CsaV3_1G003470 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G003470
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionF-box protein At3g07870-like
Locationchr1 : 2167317 .. 2168522 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAAAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTTATCTCCGATTTACCTATTTGTAGGTTAGTATGTAAAACTTGGAATCATACAGTTTTGGATTATGCTTCTGCTCCTCAATTTCAATGTCTTACTGGTGCTTTGCTTATCTGCACACATGATGAAGCTATTAGCATCGTCGATGACAGTTTTAAACTTAAATGCAATGCCAAAATGCAATGCATGAATTTTGATTCCAGAAAGCATTTGCATGCAAATTTGGATTTGGAATTGGAATTGATGAAATCTCCATCGTTATTGTTTGATGGCAATCGGAGTATCCATATAATAAATCAATGCAATGGGTTGTTGTACATTATCACCGTTGATTATGAGTGTCATGGCATGATTAATCATGAAATATTTAACCCTATGACTAATGAGTTCCTTCAAGTTCCCTGGACCGATGAATATAGATATGATGCGATTGGATTTGGTTGTAGCACTTCTACAAAACAATACAAATTGTTTAGAGTTAGAACCACTTTGCCTAATGAAGCATTTAGGAAAAGAATGGAAATTGATGTTTTGAGGTTTGGCAACGACAACAAATGGAGATCCCTACCTTTCTTTCAGCCTTCATCATCTCACAAATTTGTTTGCAGTGCGTATTTGAATGGAGTCATCTATTGGTTGGGAAAACTAAAACGTGATAGAAACAAGGTTGTCATATATGCTCTTGATGTTGAAACGGAAAAATTTGAATCGAGTACTATTTTGGAAGTTGGCCGGATTAACCAAGAGATCTTGAACATTTATAATTTTAATAAGACCATTTATGCAACCTTCATAACTTTGGTCGATGCAACTTATAAGTACCCGATTCAAATTTGGAAGATGCAAGGAAAAAATTCATGGAGTATTCAAGAAGTACTTAATAATGACACACCAAATGATCATTCCAGAGACCTTGCAATCATCAAAGAAGCCTTTGAAGATAGAGAGCACATGGTCAATTTTCGAATTTTTTGCTTCTCTAATTCTATCTTTGGGAGGATGAGGAAGAAAATCGTATCATGGTATCAAGAGGAAAGAAGTATTTGGAAAATAGAATCCTTGAATTTTGGTTCTCTATCAAACATTTTGGCAGGAGATAGTCAAGATTGA

mRNA sequence

ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAAAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTTATCTCCGATTTACCTATTTGTAGGTTAGTATGTAAAACTTGGAATCATACAGTTTTGGATTATGCTTCTGCTCCTCAATTTCAATGTCTTACTGGTGCTTTGCTTATCTGCACACATGATGAAGCTATTAGCATCGTCGATGACAGTTTTAAACTTAAATGCAATGCCAAAATGCAATGCATGAATTTTGATTCCAGAAAGCATTTGCATGCAAATTTGGATTTGGAATTGGAATTGATGAAATCTCCATCGTTATTGTTTGATGGCAATCGGAGTATCCATATAATAAATCAATGCAATGGGTTGTTGTACATTATCACCGTTGATTATGAGTGTCATGGCATGATTAATCATGAAATATTTAACCCTATGACTAATGAGTTCCTTCAAGTTCCCTGGACCGATGAATATAGATATGATGCGATTGGATTTGGTTGTAGCACTTCTACAAAACAATACAAATTGTTTAGAGTTAGAACCACTTTGCCTAATGAAGCATTTAGGAAAAGAATGGAAATTGATGTTTTGAGGTTTGGCAACGACAACAAATGGAGATCCCTACCTTTCTTTCAGCCTTCATCATCTCACAAATTTGTTTGCAGTGCGTATTTGAATGGAGTCATCTATTGGTTGGGAAAACTAAAACGTGATAGAAACAAGGTTGTCATATATGCTCTTGATGTTGAAACGGAAAAATTTGAATCGAGTACTATTTTGGAAGTTGGCCGGATTAACCAAGAGATCTTGAACATTTATAATTTTAATAAGACCATTTATGCAACCTTCATAACTTTGGTCGATGCAACTTATAAGTACCCGATTCAAATTTGGAAGATGCAAGGAAAAAATTCATGGAGTATTCAAGAAGTACTTAATAATGACACACCAAATGATCATTCCAGAGACCTTGCAATCATCAAAGAAGCCTTTGAAGATAGAGAGCACATGGTCAATTTTCGAATTTTTTGCTTCTCTAATTCTATCTTTGGGAGGATGAGGAAGAAAATCGTATCATGGTATCAAGAGGAAAGAAGTATTTGGAAAATAGAATCCTTGAATTTTGGTTCTCTATCAAACATTTTGGCAGGAGATAGTCAAGATTGA

Coding sequence (CDS)

ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAAAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTTATCTCCGATTTACCTATTTGTAGGTTAGTATGTAAAACTTGGAATCATACAGTTTTGGATTATGCTTCTGCTCCTCAATTTCAATGTCTTACTGGTGCTTTGCTTATCTGCACACATGATGAAGCTATTAGCATCGTCGATGACAGTTTTAAACTTAAATGCAATGCCAAAATGCAATGCATGAATTTTGATTCCAGAAAGCATTTGCATGCAAATTTGGATTTGGAATTGGAATTGATGAAATCTCCATCGTTATTGTTTGATGGCAATCGGAGTATCCATATAATAAATCAATGCAATGGGTTGTTGTACATTATCACCGTTGATTATGAGTGTCATGGCATGATTAATCATGAAATATTTAACCCTATGACTAATGAGTTCCTTCAAGTTCCCTGGACCGATGAATATAGATATGATGCGATTGGATTTGGTTGTAGCACTTCTACAAAACAATACAAATTGTTTAGAGTTAGAACCACTTTGCCTAATGAAGCATTTAGGAAAAGAATGGAAATTGATGTTTTGAGGTTTGGCAACGACAACAAATGGAGATCCCTACCTTTCTTTCAGCCTTCATCATCTCACAAATTTGTTTGCAGTGCGTATTTGAATGGAGTCATCTATTGGTTGGGAAAACTAAAACGTGATAGAAACAAGGTTGTCATATATGCTCTTGATGTTGAAACGGAAAAATTTGAATCGAGTACTATTTTGGAAGTTGGCCGGATTAACCAAGAGATCTTGAACATTTATAATTTTAATAAGACCATTTATGCAACCTTCATAACTTTGGTCGATGCAACTTATAAGTACCCGATTCAAATTTGGAAGATGCAAGGAAAAAATTCATGGAGTATTCAAGAAGTACTTAATAATGACACACCAAATGATCATTCCAGAGACCTTGCAATCATCAAAGAAGCCTTTGAAGATAGAGAGCACATGGTCAATTTTCGAATTTTTTGCTTCTCTAATTCTATCTTTGGGAGGATGAGGAAGAAAATCGTATCATGGTATCAAGAGGAAAGAAGTATTTGGAAAATAGAATCCTTGAATTTTGGTTCTCTATCAAACATTTTGGCAGGAGATAGTCAAGATTGA

Protein sequence

MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLLFDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGCSTSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNGVIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLVDATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSNSIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD
BLAST of CsaV3_1G003470 vs. NCBI nr
Match: KGN63785.1 (hypothetical protein Csa_1G015770 [Cucumis sativus])

HSP 1 Score: 833.9 bits (2153), Expect = 2.2e-238
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0

Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60

Query: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120
           FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL
Sbjct: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120

Query: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180
           FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC
Sbjct: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180

Query: 181 STSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNG 240
           STSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNG
Sbjct: 181 STSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNG 240

Query: 241 VIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLV 300
           VIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLV
Sbjct: 241 VIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLV 300

Query: 301 DATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSN 360
           DATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSN
Sbjct: 301 DATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSN 360

Query: 361 SIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD 402
           SIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD
Sbjct: 361 SIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD 401

BLAST of CsaV3_1G003470 vs. NCBI nr
Match: XP_004138336.1 (PREDICTED: uncharacterized protein LOC101222225 [Cucumis sativus] >KGN63784.1 hypothetical protein Csa_1G015760 [Cucumis sativus])

HSP 1 Score: 594.3 bits (1531), Expect = 3.0e-166
Identity = 301/407 (73.96%), Postives = 336/407 (82.56%), Query Frame = 0

Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVIS+LPICRLVC+TWNH VLDYASA Q
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60

Query: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120
           FQCLT ALLICT+DEAIS +DDS K+ CNA MQCM+FDSRKHLHAN DL+ ELMKSPSLL
Sbjct: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120

Query: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180
           FDGN SIHII+QCNGLLY+IT +YE HG+ NH IFNPMTNEF+Q+PW DEY YD IGFGC
Sbjct: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180

Query: 181 STSTKQYKLFRVRTTLPNEA-FRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLN 240
             STKQYKLFRVRTT P     RK ME+DVLRFGNDNKWR LPF  PS SH FVCSAYLN
Sbjct: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFL-PSPSHVFVCSAYLN 240

Query: 241 GVIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITL 300
           GVIYWLGK++   N+VVI+A DVETEKFESSTIL+VG ++QE LN+Y F +TIYATFI  
Sbjct: 241 GVIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFI-- 300

Query: 301 VDATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREH---MVNFRIF 360
            + TY   IQ+WKMQ K SW  + ++ +D PN H RDL II EA EDRE    MVNFR F
Sbjct: 301 -EMTYD-SIQVWKMQEKGSWIPEVLVMDDIPN-HWRDLTII-EALEDRETILCMVNFRFF 360

Query: 361 CFSNSIFGRMRKKIVSWYQEE---RSIWKIESLNFGSLSNILAGDSQ 401
           CF NSIFGR RKK++  Y+E+   RSIWKIESLNFGSLSNIL+G+ Q
Sbjct: 361 CFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 400

BLAST of CsaV3_1G003470 vs. NCBI nr
Match: KGN63745.1 (hypothetical protein Csa_1G014420 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 1.8e-62
Identity = 180/432 (41.67%), Postives = 245/432 (56.71%), Query Frame = 0

Query: 3   KMEKMICESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQF 62
           +ME M    ++M +DWG+ LP  I  TIFSKLVIS+LP CR VCKTWNH VL YAS+ Q 
Sbjct: 23  QMENMEMGERRMSIDWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQL 82

Query: 63  QCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLH-ANLDLELELMKSPSLL 122
           Q LT A L+ T D  +     +++L CN KM C+N D+R+  +  + DLE E +KS SL 
Sbjct: 83  QFLTNAFLLSTSDRML-----NYEL-CNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQ 142

Query: 123 FDGNRSIHII--NQCNGLLYIITV-DYE-CHGMINHEIFNPMTNEFLQV----PWTDEYR 182
           F G+ +  I+  + CNGL++I    DY  C G     IFNPMTNEF QV     + D Y 
Sbjct: 143 FYGDWTFMILLAHPCNGLMFISKCSDYTWCQG-----IFNPMTNEFFQVSEQDTFDDFYH 202

Query: 183 YDAIGFGCSTSTKQYKLFRVRTTLP-NEAFR---------KRMEIDVLRFGND------- 242
           Y   GFG S  +KQYKLFRV   +P +E FR             ++VL FG         
Sbjct: 203 Y---GFGLSAISKQYKLFRVSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPI 262

Query: 243 -NKWRSLPFFQPSSSHKFVCSAYLNGVIYWLGKL--KRDRNKVVIYALDVETEKFESSTI 302
            N+WR L     + S   +   YLNG+IYWLGK   K+++ + VIYALDVETE+ E S I
Sbjct: 263 HNQWRHL----HNLSCDLIHGVYLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVI 322

Query: 303 LEVGRINQEILNIYNFNKTIYATFITLVDATYKYPIQIWKMQGKNSWSIQEVLNNDTPND 362
           L+V   + +   ++ FN TIYA F    +   +  IQ+W MQ K SW  Q V+      D
Sbjct: 323 LQVQASDGK---MHPFNGTIYALFYINWEKDSR-TIQVWSMQEKCSWIRQFVI-----RD 382

Query: 363 HSRDLAIIK--EAFEDRE--HMVNFRIFCFSNSIFGRMRKKIVSWYQEE-RSIWKIESLN 400
            S++   ++  + FED E   +++   FCF + +    +K+I+S  Q++ R + +IE LN
Sbjct: 383 ISKEWGCLELIKIFEDGEILFLIDSDFFCFYHPL--TEKKRIISKNQKKNRFVCQIECLN 425

BLAST of CsaV3_1G003470 vs. NCBI nr
Match: KGN65172.1 (hypothetical protein Csa_1G257290 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 2.4e-59
Identity = 190/436 (43.58%), Postives = 240/436 (55.05%), Query Frame = 0

Query: 1   MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDY 60
           ME ME+ I       ++M ++ G+ LP  I  TIFSKLVISDLP CRLV  TWN  VLDY
Sbjct: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60

Query: 61  ASAPQFQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLH-ANLDLELELM 120
           AS+ Q Q L  A L+ T D  +     ++KL CN KM C+N D+R+  +  + DLE E +
Sbjct: 61  ASSTQLQFLKNAFLLSTSDRGL-----NYKL-CNPKMHCINLDTRQLSNDFDFDLESEFI 120

Query: 121 KSPSLLFDGNRSIHII--NQCNGLLYIITV-DYE-CHGMINHEIFNPMTNEFLQV----P 180
           KS SL FDG+ +  II    CNGL+ I    DY  C G     IFNPMTNEFLQV     
Sbjct: 121 KSASLQFDGDWTYTIIMAGSCNGLMLISKCSDYTWCQG-----IFNPMTNEFLQVSEHGT 180

Query: 181 WTDEYRYDAIGFGCSTSTKQYKLFRV-----RTTLPNEAFRKRMEIDVLRFGND------ 240
           + D Y Y   GFG S  TKQYKLFRV     R    +        ++VL FG        
Sbjct: 181 FDDFYLY---GFGFSPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSI 240

Query: 241 ---NKWR---SLPFFQPSSSHKFVCSAYLNGVIYWLGKLK-RDR-NKVVIYALDVETEKF 300
              N+WR   +LPF             YLNG+IYWL K K +D+  K VIYALDVETE  
Sbjct: 241 PIHNQWRRLHTLPF------EIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHI 300

Query: 301 ESSTILEVGRINQEILNIYNFNKTIYATFITLVDATYKYPIQIWKMQGKNSWSIQEVLNN 360
           E + +L+V   +     I+ FN TIYATF    +   +  IQ+W+MQ K+SW  + V+  
Sbjct: 301 EMTVVLQVP--SNGYGKIHQFNGTIYATFHINWEKDSR-TIQVWRMQEKDSWVRKFVI-- 360

Query: 361 DTPNDHSRD---LAIIKEAFEDRE--HMVNFRIFCFSNSIFGRMRKKIVSWYQ-EERSIW 398
               D SR+   L +IK  FED E   M+N   FCF N      +K+I+S  Q ++R I 
Sbjct: 361 ---CDISREWIHLQLIK-MFEDEEILFMINMDFFCFYNP--SSKKKRIISKNQKKKRYIC 405

BLAST of CsaV3_1G003470 vs. NCBI nr
Match: KGN63746.1 (hypothetical protein Csa_1G014430 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 3.8e-52
Identity = 171/427 (40.05%), Postives = 237/427 (55.50%), Query Frame = 0

Query: 3   KMEKMICESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQF 62
           +ME M    ++M +DWG+ LP  I   IFSKLVIS+LP CR VCKTWNH VL YAS+ Q 
Sbjct: 23  QMENMEMGERRMSIDWGKGLPPLIAKIIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQL 82

Query: 63  QCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLLF 122
           Q LT A L+ T D+ +     +++L CN KM  +N D+ +    ++DLE+E +KS S  F
Sbjct: 83  QFLTNAFLLSTSDQML-----NYEL-CNPKMHSINLDNTQ-CSDDVDLEMEFIKSGSFQF 142

Query: 123 DGNRSIHII--NQCNGLLYIITV-DYE-CHGMINHEIFNPMTNEFLQV----PWTDEYRY 182
            G+ +  I+  + CNGL++I    DY  C G     IFNPMTNEF QV     + D Y Y
Sbjct: 143 YGDWTFMILMAHPCNGLVFISKCSDYTWCQG-----IFNPMTNEFFQVSEQDTFDDFYNY 202

Query: 183 DAIGFGCSTSTKQYKLFRVRTTLP-NEAFR---------KRMEIDVLRFGND-------- 242
              GFG S  TKQYKLFR    +P ++ FR             ++VL FG          
Sbjct: 203 ---GFGLSPVTKQYKLFRTSKAIPYSKRFRLVSTCSTDDTHYMMEVLTFGRSGTNHIPIH 262

Query: 243 NKWRSLPFFQPSSSHKFVC---SAYLNGVIY-WLGKLKRDRNKVVIYALDVETEKFESST 302
           N+WR L     + S+  V      YLNG+I+ W  K  + + K  IYALD ETE+ E S 
Sbjct: 263 NQWRHL----HNLSYDIVVGDGGVYLNGIIFGWEKKNVKRKRKYDIYALDDETEQIEMSV 322

Query: 303 ILEVGRINQEILNIYNFNKTIYATFITLVDATYKYPIQIWKMQGKNSWSIQEVLNNDTPN 362
           IL+V   + +   ++ FN TIYATF T  +      +Q+W MQ K+SW I++ + +D   
Sbjct: 323 ILQVHARDGK---MHLFNGTIYATFYTNWEKD-DLTVQVWSMQEKHSW-IRKFVISDISK 382

Query: 363 DHSRDLAIIKEAFEDREHMVNFRIFCFSNSIFGRMRKKIVSWYQEERS-IWKIESLNFGS 398
             S  L +IK  F+D + + +F  F F N +    +K I+S  Q+++S + +IE LNFGS
Sbjct: 383 QWS-CLELIK-MFKDGD-ISDF--FYFYNPL--TKKKSIISKDQKKKSCVCQIECLNFGS 418

BLAST of CsaV3_1G003470 vs. TrEMBL
Match: tr|A0A0A0LPH0|A0A0A0LPH0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015770 PE=4 SV=1)

HSP 1 Score: 833.9 bits (2153), Expect = 1.5e-238
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0

Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60

Query: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120
           FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL
Sbjct: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120

Query: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180
           FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC
Sbjct: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180

Query: 181 STSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNG 240
           STSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNG
Sbjct: 181 STSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNG 240

Query: 241 VIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLV 300
           VIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLV
Sbjct: 241 VIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLV 300

Query: 301 DATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSN 360
           DATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSN
Sbjct: 301 DATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSN 360

Query: 361 SIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD 402
           SIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD
Sbjct: 361 SIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD 401

BLAST of CsaV3_1G003470 vs. TrEMBL
Match: tr|A0A0A0LRY6|A0A0A0LRY6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015760 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 2.0e-166
Identity = 301/407 (73.96%), Postives = 336/407 (82.56%), Query Frame = 0

Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVIS+LPICRLVC+TWNH VLDYASA Q
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60

Query: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120
           FQCLT ALLICT+DEAIS +DDS K+ CNA MQCM+FDSRKHLHAN DL+ ELMKSPSLL
Sbjct: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120

Query: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180
           FDGN SIHII+QCNGLLY+IT +YE HG+ NH IFNPMTNEF+Q+PW DEY YD IGFGC
Sbjct: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180

Query: 181 STSTKQYKLFRVRTTLPNEA-FRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLN 240
             STKQYKLFRVRTT P     RK ME+DVLRFGNDNKWR LPF  PS SH FVCSAYLN
Sbjct: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFL-PSPSHVFVCSAYLN 240

Query: 241 GVIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITL 300
           GVIYWLGK++   N+VVI+A DVETEKFESSTIL+VG ++QE LN+Y F +TIYATFI  
Sbjct: 241 GVIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFI-- 300

Query: 301 VDATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREH---MVNFRIF 360
            + TY   IQ+WKMQ K SW  + ++ +D PN H RDL II EA EDRE    MVNFR F
Sbjct: 301 -EMTYD-SIQVWKMQEKGSWIPEVLVMDDIPN-HWRDLTII-EALEDRETILCMVNFRFF 360

Query: 361 CFSNSIFGRMRKKIVSWYQEE---RSIWKIESLNFGSLSNILAGDSQ 401
           CF NSIFGR RKK++  Y+E+   RSIWKIESLNFGSLSNIL+G+ Q
Sbjct: 361 CFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 400

BLAST of CsaV3_1G003470 vs. TrEMBL
Match: tr|A0A0A0LPC6|A0A0A0LPC6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014420 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.2e-62
Identity = 180/432 (41.67%), Postives = 245/432 (56.71%), Query Frame = 0

Query: 3   KMEKMICESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQF 62
           +ME M    ++M +DWG+ LP  I  TIFSKLVIS+LP CR VCKTWNH VL YAS+ Q 
Sbjct: 23  QMENMEMGERRMSIDWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQL 82

Query: 63  QCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLH-ANLDLELELMKSPSLL 122
           Q LT A L+ T D  +     +++L CN KM C+N D+R+  +  + DLE E +KS SL 
Sbjct: 83  QFLTNAFLLSTSDRML-----NYEL-CNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQ 142

Query: 123 FDGNRSIHII--NQCNGLLYIITV-DYE-CHGMINHEIFNPMTNEFLQV----PWTDEYR 182
           F G+ +  I+  + CNGL++I    DY  C G     IFNPMTNEF QV     + D Y 
Sbjct: 143 FYGDWTFMILLAHPCNGLMFISKCSDYTWCQG-----IFNPMTNEFFQVSEQDTFDDFYH 202

Query: 183 YDAIGFGCSTSTKQYKLFRVRTTLP-NEAFR---------KRMEIDVLRFGND------- 242
           Y   GFG S  +KQYKLFRV   +P +E FR             ++VL FG         
Sbjct: 203 Y---GFGLSAISKQYKLFRVSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPI 262

Query: 243 -NKWRSLPFFQPSSSHKFVCSAYLNGVIYWLGKL--KRDRNKVVIYALDVETEKFESSTI 302
            N+WR L     + S   +   YLNG+IYWLGK   K+++ + VIYALDVETE+ E S I
Sbjct: 263 HNQWRHL----HNLSCDLIHGVYLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVI 322

Query: 303 LEVGRINQEILNIYNFNKTIYATFITLVDATYKYPIQIWKMQGKNSWSIQEVLNNDTPND 362
           L+V   + +   ++ FN TIYA F    +   +  IQ+W MQ K SW  Q V+      D
Sbjct: 323 LQVQASDGK---MHPFNGTIYALFYINWEKDSR-TIQVWSMQEKCSWIRQFVI-----RD 382

Query: 363 HSRDLAIIK--EAFEDRE--HMVNFRIFCFSNSIFGRMRKKIVSWYQEE-RSIWKIESLN 400
            S++   ++  + FED E   +++   FCF + +    +K+I+S  Q++ R + +IE LN
Sbjct: 383 ISKEWGCLELIKIFEDGEILFLIDSDFFCFYHPL--TEKKRIISKNQKKNRFVCQIECLN 425

BLAST of CsaV3_1G003470 vs. TrEMBL
Match: tr|A0A0A0LWG1|A0A0A0LWG1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.6e-59
Identity = 190/436 (43.58%), Postives = 240/436 (55.05%), Query Frame = 0

Query: 1   MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDY 60
           ME ME+ I       ++M ++ G+ LP  I  TIFSKLVISDLP CRLV  TWN  VLDY
Sbjct: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60

Query: 61  ASAPQFQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLH-ANLDLELELM 120
           AS+ Q Q L  A L+ T D  +     ++KL CN KM C+N D+R+  +  + DLE E +
Sbjct: 61  ASSTQLQFLKNAFLLSTSDRGL-----NYKL-CNPKMHCINLDTRQLSNDFDFDLESEFI 120

Query: 121 KSPSLLFDGNRSIHII--NQCNGLLYIITV-DYE-CHGMINHEIFNPMTNEFLQV----P 180
           KS SL FDG+ +  II    CNGL+ I    DY  C G     IFNPMTNEFLQV     
Sbjct: 121 KSASLQFDGDWTYTIIMAGSCNGLMLISKCSDYTWCQG-----IFNPMTNEFLQVSEHGT 180

Query: 181 WTDEYRYDAIGFGCSTSTKQYKLFRV-----RTTLPNEAFRKRMEIDVLRFGND------ 240
           + D Y Y   GFG S  TKQYKLFRV     R    +        ++VL FG        
Sbjct: 181 FDDFYLY---GFGFSPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSI 240

Query: 241 ---NKWR---SLPFFQPSSSHKFVCSAYLNGVIYWLGKLK-RDR-NKVVIYALDVETEKF 300
              N+WR   +LPF             YLNG+IYWL K K +D+  K VIYALDVETE  
Sbjct: 241 PIHNQWRRLHTLPF------EIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHI 300

Query: 301 ESSTILEVGRINQEILNIYNFNKTIYATFITLVDATYKYPIQIWKMQGKNSWSIQEVLNN 360
           E + +L+V   +     I+ FN TIYATF    +   +  IQ+W+MQ K+SW  + V+  
Sbjct: 301 EMTVVLQVP--SNGYGKIHQFNGTIYATFHINWEKDSR-TIQVWRMQEKDSWVRKFVI-- 360

Query: 361 DTPNDHSRD---LAIIKEAFEDRE--HMVNFRIFCFSNSIFGRMRKKIVSWYQ-EERSIW 398
               D SR+   L +IK  FED E   M+N   FCF N      +K+I+S  Q ++R I 
Sbjct: 361 ---CDISREWIHLQLIK-MFEDEEILFMINMDFFCFYNP--SSKKKRIISKNQKKKRYIC 405

BLAST of CsaV3_1G003470 vs. TrEMBL
Match: tr|A0A0A0LUP7|A0A0A0LUP7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014430 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.5e-52
Identity = 171/427 (40.05%), Postives = 237/427 (55.50%), Query Frame = 0

Query: 3   KMEKMICESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQF 62
           +ME M    ++M +DWG+ LP  I   IFSKLVIS+LP CR VCKTWNH VL YAS+ Q 
Sbjct: 23  QMENMEMGERRMSIDWGKGLPPLIAKIIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQL 82

Query: 63  QCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLLF 122
           Q LT A L+ T D+ +     +++L CN KM  +N D+ +    ++DLE+E +KS S  F
Sbjct: 83  QFLTNAFLLSTSDQML-----NYEL-CNPKMHSINLDNTQ-CSDDVDLEMEFIKSGSFQF 142

Query: 123 DGNRSIHII--NQCNGLLYIITV-DYE-CHGMINHEIFNPMTNEFLQV----PWTDEYRY 182
            G+ +  I+  + CNGL++I    DY  C G     IFNPMTNEF QV     + D Y Y
Sbjct: 143 YGDWTFMILMAHPCNGLVFISKCSDYTWCQG-----IFNPMTNEFFQVSEQDTFDDFYNY 202

Query: 183 DAIGFGCSTSTKQYKLFRVRTTLP-NEAFR---------KRMEIDVLRFGND-------- 242
              GFG S  TKQYKLFR    +P ++ FR             ++VL FG          
Sbjct: 203 ---GFGLSPVTKQYKLFRTSKAIPYSKRFRLVSTCSTDDTHYMMEVLTFGRSGTNHIPIH 262

Query: 243 NKWRSLPFFQPSSSHKFVC---SAYLNGVIY-WLGKLKRDRNKVVIYALDVETEKFESST 302
           N+WR L     + S+  V      YLNG+I+ W  K  + + K  IYALD ETE+ E S 
Sbjct: 263 NQWRHL----HNLSYDIVVGDGGVYLNGIIFGWEKKNVKRKRKYDIYALDDETEQIEMSV 322

Query: 303 ILEVGRINQEILNIYNFNKTIYATFITLVDATYKYPIQIWKMQGKNSWSIQEVLNNDTPN 362
           IL+V   + +   ++ FN TIYATF T  +      +Q+W MQ K+SW I++ + +D   
Sbjct: 323 ILQVHARDGK---MHLFNGTIYATFYTNWEKD-DLTVQVWSMQEKHSW-IRKFVISDISK 382

Query: 363 DHSRDLAIIKEAFEDREHMVNFRIFCFSNSIFGRMRKKIVSWYQEERS-IWKIESLNFGS 398
             S  L +IK  F+D + + +F  F F N +    +K I+S  Q+++S + +IE LNFGS
Sbjct: 383 QWS-CLELIK-MFKDGD-ISDF--FYFYNPL--TKKKSIISKDQKKKSCVCQIECLNFGS 418

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN63785.12.2e-238100.00hypothetical protein Csa_1G015770 [Cucumis sativus][more]
XP_004138336.13.0e-16673.96PREDICTED: uncharacterized protein LOC101222225 [Cucumis sativus] >KGN63784.1 hy... [more]
KGN63745.11.8e-6241.67hypothetical protein Csa_1G014420 [Cucumis sativus][more]
KGN65172.12.4e-5943.58hypothetical protein Csa_1G257290 [Cucumis sativus][more]
KGN63746.13.8e-5240.05hypothetical protein Csa_1G014430 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LPH0|A0A0A0LPH0_CUCSA1.5e-238100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015770 PE=4 SV=1[more]
tr|A0A0A0LRY6|A0A0A0LRY6_CUCSA2.0e-16673.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015760 PE=4 SV=1[more]
tr|A0A0A0LPC6|A0A0A0LPC6_CUCSA1.2e-6241.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014420 PE=4 SV=1[more]
tr|A0A0A0LWG1|A0A0A0LWG1_CUCSA1.6e-5943.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 SV=1[more]
tr|A0A0A0LUP7|A0A0A0LUP7_CUCSA2.5e-5240.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014430 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR013187F-box-assoc_dom_typ3
IPR017451F-box-assoc_interact_dom
IPR001810F-box_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G003470.1CsaV3_1G003470.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 17..56
e-value: 2.3E-6
score: 29.4
NoneNo IPR availablePANTHERPTHR31790FAMILY NOT NAMEDcoord: 11..339
NoneNo IPR availablePANTHERPTHR31790:SF18SUBFAMILY NOT NAMEDcoord: 11..339
IPR001810F-box domainPFAMPF00646F-boxcoord: 16..52
e-value: 2.6E-6
score: 27.1
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 131..327
e-value: 8.3E-20
score: 69.1
IPR013187F-box associated domain, type 3PFAMPF08268FBA_3coord: 237..350
e-value: 2.0E-6
score: 27.6
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 18..54

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G003470Silver-seed gourdcarcucB0419
CsaV3_1G003470Silver-seed gourdcarcucB0494
CsaV3_1G003470Silver-seed gourdcarcucB0549
CsaV3_1G003470Silver-seed gourdcarcucB0629
CsaV3_1G003470Cucumber (Gy14) v2cgybcucB002
CsaV3_1G003470Cucumber (Gy14) v2cgybcucB003
CsaV3_1G003470Cucumber (Gy14) v1cgycucB314
CsaV3_1G003470Cucumber (Gy14) v1cgycucB436
CsaV3_1G003470Cucurbita maxima (Rimu)cmacucB0071
CsaV3_1G003470Cucurbita maxima (Rimu)cmacucB0101
CsaV3_1G003470Cucurbita maxima (Rimu)cmacucB0122
CsaV3_1G003470Cucurbita maxima (Rimu)cmacucB0252
CsaV3_1G003470Cucurbita maxima (Rimu)cmacucB0466
CsaV3_1G003470Cucurbita moschata (Rifu)cmocucB0057
CsaV3_1G003470Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G003470Cucurbita moschata (Rifu)cmocucB0108
CsaV3_1G003470Cucurbita moschata (Rifu)cmocucB0238
CsaV3_1G003470Cucurbita moschata (Rifu)cmocucB0463
CsaV3_1G003470Cucurbita pepo (Zucchini)cpecucB0033
CsaV3_1G003470Cucurbita pepo (Zucchini)cpecucB0431
CsaV3_1G003470Cucurbita pepo (Zucchini)cpecucB0474
CsaV3_1G003470Cucurbita pepo (Zucchini)cpecucB0627
CsaV3_1G003470Cucurbita pepo (Zucchini)cpecucB0803
CsaV3_1G003470Wild cucumber (PI 183967)cpicucB001
CsaV3_1G003470Wild cucumber (PI 183967)cpicucB002
CsaV3_1G003470Bottle gourd (USVL1VR-Ls)cuclsiB024
CsaV3_1G003470Bottle gourd (USVL1VR-Ls)cuclsiB082
CsaV3_1G003470Melon (DHL92) v3.5.1cucmeB006
CsaV3_1G003470Melon (DHL92) v3.5.1cucmeB026
CsaV3_1G003470Melon (DHL92) v3.5.1cucmeB055
CsaV3_1G003470Melon (DHL92) v3.6.1cucmedB024
CsaV3_1G003470Melon (DHL92) v3.6.1cucmedB051
CsaV3_1G003470Watermelon (Charleston Gray)cucwcgB064
CsaV3_1G003470Watermelon (Charleston Gray)cucwcgB089
CsaV3_1G003470Watermelon (97103) v1cucwmB071
CsaV3_1G003470Watermelon (97103) v1cucwmB106
CsaV3_1G003470Watermelon (97103) v2cucwmbB055
CsaV3_1G003470Watermelon (97103) v2cucwmbB077
CsaV3_1G003470Wax gourdcucwgoB120
CsaV3_1G003470Silver-seed gourdcarcucB0628
CsaV3_1G003470Cucumber (Chinese Long) v3cuccucB000