CsaV3_1G001950 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G001950
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionGermin
Locationchr1 : 1284885 .. 1285734 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCCTAGTTTCCTTCATTTTCCTTATCCTTCTTCCTCATCCTTCCTCGTCAACCGATCCCGACCCGTTGCAAGATTTCTGTGTTGCTGATCTAAATGCAACTGTTTCTGTTACTGGATTCCCCTGCAAACCAATTTCTGAAGTTACTGTTGATGACTTCTTTTATGATGGTTTAAGCAAAGAAGGCAACACAAAGAATCCATTTGGTTTTGGTCTTACACCAGGAAATGTTCATGCATTGCCTGGACTTAATACACTCGGTTTATCGATGAATCGTATCGATCTTGCTCCCGGTGGAATGAACCCTCCTCATTTGCATCCTCGAGCCTCCGAAATCGTTATCGTCCTTAAAGGGAGGGTTCTTGTTGGATTTTTGACAGTTGATAATGTGTATTATCATAAGGTTTTGAAGGTTGGGGAGCTGTTTATCATTCCTAGAGCACTAGTGCATTTTCAGTATAATGTTGGACGTAAGAAAGCAGTTGTGCTTGCAGGTTTCAATAGTCAGTTGCCAGGAGGCGTGCTCGTCGCCGGGAATTTGTTCGCTTCGAATCCTCCAATTCCCAATAAAATTCTGTCTAAGGCTTTACAAGTCAATGACGATGTTGTCAAAACCATCAAGTCCGATTTTATTCTTTAGGCATGTCACTCAAGTTTGGATTTACTTGTGAAGGCATTTTTGGGAGTGATTTTAAAAATGTTAAAATTATTTTTTTCATATTCAAAATGATTTTTTTAATAACTCAAAATCAAATATGTTGTATTAAAGTGATGTTATTTTGAAAGAATGAAAGATTATTTTTTAGTGTTTTTAACTATCTTAAAATTACTCTCAAACATACCTTTCG

mRNA sequence

ATGCTCCTAGTTTCCTTCATTTTCCTTATCCTTCTTCCTCATCCTTCCTCGTCAACCGATCCCGACCCGTTGCAAGATTTCTGTGTTGCTGATCTAAATGCAACTGTTTCTGTTACTGGATTCCCCTGCAAACCAATTTCTGAAGTTACTGTTGATGACTTCTTTTATGATGGTTTAAGCAAAGAAGGCAACACAAAGAATCCATTTGGTTTTGGTCTTACACCAGGAAATGTTCATGCATTGCCTGGACTTAATACACTCGGTTTATCGATGAATCGTATCGATCTTGCTCCCGGTGGAATGAACCCTCCTCATTTGCATCCTCGAGCCTCCGAAATCGTTATCGTCCTTAAAGGGAGGGTTCTTGTTGGATTTTTGACAGTTGATAATGTGTATTATCATAAGGTTTTGAAGGTTGGGGAGCTGTTTATCATTCCTAGAGCACTAGTGCATTTTCAGTATAATGTTGGACGTAAGAAAGCAGTTGTGCTTGCAGGTTTCAATAGTCAGTTGCCAGGAGGCGTGCTCGTCGCCGGGAATTTGTTCGCTTCGAATCCTCCAATTCCCAATAAAATTCTGTCTAAGGCTTTACAAGTCAATGACGATGTTGTCAAAACCATCAAGTCCGATTTTATTCTTTAG

Coding sequence (CDS)

ATGCTCCTAGTTTCCTTCATTTTCCTTATCCTTCTTCCTCATCCTTCCTCGTCAACCGATCCCGACCCGTTGCAAGATTTCTGTGTTGCTGATCTAAATGCAACTGTTTCTGTTACTGGATTCCCCTGCAAACCAATTTCTGAAGTTACTGTTGATGACTTCTTTTATGATGGTTTAAGCAAAGAAGGCAACACAAAGAATCCATTTGGTTTTGGTCTTACACCAGGAAATGTTCATGCATTGCCTGGACTTAATACACTCGGTTTATCGATGAATCGTATCGATCTTGCTCCCGGTGGAATGAACCCTCCTCATTTGCATCCTCGAGCCTCCGAAATCGTTATCGTCCTTAAAGGGAGGGTTCTTGTTGGATTTTTGACAGTTGATAATGTGTATTATCATAAGGTTTTGAAGGTTGGGGAGCTGTTTATCATTCCTAGAGCACTAGTGCATTTTCAGTATAATGTTGGACGTAAGAAAGCAGTTGTGCTTGCAGGTTTCAATAGTCAGTTGCCAGGAGGCGTGCTCGTCGCCGGGAATTTGTTCGCTTCGAATCCTCCAATTCCCAATAAAATTCTGTCTAAGGCTTTACAAGTCAATGACGATGTTGTCAAAACCATCAAGTCCGATTTTATTCTTTAG

Protein sequence

MLLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLSKEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGRVLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGNLFASNPPIPNKILSKALQVNDDVVKTIKSDFIL
Homology
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BLAST of CsaV3_1G001950 vs. NCBI nr
Match: XP_004138293.1 (PREDICTED: germin-like protein subfamily T member 1 [Cucumis sativus] >KGN63631.1 hypothetical protein Csa_1G007900 [Cucumis sativus])

HSP 1 Score: 429.9 bits (1104), Expect = 5.2e-117
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 

Query: 1   MLLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLS 60
           MLLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLS
Sbjct: 1   MLLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLS 60

Query: 61  KEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR 120
           KEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR
Sbjct: 61  KEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR 120

Query: 121 VLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGN 180
           VLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGN
Sbjct: 121 VLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGN 180

Query: 181 LFASNPPIPNKILSKALQVNDDVVKTIKSDFIL 214
           LFASNPPIPNKILSKALQVNDDVVKTIKSDFIL
Sbjct: 181 LFASNPPIPNKILSKALQVNDDVVKTIKSDFIL 213

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BLAST of CsaV3_1G001950 vs. NCBI nr
Match: XP_008453674.2 (PREDICTED: germin-like protein subfamily T member 1 [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 3.7e-107
Identity = 195/213 (91.55%), Postives = 205/213 (96.24%), Query Frame = 0 

Query: 1   MLLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLS 60
           MLL+SFI  ILLP+PS STDPDPLQDFCVADLNATVSV+GFPCKPIS+VTV+DFF+DGLS
Sbjct: 9   MLLISFIIFILLPYPSISTDPDPLQDFCVADLNATVSVSGFPCKPISKVTVEDFFFDGLS 68

Query: 61  KEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR 120
           KEGNTKNPFGFGLTPGNV  LPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR
Sbjct: 69  KEGNTKNPFGFGLTPGNVLKLPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR 128

Query: 121 VLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGN 180
           VLVGFLTVDNVYYHKVLKVGE+FIIPRALVHFQYNVG +KAVVLAGFNSQLPGGVLVAGN
Sbjct: 129 VLVGFLTVDNVYYHKVLKVGEVFIIPRALVHFQYNVGHRKAVVLAGFNSQLPGGVLVAGN 188

Query: 181 LFASNPPIPNKILSKALQVNDDVVKTIKSDFIL 214
           LFASNPPIPN ILSKAL VN+DV+KTIKSDFIL
Sbjct: 189 LFASNPPIPNVILSKALLVNEDVIKTIKSDFIL 221

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BLAST of CsaV3_1G001950 vs. NCBI nr
Match: XP_008453157.1 (PREDICTED: germin-like protein subfamily T member 2 [Cucumis melo])

HSP 1 Score: 320.1 bits (819), Expect = 5.8e-84
Identity = 150/210 (71.43%), Postives = 176/210 (83.81%), Query Frame = 0 

Query: 2   LLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLSK 61
           +LV F  L+LLP+PS S DPDPLQDFCV DLNATVS+ GFPCKP+SEVT DDFF+DGLSK
Sbjct: 11  MLVCFTILLLLPYPSLSADPDPLQDFCVGDLNATVSLNGFPCKPVSEVTADDFFFDGLSK 70

Query: 62  EGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGRV 121
           EGNT NPFGFG+T GNV A PGLNTLGLSMNR+DLAPGG+N PH HPRASE ++V+KG+V
Sbjct: 71  EGNTDNPFGFGVTQGNVLAFPGLNTLGLSMNRVDLAPGGINAPHSHPRASESIVVIKGKV 130

Query: 122 LVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGNL 181
           LVGF++  NVYY KVL VG++FI+PR LVHFQYNVGR KA+++  FNSQLPG V+V+  L
Sbjct: 131 LVGFVSTSNVYYSKVLTVGQMFIVPRGLVHFQYNVGRGKAILITAFNSQLPGAVVVSRTL 190

Query: 182 FASNPPIPNKILSKALQVNDDVVKTIKSDF 212
           FASNPPIP KIL+K  QV+  V+  IKS F
Sbjct: 191 FASNPPIPVKILTKTFQVDASVINGIKSRF 220

[Close]
BLAST of CsaV3_1G001950 vs. NCBI nr
Match: XP_023516405.1 (germin-like protein subfamily T member 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.0 bits (811), Expect = 4.9e-83
Identity = 151/210 (71.90%), Postives = 175/210 (83.33%), Query Frame = 0 

Query: 2   LLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLSK 61
           +L   I L+LLP+PS S DPDPLQDFCVADLNATVS+ GFPCKP+SEVT DDFF+DGLSK
Sbjct: 11  MLGCLIILLLLPYPSLSADPDPLQDFCVADLNATVSLNGFPCKPVSEVTSDDFFFDGLSK 70

Query: 62  EGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGRV 121
           EGNT NPFGFG T GNV A PGLNTLGLSMNR+DLA GG+N PH HPRASE V+V+KG+V
Sbjct: 71  EGNTDNPFGFGATQGNVLAFPGLNTLGLSMNRVDLARGGINAPHSHPRASESVVVIKGKV 130

Query: 122 LVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGNL 181
           LVGF++  NVYY+KVL  GE+FIIPR LVHFQYNVG  KA++L  FNSQLPG V+V+  L
Sbjct: 131 LVGFVSTSNVYYYKVLTEGEMFIIPRGLVHFQYNVGHSKAILLTAFNSQLPGAVIVSRTL 190

Query: 182 FASNPPIPNKILSKALQVNDDVVKTIKSDF 212
           FASNPPIP +IL+K  QV+D V+ +IKS F
Sbjct: 191 FASNPPIPLEILTKTFQVDDGVINSIKSKF 220

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BLAST of CsaV3_1G001950 vs. NCBI nr
Match: XP_023531852.1 (germin-like protein subfamily T member 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.7 bits (805), Expect = 2.4e-82
Identity = 143/210 (68.10%), Postives = 178/210 (84.76%), Query Frame = 0 

Query: 2   LLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLSK 61
           +L  FI L+LLP+ S S DPDPLQDFCVADLNATVS+ GFPCKP++EVT DDFF+DGLSK
Sbjct: 11  MLGCFIILLLLPYHSLSADPDPLQDFCVADLNATVSLNGFPCKPVAEVTSDDFFFDGLSK 70

Query: 62  EGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGRV 121
           EGNT NPFGF +  GNV + PGLNTLG+SMNR+DLAPGG+N PH HPRA+E ++V+KG+V
Sbjct: 71  EGNTDNPFGFAVAQGNVLSFPGLNTLGISMNRVDLAPGGINAPHSHPRATESIVVIKGKV 130

Query: 122 LVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGNL 181
           LVGF++  NVY++KVL VG++F+IPR L+HFQYNVG  KA++L  FNSQLPG V+V+  L
Sbjct: 131 LVGFVSTSNVYFYKVLTVGQMFVIPRGLIHFQYNVGHSKAILLTAFNSQLPGAVIVSRTL 190

Query: 182 FASNPPIPNKILSKALQVNDDVVKTIKSDF 212
           FASNPPIPN+IL+K  +V+DDV+ +IKS F
Sbjct: 191 FASNPPIPNQILTKTFRVDDDVINSIKSKF 220

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BLAST of CsaV3_1G001950 vs. TAIR10
Match: AT1G18970.1 (germin-like protein 4)

HSP 1 Score: 235.7 bits (600), Expect = 2.6e-62
Identity = 115/211 (54.50%), Postives = 148/211 (70.14%), Query Frame = 0 

Query: 2   LLVSFIFLI-LLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLS 61
           LL SF+ +  L   PS S+D DPLQDFCV DL A+ S+ GFPCK  S V+  DFFY GL 
Sbjct: 10  LLRSFLLMFCLFVIPSLSSDSDPLQDFCVGDLKASASINGFPCK--SAVSASDFFYSGLG 69

Query: 62  KEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR 121
              +T NP G  + P NV   PGLNTLG+SMN ++LAPGG+NPPHLHPRA+E+  V++G 
Sbjct: 70  GPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGS 129

Query: 122 VLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGN 181
           V VGFL+ +N  + KVL  GE F+IPR LVHFQ+NVG+ KA ++  FNSQLPG V++   
Sbjct: 130 VFVGFLSTNNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPST 189

Query: 182 LFASNPPIPNKILSKALQVNDDVVKTIKSDF 212
           LF S P IPN +L++A + +D  V+ +KS F
Sbjct: 190 LFGSKPEIPNAVLTRAFRTDDTTVQNLKSKF 218

[Close]
BLAST of CsaV3_1G001950 vs. TAIR10
Match: AT1G18980.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-61
Identity = 113/210 (53.81%), Postives = 145/210 (69.05%), Query Frame = 0 

Query: 2   LLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLSK 61
           LLV  +F+I    PS S+D DPLQDFCV DL A+ S+ GFPCK  S V+  DFF+ GL  
Sbjct: 15  LLVICVFVI----PSLSSDSDPLQDFCVGDLKASPSINGFPCK--SSVSASDFFFSGLGG 74

Query: 62  EGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGRV 121
             NT  P G  ++P NV   PGLNTLGLSMN ++ APGG+NPPH HPRA+E  +V++G V
Sbjct: 75  PLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSV 134

Query: 122 LVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGNL 181
            VGFLT +N  + KVL  GE+F++PR LVHFQ+NVG+ KA ++  FNSQLPG  ++   L
Sbjct: 135 FVGFLTTNNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTL 194

Query: 182 FASNPPIPNKILSKALQVNDDVVKTIKSDF 212
           F SNP IPN +L+K  + +D  V  +KS F
Sbjct: 195 FGSNPTIPNAVLTKTFRTDDVTVNKLKSKF 218

[Close]
BLAST of CsaV3_1G001950 vs. TAIR10
Match: AT1G09560.1 (germin-like protein 5)

HSP 1 Score: 214.5 bits (545), Expect = 6.2e-56
Identity = 111/211 (52.61%), Postives = 139/211 (65.88%), Query Frame = 0 

Query: 1   MLLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLS 60
           +LL +  F I     SSS DPD LQD CVADL + + + GFPCK  + VT  DFF  GL+
Sbjct: 10  LLLTTVSFFI-----SSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLA 69

Query: 61  KEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR 120
           K G T N FG  +T  NV  +PGLNTLG+S++RID APGG+NPPH HPRA+E+V VL+G 
Sbjct: 70  KPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGT 129

Query: 121 VLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGN 180
           + VGFLT  N    + LK G++F  P+ LVHFQ N G   A V+A FNSQLPG   +   
Sbjct: 130 LDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGAT 189

Query: 181 LFASNPPIPNKILSKALQVNDDVVKTIKSDF 212
           LF S PP+P+ IL++A Q +   VK IKS F
Sbjct: 190 LFGSTPPVPDNILAQAFQTSPGTVKHIKSKF 215

[Close]
BLAST of CsaV3_1G001950 vs. TAIR10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor)

HSP 1 Score: 203.0 bits (515), Expect = 1.9e-52
Identity = 96/189 (50.79%), Postives = 124/189 (65.61%), Query Frame = 0 

Query: 20  DPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLSKEGNTKNPFGFGLTPGNVH 79
           DPD LQD CVAD +    + GFPCK    +T  DFF+ G+SK     +  G  +T  NV 
Sbjct: 24  DPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVE 83

Query: 80  ALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGRVLVGFLTVDNVYYHKVLKV 139
            +PGLNTL +S+ RID APGG+NPPH HPRA+E+V VL+G + VGF+T  N  + K +K+
Sbjct: 84  KIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTIKI 143

Query: 140 GELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGNLFASNPPIPNKILSKALQV 199
           GE+F+ PR LVHFQ N G+  A VL+ FNSQLPG   VA  LFA+ P +P  +L+K  QV
Sbjct: 144 GEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQV 203

Query: 200 NDDVVKTIK 209
              +V  IK
Sbjct: 204 GSKMVDKIK 212

[Close]
BLAST of CsaV3_1G001950 vs. TAIR10
Match: AT3G05930.1 (germin-like protein 8)

HSP 1 Score: 197.6 bits (501), Expect = 7.8e-51
Identity = 99/207 (47.83%), Postives = 137/207 (66.18%), Query Frame = 0 

Query: 6   FIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLSKEGNT 65
           F+  +L+    +  D + LQDFCVADL+  + V G+PCK  ++VT +DF++ GL+    T
Sbjct: 9   FVTFMLVAAHMALADTNMLQDFCVADLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAAT 68

Query: 66  KN-PFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGRVLVG 125
            N   G  +T  NV  +PGLNTLG+S++RID APGG+NPPHLHPRASE + VL+GR+ VG
Sbjct: 69  ANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVG 128

Query: 126 FLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGNLFAS 185
           FLT       K +  G++F+ P+AL+HFQ N  +  A VLA F+SQLPG  +V  +LF S
Sbjct: 129 FLTTTGKLISKHVNKGDVFVFPKALLHFQQNPNKAPASVLAAFDSQLPGTQVVGPSLFGS 188

Query: 186 NPPIPNKILSKALQVNDDVVKTIKSDF 212
           NPPIP+ +L+KA       ++ IK  F
Sbjct: 189 NPPIPDDLLAKAFGAAAPEIQKIKGKF 215

[Close]
BLAST of CsaV3_1G001950 vs. Swiss-Prot
Match: sp|P92995|GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP1 PE=2 SV=2)

HSP 1 Score: 235.7 bits (600), Expect = 4.7e-61
Identity = 115/211 (54.50%), Postives = 148/211 (70.14%), Query Frame = 0 

Query: 2   LLVSFIFLI-LLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLS 61
           LL SF+ +  L   PS S+D DPLQDFCV DL A+ S+ GFPCK  S V+  DFFY GL 
Sbjct: 10  LLRSFLLMFCLFVIPSLSSDSDPLQDFCVGDLKASASINGFPCK--SAVSASDFFYSGLG 69

Query: 62  KEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR 121
              +T NP G  + P NV   PGLNTLG+SMN ++LAPGG+NPPHLHPRA+E+  V++G 
Sbjct: 70  GPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGS 129

Query: 122 VLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGN 181
           V VGFL+ +N  + KVL  GE F+IPR LVHFQ+NVG+ KA ++  FNSQLPG V++   
Sbjct: 130 VFVGFLSTNNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPST 189

Query: 182 LFASNPPIPNKILSKALQVNDDVVKTIKSDF 212
           LF S P IPN +L++A + +D  V+ +KS F
Sbjct: 190 LFGSKPEIPNAVLTRAFRTDDTTVQNLKSKF 218

[Close]
BLAST of CsaV3_1G001950 vs. Swiss-Prot
Match: sp|Q9LMC9|GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana OX=3702 GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.3e-60
Identity = 113/210 (53.81%), Postives = 145/210 (69.05%), Query Frame = 0 

Query: 2   LLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLSK 61
           LLV  +F+I    PS S+D DPLQDFCV DL A+ S+ GFPCK  S V+  DFF+ GL  
Sbjct: 15  LLVICVFVI----PSLSSDSDPLQDFCVGDLKASPSINGFPCK--SSVSASDFFFSGLGG 74

Query: 62  EGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGRV 121
             NT  P G  ++P NV   PGLNTLGLSMN ++ APGG+NPPH HPRA+E  +V++G V
Sbjct: 75  PLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSV 134

Query: 122 LVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGNL 181
            VGFLT +N  + KVL  GE+F++PR LVHFQ+NVG+ KA ++  FNSQLPG  ++   L
Sbjct: 135 FVGFLTTNNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTL 194

Query: 182 FASNPPIPNKILSKALQVNDDVVKTIKSDF 212
           F SNP IPN +L+K  + +D  V  +KS F
Sbjct: 195 FGSNPTIPNAVLTKTFRTDDVTVNKLKSKF 218

[Close]
BLAST of CsaV3_1G001950 vs. Swiss-Prot
Match: sp|Q6I544|GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.0e-57
Identity = 110/207 (53.14%), Postives = 145/207 (70.05%), Query Frame = 0 

Query: 3   LVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLSKE 62
           +V+ + L LLP PS++ DPD LQD CVADL + V V GF CK  + VT DDF++ GL+  
Sbjct: 10  VVAVLLLALLPTPSTAGDPDLLQDICVADLTSAVKVNGFACK--AAVTEDDFYFKGLAAA 69

Query: 63  GNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGRVL 122
           GNT N +G  +T  NV  LPGLNTLG+SM+RID APGG+NPPH HPRA+E+V VL+G + 
Sbjct: 70  GNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLD 129

Query: 123 VGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGNLF 182
           VGF+T  N  Y K +  G++F+ PR L+HFQ N G   A V++ FNSQLPG   +A  LF
Sbjct: 130 VGFITTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLF 189

Query: 183 ASNPPIPNKILSKALQVNDDVVKTIKS 210
           A++P +P+ +L+KA QV    V+ IKS
Sbjct: 190 AASPEVPDGVLTKAFQVGTKEVEKIKS 214

[Close]
BLAST of CsaV3_1G001950 vs. Swiss-Prot
Match: sp|Q10BU2|GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica OX=39947 GN=GER7 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.6e-56
Identity = 109/214 (50.93%), Postives = 147/214 (68.69%), Query Frame = 0 

Query: 2   LLVSFIFLILLPHPSSSTDPDPLQDFCV----ADLNATVSVTGFPCKPISEVTVDDFFYD 61
           LLV  + ++ +   + + DP+P+QDFCV    A   A+ +  GFPCKP S V  DDFF+ 
Sbjct: 18  LLVLTVAVLAVLASTCAADPEPIQDFCVAVPRAGGEASPAYPGFPCKPASAVVSDDFFFA 77

Query: 62  GLSKEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVL 121
           GL+  G+T NPFG  L PGNV A P LNTLG+++NR+DLAPGG+NP H HPRA+E+V V+
Sbjct: 78  GLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVI 137

Query: 122 KGRVLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLV 181
            GR+LVGF++    YY KV+  GE F IPR L+HFQYN G   A  +  FNSQLPG V  
Sbjct: 138 TGRMLVGFVSTAGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPA 197

Query: 182 AGNLFASNPPIPNKILSKALQVNDDVVKTIKSDF 212
           A  LF ++P IP+ +L+K+ QV+ +++K +KS F
Sbjct: 198 ATALFGADPEIPDAVLAKSFQVDAEIIKLLKSKF 231

[Close]
BLAST of CsaV3_1G001950 vs. Swiss-Prot
Match: sp|P45851|OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.5e-56
Identity = 116/214 (54.21%), Postives = 148/214 (69.16%), Query Frame = 0 

Query: 2   LLVSFIFLILLPHPSSSTDPDPLQDFCVADLNA-TVSVTGFPCKPISEVTVDDFFYDGLS 61
           L VS   ++LL     ++DPDPLQDFCVADL+   VSV G PCKP+SE   D  F   L+
Sbjct: 7   LAVSLFAVLLLAPAVLASDPDPLQDFCVADLDGKAVSVNGHPCKPMSEAGDDFLFSSKLA 66

Query: 62  KEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR 121
           K GNT  P G  +T  +V   PG NTLG+SMNR+D APGG NPPH+HPRA+EI IV+KG 
Sbjct: 67  KAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGE 126

Query: 122 VLVGFL-TVD--NVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLV 181
           +LVG L ++D  N  Y +V++ GE F+IPR L+HFQ+NVG+ +A ++  FNSQ PG V V
Sbjct: 127 LLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFV 186

Query: 182 AGNLFASNPPIPNKILSKALQVNDDVVKTIKSDF 212
              LF SNPPIP  +L+KAL+V   VV+ +KS F
Sbjct: 187 PLTLFGSNPPIPTPVLTKALRVEAGVVELLKSKF 220

[Close]
BLAST of CsaV3_1G001950 vs. TrEMBL
Match: tr|A0A0A0LUD9|A0A0A0LUD9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G007900 PE=3 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 3.4e-117
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 

Query: 1   MLLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLS 60
           MLLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLS
Sbjct: 1   MLLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLS 60

Query: 61  KEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR 120
           KEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR
Sbjct: 61  KEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR 120

Query: 121 VLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGN 180
           VLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGN
Sbjct: 121 VLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGN 180

Query: 181 LFASNPPIPNKILSKALQVNDDVVKTIKSDFIL 214
           LFASNPPIPNKILSKALQVNDDVVKTIKSDFIL
Sbjct: 181 LFASNPPIPNKILSKALQVNDDVVKTIKSDFIL 213

[Close]
BLAST of CsaV3_1G001950 vs. TrEMBL
Match: tr|A0A1S3BWX7|A0A1S3BWX7_CUCME (germin-like protein subfamily T member 1 OS=Cucumis melo OX=3656 GN=LOC103494323 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 2.5e-107
Identity = 195/213 (91.55%), Postives = 205/213 (96.24%), Query Frame = 0 

Query: 1   MLLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLS 60
           MLL+SFI  ILLP+PS STDPDPLQDFCVADLNATVSV+GFPCKPIS+VTV+DFF+DGLS
Sbjct: 9   MLLISFIIFILLPYPSISTDPDPLQDFCVADLNATVSVSGFPCKPISKVTVEDFFFDGLS 68

Query: 61  KEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR 120
           KEGNTKNPFGFGLTPGNV  LPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR
Sbjct: 69  KEGNTKNPFGFGLTPGNVLKLPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGR 128

Query: 121 VLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGN 180
           VLVGFLTVDNVYYHKVLKVGE+FIIPRALVHFQYNVG +KAVVLAGFNSQLPGGVLVAGN
Sbjct: 129 VLVGFLTVDNVYYHKVLKVGEVFIIPRALVHFQYNVGHRKAVVLAGFNSQLPGGVLVAGN 188

Query: 181 LFASNPPIPNKILSKALQVNDDVVKTIKSDFIL 214
           LFASNPPIPN ILSKAL VN+DV+KTIKSDFIL
Sbjct: 189 LFASNPPIPNVILSKALLVNEDVIKTIKSDFIL 221

[Close]
BLAST of CsaV3_1G001950 vs. TrEMBL
Match: tr|A0A1S3BWP4|A0A1S3BWP4_CUCME (germin-like protein subfamily T member 2 OS=Cucumis melo OX=3656 GN=LOC103493955 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 3.8e-84
Identity = 150/210 (71.43%), Postives = 176/210 (83.81%), Query Frame = 0 

Query: 2   LLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLSK 61
           +LV F  L+LLP+PS S DPDPLQDFCV DLNATVS+ GFPCKP+SEVT DDFF+DGLSK
Sbjct: 11  MLVCFTILLLLPYPSLSADPDPLQDFCVGDLNATVSLNGFPCKPVSEVTADDFFFDGLSK 70

Query: 62  EGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGRV 121
           EGNT NPFGFG+T GNV A PGLNTLGLSMNR+DLAPGG+N PH HPRASE ++V+KG+V
Sbjct: 71  EGNTDNPFGFGVTQGNVLAFPGLNTLGLSMNRVDLAPGGINAPHSHPRASESIVVIKGKV 130

Query: 122 LVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGNL 181
           LVGF++  NVYY KVL VG++FI+PR LVHFQYNVGR KA+++  FNSQLPG V+V+  L
Sbjct: 131 LVGFVSTSNVYYSKVLTVGQMFIVPRGLVHFQYNVGRGKAILITAFNSQLPGAVVVSRTL 190

Query: 182 FASNPPIPNKILSKALQVNDDVVKTIKSDF 212
           FASNPPIP KIL+K  QV+  V+  IKS F
Sbjct: 191 FASNPPIPVKILTKTFQVDASVINGIKSRF 220

[Close]
BLAST of CsaV3_1G001950 vs. TrEMBL
Match: tr|A0A0A0LP04|A0A0A0LP04_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G007890 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 8.0e-82
Identity = 145/210 (69.05%), Postives = 176/210 (83.81%), Query Frame = 0 

Query: 2   LLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLSK 61
           +LV FI L+LLP+PS S DPDPLQDFCVADLNATVS+ GFPCKP SEVT DDFF+DGLSK
Sbjct: 11  MLVCFIILLLLPYPSLSADPDPLQDFCVADLNATVSLNGFPCKPASEVTADDFFFDGLSK 70

Query: 62  EGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGRV 121
           EGNT NPFGFG+T GNV   PGLNTLGLSMNR+DLA GG+N PH HPRA+E ++V+KG+V
Sbjct: 71  EGNTDNPFGFGVTQGNVLTFPGLNTLGLSMNRVDLARGGINAPHSHPRATESIVVIKGKV 130

Query: 122 LVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGNL 181
           LVGF++  +VYY+KVL VG++F++PR LVHFQYNVG  KA ++  FNSQLPG V+V+  L
Sbjct: 131 LVGFVSTSSVYYYKVLTVGQMFVVPRGLVHFQYNVGHGKATLITAFNSQLPGAVVVSRTL 190

Query: 182 FASNPPIPNKILSKALQVNDDVVKTIKSDF 212
           FASNPP+P +IL+KA QV+  V+ +IKS F
Sbjct: 191 FASNPPLPVEILTKAFQVDASVINSIKSKF 220

[Close]
BLAST of CsaV3_1G001950 vs. TrEMBL
Match: tr|A0A2P5EKM1|A0A2P5EKM1_9ROSA (Germin OS=Trema orientalis OX=63057 GN=TorRG33x02_181670 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.9e-76
Identity = 138/210 (65.71%), Postives = 165/210 (78.57%), Query Frame = 0 

Query: 2   LLVSFIFLILLPHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLSK 61
           LL   + L+  P PS STDPDPLQDFCVADLNAT SV G+PCKPIS+VT +DFF+DGLSK
Sbjct: 11  LLFCLLVLVFTPFPSHSTDPDPLQDFCVADLNATFSVNGYPCKPISQVTSEDFFFDGLSK 70

Query: 62  EGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKGRV 121
           EGNT N FG G+T GNV   PGLNTLG+SMNR D APGG+NPPH HPRA+E  +V+KG+V
Sbjct: 71  EGNTSNIFGIGVTLGNVQTFPGLNTLGISMNRADFAPGGVNPPHTHPRATESGVVIKGKV 130

Query: 122 LVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAGNL 181
           LVGF+T DNV Y KVL  G++F+IPR LVHFQ NVG  KA++L  FNSQLPG  LV  +L
Sbjct: 131 LVGFVTTDNVLYSKVLTAGQMFVIPRGLVHFQLNVGPGKALILVAFNSQLPGIALVPTSL 190

Query: 182 FASNPPIPNKILSKALQVNDDVVKTIKSDF 212
           FA+ PP+ N++L+KA QV D+V+  IKS F
Sbjct: 191 FATTPPVQNQVLTKAFQVGDEVINVIKSKF 220

The following BLAST results are available for this feature:
BLAST of CsaV3_1G001950 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138293.15.2e-117100.00PREDICTED: germin-like protein subfamily T member 1 [Cucumis sativus] >KGN63631.... [more]
XP_008453674.23.7e-10791.55PREDICTED: germin-like protein subfamily T member 1 [Cucumis melo][more]
XP_008453157.15.8e-8471.43PREDICTED: germin-like protein subfamily T member 2 [Cucumis melo][more]
XP_023516405.14.9e-8371.90germin-like protein subfamily T member 2 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_023531852.12.4e-8268.10germin-like protein subfamily T member 2 isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_1G001950 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G18970.12.6e-6254.50germin-like protein 4[more]
AT1G18980.11.3e-6153.81RmlC-like cupins superfamily protein[more]
AT1G09560.16.2e-5652.61germin-like protein 5[more]
AT1G02335.11.9e-5250.79germin-like protein subfamily 2 member 2 precursor[more]
AT3G05930.17.8e-5147.83germin-like protein 8[more]
BLAST of CsaV3_1G001950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P92995|GLT1_ARATH4.7e-6154.50Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP1... [more]
sp|Q9LMC9|GLT2_ARATH2.3e-6053.81Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana OX=3702 GN=At1g... [more]
sp|Q6I544|GL52_ORYSJ7.0e-5753.14Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500... [more]
sp|Q10BU2|GL37_ORYSJ1.6e-5650.93Germin-like protein 3-7 OS=Oryza sativa subsp. japonica OX=39947 GN=GER7 PE=2 SV... [more]
sp|P45851|OXO2_HORVU4.5e-5654.21Oxalate oxidase 2 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
BLAST of CsaV3_1G001950 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LUD9|A0A0A0LUD9_CUCSA3.4e-117100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G007900 PE=3 SV=1[more]
tr|A0A1S3BWX7|A0A1S3BWX7_CUCME2.5e-10791.55germin-like protein subfamily T member 1 OS=Cucumis melo OX=3656 GN=LOC103494323... [more]
tr|A0A1S3BWP4|A0A1S3BWP4_CUCME3.8e-8471.43germin-like protein subfamily T member 2 OS=Cucumis melo OX=3656 GN=LOC103493955... [more]
tr|A0A0A0LP04|A0A0A0LP04_CUCSA8.0e-8269.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G007890 PE=3 SV=1[more]
tr|A0A2P5EKM1|A0A2P5EKM1_9ROSA2.9e-7665.71Germin OS=Trema orientalis OX=63057 GN=TorRG33x02_181670 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0045735nutrient reservoir activity
GO:0030145manganese ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011051RmlC_Cupin_sf
IPR019780Germin_Mn-BS
IPR014710RmlC-like_jellyroll
IPR006045Cupin_1
IPR001929Germin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0045735 nutrient reservoir activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G001950.1CsaV3_1G001950.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 168..183
score: 42.88
coord: 105..125
score: 57.59
coord: 135..155
score: 48.28
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 57..205
e-value: 1.0E-30
score: 118.0
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 59..203
e-value: 5.0E-39
score: 133.2
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 19..212
e-value: 2.7E-77
score: 260.8
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 3..211
NoneNo IPR availablePANTHERPTHR31238:SF46GERMIN-LIKE PROTEIN SUBFAMILY T MEMBER 1-RELATEDcoord: 3..211
IPR019780Germin, manganese binding sitePROSITEPS00725GERMINcoord: 100..113
IPR011051RmlC-like cupin domain superfamilySUPERFAMILYSSF51182RmlC-like cupinscoord: 20..210

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G001950Cucumber (Chinese Long) v3cuccucB002
CsaV3_1G001950Cucumber (Chinese Long) v3cuccucB025
CsaV3_1G001950Cucumber (Chinese Long) v3cuccucB035
CsaV3_1G001950Silver-seed gourdcarcucB0395
CsaV3_1G001950Silver-seed gourdcarcucB0530
CsaV3_1G001950Silver-seed gourdcarcucB0646
CsaV3_1G001950Silver-seed gourdcarcucB1047
CsaV3_1G001950Melon (DHL92) v3.5.1cucmeB053
CsaV3_1G001950Cucumber (Gy14) v2cgybcucB002
CsaV3_1G001950Cucumber (Gy14) v2cgybcucB008
CsaV3_1G001950Cucumber (Gy14) v1cgycucB110
CsaV3_1G001950Cucumber (Gy14) v1cgycucB314
CsaV3_1G001950Cucumber (Gy14) v1cgycucB435
CsaV3_1G001950Cucumber (Gy14) v1cgycucB520
CsaV3_1G001950Cucurbita maxima (Rimu)cmacucB0058
CsaV3_1G001950Cucurbita maxima (Rimu)cmacucB0112
CsaV3_1G001950Cucurbita maxima (Rimu)cmacucB0239
CsaV3_1G001950Cucurbita maxima (Rimu)cmacucB0272
CsaV3_1G001950Cucurbita maxima (Rimu)cmacucB0478
CsaV3_1G001950Cucurbita maxima (Rimu)cmacucB0814
CsaV3_1G001950Cucurbita moschata (Rifu)cmocucB0044
CsaV3_1G001950Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G001950Cucurbita moschata (Rifu)cmocucB0094
CsaV3_1G001950Cucurbita moschata (Rifu)cmocucB0227
CsaV3_1G001950Cucurbita moschata (Rifu)cmocucB0261
CsaV3_1G001950Cucurbita moschata (Rifu)cmocucB0468
CsaV3_1G001950Cucurbita moschata (Rifu)cmocucB0798
CsaV3_1G001950Cucurbita pepo (Zucchini)cpecucB0023
CsaV3_1G001950Cucurbita pepo (Zucchini)cpecucB0442
CsaV3_1G001950Cucurbita pepo (Zucchini)cpecucB0470
CsaV3_1G001950Cucurbita pepo (Zucchini)cpecucB0638
CsaV3_1G001950Cucurbita pepo (Zucchini)cpecucB0740
CsaV3_1G001950Cucurbita pepo (Zucchini)cpecucB0814
CsaV3_1G001950Wild cucumber (PI 183967)cpicucB001
CsaV3_1G001950Wild cucumber (PI 183967)cpicucB012
CsaV3_1G001950Wild cucumber (PI 183967)cpicucB131
CsaV3_1G001950Wild cucumber (PI 183967)cpicucB254
CsaV3_1G001950Bottle gourd (USVL1VR-Ls)cuclsiB036
CsaV3_1G001950Bottle gourd (USVL1VR-Ls)cuclsiB049
CsaV3_1G001950Bottle gourd (USVL1VR-Ls)cuclsiB081
CsaV3_1G001950Melon (DHL92) v3.5.1cucmeB005
CsaV3_1G001950Melon (DHL92) v3.5.1cucmeB015
CsaV3_1G001950Melon (DHL92) v3.6.1cucmedB005
CsaV3_1G001950Melon (DHL92) v3.6.1cucmedB013
CsaV3_1G001950Melon (DHL92) v3.6.1cucmedB064
CsaV3_1G001950Melon (DHL92) v3.6.1cucmedB050
CsaV3_1G001950Watermelon (Charleston Gray)cucwcgB006
CsaV3_1G001950Watermelon (Charleston Gray)cucwcgB017
CsaV3_1G001950Watermelon (Charleston Gray)cucwcgB070
CsaV3_1G001950Watermelon (Charleston Gray)cucwcgB088
CsaV3_1G001950Watermelon (97103) v1cucwmB044
CsaV3_1G001950Watermelon (97103) v1cucwmB061
CsaV3_1G001950Watermelon (97103) v1cucwmB105
CsaV3_1G001950Watermelon (97103) v2cucwmbB004
CsaV3_1G001950Watermelon (97103) v2cucwmbB059
CsaV3_1G001950Watermelon (97103) v2cucwmbB076
CsaV3_1G001950Wax gourdcucwgoB061
CsaV3_1G001950Wax gourdcucwgoB076
CsaV3_1G001950Wax gourdcucwgoB103