CsaV3_1G003370 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGTGATTGGAACGGATTGTTTTTTGTAATTTGTCGTAAATATTTTGAACAATTTCTTAAACGTTGTCATGGTTTGATCTATTAAGGGAAATGATTTTATTTAAAGAATTGTGGAACTTTGGAAGGTAGTGCATGGCAATGGTGGCAAATGGAAAATGGATGGAGGAAGAAGGAGAAGACTGAAGATTAATATATATTAAATTCAATTTCATGTCAAGCACGTTCAAAGCGGTGCCCAACCCAACGATTCAAGCAAGAACATCGCCTTTGATGAATTTGGACTGCCAGATGAACCAACCCATCATTTTTCAATTCAAAATTCCAATCATGGCGTATCTAGAATTTGATTTCATGCCTCTTACCACTTATGCTTATTATAAGTACCTGATTTTCTTTAAACCCATCACCGGAAAATGGCTAGGAAACACACCCGATTGCAGAGGGTGAGAATTTCTCAACCCTCTGGTTGTTTTCAGGTATGTTTCCGGCAAATTCGAACCAGACCCACCGTCGATTCGATTCAGAATTTTCAGAGGGAGGAACTTTTAGGGGATGGGTATTGCGCGGGAAGTGTGAAATCTGTGGATCAGATTGGTAATAGAATAATGGTTGTGGTTGATTCTAGTTTTGAGGGTAAAGGAGCTCTTGAATGGGCTTTGTCTCATGCTGTTCAGTCTCATGATTCTATTATTCTTCTTCACGTTTCTAAATCTTCAAAACAAGGTTAAGCTGGGTCTAATATGTGTTGATTAGCTTTTTTTTTTTTTTTTTTCCATGGGATTTCTGTTTTTCTGAAGATGTTGATGTTTTTCAGGCGTTGTGTTTGATGAAAAGCTTGACATGAAGGCTTATCAGCTTCTTCTGTCTTTGAAGAATATGTGTCAAATGAGAAGGCCAGGAGTAAGTTTCTGTGATGCCTTTCATTTCTCTTTTCCATGTGAGTCTAGAAGGGAAGATTGGTTGGTAGATAACAATGAATTAGTGTATGAATATGTTGTCATGTTTTCTATTTTTTTTCCACATGAATCTAGAGATGAAGAGAGAACTGATTGACAGGTTAACAGTAAACAATACATAATCATAATTTAGTGTAGGATTATGTTGCTAGGACAATAGGCTCTTGGTGTTTCTGTATTACTCCATGAAATAGTAAGATATTGTCCACTTTAACTTAATCCGTTAATTTTGCTTTTAAATTATGCACAAGAGGTGTATATGATTATATGGTTTCTATCATGTTGTGTTGTCAACTGTCTTTAATTTGTTCCTTCTATCTGTGATTAGGTGCTAGTTTGAATTTTTGGCTTAGATATCCGTTGAATGTGGATTCTAAGCAGAATGAGTTAACTGAAGAAACACAACACTCGATGTTACAAAAAAAATTAAGCGGAAGGAATTATTATTTAATTTCAGGTTCAAGTGGAGATGGAATTCCTACAGGGGAAGGAGATGGGTCGTGTGATCGTCGAAGAAGCCAAGAAACAGCGAGTGTCTCTGTTGGTTCTTGGGCAAAGGAAGCAATCTCCATTCCGGTCACTGATAAAGAAGTTCAGTACAAACAAGAGAAGGAATCATGGAGGGATTGTGGAGTACTGCATCCAAACATCTTCATGCCTAACCATTGCGGTGAGGAGGAAAAGCAAGAAAGTAGGAGGATATTTGATCACGACAAAAAGTCACAAGAATTTCTGGCTTTTGGCTTGAATCTGTATGTTATACTTTCTTCTTTCAGCTGCCATTGTTGTTTTTGTAGAGAAAAACAAGATGGAAATGGTGAGGCTTCTGATATTGTAAGTCTCATCTAGCCTCACTTTTTGCTTCTTTAATTGCAATGGAGTGGCTGTATTACTCAAAAGTAGAAAACCCAAGAACAAAAAAAAATTGATGTAGAAATTTGTAAATTGATCCTCTTTTTGTCACTGTTATTTGATCCAAACTAAAAGATTATCATAGATTTGGGAGGGAGCCTTTGTTGTCTCTGTCTTATACATGAGAGTATTAGAATTCAGTCTTATCGGT ATGGCTAGGAAACACACCCGATTGCAGAGGGTGAGAATTTCTCAACCCTCTGGTTGTTTTCAGGTATGTTTCCGGCAAATTCGAACCAGACCCACCGTCGATTCGATTCAGAATTTTCAGAGGGAGGAACTTTTAGGGGATGGGTATTGCGCGGGAAGTGTGAAATCTGTGGATCAGATTGGTAATAGAATAATGGTTGTGGTTGATTCTAGTTTTGAGGGTAAAGGAGCTCTTGAATGGGCTTTGTCTCATGCTGTTCAGTCTCATGATTCTATTATTCTTCTTCACGTTTCTAAATCTTCAAAACAAGGCGTTGTGTTTGATGAAAAGCTTGACATGAAGGCTTATCAGCTTCTTCTGTCTTTGAAGAATATGTGTCAAATGAGAAGGCCAGGAGTTCAAGTGGAGATGGAATTCCTACAGGGGAAGGAGATGGGTCGTGTGATCGTCGAAGAAGCCAAGAAACAGCGAGTGTCTCTGTTGGTTCTTGGGCAAAGGAAGCAATCTCCATTCCGGTCACTGATAAAGAAGTTCAGTACAAACAAGAGAAGGAATCATGGAGGGATTGTGGAGTACTGCATCCAAACATCTTCATGCCTAACCATTGCGGTGAGGAGGAAAAGCAAGAAAGTAGGAGGATATTTGATCACGACAAAAAGTCACAAGAATTTCTGGCTTTTGGCTTGA ATGGCTAGGAAACACACCCGATTGCAGAGGGTGAGAATTTCTCAACCCTCTGGTTGTTTTCAGGTATGTTTCCGGCAAATTCGAACCAGACCCACCGTCGATTCGATTCAGAATTTTCAGAGGGAGGAACTTTTAGGGGATGGGTATTGCGCGGGAAGTGTGAAATCTGTGGATCAGATTGGTAATAGAATAATGGTTGTGGTTGATTCTAGTTTTGAGGGTAAAGGAGCTCTTGAATGGGCTTTGTCTCATGCTGTTCAGTCTCATGATTCTATTATTCTTCTTCACGTTTCTAAATCTTCAAAACAAGGCGTTGTGTTTGATGAAAAGCTTGACATGAAGGCTTATCAGCTTCTTCTGTCTTTGAAGAATATGTGTCAAATGAGAAGGCCAGGAGTTCAAGTGGAGATGGAATTCCTACAGGGGAAGGAGATGGGTCGTGTGATCGTCGAAGAAGCCAAGAAACAGCGAGTGTCTCTGTTGGTTCTTGGGCAAAGGAAGCAATCTCCATTCCGGTCACTGATAAAGAAGTTCAGTACAAACAAGAGAAGGAATCATGGAGGGATTGTGGAGTACTGCATCCAAACATCTTCATGCCTAACCATTGCGGTGAGGAGGAAAAGCAAGAAAGTAGGAGGATATTTGATCACGACAAAAAGTCACAAGAATTTCTGGCTTTTGGCTTGA MARKHTRLQRVRISQPSGCFQVCFRQIRTRPTVDSIQNFQREELLGDGYCAGSVKSVDQIGNRIMVVVDSSFEGKGALEWALSHAVQSHDSIILLHVSKSSKQGVVFDEKLDMKAYQLLLSLKNMCQMRRPGVQVEMEFLQGKEMGRVIVEEAKKQRVSLLVLGQRKQSPFRSLIKKFSTNKRRNHGGIVEYCIQTSSCLTIAVRRKSKKVGGYLITTKSHKNFWLLA
BLAST of CsaV3_1G003370 vs. NCBI nr
Match: XP_004138331.1 (PREDICTED: uncharacterized protein LOC101221050 [Cucumis sativus]) HSP 1 Score: 452.6 bits (1163), Expect = 8.0e-124 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. NCBI nr
Match: XP_008453308.1 (PREDICTED: uncharacterized protein LOC103494065 [Cucumis melo]) HSP 1 Score: 443.7 bits (1140), Expect = 3.7e-121 Identity = 224/228 (98.25%), Postives = 225/228 (98.68%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. NCBI nr
Match: XP_023531669.1 (uncharacterized protein LOC111793841 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 383.3 bits (983), Expect = 5.9e-103 Identity = 193/231 (83.55%), Postives = 209/231 (90.48%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. NCBI nr
Match: XP_022966082.1 (uncharacterized protein LOC111465801 [Cucurbita maxima]) HSP 1 Score: 382.9 bits (982), Expect = 7.8e-103 Identity = 194/231 (83.98%), Postives = 209/231 (90.48%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. NCBI nr
Match: XP_022933390.1 (uncharacterized protein LOC111440820 [Cucurbita moschata]) HSP 1 Score: 382.1 bits (980), Expect = 1.3e-102 Identity = 192/231 (83.12%), Postives = 209/231 (90.48%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TAIR10
Match: AT3G03290.1 (Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 182.2 bits (461), Expect = 3.6e-46 Identity = 89/174 (51.15%), Postives = 126/174 (72.41%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TAIR10
Match: AT5G17390.1 (Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 166.4 bits (420), Expect = 2.1e-41 Identity = 77/162 (47.53%), Postives = 121/162 (74.69%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TAIR10
Match: AT2G03720.1 (Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 147.9 bits (372), Expect = 7.6e-36 Identity = 83/168 (49.40%), Postives = 117/168 (69.64%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TAIR10
Match: AT1G69080.1 (Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 146.7 bits (369), Expect = 1.7e-35 Identity = 85/186 (45.70%), Postives = 119/186 (63.98%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TAIR10
Match: AT1G44760.1 (Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 108.6 bits (270), Expect = 5.1e-24 Identity = 67/166 (40.36%), Postives = 91/166 (54.82%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TrEMBL
Match: tr|A0A1S3BVX2|A0A1S3BVX2_CUCME (uncharacterized protein LOC103494065 OS=Cucumis melo OX=3656 GN=LOC103494065 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 2.5e-121 Identity = 224/228 (98.25%), Postives = 225/228 (98.68%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TrEMBL
Match: tr|A0A0A0LPN5|A0A0A0LPN5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015670 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 2.4e-68 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TrEMBL
Match: tr|A0A2C9VR23|A0A2C9VR23_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G081700 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 3.6e-56 Identity = 130/230 (56.52%), Postives = 164/230 (71.30%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TrEMBL
Match: tr|A0A067KGJ0|A0A067KGJ0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11756 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 4.7e-56 Identity = 125/229 (54.59%), Postives = 162/229 (70.74%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TrEMBL
Match: tr|B9RLK3|B9RLK3_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1468070 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 5.2e-55 Identity = 117/221 (52.94%), Postives = 158/221 (71.49%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |