CsaV3_1G003970 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTACAAGTTACCAATTATTTTCCCATTTAAACTTTCTTCATAATTAACATCTTAAAAACGCCTATATACCATCAAACGCTTTCTCTAATCCCTTTAACAAACTTAAATATTTAAATCAAAATTTATGAATCCACACCTCATAATTCTATTTGTTGTAGAAATAAAAGTTGTGAAGATGGAGGAGAAGATTAGAGCAAAAATGTTAGAGAGGGTTGGAGGTAAAAGAAAAAAAAAGGGAAGTTACTTAAGAGCAATTAATAGTTAAGATTACAAAAAGGGATGTTAAGGAGAGGTATCCGTGTTGTGCTTTCCTCCTCTGTTTCTCATCATCTCTCTTACCTTTTCAGTTCTTCATCTTTTTCTTTGAAAAACAGAGCACACAAATTACTCATTCTTCATTCTCCATTCTCCATTCTCCATTCTCCATTCCCATTTCATTCAATGACGATCTCTTCCTCCAACCCCAAACTCCATATCCATTTCAAATCCTTCTTCTCTCCCTTCCTCCTCTTCTCCGCCGGCCTCGCTGCCGGCTTCACTCTTACTCTCTTCATCTTCCCTTTCCCTTTCTTCCAATTCTCCTCCTCTCTCTCCCTCCCTTTCACCTTCAACCAACTCCAACTCTCTCCCTCCCCTCTCCCCTCGTCTCCACCACCACCTCCGCCACCGCCCTCCCGTGTCGGGTTGAAGGAGTTTTTAAACCCTCCTCCCGTACTCCACGACATGACGGAGGAAGAGCTTTTATGGAGGGCCTCACTTGTTCCGCGCCGGATTCCGAAATTACCTTCGACGGAAACGACGACGTCAACGCGGAAGATCGCATTCTTGTTTCTGACGAAAGATGGAGTCAGTTTGGCTCCGCTTTGGGAACTGTTCTTTAAAGGGTACGCTGGACTGTACTCCATTTACGTTCATCGGACTCCTTCCTCCTCCTCTACCTCCACCGTCGATTCCTCCTCTGTTTTCTACGGTCGCTCAATCCCCAGTAAGGTTTGTTCGCAATCACTACTTTTCTTGACTCTCATGCTTTCAAATTAATTTCTATATTTTCATTACATTTTAAATTTAGTGGCAAATTCAATCCCATTAATTTCTATGTTTAATGAAAACTTTATCAAATTATATGAACTATTCATGAGATTTTATCACATTATTACTCAATCATTAGCACTTTTAAAATTATATGAACTCAGTTTTAATTTTTTACTATTAGGACATTTTAAAATCTATTCATGGTTAATTCTTGCATTTACTCCTATTAATTATTGTCTTTATTATTGTTATTATTATTTGTCATGTATGTTTTAATTAAGTAGATTTTTTACTAGTGATTTCTTAATCAATATCATATCCTTCCAACTTTATTTCTGGTGCCAAACCTTAATTAAAAACATATATCAGTAATCTCTAAACAACTATTAAATGTAAAAACCAAAATAATAATAATAACTGTTAAATGAGATAGAAATAAATTAATGATCTTTTCATTTTTCCTTACGTTACTGTGTGAAGTTTTGTTAATGGAAAACTTTGTCTCTCTTTAGTTATTTATGTTTAGGTCAAAATTAAAAACTTTTTATATTATTGAATTTTGCAGTCTTCTTGGCCATTCCATTTTTTTAAAAAATAGCTAATATGTTTTTACATTTAATTTATTTGTCATATCTTAGATTTTTTTTTAAAAAAATTTGTATATCTTTCTATACTTTTAAAATTAATGTACATTGAGTTTGCTTGCAATTTGAGCCATGCACAATCACAGTACAGTTGGCTTTTGAAGAAAATGAAAGCTGTATATATATATATGTATACACACAGATATAAATGATGAGTTTTCCTCATTTTGGTAATTTATTAAAATAGATAAACACTTTATAGAGTAATTGTATTTATTATATCAACCAATATTAGCTTTATTTCAACCTATGAAATATTCTAAAAGTAAATAATGTCGGTTGAAATTAACAATCTTTCTGTCCAAACCTTTATGATTTCAAAGCTTTCTTTTTTAATAGTAATAATAACAATAAACCCTTTTAGTTTAATTTCCTTTTGTGGGATATTAACCTCACTTAACTCTTATTTATTTGTTTTCTTATATACGATTTAATGTAATAACATGCACATACGTTATGTTCTTTTAATCATATCCCACGTACTGTATTAATTTGGGGGGAGATATATATACGCTTTACATGCAATTGTTTGAAGGGTATTTGTGATGGAATTTCCCTTTCTGTTTTGAGATTCCAATTTCCCAGTTGATCATCAAACCTTTTTTGCATTCTTTTCTTTATGCCTTCTTCCTTTGTCATGTGAAAATTTATATTTCACCCAAAGACAAGTATCCAACCCTTTTTTTATTTCCTTTCTTTCTTTCTTCCCCCTTTTTCCTTGCTTCTTGTTGGGAGGAAAGAAATAATACACAAGAAATGGGCATTGGCACCCTTATGGCTTGGCCTTTATCATCATTGGTAAAGAGTCTCACGTGTCTTATAATAGGTATAATATATGTTTGATGCTAGTTTGAGTTAGGCTTGTTTTAACAAAAATTAAGACTTAATATATTTCTTCATTCGAAAAGTACTACACTGATATAAATTATTTAGAATTTTGAATGGAACTAAAGACATATAAAGATAATGTGGTATTGCATATCTTTGTTTTTATTCAAAATTTTAAAGTTCTTATACTCTTAAGAGTTGTTTTTAGACAAAGTCAAAAGTAATATTACAATTTGAAATAAAACAAAGTTTGACTAAGTTTTTTTTTTGTTAATTTATCATAAAAATATGTCAAAGTTTTCCTTATTGTTAGGGTAAGAAATTATTTGATGACTTGTTGATTGGGCAAGAGATAATTTTAGTAGATCAAGAGTTCATAAATCATAGTAGGTGTCATGAGTTGTCTTCTTGATCATTTCAAATTGCAAAAGTAGTATACATATGTAAAATATGTCAACAATCATAACTTAAATCTTTCTTTTTTTAGTAAATTAGAATATCACATTAAACCTTTTTCAAGTATACATGAAATAACACGATGAAGATCTAAATCATAAAACTAGATCGAAAGTCTAAAAGATTTATACTTGTTGGATGGTTTTTAGGGAGTGAAGTGGGGAGAACCAAGCATGATGGAGGCAGAGAGAAGGCTACTAGCAAATGCATTATTAGATTTCTCCAACGAAAGATTCATCCTTCTATCAGAATCATGCATTCCACTCTTCAACTTCTCCACCGTTTACAATTACTTAATGGGCTCAAAATCCACATTCATTGAGGCCTATGACCTTCCAGGCCCAGTGGGCCGAGGCCGCTACAACCCAAAAATGCGGCCAATAATCAAGCTCCATCAATGGCGCAAGGGTTCCCAATGGTTCGAAATGGACCGAACCATCGCCTCCCAAGTCATCTCCGACCAAAAGTATTTCTCCGTCTTCCAAAAATTTTGCAAACCGTCTTGCTACATGGACGAGCACTACCTCCCCACCTTTGTTGGAATCCGATTCCCTAAGACCAACTCCAACCGGACCTTGACTTGGGTCGATTGGTCCAGAGGCGGCGCTCACCCGACCCGGTTCGTTAGAACCGATGTCACCCTTGAATTGCTTAAGAGGCTGAGGAATGGTGGCCACTGCGAGTATAATGGAGTTAAAACTAATCTCTGTCATTTGTTTGCTAGGAAGTTCATGGCTAATTCTTTGAATAGATTACTTATGTTTGCTCCTAAGCTCATGCATTTTAATCGTTAGGTGTGGCGTAAACTCATTCCCTTTTGAATTTTGAGATTATATGATTCTTTTATATGTGATTTCATAAGATGGGGTTCGGTAAAAATCTGCCCTTTATTATGTTCTCTTTTTATAAAGTGTAGTGTTGTAAGTGAACATAAAGAATGAAGAATCAATTCAATAAGTATATAAAAGAAATATATGCCGACCCATCAGTGTAATAGATTGATGAGGAAGATGAAGATGAAGTAGTTGACAAAAGATAAGGGAATAATGGAAGGGATTTAAGAGCTGATGGTTTCATTTGTTGCTGTTGAGGTGTTACTGCTAACCCAAGATACAGACATGGAACTTGGAGACGATCCATAGCCATTCTTTAGCAATACAGCATCGTCTGAAATGTCGGCCTCTCGATCTGTCACCTTCTCGGCGTTTTGTTTCTTTATGATGTTAAGAGTGTCGAGAACTTCCATCATTGTTGGTCTCTCGTCTTTCATACTTTGCAGGCATCGAAACGCCAACTCGGCTACGCTGGTTATCATCTCTTGGATTTTGTAGTCCGATTCGAAACCGAGTGATGGGTCGACGAATTCGTGTAGTGTGCTGTTTTGGATCTTGTTGATGGCCATGTTGAACAGGTTGATCTCTTGTCTATGCCTTGTGATGTCAACAGCAGGCATTGAGGATATCAGTTCAACAAGTACCACACCGAAGCTGAAGACGTCACTTTTGTCAGAGAGTTGGTAGCACTGATGGTACTCTGGATCGACATAGCCAGGAGTGCCTTGTGGAGCGGTTGAAACGTGTGTTACATCGAGTGGGAAGAGACGGGACAATCCGAAATCGGCTACTTTAACGCAGTAGTTGTTGTCGAGGAGAATGTTGTTGGTTTTGACATCTCGGTGGATGATTTCAGAAGCATGGAGATACACCAAAGCACTTGCAGTCTCTATAGCAATCTTCATTCTTGTACACCATGGAAGCTTGCCAGACTTTGCTAGTTTTCCATGGAGGTGATCAGCCACCGTGCCATTTGGGACGTATTCGTACACAAGCAGAAGCTCACGGCTACTGCGCGAGGTGCAACCGTAAAGCGAAACAAGGTTGCGGTGACGCAAGCGAGCAAGGATCTCTACCTCATTCATGAACTGCTCAACTCTCTTAAAATTACTCTCAAACAACCGTTTGACAGCAACGGCACGCCCATCCTTTAGTAAACCTAAACAGATACATATATGAACAAAAAAATCAATAAAAAAATAATCACCAACTAATAGTCAAGCATAAATAATGATTCGAACTAGATTTAAATGGTTGCTCTTACCAAAATACACAGTGCCAAAGC ATGTTAAGGAGAGGTATCCGTGTTGTGCTTTCCTCCTCTGTTTCTCATCATCTCTCTTACCTTTTCAGTTCTTCATCTTTTTCTTTGAAAAACAGAGCACACAAATTACTCATTCTTCATTCTCCATTCTCCATTCTCCATTCTCCATTCCCATTTCATTCAATGACGATCTCTTCCTCCAACCCCAAACTCCATATCCATTTCAAATCCTTCTTCTCTCCCTTCCTCCTCTTCTCCGCCGGCCTCGCTGCCGGCTTCACTCTTACTCTCTTCATCTTCCCTTTCCCTTTCTTCCAATTCTCCTCCTCTCTCTCCCTCCCTTTCACCTTCAACCAACTCCAACTCTCTCCCTCCCCTCTCCCCTCGTCTCCACCACCACCTCCGCCACCGCCCTCCCGTGTCGGGTTGAAGGAGTTTTTAAACCCTCCTCCCGTACTCCACGACATGACGGAGGAAGAGCTTTTATGGAGGGCCTCACTTGTTCCGCGCCGGATTCCGAAATTACCTTCGACGGAAACGACGACGTCAACGCGGAAGATCGCATTCTTGTTTCTGACGAAAGATGGAGTCAGTTTGGCTCCGCTTTGGGAACTGTTCTTTAAAGGGTACGCTGGACTGTACTCCATTTACGTTCATCGGACTCCTTCCTCCTCCTCTACCTCCACCGTCGATTCCTCCTCTGTTTTCTACGGTCGCTCAATCCCCAGTAAGGGAGTGAAGTGGGGAGAACCAAGCATGATGGAGGCAGAGAGAAGGCTACTAGCAAATGCATTATTAGATTTCTCCAACGAAAGATTCATCCTTCTATCAGAATCATGCATTCCACTCTTCAACTTCTCCACCGTTTACAATTACTTAATGGGCTCAAAATCCACATTCATTGAGGCCTATGACCTTCCAGGCCCAGTGGGCCGAGGCCGCTACAACCCAAAAATGCGGCCAATAATCAAGCTCCATCAATGGCGCAAGGGTTCCCAATGGTTCGAAATGGACCGAACCATCGCCTCCCAAGTCATCTCCGACCAAAAGTATTTCTCCGTCTTCCAAAAATTTTGCAAACCGTCTTGCTACATGGACGAGCACTACCTCCCCACCTTTGTTGGAATCCGATTCCCTAAGACCAACTCCAACCGGACCTTGACTTGGGTCGATTGGTCCAGAGGCGGCGCTCACCCGACCCGGTTCGTTAGAACCGATGTCACCCTTGAATTGCTTAAGAGGCTGAGGAATGGTGGCCACTGCGAGTATAATGGAGTTAAAACTAATCTCTGTCATTTGTTTGCTAGGAAGTTCATGGCTAATTCTTTGAATAGATTACTTATGTTTGCTCCTAAGCTCATGCATTTTAATCGTTAG ATGTTAAGGAGAGGTATCCGTGTTGTGCTTTCCTCCTCTGTTTCTCATCATCTCTCTTACCTTTTCAGTTCTTCATCTTTTTCTTTGAAAAACAGAGCACACAAATTACTCATTCTTCATTCTCCATTCTCCATTCTCCATTCTCCATTCCCATTTCATTCAATGACGATCTCTTCCTCCAACCCCAAACTCCATATCCATTTCAAATCCTTCTTCTCTCCCTTCCTCCTCTTCTCCGCCGGCCTCGCTGCCGGCTTCACTCTTACTCTCTTCATCTTCCCTTTCCCTTTCTTCCAATTCTCCTCCTCTCTCTCCCTCCCTTTCACCTTCAACCAACTCCAACTCTCTCCCTCCCCTCTCCCCTCGTCTCCACCACCACCTCCGCCACCGCCCTCCCGTGTCGGGTTGAAGGAGTTTTTAAACCCTCCTCCCGTACTCCACGACATGACGGAGGAAGAGCTTTTATGGAGGGCCTCACTTGTTCCGCGCCGGATTCCGAAATTACCTTCGACGGAAACGACGACGTCAACGCGGAAGATCGCATTCTTGTTTCTGACGAAAGATGGAGTCAGTTTGGCTCCGCTTTGGGAACTGTTCTTTAAAGGGTACGCTGGACTGTACTCCATTTACGTTCATCGGACTCCTTCCTCCTCCTCTACCTCCACCGTCGATTCCTCCTCTGTTTTCTACGGTCGCTCAATCCCCAGTAAGGGAGTGAAGTGGGGAGAACCAAGCATGATGGAGGCAGAGAGAAGGCTACTAGCAAATGCATTATTAGATTTCTCCAACGAAAGATTCATCCTTCTATCAGAATCATGCATTCCACTCTTCAACTTCTCCACCGTTTACAATTACTTAATGGGCTCAAAATCCACATTCATTGAGGCCTATGACCTTCCAGGCCCAGTGGGCCGAGGCCGCTACAACCCAAAAATGCGGCCAATAATCAAGCTCCATCAATGGCGCAAGGGTTCCCAATGGTTCGAAATGGACCGAACCATCGCCTCCCAAGTCATCTCCGACCAAAAGTATTTCTCCGTCTTCCAAAAATTTTGCAAACCGTCTTGCTACATGGACGAGCACTACCTCCCCACCTTTGTTGGAATCCGATTCCCTAAGACCAACTCCAACCGGACCTTGACTTGGGTCGATTGGTCCAGAGGCGGCGCTCACCCGACCCGGTTCGTTAGAACCGATGTCACCCTTGAATTGCTTAAGAGGCTGAGGAATGGTGGCCACTGCGAGTATAATGGAGTTAAAACTAATCTCTGTCATTTGTTTGCTAGGAAGTTCATGGCTAATTCTTTGAATAGATTACTTATGTTTGCTCCTAAGCTCATGCATTTTAATCGTTAG MLRRGIRVVLSSSVSHHLSYLFSSSSFSLKNRAHKLLILHSPFSILHSPFPFHSMTISSSNPKLHIHFKSFFSPFLLFSAGLAAGFTLTLFIFPFPFFQFSSSLSLPFTFNQLQLSPSPLPSSPPPPPPPPSRVGLKEFLNPPPVLHDMTEEELLWRASLVPRRIPKLPSTETTTSTRKIAFLFLTKDGVSLAPLWELFFKGYAGLYSIYVHRTPSSSSTSTVDSSSVFYGRSIPSKGVKWGEPSMMEAERRLLANALLDFSNERFILLSESCIPLFNFSTVYNYLMGSKSTFIEAYDLPGPVGRGRYNPKMRPIIKLHQWRKGSQWFEMDRTIASQVISDQKYFSVFQKFCKPSCYMDEHYLPTFVGIRFPKTNSNRTLTWVDWSRGGAHPTRFVRTDVTLELLKRLRNGGHCEYNGVKTNLCHLFARKFMANSLNRLLMFAPKLMHFNR
BLAST of CsaV3_1G003970 vs. NCBI nr
Match: XP_004137544.2 (PREDICTED: uncharacterized protein LOC101209845 [Cucumis sativus]) HSP 1 Score: 793.9 bits (2049), Expect = 2.9e-226 Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. NCBI nr
Match: KGN63836.1 (hypothetical protein Csa_1G024220 [Cucumis sativus]) HSP 1 Score: 706.4 bits (1822), Expect = 6.1e-200 Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. NCBI nr
Match: XP_008453432.1 (PREDICTED: uncharacterized protein LOC103494140 [Cucumis melo]) HSP 1 Score: 581.6 bits (1498), Expect = 2.2e-162 Identity = 282/303 (93.07%), Postives = 293/303 (96.70%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. NCBI nr
Match: XP_022988481.1 (uncharacterized protein LOC111485710 [Cucurbita maxima]) HSP 1 Score: 537.0 bits (1382), Expect = 6.4e-149 Identity = 316/397 (79.60%), Postives = 346/397 (87.15%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. NCBI nr
Match: XP_022134723.1 (uncharacterized protein LOC111006926 [Momordica charantia]) HSP 1 Score: 471.9 bits (1213), Expect = 2.5e-129 Identity = 226/302 (74.83%), Postives = 256/302 (84.77%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. TAIR10
Match: AT1G68390.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 369.8 bits (948), Expect = 2.4e-102 Identity = 178/318 (55.97%), Postives = 234/318 (73.58%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. TAIR10
Match: AT5G11730.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 345.1 bits (884), Expect = 6.4e-95 Identity = 166/315 (52.70%), Postives = 225/315 (71.43%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. TAIR10
Match: AT1G73810.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 340.9 bits (873), Expect = 1.2e-93 Identity = 169/309 (54.69%), Postives = 214/309 (69.26%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. TAIR10
Match: AT3G21310.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 329.7 bits (844), Expect = 2.8e-90 Identity = 164/318 (51.57%), Postives = 214/318 (67.30%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. TAIR10
Match: AT1G51770.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 328.9 bits (842), Expect = 4.8e-90 Identity = 169/322 (52.48%), Postives = 210/322 (65.22%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. TrEMBL
Match: tr|A0A0A0LUY5|A0A0A0LUY5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024220 PE=4 SV=1) HSP 1 Score: 706.4 bits (1822), Expect = 4.0e-200 Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. TrEMBL
Match: tr|A0A1S3BX15|A0A1S3BX15_CUCME (uncharacterized protein LOC103494140 OS=Cucumis melo OX=3656 GN=LOC103494140 PE=4 SV=1) HSP 1 Score: 581.6 bits (1498), Expect = 1.5e-162 Identity = 282/303 (93.07%), Postives = 293/303 (96.70%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. TrEMBL
Match: tr|A0A2I4FFX6|A0A2I4FFX6_9ROSI (uncharacterized protein LOC108998451 OS=Juglans regia OX=51240 GN=LOC108998451 PE=4 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 6.5e-126 Identity = 220/318 (69.18%), Postives = 260/318 (81.76%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. TrEMBL
Match: tr|A0A2P4IM92|A0A2P4IM92_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_46402 PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 3.2e-125 Identity = 222/318 (69.81%), Postives = 261/318 (82.08%), Query Frame = 0
BLAST of CsaV3_1G003970 vs. TrEMBL
Match: tr|I1L4B0|I1L4B0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100803748 PE=4 SV=2) HSP 1 Score: 454.9 bits (1169), Expect = 2.1e-124 Identity = 219/318 (68.87%), Postives = 257/318 (80.82%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |