CsaV3_1G003540 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACCAAAACGATGACCATTAATTTGTGTTTAATTCTGCTGTCATTTGGCGTAAGTTCTACCACAGCAACCAAATCCTACGCAAGAAACATCGACCCAAAATCCTTAAAACTCAACAACAAACAACACCAAAAACTTACACACCTTCGCCTTTATTGGCACGACACCGTCAGCGGCGGCAGACCCTCCAGCGTCGCAGTTCTTCCGCCGCTCAACAACGTCACCGAGTTCGGTCAAGTCAACATGTTTGACAACCCTTTGACTGCGGGCCCTGAATTGGGCTCGCAATTGGTGGGTCGATCTCAAGGCTTCTATGCAGGTGCAGCCCAAGATCAAATTGGACTTTTGATGGCTATGAACTTTGCTTTTACTCATGGCAAATATAAAGGTAGCTCCTTAACTGTGATTGGTCGGAATCACATCTCCGACGCCGTCAGGGAAATGCCGGTGGTCGGCGGAAGTGGTAAGTTTAGATTTGGTAGTGGCTATGCTTTGGCGAAAACTCATTGTTTAGATCCTGTCACGTTTGATGCTGTTGTTGAGTATAATGTTTATGTGTTGCATTATTGATTGTCTTTTTTCCTTCCCTTCGACAGCAGCGTTTACTTGTAATATTTGCTGATCGTTTAAAGGCTTATGAATGAAGAATAATTTTGCGTTTATGTAAATTGAGTTAGCAACATAGGTATATGACATAAAATGAAGAGGTTAGAAGTTCAAATCACACTTTGTATCGTTAGTTTTCTATATTATTTATAAAATCTAACGTCAAAGAACCTAACCAAGTTTGATTTTATAGTATTTACCACCGTTGTAGGTTCCTTGTTGTATATGACATTGGATATTTCACCCTCAATTGAATATTGAAAAACACGTATGAACATAATTCAAACATGATATTAACAACAAGAATATTCTAACTTATTTAAGATGATTTAAGAAGTTTACATGAATTTATTTATTTACTTTTTAGGAAGGAATGTCAGATTGAAATTTACACCATAGATTGATATCAACGACCAATGTTTTCCAATTGTGCCATCAACGAACGTGGGAGAAAAAAATGACCTCAGCTTACAAAACCTCTCTCTTTAGCTTTCATCAATTAGAGAAAAAATAAAAGAAAAGAAAAGGAGAGAAAAAGCCCACAAGCTTGACATTCATCAAATTCACCACCTCCAAACAGTCATACCACCATAAATGTTTTATCATATGAACTAAAAAAATATCATTCTCAAACGCTATTGAAGTGAGCCATTTGGCATTCTCATTGGTTGATATATAGAGCAAAATGTAAAAATGGAATATCAATATAACCAATCATTCTTCACATTAGCAAATAATACTGAATCAACCCTTTGGCGGGCAATACAAACATTAATACAATAGTTGAAGACCTTGTAGGATCCAAACTTCTTGTTAGAAAGCCCTATATCTTTATTCATATGGAAACTTTTGAGTATGTTGAGGGTTGCCCACATAAAACCTCAAATAACTTAAACATCATAGTGTAATCAGCTAGGCACCACACTGGTGCAGATACTCATGCATAGTTCAGCACCAACAACATTTCTAATCGAGAGTGGTCAAGACCAACGTATGAATTTCTTGCAACAGTAG ATGGCAACCAAAACGATGACCATTAATTTGTGTTTAATTCTGCTGTCATTTGGCGTAAGTTCTACCACAGCAACCAAATCCTACGCAAGAAACATCGACCCAAAATCCTTAAAACTCAACAACAAACAACACCAAAAACTTACACACCTTCGCCTTTATTGGCACGACACCGTCAGCGGCGGCAGACCCTCCAGCGTCGCAGTTCTTCCGCCGCTCAACAACGTCACCGAGTTCGGTCAAGTCAACATGTTTGACAACCCTTTGACTGCGGGCCCTGAATTGGGCTCGCAATTGGTGGGTCGATCTCAAGGCTTCTATGCAGGTGCAGCCCAAGATCAAATTGGACTTTTGATGGCTATGAACTTTGCTTTTACTCATGGCAAATATAAAGGTAGCTCCTTAACTGTGATTGGTCGGAATCACATCTCCGACGCCGTCAGGGAAATGCCGGTGGTCGGCGGAAGTGGTAAGTTTAGATTTGGTAGTGGCTATGCTTTGGCGAAAACTCATTGTTTAGATCCTGTCACGTTTGATGCTGTTGTTGAGTATAATATACTCATGCATAGTTCAGCACCAACAACATTTCTAATCGAGAGTGGTCAAGACCAACGTATGAATTTCTTGCAACAGTAG ATGGCAACCAAAACGATGACCATTAATTTGTGTTTAATTCTGCTGTCATTTGGCGTAAGTTCTACCACAGCAACCAAATCCTACGCAAGAAACATCGACCCAAAATCCTTAAAACTCAACAACAAACAACACCAAAAACTTACACACCTTCGCCTTTATTGGCACGACACCGTCAGCGGCGGCAGACCCTCCAGCGTCGCAGTTCTTCCGCCGCTCAACAACGTCACCGAGTTCGGTCAAGTCAACATGTTTGACAACCCTTTGACTGCGGGCCCTGAATTGGGCTCGCAATTGGTGGGTCGATCTCAAGGCTTCTATGCAGGTGCAGCCCAAGATCAAATTGGACTTTTGATGGCTATGAACTTTGCTTTTACTCATGGCAAATATAAAGGTAGCTCCTTAACTGTGATTGGTCGGAATCACATCTCCGACGCCGTCAGGGAAATGCCGGTGGTCGGCGGAAGTGGTAAGTTTAGATTTGGTAGTGGCTATGCTTTGGCGAAAACTCATTGTTTAGATCCTGTCACGTTTGATGCTGTTGTTGAGTATAATATACTCATGCATAGTTCAGCACCAACAACATTTCTAATCGAGAGTGGTCAAGACCAACGTATGAATTTCTTGCAACAGTAG MATKTMTINLCLILLSFGVSSTTATKSYARNIDPKSLKLNNKQHQKLTHLRLYWHDTVSGGRPSSVAVLPPLNNVTEFGQVNMFDNPLTAGPELGSQLVGRSQGFYAGAAQDQIGLLMAMNFAFTHGKYKGSSLTVIGRNHISDAVREMPVVGGSGKFRFGSGYALAKTHCLDPVTFDAVVEYNILMHSSAPTTFLIESGQDQRMNFLQQ
BLAST of CsaV3_1G003540 vs. NCBI nr
Match: XP_004138340.1 (PREDICTED: dirigent protein 22 [Cucumis sativus] >KGN63791.1 hypothetical protein Csa_1G015830 [Cucumis sativus]) HSP 1 Score: 373.2 bits (957), Expect = 5.7e-100 Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. NCBI nr
Match: XP_008453355.1 (PREDICTED: dirigent protein 22-like [Cucumis melo]) HSP 1 Score: 345.9 bits (886), Expect = 9.7e-92 Identity = 171/185 (92.43%), Postives = 177/185 (95.68%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. NCBI nr
Match: XP_022921855.1 (dirigent protein 22-like [Cucurbita moschata]) HSP 1 Score: 233.4 bits (594), Expect = 7.0e-58 Identity = 120/185 (64.86%), Postives = 139/185 (75.14%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. NCBI nr
Match: XP_023516897.1 (dirigent protein 22-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 231.5 bits (589), Expect = 2.7e-57 Identity = 119/185 (64.32%), Postives = 138/185 (74.59%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. NCBI nr
Match: XP_022987313.1 (dirigent protein 22-like [Cucurbita maxima]) HSP 1 Score: 229.6 bits (584), Expect = 1.0e-56 Identity = 118/185 (63.78%), Postives = 137/185 (74.05%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. TAIR10
Match: AT1G55210.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 172.9 bits (437), Expect = 2.0e-43 Identity = 86/172 (50.00%), Postives = 117/172 (68.02%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. TAIR10
Match: AT1G58170.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 172.2 bits (435), Expect = 3.5e-43 Identity = 90/180 (50.00%), Postives = 121/180 (67.22%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. TAIR10
Match: AT5G49040.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 162.5 bits (410), Expect = 2.8e-40 Identity = 87/187 (46.52%), Postives = 118/187 (63.10%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. TAIR10
Match: AT3G13650.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 162.2 bits (409), Expect = 3.6e-40 Identity = 85/181 (46.96%), Postives = 111/181 (61.33%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. TAIR10
Match: AT1G65870.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 151.8 bits (382), Expect = 4.9e-37 Identity = 85/188 (45.21%), Postives = 118/188 (62.77%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. Swiss-Prot
Match: sp|Q9C891|DIR20_ARATH (Dirigent protein 20 OS=Arabidopsis thaliana OX=3702 GN=DIR20 PE=2 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 3.7e-42 Identity = 86/172 (50.00%), Postives = 117/172 (68.02%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. Swiss-Prot
Match: sp|Q9C523|DIR19_ARATH (Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 6.3e-42 Identity = 90/180 (50.00%), Postives = 121/180 (67.22%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. Swiss-Prot
Match: sp|Q9FI66|DIR3_ARATH (Dirigent protein 3 OS=Arabidopsis thaliana OX=3702 GN=DIR3 PE=3 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 5.0e-39 Identity = 87/187 (46.52%), Postives = 118/187 (63.10%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. Swiss-Prot
Match: sp|Q9LID5|DIR7_ARATH (Dirigent protein 7 OS=Arabidopsis thaliana OX=3702 GN=DIR7 PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 6.5e-39 Identity = 85/181 (46.96%), Postives = 111/181 (61.33%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. Swiss-Prot
Match: sp|Q9SS03|DIR21_ARATH (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 8.8e-36 Identity = 85/188 (45.21%), Postives = 118/188 (62.77%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. TrEMBL
Match: tr|A0A0A0LUT3|A0A0A0LUT3_CUCSA (Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_1G015830 PE=3 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 3.8e-100 Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. TrEMBL
Match: tr|A0A1S3BWU5|A0A1S3BWU5_CUCME (Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103494099 PE=3 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 6.4e-92 Identity = 171/185 (92.43%), Postives = 177/185 (95.68%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. TrEMBL
Match: tr|A0A0A0KX42|A0A0A0KX42_CUCSA (Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_4G280650 PE=3 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 2.5e-51 Identity = 105/175 (60.00%), Postives = 128/175 (73.14%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. TrEMBL
Match: tr|A0A1S3BM81|A0A1S3BM81_CUCME (Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103491572 PE=3 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.3e-49 Identity = 109/188 (57.98%), Postives = 135/188 (71.81%), Query Frame = 0
BLAST of CsaV3_1G003540 vs. TrEMBL
Match: tr|A0A072USJ4|A0A072USJ4_MEDTR (Dirigent protein OS=Medicago truncatula OX=3880 GN=25491434 PE=3 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 4.4e-48 Identity = 102/178 (57.30%), Postives = 124/178 (69.66%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |