CsaV3_1G005200 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACCAGTAGGGTTGCCTCCAGGGTTCAGGTTCCATCCCACCGACGAAGAGCTCGTCAATTACTATCTCAAGAGGAAGATCAGTGGTCAGGAAATCGAGCTTGATATCATTCCTGAAGTGGATCTCTACAAATGCGAGCCCTGGGAACTATCAGGTTAATTAATCAATCAGTCAATCAATCAATTTCCCATTTTAGTTACCCATTTTAGTTACTTAATGATTGATATTTGGGGACATTAAATTATATTTGTAGAAAAGTCGTTTCTTCCAAGTAGAGATCCAGAATGGTATTTCTTTGGGCCAAGAGACAGAAAATATCCAAATGGGTTCAGAACAAACAGAGCCACAAGAGCAGGGTACTGGAAATCCACTGGAAAAGACAGGAGAGTGAGTTCACAAAACCGAGCCATTGGGATGAAGAAGACGCTTGTTTACTACAGAGGTCGAGCCCCTCAAGGGATTAGGACCGACTGGGTCATGCATGAATATCGCCTCGATGACAAAGATTGTGAAGACAGCTCTGGCATTCAGGTATTCTTTTTTTTTTTCCCCCTTTAATTCTCTTTTTCCCACCCACAATCATTACCACATTCATATTTTTCTTTTCTTCTCTTTTGATTTTTGTTTCTTTGCGATCATATTCTCTTCTTTAGAATTTTTATGATTGGGATTTAAAAGAACATGAGCTGCCATCAGAAGGGAATTAAGAGGAGAACTTTGACAAAGCTTTTTTTTTCTTTTTTTTTGGGAGTCATCAATTTGTATCTTTTGCATTGTTGGGGGATATAAGAAAGCTCCATAAAGTTTGTGTCACACATTATATTCTTCTAAGTTCCTAAAGCCAAACCCAAACCCAAAGCTCTACTCTACGGTGTTTGAATCAAAGGACTTCACCGAAAGTTATGTTATATGCTCTCTTCACCCTCTCATCCACCATTTTGAACTTTAAACCTACTGTTTGTTTTACTGTCCCATGCACGCATGCTCCTCTCTCTAACATTTTTCGCTACATTGTTCAAACATTTTCCTTTACATTTAGGCTAAATAATCATTTTGAAAATCTAGACTCTTAAAACTTTTAAAATTATTTATTTATCTCTCTGAATTCATAGTTTTATGCATGTTTCATAGAGTCTCTAAACTTAAATCTCGAATGTGTCATTGAAATTGAAAGCTTACACATTTTGTTAAGACATTCATTTAGGTTTTTGAAAATGGAGCATATTTTTCTCTCAATTTTTGTAATGATTTTTTAAATTTTAAAATAAAAAAATAATCCTTTAAAGACATAGCTTATTTATATATATATATATATATATAAAAGACAAGGAAAATAAATAGAAAAAATTAAACATGAAATGAATGATCAAACACAACCTTAAATAATATAATTATAAAGCTATTGGATCATAGTGTTTAAAGAGAGATGTGTTCCAAATAATAACAAAATGAACATAAATATCTAAAAAAAAGAATACATTTTTCTTTTAAAAATTATACATTTGAACTATAATTAGTTGCTAACTAAACAGTCCACCAACAATAATAATAAAAATATGAACATGGAAAATTTTTGCTGTGTTGTTCTAAATAACATAGATTATAGTTGCTCCAAATGTTACGTGGAATTAAGAGAAATGGATAGGTAGTTACTGACAGTTATTATTATTTTTTTCTTTTAAGCAAATTGTAATGTAATGATGTTGAGTAGAATTTGAGAGTAGAAAGAAGAGTAGAAAGAAGAGTTGAAAAAAAAGAAAAAGAAAAAAGAAAGTCCATTTAGAGGGAAGCATGATAAAAAGAAATGAGTGGCATACATATTCTTTACTTGTACCAGGATCTTTCAAGTCATAAAGAAAGTTGAGTTTGGCTTTTGTTTTCTTATAGCAAATGAGACAAAAGTGCTATCCCCTATGGTTTAAAACACACACACACACACACACACACAAACAAACTGTTATATTTGATTTTAATATATTCCATCTTTACAGCATTTTAGATGATGATCTATTCCATTATGAAAGTTATTGTATTCTCTCATATTAATAAAAAGAAAAAAGAAATTATCTACCAAAATGAAGCTAGAGAGAGAAAGGCAAAAGAAGAATGTCCCCCATCATTTGCTTTTTTTGTTAGTTGTAAGAAGATGTCTCTCACTTTTCACTTTATTCCATCACTAAAATCACCCAATGGACCTTTCTTTGTCCACGAGTTTTGTTCTTGTTACTCTTTCTAAAGCGTTCGCCATCAATTTCTCCTTACATTCCTCTCTTTTCACTCATCTCTTCTCTTGACATGAACTATGTTCAGATTGAGTCTTTACAGTTGGTGAATGAAAAAAGAAAATCAAAAGCTGAAATTAAAAATATAAAGCAGAAGAAAAGAAAGATGACAAATCAGAAGGGAGATGAAAATTGCAAGTGTTTTTTGTTTTGTTTTGTTTATTGGGTTGCAGGATTCTTACGCCTTGTGTAGAGTATTCAAGAAAAATGGAATATGTTCAGAAGTGGAAGAAATATTAGTAGGTGGGCAAAGCAGCAGCAGCAGCTTGTCATTTATGGAGAACTCAAACTCAACATCACAAACTTTAGTCAATGATTACGAAACTCTATCACCTGATATTCTGATGGCAGCTTCATCTTCTTGTGTGGAAGAAGAGGAAAAGGATGATTCATGGATGCAATTCATTACAGAAGATGCATGGTGTGCTTCCAATTCATCAGCCATCGGCCTCGATGACCTCTCTCACCTGACTTTCACCAATTGA ATGGCACCAGTAGGGTTGCCTCCAGGGTTCAGGTTCCATCCCACCGACGAAGAGCTCGTCAATTACTATCTCAAGAGGAAGATCAGTGGTCAGGAAATCGAGCTTGATATCATTCCTGAAGTGGATCTCTACAAATGCGAGCCCTGGGAACTATCAGAAAAGTCGTTTCTTCCAAGTAGAGATCCAGAATGGTATTTCTTTGGGCCAAGAGACAGAAAATATCCAAATGGGTTCAGAACAAACAGAGCCACAAGAGCAGGGTACTGGAAATCCACTGGAAAAGACAGGAGAGTGAGTTCACAAAACCGAGCCATTGGGATGAAGAAGACGCTTGTTTACTACAGAGGTCGAGCCCCTCAAGGGATTAGGACCGACTGGGTCATGCATGAATATCGCCTCGATGACAAAGATTGTGAAGACAGCTCTGGCATTCAGGATTCTTACGCCTTGTGTAGAGTATTCAAGAAAAATGGAATATGTTCAGAAGTGGAAGAAATATTAGTAGGTGGGCAAAGCAGCAGCAGCAGCTTGTCATTTATGGAGAACTCAAACTCAACATCACAAACTTTAGTCAATGATTACGAAACTCTATCACCTGATATTCTGATGGCAGCTTCATCTTCTTGTGTGGAAGAAGAGGAAAAGGATGATTCATGGATGCAATTCATTACAGAAGATGCATGGTGTGCTTCCAATTCATCAGCCATCGGCCTCGATGACCTCTCTCACCTGACTTTCACCAATTGA ATGGCACCAGTAGGGTTGCCTCCAGGGTTCAGGTTCCATCCCACCGACGAAGAGCTCGTCAATTACTATCTCAAGAGGAAGATCAGTGGTCAGGAAATCGAGCTTGATATCATTCCTGAAGTGGATCTCTACAAATGCGAGCCCTGGGAACTATCAGAAAAGTCGTTTCTTCCAAGTAGAGATCCAGAATGGTATTTCTTTGGGCCAAGAGACAGAAAATATCCAAATGGGTTCAGAACAAACAGAGCCACAAGAGCAGGGTACTGGAAATCCACTGGAAAAGACAGGAGAGTGAGTTCACAAAACCGAGCCATTGGGATGAAGAAGACGCTTGTTTACTACAGAGGTCGAGCCCCTCAAGGGATTAGGACCGACTGGGTCATGCATGAATATCGCCTCGATGACAAAGATTGTGAAGACAGCTCTGGCATTCAGGATTCTTACGCCTTGTGTAGAGTATTCAAGAAAAATGGAATATGTTCAGAAGTGGAAGAAATATTAGTAGGTGGGCAAAGCAGCAGCAGCAGCTTGTCATTTATGGAGAACTCAAACTCAACATCACAAACTTTAGTCAATGATTACGAAACTCTATCACCTGATATTCTGATGGCAGCTTCATCTTCTTGTGTGGAAGAAGAGGAAAAGGATGATTCATGGATGCAATTCATTACAGAAGATGCATGGTGTGCTTCCAATTCATCAGCCATCGGCCTCGATGACCTCTCTCACCTGACTTTCACCAATTGA MAPVGLPPGFRFHPTDEELVNYYLKRKISGQEIELDIIPEVDLYKCEPWELSEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSSQNRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKDCEDSSGIQDSYALCRVFKKNGICSEVEEILVGGQSSSSSLSFMENSNSTSQTLVNDYETLSPDILMAASSSCVEEEEKDDSWMQFITEDAWCASNSSAIGLDDLSHLTFTN
BLAST of CsaV3_1G005200 vs. NCBI nr
Match: XP_004137396.1 (PREDICTED: NAC domain-containing protein 86 [Cucumis sativus] >KGN63971.1 hypothetical protein Csa_1G032410 [Cucumis sativus]) HSP 1 Score: 481.1 bits (1237), Expect = 2.3e-132 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. NCBI nr
Match: XP_008439242.1 (PREDICTED: NAC domain-containing protein 86 [Cucumis melo]) HSP 1 Score: 480.3 bits (1235), Expect = 3.9e-132 Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. NCBI nr
Match: XP_022998740.1 (NAC domain-containing protein 86-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 447.6 bits (1150), Expect = 2.8e-122 Identity = 234/250 (93.60%), Postives = 238/250 (95.20%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. NCBI nr
Match: XP_022949589.1 (NAC domain-containing protein 86-like isoform X1 [Cucurbita moschata] >XP_023523518.1 NAC domain-containing protein 86-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 445.7 bits (1145), Expect = 1.1e-121 Identity = 232/250 (92.80%), Postives = 236/250 (94.40%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. NCBI nr
Match: XP_023001123.1 (NAC domain-containing protein 86 [Cucurbita maxima]) HSP 1 Score: 443.0 bits (1138), Expect = 6.9e-121 Identity = 233/248 (93.95%), Postives = 237/248 (95.56%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. TAIR10
Match: AT3G17730.1 (NAC domain containing protein 57) HSP 1 Score: 366.3 bits (939), Expect = 1.5e-101 Identity = 177/240 (73.75%), Postives = 197/240 (82.08%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. TAIR10
Match: AT1G65910.1 (NAC domain containing protein 28) HSP 1 Score: 282.0 bits (720), Expect = 3.7e-76 Identity = 128/197 (64.97%), Postives = 161/197 (81.73%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. TAIR10
Match: AT5G17260.1 (NAC domain containing protein 86) HSP 1 Score: 276.2 bits (705), Expect = 2.0e-74 Identity = 125/157 (79.62%), Postives = 141/157 (89.81%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. TAIR10
Match: AT3G03200.1 (NAC domain containing protein 45) HSP 1 Score: 270.0 bits (689), Expect = 1.4e-72 Identity = 129/199 (64.82%), Postives = 154/199 (77.39%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. TAIR10
Match: AT1G54330.1 (NAC domain containing protein 20) HSP 1 Score: 255.4 bits (651), Expect = 3.7e-68 Identity = 117/157 (74.52%), Postives = 132/157 (84.08%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. Swiss-Prot
Match: sp|Q9FFI5|NAC86_ARATH (NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 3.6e-73 Identity = 125/157 (79.62%), Postives = 141/157 (89.81%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. Swiss-Prot
Match: sp|A4VCM0|NAC45_ARATH (NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.6e-71 Identity = 129/199 (64.82%), Postives = 154/199 (77.39%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. Swiss-Prot
Match: sp|Q9LS24|NAC96_ARATH (NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 9.6e-58 Identity = 108/192 (56.25%), Postives = 140/192 (72.92%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. Swiss-Prot
Match: sp|O49697|NAC71_ARATH (NAC domain-containing protein 71 OS=Arabidopsis thaliana OX=3702 GN=NAC071 PE=2 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 4.5e-55 Identity = 100/156 (64.10%), Postives = 123/156 (78.85%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. Swiss-Prot
Match: sp|Q84K00|NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana OX=3702 GN=NAC078 PE=2 SV=2) HSP 1 Score: 211.8 bits (538), Expect = 8.4e-54 Identity = 93/153 (60.78%), Postives = 118/153 (77.12%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. TrEMBL
Match: tr|A0A0A0LVE2|A0A0A0LVE2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032410 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 1.5e-132 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. TrEMBL
Match: tr|A0A1S3AYC8|A0A1S3AYC8_CUCME (NAC domain-containing protein 86 OS=Cucumis melo OX=3656 GN=LOC103484068 PE=4 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 2.6e-132 Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. TrEMBL
Match: tr|U5FPE3|U5FPE3_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G030200v3 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 2.0e-108 Identity = 190/248 (76.61%), Postives = 215/248 (86.69%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. TrEMBL
Match: tr|A0A2P5CQG0|A0A2P5CQG0_9ROSA (NAC domain containing protein OS=Trema orientalis OX=63057 GN=TorNAC16 PE=4 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 5.8e-108 Identity = 194/249 (77.91%), Postives = 210/249 (84.34%), Query Frame = 0
BLAST of CsaV3_1G005200 vs. TrEMBL
Match: tr|A0A068TRH5|A0A068TRH5_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022769001 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 2.2e-107 Identity = 188/248 (75.81%), Postives = 209/248 (84.27%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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