CsaV3_1G004060 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTAAAAGTGATGAATATATAAATCCTCTATTATCTCAGCAACCATTGATATCTACAATCTCTTTTTCCTTCTCTCTCTCTCTGCTTCGGTTTCTCCTTTCATGTCTACGGTATGCTCAAACCCTAATTCTAAGTCCTCATCACTTTTTCATTTTTGCTGTTCAATTCATACTTACTTACACAACAAATATATTTTAACTTTTTTCTTTTCTCACTTTAGTTGTTCTTCATCATTGCTTTCTCTAAATTTCAATTTATGTGTACCTTCTTTTGATGATAAATTATAAACGAGTATATAAATGAGTACTTTTGGAAACGAAAGAACTAAGTTTAGACCAAAAAGAGTTATATGACTGAATTTTATACTATATTTAGCTCTAATTTAAGAAGATATATATAAACTTGACTCATTTTTATTTTTGAGGAAGAAGATCATGGAGAGAAAAGGAAAAATAAAAAGAGGAAAACAAAGTAAAAGTAAAATAATATTAAAAGAATAATTTGTTTTTAACAATATTTCATTTTTTCTATATTATATAAGGATGTAATAAAATAAACTAATAATTGAAACAAAAATTAAATAAGTTCATCAACTTTCAATTTCATGTCAATTTAAGATGAGATGTTCGTATACGTCTGTCTATTGTTTCCAACTTTAGTATTTTACTTTTTCAAAAATCAATTTTGTATCAAATAAAGAAATAATAATACATTATTCTTCAACTCTCAATTTTGTATTTTATAAATTCCTCTAACTATATTCAATATTTTTTAAACTAAACAAATAGCATGAAATTAAATTTTATTTGTTTAGCAAATTAAAAAATATTAGATATTGAATTGTAATATAAAAAAAAATACTTTTTAATCTAAAAAGATCCAAAAATTTCAATTTCAAAGTTTTAAGGACTAAATTACAAGTTTAAAAATTAATTTAAAAAAAAACTAATATTATTACAATAGTAAAAGTAAAGGTTCTTCATATAATATTCAATATATAGTGGCCCTATAACATTATTATTACTACTACTACTATTATTATTCGTTTGATATAATTATATTGTTTCATCCCCCCTTTTTGTAATTAGTGCCCTCTATTATTCTTTTAATTACTTGTAATTTTAGAAATTAATGTATATGTGGACATCAAGTATTTACATTATTGAAGTTTTTCCCATTAGAGAGTTAAATACTATTTAAAAATTTTCCTCTATTTATCATAGTTAATAATAATATTTTTGATGCGATAATTAGTGACCTTCTACCTTGTTTTACTATTTTGTTATTTTTTCAGATAAAAACAATGTTATTCCATCATTGGTTTCTCCAATTTACACTCATAGTGACACTATTCCTAAACTTGGAAGCCATTCAAATAAACCACCAAACCCTAAAGACCCAATCTTTTCTCTCCCCATTATTCACTTTAACTCCTGGCTCAGTAATTGAAAAATTCTACTACAATCTCAACTTTCCCAAAGGCCATATTGCAATAAAGAGCTTTGATGCTGAAGTTGTCGATGAACAAGGTAACCCCGTCTCGCTTTTCGACACATATCTCCATCATTGGACACTCGTAAGATATTACCAACACAACAAAACCACAACAACAAATCATACAACAAATACAAACTCTATTATTATCGCGGGTAATAATGGAGTTTGCCAACCAAATACATTATCGTATTTTTATGGTATGGGAACCGAAGCGAGGAAAACATCAAATTTTCTTCCTGACCCATATGGAATTGAAGTTGGGAATGAAAAGGAAGTTCCTTTAGGGTTTGAAGAGAAGTGGGTTCTTAATGTTCATGCCATTGATACTAGAGGTGTGGTGGATAGAGTTGGATGTCTTGAGTGTAAATGTAGTTTGTATGATGTTAGCAAAGATGAATTGGATGATGATTATATAGGAGGATTTAAATGTTGTTATGATAAAGCTCAATGTAAAGTGAGGGAAGGTTATAATGGAGAGGAAAGGAATTTGTATATGAAATATACAGTGCAATGGGTTGATTGGGATGATGATTTTGTGATTCCTGTTAAAGTTTATGTAATTGATGTGACTGATACTTGGAAGCCGTCGATGGACTCATCGGGATTAATATCTCAAGAACATGACTGTAAGGTACGTCATCAATTTAACTACATTGATCTCTCGTTAATTTCGTAATTATTTTGGCTATGATTTTAGTGACTTTAACTTCTCTGTGCATATGCACATAGGTTGAGTATGATGTAGAATCTTGCTCCCTCAAAAACAAGTTGCATGGGAAGTGTAATGCTAACAAAAGGTCAAAGGTGATGTTTCAAGACACTGGATTCATTGTGTATGGAGCGGCTCATCAACACATTGGTGCAACCGGTGCAACCCTCTACGGAGAGGTATATAATAATCTAAAATCCATTATATATACTTGGTTTATAACCAAATGATTTATTTTGATCTATACACACATTCAATTATCTTTAAACGGTTAAGTTATACGTTCTACGACATTGTAAAACAGGATGGAAGAGTTTTATGTTCCTCGTCACCAATATATGGAGAAGGAGACGAAATAGGAAATGAAGAAGGATATATTGTTGGAATGTCAACTTGTTATCCAAAATTAGGGGATGTGAAGATTAATAAAGGAGAAATAGGGAGTTTTGTATCAAAGTATGATCCTACACAAAACCACACAGGTGTTATGGGTATCTTTAGTATTGTGGTTGCTACCAAATTACCTAACTCATTGTCTCACATGGAAGTATGAGCAATAAATCTTGGTTAGTCACATCCTAAAGAAATTAAATAATTCATGTGAAACTTATTATTGTATTCACATATATGATATTTTGTGTAAAATTTGGCTTGTGTTTAATAGTATCTATATATGTA ATGTCTACGATAAAAACAATGTTATTCCATCATTGGTTTCTCCAATTTACACTCATAGTGACACTATTCCTAAACTTGGAAGCCATTCAAATAAACCACCAAACCCTAAAGACCCAATCTTTTCTCTCCCCATTATTCACTTTAACTCCTGGCTCAGTAATTGAAAAATTCTACTACAATCTCAACTTTCCCAAAGGCCATATTGCAATAAAGAGCTTTGATGCTGAAGTTGTCGATGAACAAGGTAACCCCGTCTCGCTTTTCGACACATATCTCCATCATTGGACACTCGTAAGATATTACCAACACAACAAAACCACAACAACAAATCATACAACAAATACAAACTCTATTATTATCGCGGGTAATAATGGAGTTTGCCAACCAAATACATTATCGTATTTTTATGGTATGGGAACCGAAGCGAGGAAAACATCAAATTTTCTTCCTGACCCATATGGAATTGAAGTTGGGAATGAAAAGGAAGTTCCTTTAGGGTTTGAAGAGAAGTGGGTTCTTAATGTTCATGCCATTGATACTAGAGGTGTGGTGGATAGAGTTGGATGTCTTGAGTGTAAATGTAGTTTGTATGATGTTAGCAAAGATGAATTGGATGATGATTATATAGGAGGATTTAAATGTTGTTATGATAAAGCTCAATGTAAAGTGAGGGAAGGTTATAATGGAGAGGAAAGGAATTTGTATATGAAATATACAGTGCAATGGGTTGATTGGGATGATGATTTTGTGATTCCTGTTAAAGTTTATGTAATTGATGTGACTGATACTTGGAAGCCGTCGATGGACTCATCGGGATTAATATCTCAAGAACATGACTGTAAGGTTGAGTATGATGTAGAATCTTGCTCCCTCAAAAACAAGTTGCATGGGAAGTGTAATGCTAACAAAAGGTCAAAGGTGATGTTTCAAGACACTGGATTCATTGTGTATGGAGCGGCTCATCAACACATTGGTGCAACCGGTGCAACCCTCTACGGAGAGGATGGAAGAGTTTTATGTTCCTCGTCACCAATATATGGAGAAGGAGACGAAATAGGAAATGAAGAAGGATATATTGTTGGAATGTCAACTTGTTATCCAAAATTAGGGGATGTGAAGATTAATAAAGGAGAAATAGGGAGTTTTGTATCAAAGTATGATCCTACACAAAACCACACAGGTGTTATGGGTATCTTTAGTATTGTGGTTGCTACCAAATTACCTAACTCATTGTCTCACATGGAAGTATGA ATGTCTACGATAAAAACAATGTTATTCCATCATTGGTTTCTCCAATTTACACTCATAGTGACACTATTCCTAAACTTGGAAGCCATTCAAATAAACCACCAAACCCTAAAGACCCAATCTTTTCTCTCCCCATTATTCACTTTAACTCCTGGCTCAGTAATTGAAAAATTCTACTACAATCTCAACTTTCCCAAAGGCCATATTGCAATAAAGAGCTTTGATGCTGAAGTTGTCGATGAACAAGGTAACCCCGTCTCGCTTTTCGACACATATCTCCATCATTGGACACTCGTAAGATATTACCAACACAACAAAACCACAACAACAAATCATACAACAAATACAAACTCTATTATTATCGCGGGTAATAATGGAGTTTGCCAACCAAATACATTATCGTATTTTTATGGTATGGGAACCGAAGCGAGGAAAACATCAAATTTTCTTCCTGACCCATATGGAATTGAAGTTGGGAATGAAAAGGAAGTTCCTTTAGGGTTTGAAGAGAAGTGGGTTCTTAATGTTCATGCCATTGATACTAGAGGTGTGGTGGATAGAGTTGGATGTCTTGAGTGTAAATGTAGTTTGTATGATGTTAGCAAAGATGAATTGGATGATGATTATATAGGAGGATTTAAATGTTGTTATGATAAAGCTCAATGTAAAGTGAGGGAAGGTTATAATGGAGAGGAAAGGAATTTGTATATGAAATATACAGTGCAATGGGTTGATTGGGATGATGATTTTGTGATTCCTGTTAAAGTTTATGTAATTGATGTGACTGATACTTGGAAGCCGTCGATGGACTCATCGGGATTAATATCTCAAGAACATGACTGTAAGGTTGAGTATGATGTAGAATCTTGCTCCCTCAAAAACAAGTTGCATGGGAAGTGTAATGCTAACAAAAGGTCAAAGGTGATGTTTCAAGACACTGGATTCATTGTGTATGGAGCGGCTCATCAACACATTGGTGCAACCGGTGCAACCCTCTACGGAGAGGATGGAAGAGTTTTATGTTCCTCGTCACCAATATATGGAGAAGGAGACGAAATAGGAAATGAAGAAGGATATATTGTTGGAATGTCAACTTGTTATCCAAAATTAGGGGATGTGAAGATTAATAAAGGAGAAATAGGGAGTTTTGTATCAAAGTATGATCCTACACAAAACCACACAGGTGTTATGGGTATCTTTAGTATTGTGGTTGCTACCAAATTACCTAACTCATTGTCTCACATGGAAGTATGA MSTIKTMLFHHWFLQFTLIVTLFLNLEAIQINHQTLKTQSFLSPLFTLTPGSVIEKFYYNLNFPKGHIAIKSFDAEVVDEQGNPVSLFDTYLHHWTLVRYYQHNKTTTTNHTTNTNSIIIAGNNGVCQPNTLSYFYGMGTEARKTSNFLPDPYGIEVGNEKEVPLGFEEKWVLNVHAIDTRGVVDRVGCLECKCSLYDVSKDELDDDYIGGFKCCYDKAQCKVREGYNGEERNLYMKYTVQWVDWDDDFVIPVKVYVIDVTDTWKPSMDSSGLISQEHDCKVEYDVESCSLKNKLHGKCNANKRSKVMFQDTGFIVYGAAHQHIGATGATLYGEDGRVLCSSSPIYGEGDEIGNEEGYIVGMSTCYPKLGDVKINKGEIGSFVSKYDPTQNHTGVMGIFSIVVATKLPNSLSHMEV
BLAST of CsaV3_1G004060 vs. NCBI nr
Match: XP_004137324.1 (PREDICTED: uncharacterized protein LOC101215981 [Cucumis sativus]) HSP 1 Score: 816.6 bits (2108), Expect = 3.8e-233 Identity = 416/416 (100.00%), Postives = 416/416 (100.00%), Query Frame = 0
BLAST of CsaV3_1G004060 vs. NCBI nr
Match: XP_008453444.1 (PREDICTED: uncharacterized protein LOC103494150 [Cucumis melo]) HSP 1 Score: 758.1 bits (1956), Expect = 1.6e-215 Identity = 363/414 (87.68%), Postives = 374/414 (90.34%), Query Frame = 0
BLAST of CsaV3_1G004060 vs. NCBI nr
Match: KGN43818.1 (hypothetical protein Csa_7G069440 [Cucumis sativus]) HSP 1 Score: 512.3 bits (1318), Expect = 1.5e-141 Identity = 242/431 (56.15%), Postives = 308/431 (71.46%), Query Frame = 0
BLAST of CsaV3_1G004060 vs. NCBI nr
Match: XP_011658854.1 (PREDICTED: uncharacterized protein LOC101210001 [Cucumis sativus]) HSP 1 Score: 511.1 bits (1315), Expect = 3.4e-141 Identity = 240/431 (55.68%), Postives = 307/431 (71.23%), Query Frame = 0
BLAST of CsaV3_1G004060 vs. NCBI nr
Match: XP_023515680.1 (uncharacterized protein LOC111779774 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 510.4 bits (1313), Expect = 5.9e-141 Identity = 239/412 (58.01%), Postives = 304/412 (73.79%), Query Frame = 0
BLAST of CsaV3_1G004060 vs. TAIR10
Match: AT5G61820.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 369.0 bits (946), Expect = 3.8e-102 Identity = 188/397 (47.36%), Postives = 246/397 (61.96%), Query Frame = 0
BLAST of CsaV3_1G004060 vs. TrEMBL
Match: tr|A0A1S3BVP7|A0A1S3BVP7_CUCME (uncharacterized protein LOC103494150 OS=Cucumis melo OX=3656 GN=LOC103494150 PE=4 SV=1) HSP 1 Score: 758.1 bits (1956), Expect = 1.1e-215 Identity = 363/414 (87.68%), Postives = 374/414 (90.34%), Query Frame = 0
BLAST of CsaV3_1G004060 vs. TrEMBL
Match: tr|A0A0A0K2U1|A0A0A0K2U1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G069440 PE=4 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 1.0e-141 Identity = 242/431 (56.15%), Postives = 308/431 (71.46%), Query Frame = 0
BLAST of CsaV3_1G004060 vs. TrEMBL
Match: tr|A0A1S3C023|A0A1S3C023_CUCME (uncharacterized protein LOC103495342 OS=Cucumis melo OX=3656 GN=LOC103495342 PE=4 SV=1) HSP 1 Score: 503.1 bits (1294), Expect = 6.2e-139 Identity = 244/434 (56.22%), Postives = 308/434 (70.97%), Query Frame = 0
BLAST of CsaV3_1G004060 vs. TrEMBL
Match: tr|A0A0A0LS56|A0A0A0LS56_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024275 PE=4 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 7.1e-127 Identity = 234/422 (55.45%), Postives = 294/422 (69.67%), Query Frame = 0
BLAST of CsaV3_1G004060 vs. TrEMBL
Match: tr|A0A2P4N3G1|A0A2P4N3G1_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_27513 PE=4 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 1.0e-125 Identity = 211/391 (53.96%), Postives = 270/391 (69.05%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |