CsaV3_1G002590 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G002590
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 1612757 .. 1613045 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGAGATAAATATTGGATGCTGACTGACTTATCTTCGCCAAGCAAAGGTATTCTCTATGCTGGTAGGTGCAATTCTTATGATGGATTTGGCTCCTCCGGCAGAGTTATTCAGAAGAGTATTTTCAGTCCTAGATCAGTGTTTTGATTAAAAGTAGGCAATTTGGTTTCGGCTTTGACAACGTATGCATTTGGCATAAAATTTTTGGGCAGAGAACAAATGCGTCGAAATTGCATCCCCCTCGAAGTCCAGCCATAGCACGAAACCATGTACAGAGCTTCTCTAA

mRNA sequence

ATGGAGAGAGATAAATATTGGATGCTGACTGACTTATCTTCGCCAAGCAAAGGTATTCTCTATGCTGGTAGGTGCAATTCTTATGATGGATTTGGCTCCTCCGGCAGAGTTATTCAGAAGAAGAACAAATGCGTCGAAATTGCATCCCCCTCGAAGTCCAGCCATAGCACGAAACCATGTACAGAGCTTCTCTAA

Coding sequence (CDS)

ATGGAGAGAGATAAATATTGGATGCTGACTGACTTATCTTCGCCAAGCAAAGGTATTCTCTATGCTGGTAGGTGCAATTCTTATGATGGATTTGGCTCCTCCGGCAGAGTTATTCAGAAGAAGAACAAATGCGTCGAAATTGCATCCCCCTCGAAGTCCAGCCATAGCACGAAACCATGTACAGAGCTTCTCTAA

Protein sequence

MERDKYWMLTDLSSPSKGILYAGRCNSYDGFGSSGRVIQKKNKCVEIASPSKSSHSTKPCTELL
Homology
[Close]
BLAST of CsaV3_1G002590 vs. NCBI nr
Match: KGN63694.1 (hypothetical protein Csa_1G011460 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 4.7e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MERDKYWMLTDLSSPSKGILYAGRCNSYDGFGSSGRVIQKKNKCVEIASPSKSSHSTKPC 60
          MERDKYWMLTDLSSPSKGILYAGRCNSYDGFGSSGRVIQKKNKCVEIASPSKSSHSTKPC
Sbjct: 1  MERDKYWMLTDLSSPSKGILYAGRCNSYDGFGSSGRVIQKKNKCVEIASPSKSSHSTKPC 60

Query: 61 TELL 65
          TELL
Sbjct: 61 TELL 64

[Close]
BLAST of CsaV3_1G002590 vs. TrEMBL
Match: tr|A0A0A0LRR2|A0A0A0LRR2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G011460 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.1e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MERDKYWMLTDLSSPSKGILYAGRCNSYDGFGSSGRVIQKKNKCVEIASPSKSSHSTKPC 60
          MERDKYWMLTDLSSPSKGILYAGRCNSYDGFGSSGRVIQKKNKCVEIASPSKSSHSTKPC
Sbjct: 1  MERDKYWMLTDLSSPSKGILYAGRCNSYDGFGSSGRVIQKKNKCVEIASPSKSSHSTKPC 60

Query: 61 TELL 65
          TELL
Sbjct: 61 TELL 64

The following BLAST results are available for this feature:
BLAST of CsaV3_1G002590 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63694.14.7e-29100.00hypothetical protein Csa_1G011460 [Cucumis sativus][more]
BLAST of CsaV3_1G002590 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G002590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G002590 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRR2|A0A0A0LRR2_CUCSA3.1e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G011460 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G002590.1CsaV3_1G002590.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G002590Wax gourdcucwgoB056
CsaV3_1G002590Wax gourdcucwgoB076
CsaV3_1G002590Wax gourdcucwgoB103
CsaV3_1G002590Wax gourdcucwgoB125
CsaV3_1G002590Cucumber (Chinese Long) v3cuccucB000
CsaV3_1G002590Cucumber (Chinese Long) v3cuccucB035
CsaV3_1G002590Silver-seed gourdcarcucB0059
CsaV3_1G002590Silver-seed gourdcarcucB0419
CsaV3_1G002590Silver-seed gourdcarcucB0496
CsaV3_1G002590Silver-seed gourdcarcucB0646
CsaV3_1G002590Melon (DHL92) v3.5.1cucmeB053
CsaV3_1G002590Cucumber (Gy14) v2cgybcucB002
CsaV3_1G002590Cucumber (Gy14) v2cgybcucB003
CsaV3_1G002590Cucumber (Gy14) v1cgycucB144
CsaV3_1G002590Cucumber (Gy14) v1cgycucB314
CsaV3_1G002590Cucumber (Gy14) v1cgycucB435
CsaV3_1G002590Cucurbita maxima (Rimu)cmacucB0058
CsaV3_1G002590Cucurbita maxima (Rimu)cmacucB0112
CsaV3_1G002590Cucurbita maxima (Rimu)cmacucB0252
CsaV3_1G002590Cucurbita maxima (Rimu)cmacucB0482
CsaV3_1G002590Cucurbita maxima (Rimu)cmacucB0514
CsaV3_1G002590Cucurbita maxima (Rimu)cmacucB0814
CsaV3_1G002590Cucurbita moschata (Rifu)cmocucB0242
CsaV3_1G002590Cucurbita moschata (Rifu)cmocucB0044
CsaV3_1G002590Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G002590Cucurbita moschata (Rifu)cmocucB0502
CsaV3_1G002590Cucurbita moschata (Rifu)cmocucB0798
CsaV3_1G002590Cucurbita pepo (Zucchini)cpecucB0027
CsaV3_1G002590Cucurbita pepo (Zucchini)cpecucB0442
CsaV3_1G002590Cucurbita pepo (Zucchini)cpecucB0470
CsaV3_1G002590Cucurbita pepo (Zucchini)cpecucB0667
CsaV3_1G002590Cucurbita pepo (Zucchini)cpecucB0814
CsaV3_1G002590Wild cucumber (PI 183967)cpicucB001
CsaV3_1G002590Wild cucumber (PI 183967)cpicucB002
CsaV3_1G002590Wild cucumber (PI 183967)cpicucB254
CsaV3_1G002590Bottle gourd (USVL1VR-Ls)cuclsiB061
CsaV3_1G002590Bottle gourd (USVL1VR-Ls)cuclsiB024
CsaV3_1G002590Bottle gourd (USVL1VR-Ls)cuclsiB081
CsaV3_1G002590Melon (DHL92) v3.5.1cucmeB005
CsaV3_1G002590Melon (DHL92) v3.5.1cucmeB026
CsaV3_1G002590Melon (DHL92) v3.6.1cucmedB005
CsaV3_1G002590Melon (DHL92) v3.6.1cucmedB024
CsaV3_1G002590Melon (DHL92) v3.6.1cucmedB050
CsaV3_1G002590Watermelon (Charleston Gray)cucwcgB064
CsaV3_1G002590Watermelon (Charleston Gray)cucwcgB070
CsaV3_1G002590Watermelon (Charleston Gray)cucwcgB088
CsaV3_1G002590Watermelon (97103) v1cucwmB044
CsaV3_1G002590Watermelon (97103) v1cucwmB071
CsaV3_1G002590Watermelon (97103) v1cucwmB105
CsaV3_1G002590Watermelon (97103) v2cucwmbB055
CsaV3_1G002590Watermelon (97103) v2cucwmbB059
CsaV3_1G002590Watermelon (97103) v2cucwmbB076