGATCAAAGAAAAAAAGGGGAAAACCCAAGTGAGGAAAGAGGCAAGAGAAAGTGTAGAGGGGGAGAAGAAGAAGAAGAAGAAGAAAAGGAAGATATGGAGGAAGTTAAAAGGGAAGGGACTGGCGGAAAGGGAGAATGGCGGGCAGCAAAACAGGAAAGGCAAAGGCAAAGGCAAAGGCGAAGGCATTCAATCCTCTGCTTACAAGATCGCACGAAAGGTCAGCCTAAGATTTCGGCCGTGA

Coding sequence (CDS)

ATGCGGAAAAAAGAGAAGATTGAGAGAACCAAAGTGAGGGAAATGGGAAAGAAAGCAAAGAAGAGGAAGATCAAAGAAAAAAAGGGGAAAACCCAAGTGAGGAAAGAGGCAAGAGAAAGTGTAGAGGGGGAGAAGAAGAAGAAGAAGAAGAAAAGGAAGATATGGAGGAAGTTAAAAGGGAAGGGACTGGCGGAAAGGGAGAATGGCGGGCAGCAAAACAGGAAAGGCAAAGGCAAAGGCAAAGGCGAAGGCATTCAATCCTCTGCTTACAAGATCGCACGAAAGGTCAGCCTAAGATTTCGGCCGTGA

Protein sequence

MRKKEKIERTKVREMGKKAKKRKIKEKKGKTQVRKEARESVEGEKKKKKKKRKIWRKLKGKGLAERENGGQQNRKGKGKGKGEGIQSSAYKIARKVSLRFRP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G005590.1CsaV3_1G005590.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..44

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G005590Cucumber (Chinese Long) v3cuccucB000
CsaV3_1G005590Cucumber (Chinese Long) v3cuccucB034
CsaV3_1G005590Cucumber (Chinese Long) v3cuccucB037
CsaV3_1G005590Cucumber (Chinese Long) v3cuccucB047
CsaV3_1G005590Silver-seed gourdcarcucB0058
CsaV3_1G005590Silver-seed gourdcarcucB0115
CsaV3_1G005590Silver-seed gourdcarcucB0420
CsaV3_1G005590Silver-seed gourdcarcucB0498
CsaV3_1G005590Silver-seed gourdcarcucB0647
CsaV3_1G005590Silver-seed gourdcarcucB0719
CsaV3_1G005590Cucumber (Gy14) v2cgybcucB002
CsaV3_1G005590Cucumber (Gy14) v2cgybcucB004
CsaV3_1G005590Cucumber (Gy14) v2cgybcucB203
CsaV3_1G005590Cucumber (Gy14) v2cgybcucB200
CsaV3_1G005590Cucumber (Gy14) v2cgybcucB250
CsaV3_1G005590Cucumber (Gy14) v1cgycucB143
CsaV3_1G005590Cucumber (Gy14) v1cgycucB241
CsaV3_1G005590Cucumber (Gy14) v1cgycucB315
CsaV3_1G005590Cucumber (Gy14) v1cgycucB434
CsaV3_1G005590Cucurbita maxima (Rimu)cmacucB0063
CsaV3_1G005590Cucurbita maxima (Rimu)cmacucB0119
CsaV3_1G005590Cucurbita maxima (Rimu)cmacucB0185
CsaV3_1G005590Cucurbita maxima (Rimu)cmacucB0237
CsaV3_1G005590Cucurbita maxima (Rimu)cmacucB0324
CsaV3_1G005590Cucurbita maxima (Rimu)cmacucB0479
CsaV3_1G005590Cucurbita maxima (Rimu)cmacucB0513
CsaV3_1G005590Cucurbita maxima (Rimu)cmacucB0815
CsaV3_1G005590Cucurbita maxima (Rimu)cmacucB0816
CsaV3_1G005590Cucurbita moschata (Rifu)cmocucB0049
CsaV3_1G005590Cucurbita moschata (Rifu)cmocucB0092
CsaV3_1G005590Cucurbita moschata (Rifu)cmocucB0170
CsaV3_1G005590Cucurbita moschata (Rifu)cmocucB0224
CsaV3_1G005590Cucurbita moschata (Rifu)cmocucB0320
CsaV3_1G005590Cucurbita moschata (Rifu)cmocucB0466
CsaV3_1G005590Cucurbita moschata (Rifu)cmocucB0501
CsaV3_1G005590Cucurbita moschata (Rifu)cmocucB0799
CsaV3_1G005590Cucurbita moschata (Rifu)cmocucB0800
CsaV3_1G005590Cucurbita pepo (Zucchini)cpecucB0020
CsaV3_1G005590Cucurbita pepo (Zucchini)cpecucB0191
CsaV3_1G005590Cucurbita pepo (Zucchini)cpecucB0448
CsaV3_1G005590Cucurbita pepo (Zucchini)cpecucB0471
CsaV3_1G005590Cucurbita pepo (Zucchini)cpecucB0472
CsaV3_1G005590Cucurbita pepo (Zucchini)cpecucB0636
CsaV3_1G005590Cucurbita pepo (Zucchini)cpecucB0665
CsaV3_1G005590Cucurbita pepo (Zucchini)cpecucB0816
CsaV3_1G005590Wild cucumber (PI 183967)cpicucB001
CsaV3_1G005590Wild cucumber (PI 183967)cpicucB003
CsaV3_1G005590Wild cucumber (PI 183967)cpicucB253
CsaV3_1G005590Wild cucumber (PI 183967)cpicucB256
CsaV3_1G005590Wild cucumber (PI 183967)cpicucB311
CsaV3_1G005590Bottle gourd (USVL1VR-Ls)cuclsiB022
CsaV3_1G005590Bottle gourd (USVL1VR-Ls)cuclsiB046
CsaV3_1G005590Bottle gourd (USVL1VR-Ls)cuclsiB059
CsaV3_1G005590Bottle gourd (USVL1VR-Ls)cuclsiB083
CsaV3_1G005590Bottle gourd (USVL1VR-Ls)cuclsiB093
CsaV3_1G005590Melon (DHL92) v3.5.1cucmeB001
CsaV3_1G005590Melon (DHL92) v3.5.1cucmeB004
CsaV3_1G005590Melon (DHL92) v3.5.1cucmeB024
CsaV3_1G005590Melon (DHL92) v3.5.1cucmeB056
CsaV3_1G005590Melon (DHL92) v3.5.1cucmeB062
CsaV3_1G005590Melon (DHL92) v3.6.1cucmedB001
CsaV3_1G005590Melon (DHL92) v3.6.1cucmedB004
CsaV3_1G005590Melon (DHL92) v3.6.1cucmedB022
CsaV3_1G005590Melon (DHL92) v3.6.1cucmedB053
CsaV3_1G005590Melon (DHL92) v3.6.1cucmedB059
CsaV3_1G005590Watermelon (Charleston Gray)cucwcgB004
CsaV3_1G005590Watermelon (Charleston Gray)cucwcgB063
CsaV3_1G005590Watermelon (Charleston Gray)cucwcgB069
CsaV3_1G005590Watermelon (Charleston Gray)cucwcgB090
CsaV3_1G005590Watermelon (Charleston Gray)cucwcgB099
CsaV3_1G005590Watermelon (97103) v1cucwmB005
CsaV3_1G005590Watermelon (97103) v1cucwmB011
CsaV3_1G005590Watermelon (97103) v1cucwmB043
CsaV3_1G005590Watermelon (97103) v1cucwmB070
CsaV3_1G005590Watermelon (97103) v1cucwmB107
CsaV3_1G005590Watermelon (97103) v2cucwmbB054
CsaV3_1G005590Watermelon (97103) v2cucwmbB058
CsaV3_1G005590Watermelon (97103) v2cucwmbB078
CsaV3_1G005590Watermelon (97103) v2cucwmbB095
CsaV3_1G005590Wax gourdcucwgoB008
CsaV3_1G005590Wax gourdcucwgoB052
CsaV3_1G005590Wax gourdcucwgoB074
CsaV3_1G005590Wax gourdcucwgoB121