CsaV3_1G003340 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G003340
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Dirigent protein
Location	chr1 : 2077360 .. 2077911 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTTTCCAGCAAGATTTTGGTGATTTCTATGGCGATTCTCGTAGCTGTTTGTTCAACTGAAGCGTTAGACCCTAATGTGACCCGGATTCAGTTCTACATGCATGATATCGTGAGTGGTCCGAACCCCACCGCGATTCAAGTCGCCGGCCGGCAGACGAACTATGCTGGTACGGATCCAATCGCCGCCATGTTTGGGTCTGTTTTCATGATGGATAACCCACTCACGGTGACGCCGGAGTTGAACTCGACGTTGATAGGTCGTGCTCAGGGGATTTATGCAATGTCGGCGCAGCAGAATGAGTTCAGCCTTTTGATGACGCTTACCTTCGGGATGACCGGCGGACAGTACAACGGTAGCTCGTTCAGCGTCGTTGGGCGGAATCCCATCATGAACGAAGTCCGGGAGATGCCGGTCGTCGGAGGGACGGGGATTTTCCGGCTGGTTCGTGGGTATTGCTTAGCTAGGACATTCTCTTTCAGGAATATGGATGCTGTGATTGGCTACAACGTTACGTTGATTCACGATCTCTACGACTACTCCCGTTGA

mRNA sequence

ATGGCCGTTTCCAGCAAGATTTTGGTGATTTCTATGGCGATTCTCGTAGCTGTTTGTTCAACTGAAGCGTTAGACCCTAATGTGACCCGGATTCAGTTCTACATGCATGATATCGTGAGTGGTCCGAACCCCACCGCGATTCAAGTCGCCGGCCGGCAGACGAACTATGCTGGTACGGATCCAATCGCCGCCATGTTTGGGTCTGTTTTCATGATGGATAACCCACTCACGGTGACGCCGGAGTTGAACTCGACGTTGATAGGTCGTGCTCAGGGGATTTATGCAATGTCGGCGCAGCAGAATGAGTTCAGCCTTTTGATGACGCTTACCTTCGGGATGACCGGCGGACAGTACAACGGTAGCTCGTTCAGCGTCGTTGGGCGGAATCCCATCATGAACGAAGTCCGGGAGATGCCGGTCGTCGGAGGGACGGGGATTTTCCGGCTGGTTCGTGGGTATTGCTTAGCTAGGACATTCTCTTTCAGGAATATGGATGCTGTGATTGGCTACAACGTTACGTTGATTCACGATCTCTACGACTACTCCCGTTGA

Coding sequence (CDS)

ATGGCCGTTTCCAGCAAGATTTTGGTGATTTCTATGGCGATTCTCGTAGCTGTTTGTTCAACTGAAGCGTTAGACCCTAATGTGACCCGGATTCAGTTCTACATGCATGATATCGTGAGTGGTCCGAACCCCACCGCGATTCAAGTCGCCGGCCGGCAGACGAACTATGCTGGTACGGATCCAATCGCCGCCATGTTTGGGTCTGTTTTCATGATGGATAACCCACTCACGGTGACGCCGGAGTTGAACTCGACGTTGATAGGTCGTGCTCAGGGGATTTATGCAATGTCGGCGCAGCAGAATGAGTTCAGCCTTTTGATGACGCTTACCTTCGGGATGACCGGCGGACAGTACAACGGTAGCTCGTTCAGCGTCGTTGGGCGGAATCCCATCATGAACGAAGTCCGGGAGATGCCGGTCGTCGGAGGGACGGGGATTTTCCGGCTGGTTCGTGGGTATTGCTTAGCTAGGACATTCTCTTTCAGGAATATGGATGCTGTGATTGGCTACAACGTTACGTTGATTCACGATCTCTACGACTACTCCCGTTGA

Protein sequence

MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTDPIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNGSSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIHDLYDYSR

Homology

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BLAST of CsaV3_1G003340 vs. NCBI nr
Match: KGN63770.1 (hypothetical protein Csa_1G015640 [Cucumis sativus])

HSP 1 Score: 362.1 bits (928), Expect = 1.1e-96
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTD 60
           MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTD
Sbjct: 1   MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTD 60

Query: 61  PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNG 120
           PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNG
Sbjct: 61  PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNG 120

Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIHDLYD 180
           SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIHDLYD
Sbjct: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIHDLYD 180

Query: 181 YSR 184
           YSR
Sbjct: 181 YSR 183

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BLAST of CsaV3_1G003340 vs. NCBI nr
Match: XP_022135557.1 (dirigent protein 22-like [Momordica charantia])

HSP 1 Score: 318.2 bits (814), Expect = 1.9e-83
Identity = 160/182 (87.91%), Postives = 169/182 (92.86%), Query Frame = 0


Query: 1   MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTD 60
           MAVS K L+IS+AILVA  S EAL+PNVTRIQFYMHDIVSGPN TA+QVAGR+TNY G+D
Sbjct: 1   MAVSRKSLLISLAILVAAHSIEALNPNVTRIQFYMHDIVSGPNATAVQVAGRRTNYTGSD 60

Query: 61  PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNG 120
           PIAAMFGSVFMMDNPLT TPELNSTLIGRAQGIYAMS+QQNEFSLLMTLTF +TGG YNG
Sbjct: 61  PIAAMFGSVFMMDNPLTATPELNSTLIGRAQGIYAMSSQQNEFSLLMTLTFAITGGTYNG 120

Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIHDLYD 180
           SSFSVVGRNPIM+EVREMPVVGGTG FRL RGYCLARTFSFR MDAVIGYNVTLIHDLYD
Sbjct: 121 SSFSVVGRNPIMSEVREMPVVGGTGAFRLARGYCLARTFSFREMDAVIGYNVTLIHDLYD 180

Query: 181 YS 183
           YS
Sbjct: 181 YS 182

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BLAST of CsaV3_1G003340 vs. NCBI nr
Match: XP_023878470.1 (dirigent protein 22-like [Quercus suber] >POE78259.1 dirigent protein 23 [Quercus suber])

HSP 1 Score: 260.4 bits (664), Expect = 4.7e-66
Identity = 132/178 (74.16%), Postives = 149/178 (83.71%), Query Frame = 0


Query: 1   MAVSSKILVISMAILVAVCST--EALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAG 60
           MAV SK LV+ +A+LVA C+T  EAL    T IQFYMHDIV GP PTA+QVA R +NY G
Sbjct: 1   MAVPSK-LVLLIAVLVASCTTDAEALKHKKTHIQFYMHDIVGGPKPTAVQVARRLSNYTG 60

Query: 61  TDPIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQY 120
           +DPIAAMFGSV +MDNPLTVTP  NST+IGRAQGIYAM++Q NEFSLLMTLT+G   G Y
Sbjct: 61  SDPIAAMFGSVSVMDNPLTVTPNPNSTVIGRAQGIYAMASQHNEFSLLMTLTYGFISGPY 120

Query: 121 NGSSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIH 177
           NGSSFSVVGRNP+MNEVREMP+VGGTGIFRL RGYC ART+S   MDAVIGYNVT++H
Sbjct: 121 NGSSFSVVGRNPVMNEVREMPIVGGTGIFRLARGYCFARTYSMNQMDAVIGYNVTILH 177

[Close]

BLAST of CsaV3_1G003340 vs. NCBI nr
Match: XP_021286251.1 (dirigent protein 22-like [Herrania umbratica])

HSP 1 Score: 255.4 bits (651), Expect = 1.5e-64
Identity = 125/176 (71.02%), Postives = 151/176 (85.80%), Query Frame = 0


Query: 1   MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTD 60
           MA +SK L++ +A++ AV +T+A+   VTR QFYMHDIV GP PTA++VAGR +N+ G D
Sbjct: 1   MAYASKFLLL-IALVAAVYNTDAVKQKVTRFQFYMHDIVGGPEPTAVRVAGR-SNFTGQD 60

Query: 61  PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNG 120
           PIAA FGS+FMMDNPLTVTP +NSTL+GRAQG+YAMS+QQ EFSLLMTLT+  T G YNG
Sbjct: 61  PIAATFGSIFMMDNPLTVTPNINSTLVGRAQGMYAMSSQQKEFSLLMTLTYAFTSGPYNG 120

Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIH 177
           S+FSV+GRNP+MNEVREMPVVGGTG FRL RGYCLAR++S + MDAVIGYNVTL+H
Sbjct: 121 STFSVLGRNPVMNEVREMPVVGGTGKFRLARGYCLARSYSMKEMDAVIGYNVTLLH 174

[Close]

BLAST of CsaV3_1G003340 vs. NCBI nr
Match: XP_010260988.1 (PREDICTED: dirigent protein 22-like [Nelumbo nucifera])

HSP 1 Score: 253.8 bits (647), Expect = 4.4e-64
Identity = 120/170 (70.59%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 7   ILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTDPIAAMF 66
           +L++  A+     +TEAL P +T IQFYMHDIV GPNPTA+QVAGR +N   +DPIA+ F
Sbjct: 16  LLILVAALWPLSTTTEALKPRITNIQFYMHDIVGGPNPTAVQVAGRLSNITSSDPIASSF 75

Query: 67  GSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNGSSFSVV 126
           GS+F+MDNPLT TP++NSTL+GRAQG+YAMS+QQNEFSLLMTLT+    G YNGSSFSVV
Sbjct: 76  GSIFVMDNPLTATPDINSTLMGRAQGLYAMSSQQNEFSLLMTLTYAFVSGPYNGSSFSVV 135

Query: 127 GRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIH 177
           GRNP+MNEVREMP+VGGTGIFRL RGYCLA+T S    DAVIGYN TLIH
Sbjct: 136 GRNPVMNEVREMPIVGGTGIFRLARGYCLAKTHSMAGFDAVIGYNATLIH 185

[Close]

BLAST of CsaV3_1G003340 vs. TAIR10
Match: AT2G21100.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.4e-35
Identity = 72/151 (47.68%), Postives = 103/151 (68.21%), Query Frame = 0


Query: 28  VTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTDPIAAMFGSVFMMDNPLTVTPELNSTLI 87
           VT +QFY HD +SG NPTA++VA        T+    +FG+VFM+D+ LT T +  S L+
Sbjct: 42  VTNLQFYFHDTLSGKNPTAVKVA----QGTDTEKSPTLFGAVFMVDDALTETADPKSKLV 101

Query: 88  GRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNGSSFSVVGRNPIMNEVREMPVVGGTGIF 147
           GRAQG+Y  S ++ E  L+M ++F    G Y  S+ S++G+N  MN +REMP+VGGTG+F
Sbjct: 102 GRAQGLYGSSCKE-EVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVGGTGMF 161

Query: 148 RLVRGYCLART--FSFRNMDAVIGYNVTLIH 177
           R+ RGY +ART  F  +  DA++GYNVT++H
Sbjct: 162 RMARGYAIARTNWFDPKTGDAIVGYNVTIMH 187

[Close]

BLAST of CsaV3_1G003340 vs. TAIR10
Match: AT1G22900.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 141.7 bits (356), Expect = 4.4e-34
Identity = 70/149 (46.98%), Postives = 97/149 (65.10%), Query Frame = 0


Query: 28  VTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTDPIAAMFGSVFMMDNPLTVTPELNSTLI 87
           +T + FY HDI+SG  PT I+VA       GT+  A +FG+V ++D P+T  PEL+S  +
Sbjct: 50  LTHLHFYFHDIISGDKPTTIRVA----EAPGTNSSATVFGAVLIVDAPVTEGPELSSKEV 109

Query: 88  GRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNGSSFSVVGRNPIMNEVREMPVVGGTGIF 147
           GRAQG+YA S     F   M   F  T G++NGS+ ++ GRNPI+ E RE+P++GGTG F
Sbjct: 110 GRAQGLYA-STDMKTFGFTMVFNFVFTEGEFNGSTAALYGRNPILLEERELPIIGGTGDF 169

Query: 148 RLVRGYCLARTFSFRNMDAVIGYNVTLIH 177
           R  RGY L +T+   N+DAV+ YNV + H
Sbjct: 170 RFARGYALPKTYKVVNIDAVVEYNVFIWH 193

[Close]

BLAST of CsaV3_1G003340 vs. TAIR10
Match: AT1G65870.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 139.8 bits (351), Expect = 1.7e-33
Identity = 73/151 (48.34%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 28  VTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTDPIAAMFGSVFMMDNPLTVTPELNSTLI 87
           +T + FY HDIVSG  PT++QVA   T    T+  A  FG V ++D+ LTV PE+ S  +
Sbjct: 44  LTHLHFYFHDIVSGDKPTSVQVANGPT----TNSSATGFGLVAVVDDKLTVGPEITSEEV 103

Query: 88  GRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNGSSFSVVGRNPIMNEVREMPVVGGTGIF 147
           GRAQG+YA SA QN+  LLM      T G+++ S+ ++ GRNP++++VREMP++GGTG F
Sbjct: 104 GRAQGMYA-SADQNKLGLLMAFNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAF 163

Query: 148 RLVRGYCLART--FSFRNMDAVIGYNVTLIH 177
           R  RGY LA+T  F+  + DAV+ YNV + H
Sbjct: 164 RFGRGYALAKTLVFNITSGDAVVEYNVYIWH 189

[Close]

BLAST of CsaV3_1G003340 vs. TAIR10
Match: AT5G42500.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 137.5 bits (345), Expect = 8.3e-33
Identity = 66/149 (44.30%), Postives = 98/149 (65.77%), Query Frame = 0


Query: 29  TRIQFYMHDIVSGPNPTAIQVA-GRQTNYAGTDPIAAMFGSVFMMDNPLTVTPELNSTLI 88
           T + FY HD++SG  PTA++VA  R+TN +  +     FG + + D+PLT  P+ +S  +
Sbjct: 43  THLHFYFHDVISGDKPTAVKVAEARRTNSSNVN-----FGVIMIADDPLTEGPDPSSKEV 102

Query: 89  GRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNGSSFSVVGRNPIMNEVREMPVVGGTGIF 148
           GRAQG+YA++A +N  S  M      T G++NGS+ ++ GRN I ++VREMP++GGTG F
Sbjct: 103 GRAQGMYALTAMKN-ISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAF 162

Query: 149 RLVRGYCLARTFSFRNMDAVIGYNVTLIH 177
           R  RGY  A+T+    +DAV+ YNV + H
Sbjct: 163 RFARGYAQAKTYKVVGLDAVVEYNVFIWH 185

[Close]

BLAST of CsaV3_1G003340 vs. TAIR10
Match: AT1G55210.1 (Disease resistance-responsive (dirigent-like protein) family protein)

HSP 1 Score: 136.0 bits (341), Expect = 2.4e-32
Identity = 67/151 (44.37%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 28  VTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTDPIAAMFGSVFMMDNPLTVTPELNSTLI 87
           +T  + Y HDI+SGPNPT+I +    TN       ++ FG++ M+DN LT    +NST++
Sbjct: 44  LTHFKVYWHDILSGPNPTSIMIQPPVTN-------SSYFGAISMIDNALTAKVPMNSTVL 103

Query: 88  GRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNGSSFSVVGRNPIMNEVREMPVVGGTGIF 147
           G+AQG YA  A Q E   LM + F    G+YNGS+ +++GRN  ++EVREMP+VGG+G+F
Sbjct: 104 GQAQGFYA-GAAQKELGFLMAMNFAFKTGKYNGSTITILGRNTALSEVREMPIVGGSGLF 163

Query: 148 RLVRGYCLART--FSFRNMDAVIGYNVTLIH 177
           R  RGY  ART   + +N DA + Y+  ++H
Sbjct: 164 RFARGYVEARTKWINLKNGDATVEYSCYVLH 186

[Close]

BLAST of CsaV3_1G003340 vs. Swiss-Prot
Match: sp|Q84TH6|DIR23_ARATH (Dirigent protein 23 OS=Arabidopsis thaliana OX=3702 GN=DIR23 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.5e-34
Identity = 72/151 (47.68%), Postives = 103/151 (68.21%), Query Frame = 0


Query: 28  VTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTDPIAAMFGSVFMMDNPLTVTPELNSTLI 87
           VT +QFY HD +SG NPTA++VA        T+    +FG+VFM+D+ LT T +  S L+
Sbjct: 42  VTNLQFYFHDTLSGKNPTAVKVA----QGTDTEKSPTLFGAVFMVDDALTETADPKSKLV 101

Query: 88  GRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNGSSFSVVGRNPIMNEVREMPVVGGTGIF 147
           GRAQG+Y  S ++ E  L+M ++F    G Y  S+ S++G+N  MN +REMP+VGGTG+F
Sbjct: 102 GRAQGLYGSSCKE-EVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVGGTGMF 161

Query: 148 RLVRGYCLART--FSFRNMDAVIGYNVTLIH 177
           R+ RGY +ART  F  +  DA++GYNVT++H
Sbjct: 162 RMARGYAIARTNWFDPKTGDAIVGYNVTIMH 187

[Close]

BLAST of CsaV3_1G003340 vs. Swiss-Prot
Match: sp|Q67YM6|DIR11_ARATH (Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 7.9e-33
Identity = 70/149 (46.98%), Postives = 97/149 (65.10%), Query Frame = 0


Query: 28  VTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTDPIAAMFGSVFMMDNPLTVTPELNSTLI 87
           +T + FY HDI+SG  PT I+VA       GT+  A +FG+V ++D P+T  PEL+S  +
Sbjct: 50  LTHLHFYFHDIISGDKPTTIRVA----EAPGTNSSATVFGAVLIVDAPVTEGPELSSKEV 109

Query: 88  GRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNGSSFSVVGRNPIMNEVREMPVVGGTGIF 147
           GRAQG+YA S     F   M   F  T G++NGS+ ++ GRNPI+ E RE+P++GGTG F
Sbjct: 110 GRAQGLYA-STDMKTFGFTMVFNFVFTEGEFNGSTAALYGRNPILLEERELPIIGGTGDF 169

Query: 148 RLVRGYCLARTFSFRNMDAVIGYNVTLIH 177
           R  RGY L +T+   N+DAV+ YNV + H
Sbjct: 170 RFARGYALPKTYKVVNIDAVVEYNVFIWH 193

[Close]

BLAST of CsaV3_1G003340 vs. Swiss-Prot
Match: sp|Q9SS03|DIR21_ARATH (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.0e-32
Identity = 73/151 (48.34%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 28  VTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTDPIAAMFGSVFMMDNPLTVTPELNSTLI 87
           +T + FY HDIVSG  PT++QVA   T    T+  A  FG V ++D+ LTV PE+ S  +
Sbjct: 44  LTHLHFYFHDIVSGDKPTSVQVANGPT----TNSSATGFGLVAVVDDKLTVGPEITSEEV 103

Query: 88  GRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNGSSFSVVGRNPIMNEVREMPVVGGTGIF 147
           GRAQG+YA SA QN+  LLM      T G+++ S+ ++ GRNP++++VREMP++GGTG F
Sbjct: 104 GRAQGMYA-SADQNKLGLLMAFNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAF 163

Query: 148 RLVRGYCLART--FSFRNMDAVIGYNVTLIH 177
           R  RGY LA+T  F+  + DAV+ YNV + H
Sbjct: 164 RFGRGYALAKTLVFNITSGDAVVEYNVYIWH 189

[Close]

BLAST of CsaV3_1G003340 vs. Swiss-Prot
Match: sp|Q9FIG7|DIR2_ARATH (Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-31
Identity = 66/149 (44.30%), Postives = 98/149 (65.77%), Query Frame = 0


Query: 29  TRIQFYMHDIVSGPNPTAIQVA-GRQTNYAGTDPIAAMFGSVFMMDNPLTVTPELNSTLI 88
           T + FY HD++SG  PTA++VA  R+TN +  +     FG + + D+PLT  P+ +S  +
Sbjct: 43  THLHFYFHDVISGDKPTAVKVAEARRTNSSNVN-----FGVIMIADDPLTEGPDPSSKEV 102

Query: 89  GRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNGSSFSVVGRNPIMNEVREMPVVGGTGIF 148
           GRAQG+YA++A +N  S  M      T G++NGS+ ++ GRN I ++VREMP++GGTG F
Sbjct: 103 GRAQGMYALTAMKN-ISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAF 162

Query: 149 RLVRGYCLARTFSFRNMDAVIGYNVTLIH 177
           R  RGY  A+T+    +DAV+ YNV + H
Sbjct: 163 RFARGYAQAKTYKVVGLDAVVEYNVFIWH 185

[Close]

BLAST of CsaV3_1G003340 vs. Swiss-Prot
Match: sp|Q9C891|DIR20_ARATH (Dirigent protein 20 OS=Arabidopsis thaliana OX=3702 GN=DIR20 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.3e-31
Identity = 67/151 (44.37%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 28  VTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTDPIAAMFGSVFMMDNPLTVTPELNSTLI 87
           +T  + Y HDI+SGPNPT+I +    TN       ++ FG++ M+DN LT    +NST++
Sbjct: 44  LTHFKVYWHDILSGPNPTSIMIQPPVTN-------SSYFGAISMIDNALTAKVPMNSTVL 103

Query: 88  GRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNGSSFSVVGRNPIMNEVREMPVVGGTGIF 147
           G+AQG YA  A Q E   LM + F    G+YNGS+ +++GRN  ++EVREMP+VGG+G+F
Sbjct: 104 GQAQGFYA-GAAQKELGFLMAMNFAFKTGKYNGSTITILGRNTALSEVREMPIVGGSGLF 163

Query: 148 RLVRGYCLART--FSFRNMDAVIGYNVTLIH 177
           R  RGY  ART   + +N DA + Y+  ++H
Sbjct: 164 RFARGYVEARTKWINLKNGDATVEYSCYVLH 186

[Close]

BLAST of CsaV3_1G003340 vs. TrEMBL
Match: tr|A0A0A0LPF3|A0A0A0LPF3_CUCSA (Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_1G015640 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.5e-97
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTD 60
           MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTD
Sbjct: 1   MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTD 60

Query: 61  PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNG 120
           PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNG
Sbjct: 61  PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNG 120

Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIHDLYD 180
           SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIHDLYD
Sbjct: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIHDLYD 180

Query: 181 YSR 184
           YSR
Sbjct: 181 YSR 183

[Close]

BLAST of CsaV3_1G003340 vs. TrEMBL
Match: tr|A0A2P4JBZ1|A0A2P4JBZ1_QUESU (Dirigent protein OS=Quercus suber OX=58331 GN=CFP56_62653 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.1e-66
Identity = 132/178 (74.16%), Postives = 149/178 (83.71%), Query Frame = 0


Query: 1   MAVSSKILVISMAILVAVCST--EALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAG 60
           MAV SK LV+ +A+LVA C+T  EAL    T IQFYMHDIV GP PTA+QVA R +NY G
Sbjct: 1   MAVPSK-LVLLIAVLVASCTTDAEALKHKKTHIQFYMHDIVGGPKPTAVQVARRLSNYTG 60

Query: 61  TDPIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQY 120
           +DPIAAMFGSV +MDNPLTVTP  NST+IGRAQGIYAM++Q NEFSLLMTLT+G   G Y
Sbjct: 61  SDPIAAMFGSVSVMDNPLTVTPNPNSTVIGRAQGIYAMASQHNEFSLLMTLTYGFISGPY 120

Query: 121 NGSSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIH 177
           NGSSFSVVGRNP+MNEVREMP+VGGTGIFRL RGYC ART+S   MDAVIGYNVT++H
Sbjct: 121 NGSSFSVVGRNPVMNEVREMPIVGGTGIFRLARGYCFARTYSMNQMDAVIGYNVTILH 177

[Close]

BLAST of CsaV3_1G003340 vs. TrEMBL
Match: tr|A0A2N9J8S7|A0A2N9J8S7_FAGSY (Dirigent protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60741 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 7.6e-65
Identity = 125/176 (71.02%), Postives = 146/176 (82.95%), Query Frame = 0


Query: 1   MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTD 60
           + +SSK++++   ++ A  +TEAL    TR QFYMHDIV GPNPTAI+VAGR +NY G+D
Sbjct: 3   LVLSSKLVLLIAVLVFASYTTEALKSKTTRTQFYMHDIVGGPNPTAIRVAGRLSNYTGSD 62

Query: 61  PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNG 120
           PIAAMFGS+ +MDNPLTVTP  NST+IGRAQGIYAMS+Q +EFSLLMTLT     G YNG
Sbjct: 63  PIAAMFGSISVMDNPLTVTPNPNSTVIGRAQGIYAMSSQHDEFSLLMTLTIKFISGAYNG 122

Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIH 177
           SSFSVVGRNP+MNEVREMP+VGGTGIFRL RGYC ART+S   MDAVIGYNVTL+H
Sbjct: 123 SSFSVVGRNPVMNEVREMPIVGGTGIFRLARGYCFARTYSMDQMDAVIGYNVTLLH 178

[Close]

BLAST of CsaV3_1G003340 vs. TrEMBL
Match: tr|A0A1U8A1V1|A0A1U8A1V1_NELNU (Dirigent protein OS=Nelumbo nucifera OX=4432 GN=LOC104599928 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.9e-64
Identity = 120/170 (70.59%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 7   ILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTDPIAAMF 66
           +L++  A+     +TEAL P +T IQFYMHDIV GPNPTA+QVAGR +N   +DPIA+ F
Sbjct: 16  LLILVAALWPLSTTTEALKPRITNIQFYMHDIVGGPNPTAVQVAGRLSNITSSDPIASSF 75

Query: 67  GSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNGSSFSVV 126
           GS+F+MDNPLT TP++NSTL+GRAQG+YAMS+QQNEFSLLMTLT+    G YNGSSFSVV
Sbjct: 76  GSIFVMDNPLTATPDINSTLMGRAQGLYAMSSQQNEFSLLMTLTYAFVSGPYNGSSFSVV 135

Query: 127 GRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIH 177
           GRNP+MNEVREMP+VGGTGIFRL RGYCLA+T S    DAVIGYN TLIH
Sbjct: 136 GRNPVMNEVREMPIVGGTGIFRLARGYCLAKTHSMAGFDAVIGYNATLIH 185

[Close]

BLAST of CsaV3_1G003340 vs. TrEMBL
Match: tr|A0A2H5Q4N9|A0A2H5Q4N9_CITUN (Dirigent protein OS=Citrus unshiu OX=55188 GN=CUMW_195780 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.1e-63
Identity = 125/176 (71.02%), Postives = 149/176 (84.66%), Query Frame = 0


Query: 1   MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTD 60
           MA+S K L + + +L   C+TEA+   VTR+QFYMHDIVSGPN TA+ VAGR +N+   D
Sbjct: 1   MALSGKFLFL-VGVLTLFCTTEAMKSKVTRMQFYMHDIVSGPNATAVPVAGR-SNFTSPD 60

Query: 61  PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNG 120
           PI A+FGSVF+MDNPLT+TP+ NST+IGRAQGIYAMS+QQ+EFSLLMTLT+G T G YNG
Sbjct: 61  PIKAVFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNG 120

Query: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIH 177
           SSFSV+GRNP+M+EVREMP+VGGTGIFRL RGYCLA+T S   MDAVIGYNVTL+H
Sbjct: 121 SSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLLH 174

The following BLAST results are available for this feature:

BLAST of CsaV3_1G003340 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63770.1	1.1e-96	100.00	hypothetical protein Csa_1G015640 [Cucumis sativus]	[more]
XP_022135557.1	1.9e-83	87.91	dirigent protein 22-like [Momordica charantia]	[more]
XP_023878470.1	4.7e-66	74.16	dirigent protein 22-like [Quercus suber] >POE78259.1 dirigent protein 23 [Quercu...	[more]
XP_021286251.1	1.5e-64	71.02	dirigent protein 22-like [Herrania umbratica]	[more]
XP_010260988.1	4.4e-64	70.59	PREDICTED: dirigent protein 22-like [Nelumbo nucifera]	[more]

BLAST of CsaV3_1G003340 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21100.1	1.4e-35	47.68	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G22900.1	4.4e-34	46.98	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G65870.1	1.7e-33	48.34	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT5G42500.1	8.3e-33	44.30	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G55210.1	2.4e-32	44.37	Disease resistance-responsive (dirigent-like protein) family protein	[more]

BLAST of CsaV3_1G003340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84TH6\|DIR23_ARATH	2.5e-34	47.68	Dirigent protein 23 OS=Arabidopsis thaliana OX=3702 GN=DIR23 PE=2 SV=1	[more]
sp\|Q67YM6\|DIR11_ARATH	7.9e-33	46.98	Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1	[more]
sp\|Q9SS03\|DIR21_ARATH	3.0e-32	48.34	Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1	[more]
sp\|Q9FIG7\|DIR2_ARATH	1.5e-31	44.30	Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1	[more]
sp\|Q9C891\|DIR20_ARATH	4.3e-31	44.37	Dirigent protein 20 OS=Arabidopsis thaliana OX=3702 GN=DIR20 PE=2 SV=1	[more]

BLAST of CsaV3_1G003340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LPF3\|A0A0A0LPF3_CUCSA	7.5e-97	100.00	Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_1G015640 PE=3 SV=1	[more]
tr\|A0A2P4JBZ1\|A0A2P4JBZ1_QUESU	3.1e-66	74.16	Dirigent protein OS=Quercus suber OX=58331 GN=CFP56_62653 PE=3 SV=1	[more]
tr\|A0A2N9J8S7\|A0A2N9J8S7_FAGSY	7.6e-65	71.02	Dirigent protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60741 PE=3 SV=1	[more]
tr\|A0A1U8A1V1\|A0A1U8A1V1_NELNU	2.9e-64	70.59	Dirigent protein OS=Nelumbo nucifera OX=4432 GN=LOC104599928 PE=3 SV=1	[more]
tr\|A0A2H5Q4N9\|A0A2H5Q4N9_CITUN	1.1e-63	71.02	Dirigent protein OS=Citrus unshiu OX=55188 GN=CUMW_195780 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004265	Dirigent

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G003340.1	CsaV3_1G003340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004265	Dirigent protein	PFAM	PF03018	Dirigent	coord: 29..174 e-value: 5.0E-49 score: 165.8
None	No IPR available	PANTHER	PTHR21495:SF72	SUBFAMILY NOT NAMED	coord: 1..176
None	No IPR available	PANTHER	PTHR21495	NUCLEOPORIN-RELATED	coord: 1..176

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G003340	CSPI01G03300	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G003340	Cucsa.198590	Cucumber (Gy14) v1	cgycucB314
CsaV3_1G003340	CmaCh10G002830	Cucurbita maxima (Rimu)	cmacucB0061
CsaV3_1G003340	Cla019036	Watermelon (97103) v1	cucwmB094
CsaV3_1G003340	MELO3C017251	Melon (DHL92) v3.5.1	cucmeB046
CsaV3_1G003340	ClCG06G015440	Watermelon (Charleston Gray)	cucwcgB077
CsaV3_1G003340	Lsi06G013920	Bottle gourd (USVL1VR-Ls)	cuclsiB071
CsaV3_1G003340	MELO3C017251.2	Melon (DHL92) v3.6.1	cucmedB043
CsaV3_1G003340	Cla97C06G124960	Watermelon (97103) v2	cucwmbB066

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G003340	Cucumber (Chinese Long) v3	cuccucB000
CsaV3_1G003340	Cucumber (Chinese Long) v3	cuccucB004
CsaV3_1G003340	Silver-seed gourd	carcucB0419
CsaV3_1G003340	Silver-seed gourd	carcucB0494
CsaV3_1G003340	Silver-seed gourd	carcucB0497
CsaV3_1G003340	Silver-seed gourd	carcucB0549
CsaV3_1G003340	Silver-seed gourd	carcucB0627
CsaV3_1G003340	Silver-seed gourd	carcucB0629
CsaV3_1G003340	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G003340	Cucumber (Gy14) v2	cgybcucB003
CsaV3_1G003340	Cucumber (Gy14) v2	cgybcucB013
CsaV3_1G003340	Cucumber (Gy14) v1	cgycucB146
CsaV3_1G003340	Cucumber (Gy14) v1	cgycucB436
CsaV3_1G003340	Cucurbita maxima (Rimu)	cmacucB0101
CsaV3_1G003340	Cucurbita maxima (Rimu)	cmacucB0115
CsaV3_1G003340	Cucurbita maxima (Rimu)	cmacucB0244
CsaV3_1G003340	Cucurbita maxima (Rimu)	cmacucB0252
CsaV3_1G003340	Cucurbita maxima (Rimu)	cmacucB0466
CsaV3_1G003340	Cucurbita moschata (Rifu)	cmocucB0047
CsaV3_1G003340	Cucurbita moschata (Rifu)	cmocucB0091
CsaV3_1G003340	Cucurbita moschata (Rifu)	cmocucB0103
CsaV3_1G003340	Cucurbita moschata (Rifu)	cmocucB0230
CsaV3_1G003340	Cucurbita moschata (Rifu)	cmocucB0463
CsaV3_1G003340	Cucurbita pepo (Zucchini)	cpecucB0033
CsaV3_1G003340	Cucurbita pepo (Zucchini)	cpecucB0431
CsaV3_1G003340	Cucurbita pepo (Zucchini)	cpecucB0445
CsaV3_1G003340	Cucurbita pepo (Zucchini)	cpecucB0474
CsaV3_1G003340	Cucurbita pepo (Zucchini)	cpecucB0627
CsaV3_1G003340	Cucurbita pepo (Zucchini)	cpecucB0642
CsaV3_1G003340	Cucurbita pepo (Zucchini)	cpecucB0798
CsaV3_1G003340	Wild cucumber (PI 183967)	cpicucB002
CsaV3_1G003340	Wild cucumber (PI 183967)	cpicucB016
CsaV3_1G003340	Bottle gourd (USVL1VR-Ls)	cuclsiB024
CsaV3_1G003340	Bottle gourd (USVL1VR-Ls)	cuclsiB042
CsaV3_1G003340	Melon (DHL92) v3.5.1	cucmeB006
CsaV3_1G003340	Melon (DHL92) v3.5.1	cucmeB020
CsaV3_1G003340	Melon (DHL92) v3.5.1	cucmeB026
CsaV3_1G003340	Melon (DHL92) v3.6.1	cucmedB018
CsaV3_1G003340	Melon (DHL92) v3.6.1	cucmedB024
CsaV3_1G003340	Watermelon (Charleston Gray)	cucwcgB062
CsaV3_1G003340	Watermelon (Charleston Gray)	cucwcgB064
CsaV3_1G003340	Watermelon (97103) v1	cucwmB069
CsaV3_1G003340	Watermelon (97103) v1	cucwmB071
CsaV3_1G003340	Watermelon (97103) v2	cucwmbB053
CsaV3_1G003340	Watermelon (97103) v2	cucwmbB055
CsaV3_1G003340	Wax gourd	cucwgoB046
CsaV3_1G003340	Wax gourd	cucwgoB088