CsaV3_1G002010 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G002010
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 1314117 .. 1314509 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGCAACATATGCTGTCGTGAAGCAAGAATCAGCCAGAATGGAGAACTCTTACATGGTTCTGTCATTAAAGCCCCTAGTTCACTTGATGGAGAATAGAGTTCAGGGTTGGTCAAGTGCAAGAGAAAGGAGGTTCGTACTTTCAAAGCATAAACTAAAACGTAAGCAGGATATTCTTCTGCGATGCTTCCGTAGTTGGAAGCCCTTTACCATTACTATTTATTCATTGAGTTGTAAAGAAGTAAATAAGCTATTAAGCTATTTCTGTACTAGCAATCTGAGGAGAAGGAATGAATCTCTGCTAATCTTGTTCGCTACTCGAGTTGTTGCTTCCTCCTTTCCCATTTACTGCCATGTAAATAGTTGGCTATTATATTGCCTGATAGCGTGA

mRNA sequence

ATGCATGCAACATATGCTGTCGTGAAGCAAGAATCAGCCAGAATGGAGAACTCTTACATGGTTCTGTCATTAAAGCCCCTAGTTCACTTGATGGAGAATAGAGTTCAGGGTTGGTCAAGTGCAAGAGAAAGGAGGTTCGTACTTTCAAAGCATAAACTAAAACGTAAGCAGGATATTCTTCTGCGATGCTTCCGTAGTTGGAAGCCCTTTACCATTACTATTTATTCATTGAGTTGTAAAGAAGTAAATAAGCTATTAAGCTATTTCTGTACTAGCAATCTGAGGAGAAGGAATGAATCTCTGCTAATCTTGTTCGCTACTCGAGTTGTTGCTTCCTCCTTTCCCATTTACTGCCATGTAAATAGTTGGCTATTATATTGCCTGATAGCGTGA

Coding sequence (CDS)

ATGCATGCAACATATGCTGTCGTGAAGCAAGAATCAGCCAGAATGGAGAACTCTTACATGGTTCTGTCATTAAAGCCCCTAGTTCACTTGATGGAGAATAGAGTTCAGGGTTGGTCAAGTGCAAGAGAAAGGAGGTTCGTACTTTCAAAGCATAAACTAAAACGTAAGCAGGATATTCTTCTGCGATGCTTCCGTAGTTGGAAGCCCTTTACCATTACTATTTATTCATTGAGTTGTAAAGAAGTAAATAAGCTATTAAGCTATTTCTGTACTAGCAATCTGAGGAGAAGGAATGAATCTCTGCTAATCTTGTTCGCTACTCGAGTTGTTGCTTCCTCCTTTCCCATTTACTGCCATGTAAATAGTTGGCTATTATATTGCCTGATAGCGTGA

Protein sequence

MHATYAVVKQESARMENSYMVLSLKPLVHLMENRVQGWSSARERRFVLSKHKLKRKQDILLRCFRSWKPFTITIYSLSCKEVNKLLSYFCTSNLRRRNESLLILFATRVVASSFPIYCHVNSWLLYCLIA
BLAST of CsaV3_1G002010 vs. NCBI nr
Match: KGN63637.1 (hypothetical protein Csa_1G008445 [Cucumis sativus])

HSP 1 Score: 261.2 bits (666), Expect = 1.9e-66
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0

Query: 1   MHATYAVVKQESARMENSYMVLSLKPLVHLMENRVQGWSSARERRFVLSKHKLKRKQDIL 60
           MHATYAVVKQESARMENSYMVLSLKPLVHLMENRVQGWSSARERRFVLSKHKLKRKQDIL
Sbjct: 1   MHATYAVVKQESARMENSYMVLSLKPLVHLMENRVQGWSSARERRFVLSKHKLKRKQDIL 60

Query: 61  LRCFRSWKPFTITIYSLSCKEVNKLLSYFCTSNLRRRNESLLILFATRVVASSFPIYCHV 120
           LRCFRSWKPFTITIYSLSCKEVNKLLSYFCTSNLRRRNESLLILFATRVVASSFPIYCHV
Sbjct: 61  LRCFRSWKPFTITIYSLSCKEVNKLLSYFCTSNLRRRNESLLILFATRVVASSFPIYCHV 120

Query: 121 NSWLLYCLIA 131
           NSWLLYCLIA
Sbjct: 121 NSWLLYCLIA 130

BLAST of CsaV3_1G002010 vs. TrEMBL
Match: tr|A0A0A0LS79|A0A0A0LS79_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G008445 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.3e-66
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0

Query: 1   MHATYAVVKQESARMENSYMVLSLKPLVHLMENRVQGWSSARERRFVLSKHKLKRKQDIL 60
           MHATYAVVKQESARMENSYMVLSLKPLVHLMENRVQGWSSARERRFVLSKHKLKRKQDIL
Sbjct: 1   MHATYAVVKQESARMENSYMVLSLKPLVHLMENRVQGWSSARERRFVLSKHKLKRKQDIL 60

Query: 61  LRCFRSWKPFTITIYSLSCKEVNKLLSYFCTSNLRRRNESLLILFATRVVASSFPIYCHV 120
           LRCFRSWKPFTITIYSLSCKEVNKLLSYFCTSNLRRRNESLLILFATRVVASSFPIYCHV
Sbjct: 61  LRCFRSWKPFTITIYSLSCKEVNKLLSYFCTSNLRRRNESLLILFATRVVASSFPIYCHV 120

Query: 121 NSWLLYCLIA 131
           NSWLLYCLIA
Sbjct: 121 NSWLLYCLIA 130

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN63637.11.9e-66100.00hypothetical protein Csa_1G008445 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LS79|A0A0A0LS79_CUCSA1.3e-66100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G008445 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G002010.1CsaV3_1G002010.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G002010CsGy1G002010Cucumber (Gy14) v2cgybcucB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G002010Cucumber (Chinese Long) v3cuccucB002
CsaV3_1G002010Cucumber (Chinese Long) v3cuccucB035
CsaV3_1G002010Silver-seed gourdcarcucB0395
CsaV3_1G002010Silver-seed gourdcarcucB0530
CsaV3_1G002010Silver-seed gourdcarcucB0646
CsaV3_1G002010Silver-seed gourdcarcucB1047
CsaV3_1G002010Melon (DHL92) v3.5.1cucmeB053
CsaV3_1G002010Cucumber (Gy14) v2cgybcucB008
CsaV3_1G002010Cucumber (Gy14) v1cgycucB110
CsaV3_1G002010Cucumber (Gy14) v1cgycucB314
CsaV3_1G002010Cucumber (Gy14) v1cgycucB435
CsaV3_1G002010Cucumber (Gy14) v1cgycucB520
CsaV3_1G002010Cucurbita maxima (Rimu)cmacucB0058
CsaV3_1G002010Cucurbita maxima (Rimu)cmacucB0112
CsaV3_1G002010Cucurbita maxima (Rimu)cmacucB0239
CsaV3_1G002010Cucurbita maxima (Rimu)cmacucB0272
CsaV3_1G002010Cucurbita maxima (Rimu)cmacucB0478
CsaV3_1G002010Cucurbita maxima (Rimu)cmacucB0814
CsaV3_1G002010Cucurbita moschata (Rifu)cmocucB0044
CsaV3_1G002010Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G002010Cucurbita moschata (Rifu)cmocucB0094
CsaV3_1G002010Cucurbita moschata (Rifu)cmocucB0227
CsaV3_1G002010Cucurbita moschata (Rifu)cmocucB0261
CsaV3_1G002010Cucurbita moschata (Rifu)cmocucB0468
CsaV3_1G002010Cucurbita moschata (Rifu)cmocucB0798
CsaV3_1G002010Cucurbita pepo (Zucchini)cpecucB0023
CsaV3_1G002010Cucurbita pepo (Zucchini)cpecucB0442
CsaV3_1G002010Cucurbita pepo (Zucchini)cpecucB0470
CsaV3_1G002010Cucurbita pepo (Zucchini)cpecucB0638
CsaV3_1G002010Cucurbita pepo (Zucchini)cpecucB0740
CsaV3_1G002010Cucurbita pepo (Zucchini)cpecucB0814
CsaV3_1G002010Wild cucumber (PI 183967)cpicucB001
CsaV3_1G002010Wild cucumber (PI 183967)cpicucB012
CsaV3_1G002010Wild cucumber (PI 183967)cpicucB131
CsaV3_1G002010Wild cucumber (PI 183967)cpicucB254
CsaV3_1G002010Bottle gourd (USVL1VR-Ls)cuclsiB036
CsaV3_1G002010Bottle gourd (USVL1VR-Ls)cuclsiB081
CsaV3_1G002010Melon (DHL92) v3.5.1cucmeB005
CsaV3_1G002010Melon (DHL92) v3.5.1cucmeB015
CsaV3_1G002010Melon (DHL92) v3.6.1cucmedB005
CsaV3_1G002010Melon (DHL92) v3.6.1cucmedB013
CsaV3_1G002010Melon (DHL92) v3.6.1cucmedB064
CsaV3_1G002010Melon (DHL92) v3.6.1cucmedB050
CsaV3_1G002010Watermelon (Charleston Gray)cucwcgB006
CsaV3_1G002010Watermelon (Charleston Gray)cucwcgB017
CsaV3_1G002010Watermelon (Charleston Gray)cucwcgB070
CsaV3_1G002010Watermelon (Charleston Gray)cucwcgB088
CsaV3_1G002010Watermelon (97103) v1cucwmB044
CsaV3_1G002010Watermelon (97103) v1cucwmB061
CsaV3_1G002010Watermelon (97103) v1cucwmB105
CsaV3_1G002010Watermelon (97103) v2cucwmbB004
CsaV3_1G002010Watermelon (97103) v2cucwmbB059
CsaV3_1G002010Watermelon (97103) v2cucwmbB076
CsaV3_1G002010Wax gourdcucwgoB061
CsaV3_1G002010Wax gourdcucwgoB076
CsaV3_1G002010Wax gourdcucwgoB103