CsaV3_1G004760 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G004760
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 3017986 .. 3018444 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCACAAACGCTCTTCTTCGTTCCATTTCACCATTGTCATAACTGTTAGCGTTCCTCCGTCTCCATTAAAGCCCACGCAGACTGCTCCAATCAATCTTCTTTGCATAATATTATGTTACAGATACTCTCCTAGCGCACCGCAAAAACCTACCCATCTCTCTTCGCGGTATGTCCCTTTCTTTTTCTTCACTTTTCTGTCCACCTGGTAGATCTGCGTTTTTCACTTCCATTTTTCTACAGATCTTGTTCACTGTATTCTTCAATTACTTTTGCTTCTTTTTTCTTTCTGCTCATTTTTCAATTCTGCTGCTTCATGCTTTCTTGTTTCTAATTCATTATAATGAATGAATTACGCCACGCCCGAATTTGGTGATGCTTGATCAATTTCTATTTGTTCTGCTAGCACCGTCATGTTTCTTCGTAGTTTATTCCCCTACTCTTTTTTTTTTTTTTTT

mRNA sequence

ATGACTCACAAACGCTCTTCTTCGTTCCATTTCACCATTGTCATAACTGTTAGCGTTCCTCCGTCTCCATTAAAGCCCACGCAGACTGCTCCAATCAATCTTCTTTGCATAATATTATGTTACAGATACTCTCCTAGCGCACCGCAAAAACCTACCCATCTCTCTTCGCGGTATGTCCCTTTCTTTTTCTTCACTTTTCTGTCCACCTGGTAG

Coding sequence (CDS)

ATGACTCACAAACGCTCTTCTTCGTTCCATTTCACCATTGTCATAACTGTTAGCGTTCCTCCGTCTCCATTAAAGCCCACGCAGACTGCTCCAATCAATCTTCTTTGCATAATATTATGTTACAGATACTCTCCTAGCGCACCGCAAAAACCTACCCATCTCTCTTCGCGGTATGTCCCTTTCTTTTTCTTCACTTTTCTGTCCACCTGGTAG

Protein sequence

MTHKRSSSFHFTIVITVSVPPSPLKPTQTAPINLLCIILCYRYSPSAPQKPTHLSSRYVPFFFFTFLSTW
BLAST of CsaV3_1G004760 vs. NCBI nr
Match: KGN63919.1 (hypothetical protein Csa_1G025990 [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-24
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0

Query: 1  MTHKRSSSFHFTIVITVSVPPSPLKPTQTAPINLLCIILCYRYSPSAPQKPTHLSSR 58
          MTHKRSSSFHFTIVITVSVPPSPLKPTQTAPINLLCIILCYRYSPSAPQKPTHLSSR
Sbjct: 1  MTHKRSSSFHFTIVITVSVPPSPLKPTQTAPINLLCIILCYRYSPSAPQKPTHLSSR 57

BLAST of CsaV3_1G004760 vs. TrEMBL
Match: tr|A0A0A0LSE9|A0A0A0LSE9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025990 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-24
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0

Query: 1  MTHKRSSSFHFTIVITVSVPPSPLKPTQTAPINLLCIILCYRYSPSAPQKPTHLSSR 58
          MTHKRSSSFHFTIVITVSVPPSPLKPTQTAPINLLCIILCYRYSPSAPQKPTHLSSR
Sbjct: 1  MTHKRSSSFHFTIVITVSVPPSPLKPTQTAPINLLCIILCYRYSPSAPQKPTHLSSR 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN63919.12.2e-24100.00hypothetical protein Csa_1G025990 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LSE9|A0A0A0LSE9_CUCSA1.5e-24100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025990 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G004760.1CsaV3_1G004760.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None